AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0606360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606360 MtrunA17_Chr4g0036001 97.712 874 19 1 1 873 1 874 0.0 1764
Msa0606360 MtrunA17_Chr5g0405181 60.579 553 152 9 1 493 1 547 0.0 632
Msa0606360 MtrunA17_Chr5g0405181 44.781 297 139 6 575 865 669 946 3.74e-65 236
Msa0606360 MtrunA17_Chr8g0372171 71.034 435 117 3 1 431 1 430 0.0 625
Msa0606360 MtrunA17_Chr8g0372171 36.864 236 113 8 548 765 813 1030 2.10e-27 119
Msa0606360 MtrunA17_Chr3g0142261 62.708 421 145 4 19 438 14 423 1.59e-166 523
Msa0606360 MtrunA17_Chr3g0142261 38.113 265 135 9 623 872 1270 1520 1.25e-42 169
Msa0606360 MtrunA17_Chr6g0483701 57.820 422 165 5 17 435 23 434 3.70e-148 461
Msa0606360 MtrunA17_Chr6g0483701 40.773 233 129 4 632 855 711 943 2.95e-45 176
Msa0606360 MtrunA17_Chr4g0070001 53.922 408 166 4 22 429 141 526 2.75e-130 416
Msa0606360 MtrunA17_Chr4g0070001 36.154 260 154 6 610 862 770 1024 2.64e-41 164
Msa0606360 MtrunA17_Chr1g0152231 38.964 444 244 9 23 454 2 430 8.84e-80 275
Msa0606360 MtrunA17_Chr1g0193221 43.169 366 185 6 23 376 2 356 1.06e-78 278
Msa0606360 MtrunA17_Chr7g0258991 39.243 423 228 10 21 425 70 481 3.38e-75 265
Msa0606360 MtrunA17_Chr3g0145071 37.931 435 245 8 3 425 80 501 5.64e-75 265
Msa0606360 MtrunA17_Chr4g0035661 37.590 415 236 7 23 425 88 491 3.43e-73 260
Msa0606360 MtrunA17_Chr1g0178411 33.850 452 258 8 11 431 5 446 4.51e-56 209
Msa0606360 MtrunA17_Chr2g0327581 33.333 414 243 6 10 399 40 444 5.29e-55 206
Msa0606360 MtrunA17_Chr7g0266631 32.944 428 252 6 25 421 10 433 2.26e-53 201
Msa0606360 MtrunA17_Chr3g0122121 36.815 383 195 12 25 373 99 468 3.47e-51 195
Msa0606360 MtrunA17_Chr1g0182151 30.973 452 279 9 22 445 52 498 7.05e-51 194
Msa0606360 MtrunA17_Chr2g0322291 33.810 420 230 9 3 382 60 471 4.72e-50 192
Msa0606360 MtrunA17_Chr3g0132921 30.886 463 247 11 70 492 47 476 7.57e-50 184
Msa0606360 MtrunA17_Chr8g0369881 32.979 376 227 8 2 365 853 1215 4.38e-49 189
Msa0606360 MtrunA17_Chr8g0377731 34.250 400 215 10 25 392 56 439 9.58e-49 187
Msa0606360 MtrunA17_Chr5g0427481 35.965 342 174 8 70 376 55 386 2.29e-47 183
Msa0606360 MtrunA17_Chr4g0053211 34.351 393 201 14 70 411 50 436 2.89e-47 182
Msa0606360 MtrunA17_Chr1g0195111 35.106 376 217 10 16 376 388 751 4.87e-47 182
Msa0606360 MtrunA17_Chr4g0045381 35.751 386 192 8 25 372 194 561 5.16e-47 183
Msa0606360 MtrunA17_Chr4g0062291 34.758 351 202 8 18 350 117 458 4.62e-46 176
Msa0606360 MtrunA17_Chr5g0407791 32.461 382 234 9 7 375 872 1242 7.76e-46 178
Msa0606360 MtrunA17_Chr2g0307481 35.088 342 202 8 22 350 66 400 1.14e-44 171
Msa0606360 MtrunA17_Chr4g0069141 36.053 380 200 12 25 376 154 518 1.14e-44 175
Msa0606360 MtrunA17_Chr1g0192481 33.747 403 229 14 12 389 49 438 1.93e-44 169
Msa0606360 MtrunA17_Chr5g0398521 34.043 376 215 8 24 372 57 426 6.34e-43 168
Msa0606360 MtrunA17_Chr1g0153061 33.422 377 207 10 70 404 46 420 7.90e-43 169
Msa0606360 MtrunA17_Chr3g0134191 33.247 385 212 10 70 411 46 428 3.00e-42 167
Msa0606360 MtrunA17_Chr3g0102921 31.738 397 217 12 16 377 430 807 2.41e-41 164
Msa0606360 MtrunA17_Chr2g0312631 30.819 464 278 17 25 463 385 830 2.44e-41 164
Msa0606360 MtrunA17_Chr2g0319271 33.690 374 192 11 4 340 380 734 2.64e-41 162
Msa0606360 MtrunA17_Chr7g0245931 32.000 375 229 6 24 375 52 423 5.59e-41 162
Msa0606360 MtrunA17_Chr7g0271961 31.818 374 227 10 16 376 393 751 6.79e-41 162
Msa0606360 MtrunA17_Chr5g0411971 32.084 427 262 13 7 416 381 796 1.48e-40 161
Msa0606360 MtrunA17_Chr5g0447041 30.824 425 213 13 16 377 426 832 4.10e-40 160
Msa0606360 MtrunA17_Chr2g0280421 33.240 358 211 9 1 341 415 761 6.89e-40 158
Msa0606360 MtrunA17_Chr4g0042061 33.242 364 206 9 4 340 413 766 1.35e-39 157
Msa0606360 MtrunA17_Chr2g0331761 33.735 332 205 7 24 347 185 509 1.86e-39 156
Msa0606360 MtrunA17_Chr5g0421521 30.580 448 275 14 7 429 356 792 2.35e-39 157
Msa0606360 MtrunA17_Chr5g0421591 30.804 448 274 14 7 429 356 792 6.97e-39 155
Msa0606360 MtrunA17_Chr4g0049011 31.319 364 214 8 3 340 259 612 1.33e-38 153
Msa0606360 MtrunA17_Chr6g0485471 33.529 340 213 7 13 347 108 439 3.35e-38 152
Msa0606360 MtrunA17_Chr1g0191851 33.687 377 214 12 25 378 148 511 3.03e-37 150
Msa0606360 MtrunA17_Chr7g0238581 29.798 396 231 11 24 384 25 408 6.99e-37 147
Msa0606360 MtrunA17_Chr7g0272871 31.894 417 246 13 25 417 128 530 1.09e-36 148
Msa0606360 MtrunA17_Chr2g0295881 33.138 341 208 8 24 347 197 534 8.79e-36 146
Msa0606360 MtrunA17_Chr7g0257301 31.707 410 210 13 16 373 384 775 1.11e-35 146
Msa0606360 MtrunA17_Chr4g0067421 32.733 333 204 8 24 340 205 533 3.70e-33 137
Msa0606360 MtrunA17_Chr3g0101021 28.272 382 224 9 25 374 76 439 1.19e-31 133
Msa0606360 MtrunA17_Chr5g0445211 28.818 347 215 8 71 386 109 454 1.51e-29 127
Msa0606360 MtrunA17_Chr1g0191181 27.889 398 225 9 71 448 128 483 2.80e-27 118
Msa0606360 MtrunA17_Chr7g0269681 38.122 181 104 4 196 376 49 221 7.73e-25 109
Msa0606360 MtrunA17_Chr8g0372181 51.648 91 43 1 779 868 1 91 1.55e-22 92.8
Msa0606360 MtrunA17_Chr8g0386891 40.690 145 80 3 196 340 12 150 5.78e-21 96.7
Msa0606360 MtrunA17_Chr8g0367581 29.909 331 202 13 25 344 147 458 7.65e-19 92.4
Msa0606360 MtrunA17_Chr6g0484501 33.333 207 112 5 196 400 42 224 3.01e-17 82.0
Msa0606360 MtrunA17_Chr6g0470541 23.585 318 214 11 21 326 2 302 1.54e-16 84.7
Msa0606360 MtrunA17_Chr8g0390991 38.621 145 83 3 196 340 12 150 2.64e-16 83.2
Msa0606360 MtrunA17_Chr7g0269691 35.758 165 91 5 16 169 392 552 3.23e-14 76.6
Msa0606360 MtrunA17_Chr8g0390981 33.143 175 98 6 9 169 499 668 3.52e-14 76.6
Msa0606360 MtrunA17_Chr6g0484511 33.548 155 85 5 25 166 290 439 6.67e-14 75.5
Msa0606360 MtrunA17_Chr8g0386901 32.500 160 95 4 16 164 475 632 1.80e-13 74.3
Msa0606360 MtrunA17_Chr3g0142841 25.191 262 176 6 73 322 145 398 8.02e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606360 AT2G21300.2 58.434 907 296 17 1 872 1 861 0.0 983
Msa0606360 AT2G21300.4 58.434 907 296 17 1 872 1 861 0.0 983
Msa0606360 AT2G21300.3 58.434 907 296 17 1 872 1 861 0.0 983
Msa0606360 AT2G21300.1 58.434 907 296 17 1 872 1 861 0.0 983
Msa0606360 AT2G21300.5 58.434 907 296 17 1 872 1 861 0.0 983
Msa0606360 AT4G38950.3 58.305 885 275 20 22 872 11 835 0.0 936
Msa0606360 AT4G38950.5 58.305 885 275 20 22 872 11 835 0.0 936
Msa0606360 AT4G38950.4 58.305 885 275 20 22 872 11 835 0.0 936
Msa0606360 AT4G38950.1 58.305 885 275 20 22 872 11 835 0.0 936
Msa0606360 AT4G38950.2 58.305 885 275 20 22 872 11 835 0.0 936
Msa0606360 AT3G51150.2 68.019 419 130 2 13 427 6 424 0.0 589
Msa0606360 AT3G51150.2 51.471 204 95 3 672 872 849 1051 1.52e-57 214
Msa0606360 AT3G51150.4 68.019 419 130 2 13 427 6 424 0.0 589
Msa0606360 AT3G51150.4 51.471 204 95 3 672 872 849 1051 1.52e-57 214
Msa0606360 AT3G51150.3 68.019 419 130 2 13 427 6 424 0.0 589
Msa0606360 AT3G51150.3 51.471 204 95 3 672 872 849 1051 1.52e-57 214
Msa0606360 AT3G51150.1 68.019 419 130 2 13 427 6 424 0.0 588
Msa0606360 AT3G51150.1 51.471 204 95 3 672 872 847 1049 1.55e-57 214
Msa0606360 AT5G66310.2 67.136 426 136 2 13 434 7 432 0.0 582
Msa0606360 AT5G66310.2 43.200 250 124 5 632 872 820 1060 5.30e-52 197
Msa0606360 AT5G66310.3 67.136 426 136 2 13 434 7 432 0.0 582
Msa0606360 AT5G66310.3 43.200 250 124 5 632 872 820 1060 5.30e-52 197
Msa0606360 AT5G66310.1 67.136 426 136 2 13 434 7 432 0.0 582
Msa0606360 AT5G66310.1 43.200 250 124 5 632 872 820 1060 5.30e-52 197
Msa0606360 AT4G24170.1 67.703 418 120 7 20 428 2 413 2.54e-180 546
Msa0606360 AT4G24170.1 38.362 232 113 6 643 870 791 996 3.74e-36 148
Msa0606360 AT4G24170.2 67.703 418 120 7 20 428 2 413 2.54e-180 546
Msa0606360 AT4G24170.2 38.362 232 113 6 643 870 791 996 3.74e-36 148
Msa0606360 AT1G18370.1 57.971 414 162 4 22 433 29 432 5.62e-146 456
Msa0606360 AT1G18370.1 38.075 239 125 5 632 854 721 952 5.00e-44 172
Msa0606360 AT3G43210.3 56.699 418 170 5 9 419 9 422 3.99e-143 447
Msa0606360 AT3G43210.3 35.484 310 171 12 567 854 614 916 2.60e-41 164
Msa0606360 AT3G43210.5 56.699 418 170 5 9 419 9 422 3.99e-143 447
Msa0606360 AT3G43210.5 35.484 310 171 12 567 854 614 916 2.60e-41 164
Msa0606360 AT3G43210.2 56.699 418 170 5 9 419 9 422 3.99e-143 447
Msa0606360 AT3G43210.2 35.484 310 171 12 567 854 614 916 2.60e-41 164
Msa0606360 AT3G43210.4 56.699 418 170 5 9 419 9 422 3.99e-143 447
Msa0606360 AT3G43210.4 35.484 310 171 12 567 854 614 916 2.60e-41 164
Msa0606360 AT3G43210.1 56.699 418 170 5 9 419 9 422 3.99e-143 447
Msa0606360 AT3G43210.1 35.484 310 171 12 567 854 614 916 2.60e-41 164
Msa0606360 AT5G42490.2 69.517 269 81 1 20 288 5 272 3.38e-115 377
Msa0606360 AT5G42490.2 46.328 177 86 3 696 870 906 1075 1.49e-43 171
Msa0606360 AT5G42490.1 69.517 269 81 1 20 288 5 272 4.11e-115 377
Msa0606360 AT5G42490.1 46.328 177 86 3 696 870 910 1079 1.45e-43 171
Msa0606360 AT3G51150.5 70.588 255 73 1 175 427 17 271 4.42e-110 359
Msa0606360 AT3G51150.5 51.471 204 95 3 672 872 696 898 8.16e-58 214
Msa0606360 AT3G10180.2 42.667 375 193 5 23 385 2 366 2.23e-84 295
Msa0606360 AT3G10180.1 42.667 375 193 5 23 385 2 366 3.29e-84 294
Msa0606360 AT3G12020.4 43.802 363 189 5 21 377 66 419 2.24e-78 274
Msa0606360 AT3G12020.1 43.802 363 189 5 21 377 66 419 2.24e-78 274
Msa0606360 AT3G12020.3 40.662 423 223 9 21 425 66 478 1.02e-77 273
Msa0606360 AT3G12020.2 40.662 423 223 9 21 425 66 478 1.02e-77 273
Msa0606360 AT5G06670.8 41.322 363 198 5 21 377 63 416 2.69e-76 263
Msa0606360 AT5G06670.4 41.322 363 198 5 21 377 63 416 2.69e-76 263
Msa0606360 AT5G06670.7 41.322 363 198 5 21 377 63 416 2.69e-76 263
Msa0606360 AT5G06670.5 41.322 363 198 5 21 377 63 416 4.86e-76 263
Msa0606360 AT1G21730.1 42.133 375 200 7 21 388 72 436 1.11e-74 262
Msa0606360 AT5G06670.2 41.322 363 198 5 21 377 63 416 1.36e-74 263
Msa0606360 AT5G06670.3 41.322 363 198 5 21 377 63 416 1.36e-74 263
Msa0606360 AT1G59540.1 42.350 366 189 7 23 377 2 356 8.64e-74 259
Msa0606360 AT4G39050.1 37.292 421 239 7 18 425 92 500 2.69e-72 258
Msa0606360 AT5G06670.6 40.323 372 198 6 21 377 63 425 7.18e-72 256
Msa0606360 AT5G06670.1 40.323 372 198 6 21 377 63 425 7.18e-72 256
Msa0606360 AT2G21380.2 37.198 414 235 8 25 425 105 506 3.10e-71 255
Msa0606360 AT2G21380.1 37.198 414 235 8 25 425 105 506 3.10e-71 255
Msa0606360 AT2G28620.1 34.222 450 257 9 9 430 40 478 6.65e-59 218
Msa0606360 AT2G28620.3 34.222 450 257 9 9 430 40 478 8.00e-59 218
Msa0606360 AT2G28620.2 34.222 450 257 9 9 430 40 478 8.00e-59 218
Msa0606360 AT1G59540.2 44.828 261 134 3 122 377 9 264 1.28e-57 211
Msa0606360 AT2G36200.1 33.184 446 252 10 10 421 3 436 1.05e-54 206
Msa0606360 AT2G36200.2 33.563 435 243 10 10 410 3 425 8.48e-54 203
Msa0606360 AT3G45850.2 32.870 432 260 6 25 430 56 483 1.36e-53 202
Msa0606360 AT3G45850.1 32.870 432 260 6 25 430 56 483 1.36e-53 202
Msa0606360 AT4G14150.1 35.013 397 206 8 25 386 92 471 1.56e-53 203
Msa0606360 AT3G23670.2 34.152 407 213 9 17 387 91 478 5.80e-52 197
Msa0606360 AT3G23670.1 34.152 407 213 9 17 387 91 478 1.10e-51 197
Msa0606360 AT3G49650.1 35.027 374 214 10 25 376 15 381 1.20e-50 192
Msa0606360 AT2G37420.1 31.887 461 256 12 22 442 46 488 2.58e-50 192
Msa0606360 AT2G37420.2 31.887 461 256 12 22 442 46 488 2.58e-50 192
Msa0606360 AT3G17360.1 37.143 385 189 11 25 376 169 533 8.60e-50 192
Msa0606360 AT3G17360.3 37.143 385 189 11 25 376 169 533 9.17e-50 192
Msa0606360 AT3G17360.2 37.143 385 189 11 25 376 169 533 1.02e-49 191
Msa0606360 AT3G44050.1 35.825 388 193 9 25 374 94 463 5.37e-48 186
Msa0606360 AT3G63480.2 34.930 355 202 7 25 360 4 348 1.41e-46 174
Msa0606360 AT3G19050.1 36.667 360 181 6 25 353 194 537 5.43e-46 180
Msa0606360 AT1G18550.1 34.903 361 197 9 9 346 136 481 9.49e-46 176
Msa0606360 AT5G65930.3 32.884 371 224 8 7 365 877 1234 3.15e-45 177
Msa0606360 AT5G60930.2 31.633 392 213 9 71 414 45 429 3.25e-45 177
Msa0606360 AT5G65930.1 32.884 371 224 8 7 365 870 1227 3.30e-45 177
Msa0606360 AT5G65930.2 32.884 371 224 8 7 365 871 1228 3.51e-45 177
Msa0606360 AT5G60930.3 31.633 392 213 9 71 414 45 429 3.74e-45 177
Msa0606360 AT3G63480.1 34.540 359 202 9 25 360 4 352 4.83e-45 169
Msa0606360 AT5G60930.1 31.633 392 213 9 71 414 45 429 5.73e-45 176
Msa0606360 AT5G27000.1 34.133 375 222 10 16 376 386 749 3.69e-44 173
Msa0606360 AT2G47500.1 35.550 391 218 12 16 382 391 771 4.10e-44 173
Msa0606360 AT2G47500.2 35.550 391 218 12 16 382 391 771 4.46e-44 172
Msa0606360 AT1G09170.4 33.416 404 227 12 16 393 426 813 5.35e-44 172
Msa0606360 AT1G09170.2 33.002 403 230 11 16 393 426 813 7.08e-44 172
Msa0606360 AT1G09170.5 33.002 403 230 11 16 393 426 813 7.17e-44 172
Msa0606360 AT3G50240.2 30.679 427 234 13 25 404 26 437 2.79e-43 170
Msa0606360 AT3G50240.1 31.075 428 231 13 25 404 26 437 3.13e-43 170
Msa0606360 AT3G50240.4 31.075 428 231 13 25 404 26 437 4.19e-43 170
Msa0606360 AT5G47820.2 32.767 412 221 13 25 389 12 414 7.90e-43 169
Msa0606360 AT5G47820.1 32.767 412 221 13 25 389 12 414 7.90e-43 169
Msa0606360 AT1G12430.1 33.333 372 222 7 24 372 70 438 9.44e-43 168
Msa0606360 AT1G12430.2 33.333 372 222 7 24 372 70 438 1.02e-42 168
Msa0606360 AT1G09170.3 33.693 371 220 10 16 372 426 784 1.27e-42 167
Msa0606360 AT1G09170.7 33.693 371 220 10 16 372 426 784 1.27e-42 167
Msa0606360 AT3G16060.1 34.694 343 205 8 13 347 162 493 1.19e-41 163
Msa0606360 AT3G44730.2 33.815 346 193 10 16 340 414 744 1.83e-41 165
Msa0606360 AT3G44730.3 33.815 346 193 10 16 340 414 744 1.83e-41 165
Msa0606360 AT3G44730.1 33.923 339 202 9 16 340 369 699 2.04e-41 165
Msa0606360 AT3G44730.4 33.923 339 202 9 16 340 369 699 2.04e-41 165
Msa0606360 AT1G01950.1 30.093 432 247 10 16 421 55 457 2.10e-41 164
Msa0606360 AT1G01950.3 30.093 432 247 10 16 421 55 457 2.19e-41 164
Msa0606360 AT1G01950.2 30.093 432 247 10 16 421 55 457 2.41e-41 164
Msa0606360 AT5G54670.3 33.056 360 211 7 4 341 317 668 3.15e-41 162
Msa0606360 AT5G54670.1 33.056 360 211 7 4 341 377 728 4.49e-41 162
Msa0606360 AT5G54670.2 33.056 360 211 7 4 341 377 728 4.49e-41 162
Msa0606360 AT4G27180.1 33.425 362 207 9 4 341 368 719 7.39e-41 161
Msa0606360 AT4G27180.2 33.425 362 207 9 4 341 368 719 7.39e-41 161
Msa0606360 AT2G22610.2 31.415 417 238 13 7 407 400 784 1.13e-40 162
Msa0606360 AT3G54870.3 31.362 389 213 10 56 423 135 490 1.21e-40 162
Msa0606360 AT3G54870.1 31.362 389 213 10 56 423 135 490 1.34e-40 162
Msa0606360 AT5G27550.2 33.178 428 231 13 25 440 133 517 1.39e-40 160
Msa0606360 AT5G27550.1 33.178 428 231 13 25 440 133 517 1.39e-40 160
Msa0606360 AT3G54870.2 31.362 389 213 10 56 423 135 490 1.51e-40 162
Msa0606360 AT5G41310.1 31.971 416 227 14 16 418 414 786 1.84e-40 161
Msa0606360 AT1G73860.1 30.846 402 235 12 25 409 510 885 9.80e-40 159
Msa0606360 AT4G05190.1 32.597 362 207 8 8 341 412 764 1.07e-39 158
Msa0606360 AT4G05190.2 33.333 345 193 8 25 341 416 751 1.36e-39 158
Msa0606360 AT1G73860.2 30.846 402 235 12 25 409 427 802 2.47e-39 158
Msa0606360 AT4G21270.1 32.464 345 196 8 25 341 432 767 3.27e-38 154
Msa0606360 AT1G63640.5 30.693 404 236 12 16 402 454 830 8.44e-38 153
Msa0606360 AT1G63640.3 30.693 404 236 12 16 402 464 840 9.02e-38 153
Msa0606360 AT1G63640.1 30.693 404 236 12 16 402 464 840 9.25e-38 153
Msa0606360 AT1G63640.4 30.693 404 236 12 16 402 464 840 9.25e-38 153
Msa0606360 AT1G63640.2 31.017 403 229 13 16 402 464 833 9.58e-38 153
Msa0606360 AT3G10310.2 34.746 354 177 12 16 340 355 683 1.66e-37 152
Msa0606360 AT3G10310.1 34.746 354 177 12 16 340 355 683 2.01e-37 152
Msa0606360 AT1G09170.6 33.754 317 188 8 16 319 426 733 2.30e-37 150
Msa0606360 AT1G09170.8 33.754 317 188 8 16 319 426 733 2.30e-37 150
Msa0606360 AT1G18410.3 32.727 330 200 8 25 340 490 811 3.19e-37 151
Msa0606360 AT1G18410.2 32.727 330 200 8 25 340 490 811 3.19e-37 151
Msa0606360 AT1G18410.4 29.519 437 260 14 25 441 633 1041 4.24e-37 151
Msa0606360 AT2G22610.1 26.275 647 411 21 7 601 400 1032 4.93e-37 151
Msa0606360 AT2G22610.3 26.275 647 411 21 7 601 401 1033 5.15e-37 150
Msa0606360 AT1G72250.4 29.913 458 280 16 4 436 492 933 1.01e-36 150
Msa0606360 AT1G72250.3 29.913 458 280 16 4 436 493 934 1.06e-36 150
Msa0606360 AT1G72250.2 29.913 458 280 16 4 436 481 922 1.07e-36 150
Msa0606360 AT1G72250.1 29.913 458 280 16 4 436 472 913 1.44e-36 149
Msa0606360 AT1G18410.5 32.722 327 196 8 25 340 480 793 7.13e-36 147
Msa0606360 AT1G18410.1 29.493 434 256 14 25 441 633 1033 9.00e-36 147
Msa0606360 AT3G50240.3 33.138 341 173 9 111 404 3 335 9.14e-36 146
Msa0606360 AT1G55550.1 32.888 374 205 12 25 375 92 442 3.25e-35 144
Msa0606360 AT1G09170.1 30.256 390 222 11 16 393 426 777 1.71e-34 142
Msa0606360 AT3G16630.2 31.287 342 210 7 24 347 193 527 5.17e-34 140
Msa0606360 AT3G16630.1 31.287 342 210 7 24 347 193 527 5.17e-34 140
Msa0606360 AT5G02370.1 28.986 345 211 11 25 353 21 347 1.02e-32 134
Msa0606360 AT3G20150.2 27.507 349 217 6 71 386 136 481 5.17e-31 132
Msa0606360 AT3G20150.1 27.507 349 217 6 71 386 136 481 6.92e-31 131
Msa0606360 AT1G01950.4 29.730 333 204 6 107 413 1 329 6.63e-29 124
Msa0606360 AT5G27950.1 31.310 313 184 8 71 367 119 416 1.33e-28 122
Msa0606360 AT5G65460.2 29.305 331 204 10 25 344 139 450 5.88e-21 99.8
Msa0606360 AT5G65460.4 29.305 331 204 10 25 344 139 450 5.97e-21 99.8
Msa0606360 AT5G65460.1 29.305 331 204 10 25 344 139 450 6.23e-21 99.8
Msa0606360 AT5G65460.6 29.305 331 204 10 25 344 139 450 6.50e-21 99.4
Msa0606360 AT5G65460.3 28.402 338 205 9 25 344 139 457 2.01e-20 97.8
Msa0606360 AT5G27950.2 30.078 256 155 6 122 367 9 250 6.81e-19 91.3
Msa0606360 AT5G10470.2 28.399 331 207 9 25 344 143 454 3.05e-18 90.9
Msa0606360 AT5G10470.1 28.399 331 207 9 25 344 143 454 3.15e-18 90.9
Msa0606360 AT5G23910.2 25.912 274 176 9 60 323 45 301 1.27e-15 82.0
Msa0606360 AT5G23910.1 25.912 274 176 9 60 323 41 297 1.51e-15 81.6
Msa0606360 AT4G14330.1 27.027 296 175 9 71 344 89 365 6.99e-15 79.7
Msa0606360 AT1G20060.3 29.091 275 157 9 73 323 165 425 3.41e-12 70.9
Msa0606360 AT1G20060.4 29.091 275 157 9 73 323 165 425 3.42e-12 70.9
Msa0606360 AT1G20060.7 29.091 275 157 9 73 323 165 425 3.49e-12 70.9
Msa0606360 AT1G20060.10 29.091 275 157 9 73 323 165 425 3.56e-12 70.9
Msa0606360 AT1G20060.8 29.091 275 157 9 73 323 165 425 3.79e-12 70.9
Msa0606360 AT1G20060.9 29.091 275 157 9 73 323 165 425 3.80e-12 70.9
Msa0606360 AT1G20060.5 29.091 275 157 9 73 323 165 425 3.90e-12 70.9
Msa0606360 AT1G20060.2 29.091 275 157 9 73 323 165 425 4.03e-12 70.9
Msa0606360 AT1G20060.6 29.091 275 157 9 73 323 165 425 4.17e-12 70.9

Find 221 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAACCATCTAAATTTAA+TGG 0.137277 4_2:-52606563 None:intergenic
CTGGAAGACCAGATGGTTTA+TGG 0.148054 4_2:+52606528 Msa0606360:CDS
AAGTTCTGCCAGGGAATTTC+TGG 0.153690 4_2:+52604898 Msa0606360:CDS
CCATTCAATGGGTTTGAAAA+AGG 0.199093 4_2:+52606500 Msa0606360:CDS
TGCAGCTAGCAGACCGTTTA+TGG 0.204765 4_2:+52607747 Msa0606360:CDS
CTCACATTGCGTGTTGAATT+TGG 0.223910 4_2:+52601918 None:intergenic
TTTGGCAGGAAGAAGATTTA+TGG 0.227161 4_2:+52605934 Msa0606360:intron
TTCCTTCTTGCTGCAAATTA+AGG 0.234058 4_2:+52608237 Msa0606360:three_prime_UTR
TCAGATGGATAAGGAAATTA+AGG 0.238308 4_2:+52605714 Msa0606360:intron
CACATACCAATCTGATAATT+TGG 0.239249 4_2:-52604792 None:intergenic
GGTGGCAGACAGAGTATTTC+GGG 0.253890 4_2:+52603765 Msa0606360:intron
AAGCTCTACCTCCATGTAAA+TGG 0.274251 4_2:-52607408 None:intergenic
AAGTAGGTCCTGTGGGTTAA+TGG 0.288853 4_2:-52607353 None:intergenic
CTCAATGGAGAGACTTGTTT+CGG 0.292975 4_2:-52608100 None:intergenic
AACGATTCTCAGTCTTCTAT+TGG 0.293108 4_2:+52606599 Msa0606360:CDS
ACAGTATCTGGAGGGGAAAA+TGG 0.295774 4_2:+52606305 Msa0606360:CDS
GATTTGGCTTTGACAGTATC+TGG 0.301840 4_2:+52606293 Msa0606360:CDS
CTTAAGTGACAACGGGGATT+TGG 0.305652 4_2:+52606277 Msa0606360:CDS
TTCAATCCATTAAATTTAGA+TGG 0.309591 4_2:+52606557 Msa0606360:CDS
TACATTAACCTGTGCTTTAG+TGG 0.313427 4_2:-52605457 None:intergenic
CATAAACCATCTGGTCTTCC+AGG 0.318695 4_2:-52606527 None:intergenic
TCAAATGTGTAGACATTTCC+TGG 0.325306 4_2:-52606334 None:intergenic
TAAGTAAACTCCGGTTTATA+TGG 0.325660 4_2:-52605141 None:intergenic
CTCTCCATTTCTCCTGTCTC+AGG 0.330013 4_2:-52606473 None:intergenic
GAAGGATCAGATATCTAAAA+AGG 0.331016 4_2:+52605798 Msa0606360:CDS
ATCTCAAGCTGTTGCCTCTA+AGG 0.331700 4_2:-52606640 None:intergenic
TCAATGGAGAGACTTGTTTC+GGG 0.334215 4_2:-52608099 None:intergenic
ATACAAACTACTCACTTTAG+AGG 0.344006 4_2:+52608068 Msa0606360:three_prime_UTR
TGGTGGCAGACAGAGTATTT+CGG 0.358079 4_2:+52603764 Msa0606360:intron
TTTAATTATTCAGATGGATA+AGG 0.359650 4_2:+52605705 Msa0606360:intron
ATTGTATCGTATCGCTATTA+TGG 0.369045 4_2:+52608171 Msa0606360:three_prime_UTR
TGAAACAGTTGCGATGTCTC+TGG 0.372358 4_2:+52602205 Msa0606360:five_prime_UTR
TCATCCCAGCAACAAAAGTA+TGG 0.377323 4_2:-52606691 None:intergenic
TTTCCAAGTGCCTACACATT+TGG 0.377835 4_2:+52603211 Msa0606360:CDS
TGCTAATGAATCTGCAGATT+GGG 0.381276 4_2:+52603132 Msa0606360:CDS
ATTATTCTTCTTTATGATCT+CGG 0.385494 4_2:+52602065 Msa0606360:five_prime_UTR
TGCTAATATACGTCTTCATT+AGG 0.391068 4_2:+52607973 Msa0606360:three_prime_UTR
TTGGCAGGAAGAAGATTTAT+GGG 0.394933 4_2:+52605935 Msa0606360:intron
AACTTACTACACTAGCTGAT+AGG 0.396765 4_2:-52604940 None:intergenic
GACCAGTCTAAAGGAGTTCC+TGG 0.404750 4_2:-52607272 None:intergenic
CAAATCCCCGTTGTCACTTA+AGG 0.405474 4_2:-52606276 None:intergenic
ATCCGTCCTTAAGTGACAAC+GGG 0.408908 4_2:+52606270 Msa0606360:CDS
AGAGGAGACTCTACAGGATT+GGG 0.412152 4_2:+52604419 Msa0606360:CDS
TCTGGCTGTCTTTCTCAGAC+TGG 0.414517 4_2:-52607472 None:intergenic
AACCTTCACGCAATGTATTC+CGG 0.415906 4_2:-52603183 None:intergenic
GCATCTCAGGTATCATCAGC+TGG 0.417129 4_2:+52605097 Msa0606360:CDS
CGAGCCCTCAAGGAGATGTT+TGG 0.417430 4_2:+52607845 Msa0606360:CDS
CTGCTAATGAATCTGCAGAT+TGG 0.419350 4_2:+52603131 Msa0606360:CDS
AGGGAGCGAGCGTGCATCTC+AGG 0.420236 4_2:+52605084 Msa0606360:CDS
AGAAGATTCTTGTGTTACTT+AGG 0.420887 4_2:+52603080 Msa0606360:CDS
GTTCCTGGTGCCTCCTGCAT+TGG 0.421307 4_2:-52607257 None:intergenic
CCGTCAGTGGATGACCTTAG+AGG 0.426876 4_2:+52606626 Msa0606360:CDS
GGCAACAGCTTGAGATCATC+TGG 0.430160 4_2:+52606647 Msa0606360:CDS
AATTCCTTTACCTTCACAAA+AGG 0.433816 4_2:-52604463 None:intergenic
AACTTTCTCCATAAACCATC+TGG 0.438525 4_2:-52606536 None:intergenic
AACTAGAAGCCGGAGTTGTT+CGG 0.440145 4_2:+52606430 Msa0606360:CDS
CTCTGTAAGTTTCTCTAGAA+CGG 0.444093 4_2:-52604400 None:intergenic
TTCCCTGGCAGAACTTTCAA+TGG 0.446524 4_2:-52604891 None:intergenic
CTATTTAACGAATGGGGCAT+TGG 0.449067 4_2:+52607701 Msa0606360:CDS
TATGAAAAGCAGCTTGTTGA+TGG 0.452686 4_2:+52606734 Msa0606360:CDS
CTGGAGAAGAGTTGTCGAAA+TGG 0.453784 4_2:+52603026 Msa0606360:CDS
TCATTAGGAGTGTGTACAGC+AGG 0.453816 4_2:+52607988 Msa0606360:three_prime_UTR
ATGGAGAGGACGCCATTCAA+TGG 0.453935 4_2:+52606488 Msa0606360:CDS
TATCAGTGTTGCACCATAAA+CGG 0.454876 4_2:-52607760 None:intergenic
TCTGTAAGTTTCTCTAGAAC+GGG 0.458045 4_2:-52604399 None:intergenic
TTCCCCTGAGACAGGAGAAA+TGG 0.463457 4_2:+52606469 Msa0606360:CDS
GAAAAGGCTATTTAACGAAT+GGG 0.464097 4_2:+52607694 Msa0606360:CDS
CAGAGGAGACTCTACAGGAT+TGG 0.465719 4_2:+52604418 Msa0606360:CDS
AGACAGTCAAATTCGTCATC+TGG 0.468964 4_2:-52608204 None:intergenic
GAAATTTCCTTCTCATTCAA+AGG 0.470020 4_2:-52603109 None:intergenic
TTCTTGTGTTACTTAGGCTT+AGG 0.470717 4_2:+52603086 Msa0606360:CDS
TGGGATTAGCTTGTTAATTG+AGG 0.472715 4_2:+52602960 Msa0606360:five_prime_UTR
CTTCTTTGCAGTATTCATCA+AGG 0.474289 4_2:-52606196 None:intergenic
CTGTCTCCACTATTATATTG+AGG 0.476344 4_2:-52606029 None:intergenic
AAGAAGGTTGCCATATAAAC+CGG 0.478479 4_2:+52605131 Msa0606360:CDS
CAATCTCTACATGCCATGTC+AGG 0.480188 4_2:+52606377 Msa0606360:CDS
TCTCCATTTCTCCTGTCTCA+GGG 0.480908 4_2:-52606472 None:intergenic
AGGTATATGAGGAAGGAGCT+AGG 0.481647 4_2:+52603806 Msa0606360:CDS
TAACACGGCGAAGCCATTCA+TGG 0.481780 4_2:+52607888 Msa0606360:CDS
AACTCTCTAATGCATATGTT+GGG 0.485776 4_2:-52605999 None:intergenic
CGCATACTGCAGCCTTGCTT+AGG 0.486895 4_2:+52605330 Msa0606360:CDS
ATCTCACCAAATTATCAGAT+TGG 0.487669 4_2:+52604786 Msa0606360:CDS
AACGTGATCTTGCTGAATCA+AGG 0.488340 4_2:+52605749 Msa0606360:CDS
TCCTTTGCCCAGAAATTCCC+TGG 0.488533 4_2:-52604906 None:intergenic
TCAGAGTCCTCAAGCATTTG+TGG 0.489326 4_2:+52605975 Msa0606360:CDS
TTGAAGTTAACGTGATTGTC+TGG 0.489517 4_2:-52607490 None:intergenic
AACCTTAATTTGCAGCAAGA+AGG 0.489869 4_2:-52608239 None:intergenic
TGGAGAGGACGCCATTCAAT+GGG 0.490245 4_2:+52606489 Msa0606360:CDS
TTACCAAATGTGTAGGCACT+TGG 0.492018 4_2:-52603214 None:intergenic
ACAAACAGATTCCATTTACA+TGG 0.493660 4_2:+52607397 Msa0606360:CDS
TTGTGTGTTAGTGTCGTGTC+TGG 0.494589 4_2:-52602242 None:intergenic
AGACAATCACGTTAACTTCA+AGG 0.495649 4_2:+52607492 Msa0606360:CDS
TTATGAAGCTTATGCGGAAG+AGG 0.496180 4_2:+52607654 Msa0606360:CDS
TAATCAGTGTTGGAGGTAGC+AGG 0.499690 4_2:-52605552 None:intergenic
GAAACAGTTGCGATGTCTCT+GGG 0.500824 4_2:+52602206 Msa0606360:five_prime_UTR
CTTTACCTTCACAAAAGGAT+AGG 0.501285 4_2:-52604458 None:intergenic
TAATGTAGTGATGTCTGATA+AGG 0.501558 4_2:+52605473 Msa0606360:CDS
AACAATCCTCAATATAATAG+TGG 0.503991 4_2:+52606023 Msa0606360:CDS
TGGAGAAGAGTTGTCGAAAT+GGG 0.504063 4_2:+52603027 Msa0606360:CDS
AACTGAATCATTTGAAACTC+AGG 0.505338 4_2:-52602164 None:intergenic
TCTTTATGATCTCGGTGTGT+CGG 0.506170 4_2:+52602073 Msa0606360:five_prime_UTR
GCCAGGGAATTTCTGGGCAA+AGG 0.507390 4_2:+52604905 Msa0606360:CDS
GCTTAGGCCTTTGAATGAGA+AGG 0.507783 4_2:+52603102 Msa0606360:CDS
AATACACATATCTATCTCAA+TGG 0.510126 4_2:-52608115 None:intergenic
AGTTCTGCCAGGGAATTTCT+GGG 0.510390 4_2:+52604899 Msa0606360:CDS
ATGACTGCTTCCCCTGAGAC+AGG 0.512104 4_2:+52606461 Msa0606360:CDS
TGAAACGAAGCAGGTATATG+AGG 0.513008 4_2:+52603795 Msa0606360:CDS
GAAAGATCAACAGATAGAAA+AGG 0.513788 4_2:+52605593 Msa0606360:CDS
TTTCTGAGGAAGAGAGGAAA+AGG 0.515753 4_2:+52607678 Msa0606360:CDS
TCGAAATGGGAGAAGATGAA+TGG 0.517570 4_2:+52603040 Msa0606360:CDS
AAATCTAATAGCATTAAACT+TGG 0.518445 4_2:-52602136 None:intergenic
ATTTGACATGTTTCCTGACA+TGG 0.518750 4_2:-52606390 None:intergenic
AAGTCCAAACATCTCCTTGA+GGG 0.519271 4_2:-52607849 None:intergenic
TGTTGCTGGGATGAAAGAAA+TGG 0.520014 4_2:+52606700 Msa0606360:CDS
CATCTCAGGTATCATCAGCT+GGG 0.520906 4_2:+52605098 Msa0606360:CDS
AAAGCAGCTTGTTGATGGTC+AGG 0.521553 4_2:+52606739 Msa0606360:CDS
AGACCATTGAAAGTTCTGCC+AGG 0.523244 4_2:+52604888 Msa0606360:intron
TGTTCAACATGACTCCGTGC+AGG 0.523415 4_2:-52605390 None:intergenic
GAACTCTCTAATGCATATGT+TGG 0.523864 4_2:-52606000 None:intergenic
CAAAGCTACATAATCAGTGT+TGG 0.525785 4_2:-52605562 None:intergenic
GACACAGTGTGAGAGCTCTT+CGG 0.528394 4_2:+52607615 Msa0606360:intron
ACTTACTACACTAGCTGATA+GGG 0.529106 4_2:-52604939 None:intergenic
CTTGCAGCTCAGAGACAAGT+AGG 0.530862 4_2:+52604733 Msa0606360:intron
GAGAAGATGAATGGAGTTAG+TGG 0.531131 4_2:+52603049 Msa0606360:CDS
GATCCAATGCAGGAGGCACC+AGG 0.532906 4_2:+52607254 Msa0606360:CDS
TGAGGATTTGCTGCGCATGG+TGG 0.534211 4_2:+52605774 Msa0606360:CDS
GGTATATGAGGAAGGAGCTA+GGG 0.535524 4_2:+52603807 Msa0606360:CDS
CAGTGGAAAGACATATACTA+TGG 0.536613 4_2:+52603976 Msa0606360:CDS
AACTGCAGAGACCAGTCTAA+AGG 0.537534 4_2:-52607281 None:intergenic
AAAGAGTTGGCCAGGTTGGA+AGG 0.537609 4_2:+52605516 Msa0606360:CDS
GTATATTAGCAATGCCACTT+TGG 0.538179 4_2:-52607961 None:intergenic
TCTTGCTGAATCAAGGATTG+AGG 0.544535 4_2:+52605756 Msa0606360:CDS
ATCACAAATTAACTAGAAGC+CGG 0.545574 4_2:+52606420 Msa0606360:CDS
CCTAAACAAAAGAAAGAAGT+AGG 0.545806 4_2:-52607369 None:intergenic
AGAGCAGGGACGAGCCCTCA+AGG 0.546310 4_2:+52607835 Msa0606360:CDS
ACTTACAGAGGAGACTCTAC+AGG 0.547856 4_2:+52604413 Msa0606360:CDS
TTGGATTGAATTCAAAGCGC+AGG 0.548324 4_2:+52607720 Msa0606360:CDS
CTGAGGAATGTGAAAGATGT+AGG 0.548594 4_2:+52607227 Msa0606360:CDS
GGAAAAGGCTATTTAACGAA+TGG 0.550100 4_2:+52607693 Msa0606360:CDS
ATACTGCAGCCTTGCTTAGG+TGG 0.551117 4_2:+52605333 Msa0606360:CDS
GATTAGCTTGTTAATTGAGG+TGG 0.551277 4_2:+52602963 Msa0606360:five_prime_UTR
CAACCTCAGCTTACGAATGA+CGG 0.553205 4_2:-52605173 None:intergenic
TTTGCTGCGCATGGTGGGGA+AGG 0.553538 4_2:+52605780 Msa0606360:CDS
GGCTTTGACAGTATCTGGAG+GGG 0.554999 4_2:+52606298 Msa0606360:CDS
CATTGCGTGTTGAATTTGGT+AGG 0.556021 4_2:+52601922 None:intergenic
CGACCGTCATTCGTAAGCTG+AGG 0.556042 4_2:+52605170 Msa0606360:CDS
GGATCATCACGCAACCTAAG+TGG 0.556914 4_2:-52604265 None:intergenic
TGTAGGTGTTGATCCAATGC+AGG 0.558725 4_2:+52607244 Msa0606360:CDS
GAGGATTTGCTGCGCATGGT+GGG 0.558929 4_2:+52605775 Msa0606360:CDS
GTTCAACATGACTCCGTGCA+GGG 0.560044 4_2:-52605389 None:intergenic
CAGTGTGAGAGCTCTTCGGC+GGG 0.560979 4_2:+52607619 Msa0606360:intron
CAATAGTTGCGAGGCTAGTG+AGG 0.563553 4_2:+52607807 Msa0606360:CDS
AGCTACATAATCAGTGTTGG+AGG 0.564822 4_2:-52605559 None:intergenic
GGGTGACTGTGAAACGAAGC+AGG 0.565088 4_2:+52603786 Msa0606360:CDS
AGAAGTTCGATGTGTCGAGT+TGG 0.565179 4_2:+52606214 Msa0606360:CDS
AATACAACCCTCTAGAATGT+AGG 0.566519 4_2:-52608146 None:intergenic
GACCATTGAAAGTTCTGCCA+GGG 0.568444 4_2:+52604889 Msa0606360:intron
GCATATGGGCAAACAAGCAG+TGG 0.571286 4_2:+52603959 Msa0606360:CDS
AGGGGAAAATGGAACAAGCC+AGG 0.572223 4_2:+52606316 Msa0606360:CDS
ACTATTAACCTACATTCTAG+AGG 0.572333 4_2:+52608138 Msa0606360:three_prime_UTR
CTATTAACCTACATTCTAGA+GGG 0.574371 4_2:+52608139 Msa0606360:three_prime_UTR
GGATTCCCTGGAAGACCAGA+TGG 0.574754 4_2:+52606521 Msa0606360:CDS
CACCAGGAACTCCTTTAGAC+TGG 0.575102 4_2:+52607270 Msa0606360:CDS
AAGAAAGAAGTAGGTCCTGT+GGG 0.577186 4_2:-52607360 None:intergenic
AGAGGCTTTCTGAGGAAGAG+AGG 0.579952 4_2:+52607672 Msa0606360:CDS
TGTGATGCTCCGAACAACTC+CGG 0.580662 4_2:-52606439 None:intergenic
GCACTGACAACACTCCACTT+AGG 0.581250 4_2:+52604251 Msa0606360:CDS
CTCCATTTCTCCTGTCTCAG+GGG 0.581535 4_2:-52606471 None:intergenic
AGTGATGTCTGATAAGGCCT+TGG 0.583008 4_2:+52605479 Msa0606360:CDS
GGAAAGACATATACTATGGT+CGG 0.584005 4_2:+52603980 Msa0606360:CDS
ATTTAACTTACCAAATGTGT+AGG 0.586180 4_2:-52603221 None:intergenic
TTCTATTGGAAGTCCGTCAG+TGG 0.593519 4_2:+52606613 Msa0606360:CDS
TGGCTTTGACAGTATCTGGA+GGG 0.594075 4_2:+52606297 Msa0606360:CDS
ACTGGTCTCTGCAGTTCAAG+AGG 0.598036 4_2:+52607288 Msa0606360:CDS
CTTGAGATCATCTGGTGATG+AGG 0.598316 4_2:+52606655 Msa0606360:CDS
TATGCGGAAGAGGCTTTCTG+AGG 0.600165 4_2:+52607664 Msa0606360:CDS
GAATGCAGTAAGGGAAGACA+TGG 0.600216 4_2:+52605276 Msa0606360:intron
TACCGGAATACATTGCGTGA+AGG 0.600495 4_2:+52603181 Msa0606360:CDS
GACAGTGGAAGTATTCAAGA+TGG 0.602866 4_2:+52606047 Msa0606360:CDS
GCTTCACACCTCAGCTAACA+CGG 0.603431 4_2:+52607873 Msa0606360:CDS
AGAAGTTACCACTAAAGCAC+AGG 0.604313 4_2:+52605449 Msa0606360:CDS
CTAGCATTGCCACCTAAGCA+AGG 0.606325 4_2:-52605342 None:intergenic
ACGAAGCAGGTATATGAGGA+AGG 0.610187 4_2:+52603799 Msa0606360:CDS
ATAAACCATCTGGTCTTCCA+GGG 0.610955 4_2:-52606526 None:intergenic
CGATGTCTCTGGGACAGACA+CGG 0.612665 4_2:+52602216 Msa0606360:five_prime_UTR
AAAGAAAGAAGTAGGTCCTG+TGG 0.614224 4_2:-52607361 None:intergenic
GATTGAGGATTTGCTGCGCA+TGG 0.614235 4_2:+52605771 Msa0606360:CDS
TTTGCACTTTGAGCCCTGCA+CGG 0.615755 4_2:+52605376 Msa0606360:CDS
GAGGAGACTCTACAGGATTG+GGG 0.620881 4_2:+52604420 Msa0606360:CDS
GCTATGTACCATTAACCCAC+AGG 0.622275 4_2:+52607345 Msa0606360:CDS
AAATGCTTATGAAGCTTATG+CGG 0.625303 4_2:+52607648 Msa0606360:CDS
TACTACACTAGCTGATAGGG+TGG 0.625784 4_2:-52604936 None:intergenic
GAAATCGCTCTTTCAGTAGT+CGG 0.626438 4_2:+52603829 Msa0606360:CDS
CATGTAGAGATTGTTCATCA+TGG 0.628406 4_2:-52606367 None:intergenic
ATCGCTCTTTCAGTAGTCGG+TGG 0.629355 4_2:+52603832 Msa0606360:CDS
TCCCCGTTGTCACTTAAGGA+CGG 0.631420 4_2:-52606272 None:intergenic
CCTCTAAGGTCATCCACTGA+CGG 0.638852 4_2:-52606626 None:intergenic
TTGGCTTTGACAGTATCTGG+AGG 0.640008 4_2:+52606296 Msa0606360:CDS
TTGCAGCACTCTGCATTACG+TGG 0.640783 4_2:-52607787 None:intergenic
GCTGGGGTGAGATTGAAAGA+AGG 0.644962 4_2:+52605115 Msa0606360:CDS
CATTAGGAGTGTGTACAGCA+GGG 0.646177 4_2:+52607989 Msa0606360:three_prime_UTR
CAATATAATAGTGGAGACAG+TGG 0.646811 4_2:+52606032 Msa0606360:CDS
GATCCGTCCTTAAGTGACAA+CGG 0.648355 4_2:+52606269 Msa0606360:CDS
AGGATTTGCTGCGCATGGTG+GGG 0.651154 4_2:+52605776 Msa0606360:CDS
ATCTCAGGTATCATCAGCTG+GGG 0.651883 4_2:+52605099 Msa0606360:CDS
AAAAGGCTATTTAACGAATG+GGG 0.654647 4_2:+52607695 Msa0606360:CDS
GTTGGGACCACAAATGCTTG+AGG 0.665970 4_2:-52605982 None:intergenic
CTGAGACAGGAGAAATGGAG+AGG 0.668611 4_2:+52606474 Msa0606360:CDS
TGGCTTCGCCGTGTTAGCTG+AGG 0.668748 4_2:-52607881 None:intergenic
ACAGTGTGAGAGCTCTTCGG+CGG 0.670786 4_2:+52607618 Msa0606360:intron
TCGAAAGAGTAAGTAAACTC+CGG 0.675211 4_2:-52605150 None:intergenic
AGGAGACTCTACAGGATTGG+GGG 0.680080 4_2:+52604421 Msa0606360:CDS
AGGTGTTGATCCAATGCAGG+AGG 0.686174 4_2:+52607247 Msa0606360:CDS
AACAGATTCCATTTACATGG+AGG 0.691503 4_2:+52607400 Msa0606360:CDS
GTGGCAGACAGAGTATTTCG+GGG 0.692851 4_2:+52603766 Msa0606360:intron
AGAGTGCTGCAATAGTTGCG+AGG 0.694058 4_2:+52607798 Msa0606360:CDS
TAGGTTGCGTGATGATCCTG+AGG 0.705593 4_2:+52604270 Msa0606360:CDS
AGGAGACAGATAGAAAACTG+AGG 0.728366 4_2:+52607210 Msa0606360:CDS
TAAGTCCAAACATCTCCTTG+AGG 0.730477 4_2:-52607850 None:intergenic
CGTTCTAGAGAAACTTACAG+AGG 0.745619 4_2:+52604401 Msa0606360:CDS
TCCGTCCTTAAGTGACAACG+GGG 0.757636 4_2:+52606271 Msa0606360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTATTAATATTAATGCA+AGG - chr4_2:52605908-52605927 None:intergenic 10.0%
!!! CTATTCTAAAAAATCATAAT+TGG + chr4_2:52602411-52602430 Msa0606360:intron 15.0%
!! TCATAAATTAATCATAATGA+TGG - chr4_2:52602822-52602841 None:intergenic 15.0%
!! CTAATTCAATTTACATAAAT+TGG + chr4_2:52603544-52603563 Msa0606360:intron 15.0%
!!! TATAAAGATATCTTTTTTAG+AGG - chr4_2:52606923-52606942 None:intergenic 15.0%
!! ATTATTCTTCTTTATGATCT+CGG + chr4_2:52602065-52602084 Msa0606360:five_prime_UTR 20.0%
!! AAATCTAATAGCATTAAACT+TGG - chr4_2:52602139-52602158 None:intergenic 20.0%
!!! TTAGAATAGAAAACTTTTTC+TGG - chr4_2:52602400-52602419 None:intergenic 20.0%
!! TCAATTTACATAAATTGGTA+AGG + chr4_2:52603549-52603568 Msa0606360:intron 20.0%
!! TTGATATAAATATCCAAGTT+TGG - chr4_2:52603608-52603627 None:intergenic 20.0%
!!! TGAATGCCTTTTAAATATAT+TGG + chr4_2:52604293-52604312 Msa0606360:intron 20.0%
!! ATCAGTCCAATATATTTAAA+AGG - chr4_2:52604302-52604321 None:intergenic 20.0%
!! GATACAAGTTTAATACATAA+AGG + chr4_2:52604324-52604343 Msa0606360:intron 20.0%
!!! TAGCTTTCTTGTTATATATA+TGG + chr4_2:52604490-52604509 Msa0606360:intron 20.0%
!! TTTAAATCTATCACTTATTC+AGG + chr4_2:52604970-52604989 Msa0606360:intron 20.0%
!! TTAAATCTATCACTTATTCA+GGG + chr4_2:52604971-52604990 Msa0606360:intron 20.0%
!! AAAATAAATTAAACTTCCGA+GGG - chr4_2:52605208-52605227 None:intergenic 20.0%
!!! ACGAATTTTAATTATTCAGA+TGG + chr4_2:52605699-52605718 Msa0606360:intron 20.0%
!! TTTAATTATTCAGATGGATA+AGG + chr4_2:52605705-52605724 Msa0606360:intron 20.0%
!! CTAACAAATAAAATAATGAC+CGG - chr4_2:52606154-52606173 None:intergenic 20.0%
!! TTCAATCCATTAAATTTAGA+TGG + chr4_2:52606557-52606576 Msa0606360:CDS 20.0%
!! ATGAAATTCAAGAAACAATA+AGG - chr4_2:52606787-52606806 None:intergenic 20.0%
!!! TATAGAGATATCTTTTTTAG+AGG - chr4_2:52606954-52606973 None:intergenic 20.0%
!!! AAAATTTTGTTACCAGATAT+AGG + chr4_2:52606973-52606992 Msa0606360:intron 20.0%
!! ACATGATTATATTTATATGC+AGG + chr4_2:52607109-52607128 Msa0606360:intron 20.0%
!!! TGATATATTTAGAATCTAAG+TGG + chr4_2:52607551-52607570 Msa0606360:intron 20.0%
!! AAAACAAAAAAGAATGACTA+AGG - chr4_2:52607935-52607954 None:intergenic 20.0%
!!! CAAAGTAACAGATTTTTTAC+TGG - chr4_2:52602348-52602367 None:intergenic 25.0%
! AAAAGAGAAAAAGTGATGAT+GGG - chr4_2:52602480-52602499 None:intergenic 25.0%
! AAAAAGAGAAAAAGTGATGA+TGG - chr4_2:52602481-52602500 None:intergenic 25.0%
!!! TATAACAGAAGTCTTGTTTT+TGG + chr4_2:52602613-52602632 Msa0606360:intron 25.0%
!! ACGTTTTTATCATAGTTAGT+TGG - chr4_2:52602654-52602673 None:intergenic 25.0%
! TTATTAACTACCGCAATTAA+TGG + chr4_2:52602767-52602786 Msa0606360:intron 25.0%
! TATTAACTACCGCAATTAAT+GGG + chr4_2:52602768-52602787 Msa0606360:intron 25.0%
! TAACAAAAACCCATTAATTG+CGG - chr4_2:52602780-52602799 None:intergenic 25.0%
!!! TTTTTCTCTTTTAGGAAACA+TGG + chr4_2:52602924-52602943 Msa0606360:intron 25.0%
!!! TTTTCTCTTTTAGGAAACAT+GGG + chr4_2:52602925-52602944 Msa0606360:intron 25.0%
!! ATTTAACTTACCAAATGTGT+AGG - chr4_2:52603224-52603243 None:intergenic 25.0%
!!! GGTTTTGATAATTCTAAGTT+CGG - chr4_2:52603366-52603385 None:intergenic 25.0%
! AAGTTAAGATCATGTCAATT+GGG - chr4_2:52603469-52603488 None:intergenic 25.0%
! AAAGTTAAGATCATGTCAAT+TGG - chr4_2:52603470-52603489 None:intergenic 25.0%
! TTAATGTTGATATGAACACT+TGG + chr4_2:52603499-52603518 Msa0606360:intron 25.0%
! ATTATGACACATTAGATTGA+TGG + chr4_2:52603699-52603718 Msa0606360:intron 25.0%
!!! TTCTGAATATTTGTTGTGAT+TGG + chr4_2:52603744-52603763 Msa0606360:intron 25.0%
! GTGAGTATAAATTAGTATGT+TGG + chr4_2:52603863-52603882 Msa0606360:intron 25.0%
! TATGTTAATCAAGAAGTAGA+AGG - chr4_2:52603907-52603926 None:intergenic 25.0%
! TTCTACTTCTTGATTAACAT+AGG + chr4_2:52603906-52603925 Msa0606360:intron 25.0%
!!! ATATTTTTGACTACGCAAAA+AGG + chr4_2:52604026-52604045 Msa0606360:CDS 25.0%
!!! TATTTTTGACTACGCAAAAA+GGG + chr4_2:52604027-52604046 Msa0606360:CDS 25.0%
! TATTTAACATTGGATGCAAT+GGG - chr4_2:52604533-52604552 None:intergenic 25.0%
! TTGAAAAGTAGTGACTATAA+CGG + chr4_2:52604623-52604642 Msa0606360:intron 25.0%
! TAAATCTATCACTTATTCAG+GGG + chr4_2:52604972-52604991 Msa0606360:intron 25.0%
! CAAAATAAATTAAACTTCCG+AGG - chr4_2:52605209-52605228 None:intergenic 25.0%
! AACAATCCTCAATATAATAG+TGG + chr4_2:52606023-52606042 Msa0606360:CDS 25.0%
! TATACAGGAAGGAATATAAA+AGG - chr4_2:52606078-52606097 None:intergenic 25.0%
! AAACTATTTACTATACAGGA+AGG - chr4_2:52606089-52606108 None:intergenic 25.0%
! TTCCTGTATAGTAAATAGTT+TGG + chr4_2:52606088-52606107 Msa0606360:intron 25.0%
! TACCAAACTATTTACTATAC+AGG - chr4_2:52606093-52606112 None:intergenic 25.0%
! GTTGAACCATCTAAATTTAA+TGG - chr4_2:52606566-52606585 None:intergenic 25.0%
!!! TAAGTCACTTCTTTTTTTAG+AGG + chr4_2:52606839-52606858 Msa0606360:intron 25.0%
! ATTAGCAAACATGGATATAT+GGG + chr4_2:52607083-52607102 Msa0606360:intron 25.0%
! AAAAAGAGATAATTGAACTG+TGG + chr4_2:52607315-52607334 Msa0606360:CDS 25.0%
!!! CTACTTCTTTCTTTTGTTTA+GGG + chr4_2:52607370-52607389 Msa0606360:CDS 25.0%
!!! TACTTCTTTCTTTTGTTTAG+GGG + chr4_2:52607371-52607390 Msa0606360:CDS 25.0%
! CATCAAAAAATGTTTCTTTC+AGG - chr4_2:52607448-52607467 None:intergenic 25.0%
! TCACATACTGAAATAAAAGT+AGG - chr4_2:52607534-52607553 None:intergenic 25.0%
! AATACACATATCTATCTCAA+TGG - chr4_2:52608118-52608137 None:intergenic 25.0%
! AACTGAATCATTTGAAACTC+AGG - chr4_2:52602167-52602186 None:intergenic 30.0%
!! CTTACGATTTTGAAAAACAG+AGG + chr4_2:52602268-52602287 Msa0606360:five_prime_UTR 30.0%
ATAGTGTATGCTGAAAAAGA+AGG + chr4_2:52602301-52602320 Msa0606360:five_prime_UTR 30.0%
! TTGTTCTCAAGCATTGTTTA+AGG + chr4_2:52602365-52602384 Msa0606360:intron 30.0%
TCATAATTGGTTACTGTAGA+AGG + chr4_2:52602424-52602443 Msa0606360:intron 30.0%
! TGAAGCTTTGTATCAAAGAA+TGG + chr4_2:52602519-52602538 Msa0606360:intron 30.0%
!!! TAGCATTCTGTTTTTGTCTT+TGG + chr4_2:52602681-52602700 Msa0606360:intron 30.0%
!! TCTTTGGTCTTTCTTTTTCT+TGG + chr4_2:52602697-52602716 Msa0606360:intron 30.0%
! TTTTTGTTACCTTCTTCGTT+TGG + chr4_2:52602791-52602810 Msa0606360:intron 30.0%
TAAAAGAGAAAAAGCGAAAC+GGG - chr4_2:52602917-52602936 None:intergenic 30.0%
CTAAAAGAGAAAAAGCGAAA+CGG - chr4_2:52602918-52602937 None:intergenic 30.0%
!!! AACATGGGTTGTTTTTGAAA+TGG + chr4_2:52602940-52602959 Msa0606360:five_prime_UTR 30.0%
!!! ACATGGGTTGTTTTTGAAAT+GGG + chr4_2:52602941-52602960 Msa0606360:five_prime_UTR 30.0%
TTAATTGAGGTGGAAAAAGA+GGG + chr4_2:52602973-52602992 Msa0606360:five_prime_UTR 30.0%
GTTTGGAAGTGAGAAAAAAT+GGG + chr4_2:52602995-52603014 Msa0606360:exon 30.0%
!! AGAAGATTCTTGTGTTACTT+AGG + chr4_2:52603080-52603099 Msa0606360:CDS 30.0%
GAAATTTCCTTCTCATTCAA+AGG - chr4_2:52603112-52603131 None:intergenic 30.0%
! ATGATACTACGATTTTGTAC+CGG + chr4_2:52603164-52603183 Msa0606360:CDS 30.0%
! TTGATAATTCTAAGTTCGGT+CGG - chr4_2:52603362-52603381 None:intergenic 30.0%
! AAAAGAGTACATCAAAGCTA+GGG - chr4_2:52603446-52603465 None:intergenic 30.0%
!! GTCAATTTTTATTTGCCTGT+TGG + chr4_2:52603521-52603540 Msa0606360:intron 30.0%
TGTAAATTGAATTAGCCAAC+AGG - chr4_2:52603539-52603558 None:intergenic 30.0%
!! TTGTTTTTCTTCTCCAAACT+TGG + chr4_2:52603592-52603611 Msa0606360:intron 30.0%
TATTCAGAAAAACTCTGTTC+AGG - chr4_2:52603733-52603752 None:intergenic 30.0%
!! TGAATATTTGTTGTGATTGG+TGG + chr4_2:52603747-52603766 Msa0606360:intron 30.0%
! AACATAGTGCTATTAACACA+AGG + chr4_2:52604135-52604154 Msa0606360:intron 30.0%
AATTCCTTTACCTTCACAAA+AGG - chr4_2:52604466-52604485 None:intergenic 30.0%
! TTTTGTGAAGGTAAAGGAAT+TGG + chr4_2:52604465-52604484 Msa0606360:intron 30.0%
CTATTTAACATTGGATGCAA+TGG - chr4_2:52604534-52604553 None:intergenic 30.0%
TTGCATCCAATGTTAAATAG+CGG + chr4_2:52604534-52604553 Msa0606360:intron 30.0%
! ATCTTGAACTCTTTTCATTC+AGG - chr4_2:52604768-52604787 None:intergenic 30.0%
ATCTCACCAAATTATCAGAT+TGG + chr4_2:52604786-52604805 Msa0606360:CDS 30.0%
CACATACCAATCTGATAATT+TGG - chr4_2:52604795-52604814 None:intergenic 30.0%
!! TCTGCAGAATTTTGTTGATT+TGG + chr4_2:52605060-52605079 Msa0606360:intron 30.0%
!!! AGAATTTTGTTGATTTGGCA+GGG + chr4_2:52605065-52605084 Msa0606360:intron 30.0%
TAAGTAAACTCCGGTTTATA+TGG - chr4_2:52605144-52605163 None:intergenic 30.0%
TAATGTAGTGATGTCTGATA+AGG + chr4_2:52605473-52605492 Msa0606360:CDS 30.0%
GAAAGATCAACAGATAGAAA+AGG + chr4_2:52605593-52605612 Msa0606360:CDS 30.0%
TTATCAACATGTAAGGAGTA+AGG - chr4_2:52605678-52605697 None:intergenic 30.0%
ATTCGTGTTATCAACATGTA+AGG - chr4_2:52605685-52605704 None:intergenic 30.0%
TCAGATGGATAAGGAAATTA+AGG + chr4_2:52605714-52605733 Msa0606360:intron 30.0%
GAAGGATCAGATATCTAAAA+AGG + chr4_2:52605798-52605817 Msa0606360:CDS 30.0%
ACGAGCAAATACAAATTTAG+AGG - chr4_2:52605875-52605894 None:intergenic 30.0%
AACTCTCTAATGCATATGTT+GGG - chr4_2:52606002-52606021 None:intergenic 30.0%
ATCACAAATTAACTAGAAGC+CGG + chr4_2:52606420-52606439 Msa0606360:CDS 30.0%
! ATGGTTCAACAAGATTTTCA+AGG + chr4_2:52606576-52606595 Msa0606360:CDS 30.0%
CATTAGCAAACATGGATATA+TGG + chr4_2:52607082-52607101 Msa0606360:intron 30.0%
! TCATTCTTTTCTGAATTGCA+GGG + chr4_2:52607185-52607204 Msa0606360:intron 30.0%
CCTAAACAAAAGAAAGAAGT+AGG - chr4_2:52607372-52607391 None:intergenic 30.0%
!! CCTACTTCTTTCTTTTGTTT+AGG + chr4_2:52607369-52607388 Msa0606360:CDS 30.0%
ACAAACAGATTCCATTTACA+TGG + chr4_2:52607397-52607416 Msa0606360:CDS 30.0%
!! TGTTGACATGTGTTTGTTTT+GGG + chr4_2:52607593-52607612 Msa0606360:intron 30.0%
AAATGCTTATGAAGCTTATG+CGG + chr4_2:52607648-52607667 Msa0606360:CDS 30.0%
GAAAAGGCTATTTAACGAAT+GGG + chr4_2:52607694-52607713 Msa0606360:CDS 30.0%
AAAAGGCTATTTAACGAATG+GGG + chr4_2:52607695-52607714 Msa0606360:CDS 30.0%
TGCTAATATACGTCTTCATT+AGG + chr4_2:52607973-52607992 Msa0606360:three_prime_UTR 30.0%
ATACAAACTACTCACTTTAG+AGG + chr4_2:52608068-52608087 Msa0606360:three_prime_UTR 30.0%
ACTATTAACCTACATTCTAG+AGG + chr4_2:52608138-52608157 Msa0606360:three_prime_UTR 30.0%
CTATTAACCTACATTCTAGA+GGG + chr4_2:52608139-52608158 Msa0606360:three_prime_UTR 30.0%
ATTGTATCGTATCGCTATTA+TGG + chr4_2:52608171-52608190 Msa0606360:three_prime_UTR 30.0%
! TTTTAATCATTTTCCTCCTC+TGG + chr4_2:52608290-52608309 Msa0606360:three_prime_UTR 30.0%
! ACTTCTTTTTCTTCAGATCG+TGG + chr4_2:52601947-52601966 Msa0606360:five_prime_UTR 35.0%
TGTATGCTGAAAAAGAAGGT+AGG + chr4_2:52602305-52602324 Msa0606360:intron 35.0%
!! TTACTGGTTCCTAACAAAAC+AGG - chr4_2:52602332-52602351 None:intergenic 35.0%
! TTCTCAAGCATTGTTTAAGG+TGG + chr4_2:52602368-52602387 Msa0606360:intron 35.0%
AATTGGTTACTGTAGAAGGA+AGG + chr4_2:52602428-52602447 Msa0606360:intron 35.0%
GGTTTCAAATACATGAGTTC+TGG + chr4_2:52602449-52602468 Msa0606360:intron 35.0%
! TGGTCTTTCTTTTTCTTGGT+TGG + chr4_2:52602701-52602720 Msa0606360:intron 35.0%
ATGGATTTACCAAACGAAGA+AGG - chr4_2:52602803-52602822 None:intergenic 35.0%
!!! CGTTTCGCTTTTTCTCTTTT+AGG + chr4_2:52602916-52602935 Msa0606360:intron 35.0%
!! TGGGATTAGCTTGTTAATTG+AGG + chr4_2:52602960-52602979 Msa0606360:five_prime_UTR 35.0%
!! GATTAGCTTGTTAATTGAGG+TGG + chr4_2:52602963-52602982 Msa0606360:five_prime_UTR 35.0%
GTTAATTGAGGTGGAAAAAG+AGG + chr4_2:52602972-52602991 Msa0606360:five_prime_UTR 35.0%
GGTTTGGAAGTGAGAAAAAA+TGG + chr4_2:52602994-52603013 Msa0606360:exon 35.0%
!! TTCTTGTGTTACTTAGGCTT+AGG + chr4_2:52603086-52603105 Msa0606360:CDS 35.0%
TGCTAATGAATCTGCAGATT+GGG + chr4_2:52603132-52603151 Msa0606360:CDS 35.0%
TGATAATTCTAAGTTCGGTC+GGG - chr4_2:52603361-52603380 None:intergenic 35.0%
AGTCTTAATCCTCAGTTTCA+GGG - chr4_2:52603395-52603414 None:intergenic 35.0%
! GAAAAGAGTACATCAAAGCT+AGG - chr4_2:52603447-52603466 None:intergenic 35.0%
GTTAATCAAGAAGTAGAAGG+TGG - chr4_2:52603904-52603923 None:intergenic 35.0%
!! TCAGCGAGTATTTTTGCATA+TGG + chr4_2:52603944-52603963 Msa0606360:intron 35.0%
!! CAGCGAGTATTTTTGCATAT+GGG + chr4_2:52603945-52603964 Msa0606360:intron 35.0%
CAGTGGAAAGACATATACTA+TGG + chr4_2:52603976-52603995 Msa0606360:CDS 35.0%
GGAAAGACATATACTATGGT+CGG + chr4_2:52603980-52603999 Msa0606360:CDS 35.0%
!! ATTTAAAAGGCATTCACCTC+AGG - chr4_2:52604289-52604308 None:intergenic 35.0%
! GTTTTCCCTTTTTGTTAGAG+AGG + chr4_2:52604375-52604394 Msa0606360:intron 35.0%
!! TCTGTAAGTTTCTCTAGAAC+GGG - chr4_2:52604402-52604421 None:intergenic 35.0%
! CTCTGTAAGTTTCTCTAGAA+CGG - chr4_2:52604403-52604422 None:intergenic 35.0%
CTTTACCTTCACAAAAGGAT+AGG - chr4_2:52604461-52604480 None:intergenic 35.0%
! CTATCCTTTTGTGAAGGTAA+AGG + chr4_2:52604459-52604478 Msa0606360:intron 35.0%
TAATTGCAGATCGCAGAAAA+TGG - chr4_2:52604688-52604707 None:intergenic 35.0%
AGAACTTTCAATGGTCTGAA+AGG - chr4_2:52604885-52604904 None:intergenic 35.0%
ACTTACTACACTAGCTGATA+GGG - chr4_2:52604942-52604961 None:intergenic 35.0%
AACTTACTACACTAGCTGAT+AGG - chr4_2:52604943-52604962 None:intergenic 35.0%
ATTCAGGGGATAAAATAGTC+AGG + chr4_2:52604986-52605005 Msa0606360:intron 35.0%
TTCAGGGGATAAAATAGTCA+GGG + chr4_2:52604987-52605006 Msa0606360:intron 35.0%
!!! CAGAATTTTGTTGATTTGGC+AGG + chr4_2:52605064-52605083 Msa0606360:intron 35.0%
AAGAAGGTTGCCATATAAAC+CGG + chr4_2:52605131-52605150 Msa0606360:CDS 35.0%
TCGAAAGAGTAAGTAAACTC+CGG - chr4_2:52605153-52605172 None:intergenic 35.0%
TAATGTGTCTGAATGCAGTA+AGG + chr4_2:52605266-52605285 Msa0606360:intron 35.0%
AATGTGTCTGAATGCAGTAA+GGG + chr4_2:52605267-52605286 Msa0606360:intron 35.0%
TACATTAACCTGTGCTTTAG+TGG - chr4_2:52605460-52605479 None:intergenic 35.0%
! TTTTTGCAATTGCTTGACCA+AGG - chr4_2:52605499-52605518 None:intergenic 35.0%
CAAGCAATTGCAAAAAGAGT+TGG + chr4_2:52605503-52605522 Msa0606360:CDS 35.0%
CAAAGCTACATAATCAGTGT+TGG - chr4_2:52605565-52605584 None:intergenic 35.0%
TTTGGCAGGAAGAAGATTTA+TGG + chr4_2:52605934-52605953 Msa0606360:intron 35.0%
TTGGCAGGAAGAAGATTTAT+GGG + chr4_2:52605935-52605954 Msa0606360:intron 35.0%
GAACTCTCTAATGCATATGT+TGG - chr4_2:52606003-52606022 None:intergenic 35.0%
CTGTCTCCACTATTATATTG+AGG - chr4_2:52606032-52606051 None:intergenic 35.0%
! CAATATAATAGTGGAGACAG+TGG + chr4_2:52606032-52606051 Msa0606360:CDS 35.0%
GAGTAGAATTGAATGATGTC+CGG + chr4_2:52606132-52606151 Msa0606360:intron 35.0%
CTTCTTTGCAGTATTCATCA+AGG - chr4_2:52606199-52606218 None:intergenic 35.0%
TCAAATGTGTAGACATTTCC+TGG - chr4_2:52606337-52606356 None:intergenic 35.0%
CATGTAGAGATTGTTCATCA+TGG - chr4_2:52606370-52606389 None:intergenic 35.0%
ATTTGACATGTTTCCTGACA+TGG - chr4_2:52606393-52606412 None:intergenic 35.0%
!!! CCTTTTTCAAACCCATTGAA+TGG - chr4_2:52606503-52606522 None:intergenic 35.0%
! CCATTCAATGGGTTTGAAAA+AGG + chr4_2:52606500-52606519 Msa0606360:CDS 35.0%
AACTTTCTCCATAAACCATC+TGG - chr4_2:52606539-52606558 None:intergenic 35.0%
AACGATTCTCAGTCTTCTAT+TGG + chr4_2:52606599-52606618 Msa0606360:CDS 35.0%
!! TATGAAAAGCAGCTTGTTGA+TGG + chr4_2:52606734-52606753 Msa0606360:CDS 35.0%
TTCCTAGACATTAGCAAACA+TGG + chr4_2:52607074-52607093 Msa0606360:intron 35.0%
! ATCCATGTTTGCTAATGTCT+AGG - chr4_2:52607079-52607098 None:intergenic 35.0%
CATCAAGATGTAGATTGTAG+TGG - chr4_2:52607146-52607165 None:intergenic 35.0%
CTGCAATTCAGAAAAGAATG+AGG - chr4_2:52607186-52607205 None:intergenic 35.0%
! CTCATTCTTTTCTGAATTGC+AGG + chr4_2:52607184-52607203 Msa0606360:intron 35.0%
AACAGATTCCATTTACATGG+AGG + chr4_2:52607400-52607419 Msa0606360:CDS 35.0%
TTGAAGTTAACGTGATTGTC+TGG - chr4_2:52607493-52607512 None:intergenic 35.0%
AGACAATCACGTTAACTTCA+AGG + chr4_2:52607492-52607511 Msa0606360:CDS 35.0%
AAACAAACACATGTCAACAC+AGG - chr4_2:52607592-52607611 None:intergenic 35.0%
!! GTGTTGACATGTGTTTGTTT+TGG + chr4_2:52607592-52607611 Msa0606360:intron 35.0%
GGAAAAGGCTATTTAACGAA+TGG + chr4_2:52607693-52607712 Msa0606360:CDS 35.0%
TATCAGTGTTGCACCATAAA+CGG - chr4_2:52607763-52607782 None:intergenic 35.0%
! CTCTTGAACTTTTCCATGAA+TGG - chr4_2:52607904-52607923 None:intergenic 35.0%
! GTATATTAGCAATGCCACTT+TGG - chr4_2:52607964-52607983 None:intergenic 35.0%
!! AATACAACCCTCTAGAATGT+AGG - chr4_2:52608149-52608168 None:intergenic 35.0%
TTCCTTCTTGCTGCAAATTA+AGG + chr4_2:52608237-52608256 Msa0606360:three_prime_UTR 35.0%
!! AACCTTAATTTGCAGCAAGA+AGG - chr4_2:52608242-52608261 None:intergenic 35.0%
!!! TGTTTTAATATGTCCAGAGG+AGG - chr4_2:52608306-52608325 None:intergenic 35.0%
!!! CGATGTTTTAATATGTCCAG+AGG - chr4_2:52608309-52608328 None:intergenic 35.0%
! TCTTTATGATCTCGGTGTGT+CGG + chr4_2:52602073-52602092 Msa0606360:five_prime_UTR 40.0%
!! AAGGTAGGACCTGTTTTGTT+AGG + chr4_2:52602320-52602339 Msa0606360:intron 40.0%
! CAAATACATGAGTTCTGGTG+TGG + chr4_2:52602454-52602473 Msa0606360:intron 40.0%
GAAAAAATGGGAGCTATTGC+TGG + chr4_2:52603007-52603026 Msa0606360:exon 40.0%
TGGAGAAGAGTTGTCGAAAT+GGG + chr4_2:52603027-52603046 Msa0606360:CDS 40.0%
TCGAAATGGGAGAAGATGAA+TGG + chr4_2:52603040-52603059 Msa0606360:CDS 40.0%
GAGAAGATGAATGGAGTTAG+TGG + chr4_2:52603049-52603068 Msa0606360:CDS 40.0%
CTGCTAATGAATCTGCAGAT+TGG + chr4_2:52603131-52603150 Msa0606360:CDS 40.0%
AACCTTCACGCAATGTATTC+CGG - chr4_2:52603186-52603205 None:intergenic 40.0%
TTTCCAAGTGCCTACACATT+TGG + chr4_2:52603211-52603230 Msa0606360:CDS 40.0%
TTACCAAATGTGTAGGCACT+TGG - chr4_2:52603217-52603236 None:intergenic 40.0%
GAGTCTTAATCCTCAGTTTC+AGG - chr4_2:52603396-52603415 None:intergenic 40.0%
TGAAACGAAGCAGGTATATG+AGG + chr4_2:52603795-52603814 Msa0606360:CDS 40.0%
GAAATCGCTCTTTCAGTAGT+CGG + chr4_2:52603829-52603848 Msa0606360:CDS 40.0%
GCTTCAGTATCATTGTTCTC+TGG + chr4_2:52604094-52604113 Msa0606360:intron 40.0%
!! CGTTCTAGAGAAACTTACAG+AGG + chr4_2:52604401-52604420 Msa0606360:CDS 40.0%
ATAGCGCCGCTATTTAACAT+TGG - chr4_2:52604543-52604562 None:intergenic 40.0%
TCAGGGGATAAAATAGTCAG+GGG + chr4_2:52604988-52605007 Msa0606360:intron 40.0%
AGAAGTTACCACTAAAGCAC+AGG + chr4_2:52605449-52605468 Msa0606360:CDS 40.0%
AATTGCAAAAAGAGTTGGCC+AGG + chr4_2:52605508-52605527 Msa0606360:CDS 40.0%
! AGCTACATAATCAGTGTTGG+AGG - chr4_2:52605562-52605581 None:intergenic 40.0%
AACGTGATCTTGCTGAATCA+AGG + chr4_2:52605749-52605768 Msa0606360:CDS 40.0%
TCTTGCTGAATCAAGGATTG+AGG + chr4_2:52605756-52605775 Msa0606360:CDS 40.0%
!! GACAGTGGAAGTATTCAAGA+TGG + chr4_2:52606047-52606066 Msa0606360:CDS 40.0%
!! GATTTGGCTTTGACAGTATC+TGG + chr4_2:52606293-52606312 Msa0606360:CDS 40.0%
! ATAAACCATCTGGTCTTCCA+GGG - chr4_2:52606529-52606548 None:intergenic 40.0%
! AGCATCCATACTTTTGTTGC+TGG + chr4_2:52606686-52606705 Msa0606360:CDS 40.0%
! GCATCCATACTTTTGTTGCT+GGG + chr4_2:52606687-52606706 Msa0606360:CDS 40.0%
TCATCCCAGCAACAAAAGTA+TGG - chr4_2:52606694-52606713 None:intergenic 40.0%
TGTTGCTGGGATGAAAGAAA+TGG + chr4_2:52606700-52606719 Msa0606360:CDS 40.0%
GTTACGACAAGTCCTATATC+TGG - chr4_2:52606988-52607007 None:intergenic 40.0%
GACACAGATACGATACTACA+TGG - chr4_2:52607035-52607054 None:intergenic 40.0%
AGGAGACAGATAGAAAACTG+AGG + chr4_2:52607210-52607229 Msa0606360:CDS 40.0%
CTGAGGAATGTGAAAGATGT+AGG + chr4_2:52607227-52607246 Msa0606360:CDS 40.0%
AAGAAAGAAGTAGGTCCTGT+GGG - chr4_2:52607363-52607382 None:intergenic 40.0%
AAAGAAAGAAGTAGGTCCTG+TGG - chr4_2:52607364-52607383 None:intergenic 40.0%
AAGCTCTACCTCCATGTAAA+TGG - chr4_2:52607411-52607430 None:intergenic 40.0%
TTATGAAGCTTATGCGGAAG+AGG + chr4_2:52607654-52607673 Msa0606360:CDS 40.0%
! TTTCTGAGGAAGAGAGGAAA+AGG + chr4_2:52607678-52607697 Msa0606360:CDS 40.0%
CTATTTAACGAATGGGGCAT+TGG + chr4_2:52607701-52607720 Msa0606360:CDS 40.0%
TTGGATTGAATTCAAAGCGC+AGG + chr4_2:52607720-52607739 Msa0606360:CDS 40.0%
AAGTCCAAACATCTCCTTGA+GGG - chr4_2:52607852-52607871 None:intergenic 40.0%
TAAGTCCAAACATCTCCTTG+AGG - chr4_2:52607853-52607872 None:intergenic 40.0%
!!! TTTGTTTTGCGTCTCCAAAG+TGG + chr4_2:52607947-52607966 Msa0606360:three_prime_UTR 40.0%
! TCAATGGAGAGACTTGTTTC+GGG - chr4_2:52608102-52608121 None:intergenic 40.0%
! CTCAATGGAGAGACTTGTTT+CGG - chr4_2:52608103-52608122 None:intergenic 40.0%
AGACAGTCAAATTCGTCATC+TGG - chr4_2:52608207-52608226 None:intergenic 40.0%
TGAAACAGTTGCGATGTCTC+TGG + chr4_2:52602205-52602224 Msa0606360:five_prime_UTR 45.0%
GAAACAGTTGCGATGTCTCT+GGG + chr4_2:52602206-52602225 Msa0606360:five_prime_UTR 45.0%
TTGTGTGTTAGTGTCGTGTC+TGG - chr4_2:52602245-52602264 None:intergenic 45.0%
TGAGGTGGAAAAAGAGGGTT+TGG + chr4_2:52602978-52602997 Msa0606360:five_prime_UTR 45.0%
CTGGAGAAGAGTTGTCGAAA+TGG + chr4_2:52603026-52603045 Msa0606360:CDS 45.0%
GCTTAGGCCTTTGAATGAGA+AGG + chr4_2:52603102-52603121 Msa0606360:CDS 45.0%
TACCGGAATACATTGCGTGA+AGG + chr4_2:52603181-52603200 Msa0606360:CDS 45.0%
ATTCTAAGTTCGGTCGGGTT+TGG - chr4_2:52603356-52603375 None:intergenic 45.0%
ATCCTCAGTTTCAGGGAGAA+GGG - chr4_2:52603388-52603407 None:intergenic 45.0%
AATCCTCAGTTTCAGGGAGA+AGG - chr4_2:52603389-52603408 None:intergenic 45.0%
! TGGTGGCAGACAGAGTATTT+CGG + chr4_2:52603764-52603783 Msa0606360:intron 45.0%
ACGAAGCAGGTATATGAGGA+AGG + chr4_2:52603799-52603818 Msa0606360:CDS 45.0%
AGGTATATGAGGAAGGAGCT+AGG + chr4_2:52603806-52603825 Msa0606360:CDS 45.0%
GGTATATGAGGAAGGAGCTA+GGG + chr4_2:52603807-52603826 Msa0606360:CDS 45.0%
CGGGTCCTCTCTAACAAAAA+GGG - chr4_2:52604383-52604402 None:intergenic 45.0%
ACGGGTCCTCTCTAACAAAA+AGG - chr4_2:52604384-52604403 None:intergenic 45.0%
ACTTACAGAGGAGACTCTAC+AGG + chr4_2:52604413-52604432 Msa0606360:CDS 45.0%
AGAGGAGACTCTACAGGATT+GGG + chr4_2:52604419-52604438 Msa0606360:CDS 45.0%
! GAGCTCCTATCCTTTTGTGA+AGG + chr4_2:52604453-52604472 Msa0606360:CDS 45.0%
GTCTCTGAGCTGCAAGAATA+AGG - chr4_2:52604729-52604748 None:intergenic 45.0%
AGACCATTGAAAGTTCTGCC+AGG + chr4_2:52604888-52604907 Msa0606360:intron 45.0%
GACCATTGAAAGTTCTGCCA+GGG + chr4_2:52604889-52604908 Msa0606360:intron 45.0%
TTCCCTGGCAGAACTTTCAA+TGG - chr4_2:52604894-52604913 None:intergenic 45.0%
AAGTTCTGCCAGGGAATTTC+TGG + chr4_2:52604898-52604917 Msa0606360:CDS 45.0%
AGTTCTGCCAGGGAATTTCT+GGG + chr4_2:52604899-52604918 Msa0606360:CDS 45.0%
TACTACACTAGCTGATAGGG+TGG - chr4_2:52604939-52604958 None:intergenic 45.0%
CATCTCAGGTATCATCAGCT+GGG + chr4_2:52605098-52605117 Msa0606360:CDS 45.0%
ATCTCAGGTATCATCAGCTG+GGG + chr4_2:52605099-52605118 Msa0606360:CDS 45.0%
CAACCTCAGCTTACGAATGA+CGG - chr4_2:52605176-52605195 None:intergenic 45.0%
GAATGCAGTAAGGGAAGACA+TGG + chr4_2:52605276-52605295 Msa0606360:intron 45.0%
AGTGATGTCTGATAAGGCCT+TGG + chr4_2:52605479-52605498 Msa0606360:CDS 45.0%
!! TTTTAACTCGCCTTCCAACC+TGG - chr4_2:52605529-52605548 None:intergenic 45.0%
! TAATCAGTGTTGGAGGTAGC+AGG - chr4_2:52605555-52605574 None:intergenic 45.0%
TCAGAGTCCTCAAGCATTTG+TGG + chr4_2:52605975-52605994 Msa0606360:CDS 45.0%
AGAAGTTCGATGTGTCGAGT+TGG + chr4_2:52606214-52606233 Msa0606360:CDS 45.0%
GATCCGTCCTTAAGTGACAA+CGG + chr4_2:52606269-52606288 Msa0606360:CDS 45.0%
ATCCGTCCTTAAGTGACAAC+GGG + chr4_2:52606270-52606289 Msa0606360:CDS 45.0%
! CAAATCCCCGTTGTCACTTA+AGG - chr4_2:52606279-52606298 None:intergenic 45.0%
CTTAAGTGACAACGGGGATT+TGG + chr4_2:52606277-52606296 Msa0606360:CDS 45.0%
!! TTGGCTTTGACAGTATCTGG+AGG + chr4_2:52606296-52606315 Msa0606360:CDS 45.0%
!! TGGCTTTGACAGTATCTGGA+GGG + chr4_2:52606297-52606316 Msa0606360:CDS 45.0%
ACAGTATCTGGAGGGGAAAA+TGG + chr4_2:52606305-52606324 Msa0606360:CDS 45.0%
CAATCTCTACATGCCATGTC+AGG + chr4_2:52606377-52606396 Msa0606360:CDS 45.0%
AACTAGAAGCCGGAGTTGTT+CGG + chr4_2:52606430-52606449 Msa0606360:CDS 45.0%
TCTCCATTTCTCCTGTCTCA+GGG - chr4_2:52606475-52606494 None:intergenic 45.0%
GGGTTTGAAAAAGGATTCCC+TGG + chr4_2:52606509-52606528 Msa0606360:CDS 45.0%
! CATAAACCATCTGGTCTTCC+AGG - chr4_2:52606530-52606549 None:intergenic 45.0%
CTGGAAGACCAGATGGTTTA+TGG + chr4_2:52606528-52606547 Msa0606360:CDS 45.0%
TTCTATTGGAAGTCCGTCAG+TGG + chr4_2:52606613-52606632 Msa0606360:CDS 45.0%
ATCTCAAGCTGTTGCCTCTA+AGG - chr4_2:52606643-52606662 None:intergenic 45.0%
! CTTGAGATCATCTGGTGATG+AGG + chr4_2:52606655-52606674 Msa0606360:CDS 45.0%
!! AAAGCAGCTTGTTGATGGTC+AGG + chr4_2:52606739-52606758 Msa0606360:CDS 45.0%
ATCGTATCTGTGTCCGTACT+AGG + chr4_2:52607041-52607060 Msa0606360:intron 45.0%
GCTAATGTCTAGGAAACCCA+GGG - chr4_2:52607069-52607088 None:intergenic 45.0%
TGCTAATGTCTAGGAAACCC+AGG - chr4_2:52607070-52607089 None:intergenic 45.0%
! CTTTTCTGAATTGCAGGGTC+AGG + chr4_2:52607190-52607209 Msa0606360:intron 45.0%
!! TGTAGGTGTTGATCCAATGC+AGG + chr4_2:52607244-52607263 Msa0606360:CDS 45.0%
AACTGCAGAGACCAGTCTAA+AGG - chr4_2:52607284-52607303 None:intergenic 45.0%
GCTATGTACCATTAACCCAC+AGG + chr4_2:52607345-52607364 Msa0606360:CDS 45.0%
! AAGTAGGTCCTGTGGGTTAA+TGG - chr4_2:52607356-52607375 None:intergenic 45.0%
! CTAGTGAGGTTTTCAGAGCA+GGG + chr4_2:52607821-52607840 Msa0606360:CDS 45.0%
! TCATTAGGAGTGTGTACAGC+AGG + chr4_2:52607988-52608007 Msa0606360:three_prime_UTR 45.0%
! CATTAGGAGTGTGTACAGCA+GGG + chr4_2:52607989-52608008 Msa0606360:three_prime_UTR 45.0%
!!! TTAATTCTATAAATTTTTTT+CGG + chr4_2:52602103-52602122 Msa0606360:five_prime_UTR 5.0%
!! CATATTTATAATTTATAATA+TGG - chr4_2:52602558-52602577 None:intergenic 5.0%
TCCTCAGTTTCAGGGAGAAG+GGG - chr4_2:52603387-52603406 None:intergenic 50.0%
! GGTGGCAGACAGAGTATTTC+GGG + chr4_2:52603765-52603784 Msa0606360:intron 50.0%
! GTGGCAGACAGAGTATTTCG+GGG + chr4_2:52603766-52603785 Msa0606360:intron 50.0%
ATCGCTCTTTCAGTAGTCGG+TGG + chr4_2:52603832-52603851 Msa0606360:CDS 50.0%
GCATATGGGCAAACAAGCAG+TGG + chr4_2:52603959-52603978 Msa0606360:CDS 50.0%
! GCACTGACAACACTCCACTT+AGG + chr4_2:52604251-52604270 Msa0606360:CDS 50.0%
GGATCATCACGCAACCTAAG+TGG - chr4_2:52604268-52604287 None:intergenic 50.0%
TAGGTTGCGTGATGATCCTG+AGG + chr4_2:52604270-52604289 Msa0606360:CDS 50.0%
CAGAGGAGACTCTACAGGAT+TGG + chr4_2:52604418-52604437 Msa0606360:CDS 50.0%
GAGGAGACTCTACAGGATTG+GGG + chr4_2:52604420-52604439 Msa0606360:CDS 50.0%
AGGAGACTCTACAGGATTGG+GGG + chr4_2:52604421-52604440 Msa0606360:CDS 50.0%
CTTGCAGCTCAGAGACAAGT+AGG + chr4_2:52604733-52604752 Msa0606360:intron 50.0%
TCCTTTGCCCAGAAATTCCC+TGG - chr4_2:52604909-52604928 None:intergenic 50.0%
GCATCTCAGGTATCATCAGC+TGG + chr4_2:52605097-52605116 Msa0606360:CDS 50.0%
GCTGGGGTGAGATTGAAAGA+AGG + chr4_2:52605115-52605134 Msa0606360:CDS 50.0%
GAGGTTGTTCACTTCACCCT+CGG + chr4_2:52605189-52605208 Msa0606360:intron 50.0%
ATACTGCAGCCTTGCTTAGG+TGG + chr4_2:52605333-52605352 Msa0606360:CDS 50.0%
CTAGCATTGCCACCTAAGCA+AGG - chr4_2:52605345-52605364 None:intergenic 50.0%
TTTGCACTTTGAGCCCTGCA+CGG + chr4_2:52605376-52605395 Msa0606360:CDS 50.0%
GTTCAACATGACTCCGTGCA+GGG - chr4_2:52605392-52605411 None:intergenic 50.0%
TGTTCAACATGACTCCGTGC+AGG - chr4_2:52605393-52605412 None:intergenic 50.0%
GCAAAAAGAGTTGGCCAGGT+TGG + chr4_2:52605512-52605531 Msa0606360:CDS 50.0%
! AAAGAGTTGGCCAGGTTGGA+AGG + chr4_2:52605516-52605535 Msa0606360:CDS 50.0%
!! GATTGAGGATTTGCTGCGCA+TGG + chr4_2:52605771-52605790 Msa0606360:CDS 50.0%
GTTGGGACCACAAATGCTTG+AGG - chr4_2:52605985-52606004 None:intergenic 50.0%
TCCGTCCTTAAGTGACAACG+GGG + chr4_2:52606271-52606290 Msa0606360:CDS 50.0%
! TCCCCGTTGTCACTTAAGGA+CGG - chr4_2:52606275-52606294 None:intergenic 50.0%
! GGCTTTGACAGTATCTGGAG+GGG + chr4_2:52606298-52606317 Msa0606360:CDS 50.0%
AGGGGAAAATGGAACAAGCC+AGG + chr4_2:52606316-52606335 Msa0606360:CDS 50.0%
TGTGATGCTCCGAACAACTC+CGG - chr4_2:52606442-52606461 None:intergenic 50.0%
TTCCCCTGAGACAGGAGAAA+TGG + chr4_2:52606469-52606488 Msa0606360:CDS 50.0%
CTCCATTTCTCCTGTCTCAG+GGG - chr4_2:52606474-52606493 None:intergenic 50.0%
CTCTCCATTTCTCCTGTCTC+AGG - chr4_2:52606476-52606495 None:intergenic 50.0%
CTGAGACAGGAGAAATGGAG+AGG + chr4_2:52606474-52606493 Msa0606360:CDS 50.0%
ATGGAGAGGACGCCATTCAA+TGG + chr4_2:52606488-52606507 Msa0606360:CDS 50.0%
TGGAGAGGACGCCATTCAAT+GGG + chr4_2:52606489-52606508 Msa0606360:CDS 50.0%
!! CCTCTAAGGTCATCCACTGA+CGG - chr4_2:52606629-52606648 None:intergenic 50.0%
GGCAACAGCTTGAGATCATC+TGG + chr4_2:52606647-52606666 Msa0606360:CDS 50.0%
! GAAACCCAGGGTACCTAGTA+CGG - chr4_2:52607057-52607076 None:intergenic 50.0%
!! AGGTGTTGATCCAATGCAGG+AGG + chr4_2:52607247-52607266 Msa0606360:CDS 50.0%
CACCAGGAACTCCTTTAGAC+TGG + chr4_2:52607270-52607289 Msa0606360:CDS 50.0%
GACCAGTCTAAAGGAGTTCC+TGG - chr4_2:52607275-52607294 None:intergenic 50.0%
! ACTGGTCTCTGCAGTTCAAG+AGG + chr4_2:52607288-52607307 Msa0606360:CDS 50.0%
TCTGGCTGTCTTTCTCAGAC+TGG - chr4_2:52607475-52607494 None:intergenic 50.0%
GACACAGTGTGAGAGCTCTT+CGG + chr4_2:52607615-52607634 Msa0606360:intron 50.0%
TATGCGGAAGAGGCTTTCTG+AGG + chr4_2:52607664-52607683 Msa0606360:CDS 50.0%
! AGAGGCTTTCTGAGGAAGAG+AGG + chr4_2:52607672-52607691 Msa0606360:CDS 50.0%
TGCAGCTAGCAGACCGTTTA+TGG + chr4_2:52607747-52607766 Msa0606360:CDS 50.0%
TTGCAGCACTCTGCATTACG+TGG - chr4_2:52607790-52607809 None:intergenic 50.0%
!! AGAGTGCTGCAATAGTTGCG+AGG + chr4_2:52607798-52607817 Msa0606360:CDS 50.0%
CAATAGTTGCGAGGCTAGTG+AGG + chr4_2:52607807-52607826 Msa0606360:CDS 50.0%
! GCTAGTGAGGTTTTCAGAGC+AGG + chr4_2:52607820-52607839 Msa0606360:CDS 50.0%
GCTTCACACCTCAGCTAACA+CGG + chr4_2:52607873-52607892 Msa0606360:CDS 50.0%
TAACACGGCGAAGCCATTCA+TGG + chr4_2:52607888-52607907 Msa0606360:CDS 50.0%
!! CGATGTCTCTGGGACAGACA+CGG + chr4_2:52602216-52602235 Msa0606360:five_prime_UTR 55.0%
ACCCCTTCTCCCTGAAACTG+AGG + chr4_2:52603383-52603402 Msa0606360:intron 55.0%
GGGTGACTGTGAAACGAAGC+AGG + chr4_2:52603786-52603805 Msa0606360:CDS 55.0%
GCGCTATAGCGCTGCAGAAT+TGG + chr4_2:52604556-52604575 Msa0606360:intron 55.0%
! GCCAGGGAATTTCTGGGCAA+AGG + chr4_2:52604905-52604924 Msa0606360:CDS 55.0%
CGACCGTCATTCGTAAGCTG+AGG + chr4_2:52605170-52605189 Msa0606360:CDS 55.0%
CGCATACTGCAGCCTTGCTT+AGG + chr4_2:52605330-52605349 Msa0606360:CDS 55.0%
!! TGAGGATTTGCTGCGCATGG+TGG + chr4_2:52605774-52605793 Msa0606360:CDS 55.0%
!! GAGGATTTGCTGCGCATGGT+GGG + chr4_2:52605775-52605794 Msa0606360:CDS 55.0%
!! AGGATTTGCTGCGCATGGTG+GGG + chr4_2:52605776-52605795 Msa0606360:CDS 55.0%
ATGACTGCTTCCCCTGAGAC+AGG + chr4_2:52606461-52606480 Msa0606360:CDS 55.0%
GGATTCCCTGGAAGACCAGA+TGG + chr4_2:52606521-52606540 Msa0606360:CDS 55.0%
CCGTCAGTGGATGACCTTAG+AGG + chr4_2:52606626-52606645 Msa0606360:CDS 55.0%
TGTGTCCGTACTAGGTACCC+TGG + chr4_2:52607049-52607068 Msa0606360:intron 55.0%
GTGTCCGTACTAGGTACCCT+GGG + chr4_2:52607050-52607069 Msa0606360:intron 55.0%
ACAGTGTGAGAGCTCTTCGG+CGG + chr4_2:52607618-52607637 Msa0606360:intron 55.0%
CGAGCCCTCAAGGAGATGTT+TGG + chr4_2:52607845-52607864 Msa0606360:CDS 55.0%
! TTTGCTGCGCATGGTGGGGA+AGG + chr4_2:52605780-52605799 Msa0606360:CDS 60.0%
!! GATCCAATGCAGGAGGCACC+AGG + chr4_2:52607254-52607273 Msa0606360:CDS 60.0%
GTTCCTGGTGCCTCCTGCAT+TGG - chr4_2:52607260-52607279 None:intergenic 60.0%
CAGTGTGAGAGCTCTTCGGC+GGG + chr4_2:52607619-52607638 Msa0606360:intron 60.0%
TGGCTTCGCCGTGTTAGCTG+AGG - chr4_2:52607884-52607903 None:intergenic 60.0%
AGGGAGCGAGCGTGCATCTC+AGG + chr4_2:52605084-52605103 Msa0606360:CDS 65.0%
AGAGCAGGGACGAGCCCTCA+AGG + chr4_2:52607835-52607854 Msa0606360:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 52601933 52608363 52601933 ID=Msa0606360;Name=Msa0606360
chr4_2 mRNA 52601933 52608363 52601933 ID=Msa0606360-mRNA-1;Parent=Msa0606360;Name=Msa0606360-mRNA-1;_AED=0.11;_eAED=0.11;_QI=465|1|1|1|0.92|0.86|15|426|873
chr4_2 exon 52601933 52602322 52601933 ID=Msa0606360-mRNA-1:exon:12915;Parent=Msa0606360-mRNA-1
chr4_2 exon 52602938 52603232 52602938 ID=Msa0606360-mRNA-1:exon:12916;Parent=Msa0606360-mRNA-1
chr4_2 exon 52603773 52603862 52603773 ID=Msa0606360-mRNA-1:exon:12917;Parent=Msa0606360-mRNA-1
chr4_2 exon 52603948 52604048 52603948 ID=Msa0606360-mRNA-1:exon:12918;Parent=Msa0606360-mRNA-1
chr4_2 exon 52604178 52604291 52604178 ID=Msa0606360-mRNA-1:exon:12919;Parent=Msa0606360-mRNA-1
chr4_2 exon 52604393 52604474 52604393 ID=Msa0606360-mRNA-1:exon:12920;Parent=Msa0606360-mRNA-1
chr4_2 exon 52604740 52604807 52604740 ID=Msa0606360-mRNA-1:exon:12921;Parent=Msa0606360-mRNA-1
chr4_2 exon 52604890 52604955 52604890 ID=Msa0606360-mRNA-1:exon:12922;Parent=Msa0606360-mRNA-1
chr4_2 exon 52605067 52605191 52605067 ID=Msa0606360-mRNA-1:exon:12923;Parent=Msa0606360-mRNA-1
chr4_2 exon 52605284 52605614 52605284 ID=Msa0606360-mRNA-1:exon:12924;Parent=Msa0606360-mRNA-1
chr4_2 exon 52605718 52605819 52605718 ID=Msa0606360-mRNA-1:exon:12925;Parent=Msa0606360-mRNA-1
chr4_2 exon 52605942 52606068 52605942 ID=Msa0606360-mRNA-1:exon:12926;Parent=Msa0606360-mRNA-1
chr4_2 exon 52606189 52606760 52606189 ID=Msa0606360-mRNA-1:exon:12927;Parent=Msa0606360-mRNA-1
chr4_2 exon 52607206 52607513 52607206 ID=Msa0606360-mRNA-1:exon:12928;Parent=Msa0606360-mRNA-1
chr4_2 exon 52607622 52608363 52607622 ID=Msa0606360-mRNA-1:exon:12929;Parent=Msa0606360-mRNA-1
chr4_2 five_prime_UTR 52601933 52602322 52601933 ID=Msa0606360-mRNA-1:five_prime_utr;Parent=Msa0606360-mRNA-1
chr4_2 five_prime_UTR 52602938 52603012 52602938 ID=Msa0606360-mRNA-1:five_prime_utr;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52603013 52603232 52603013 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52603773 52603862 52603773 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52603948 52604048 52603948 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52604178 52604291 52604178 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52604393 52604474 52604393 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52604740 52604807 52604740 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52604890 52604955 52604890 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52605067 52605191 52605067 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52605284 52605614 52605284 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52605718 52605819 52605718 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52605942 52606068 52605942 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52606189 52606760 52606189 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52607206 52607513 52607206 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 CDS 52607622 52607937 52607622 ID=Msa0606360-mRNA-1:cds;Parent=Msa0606360-mRNA-1
chr4_2 three_prime_UTR 52607938 52608363 52607938 ID=Msa0606360-mRNA-1:three_prime_utr;Parent=Msa0606360-mRNA-1
Gene Sequence

>Msa0606360

ATGGGAGCTATTGCTGGAGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTTAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAATGAGAAGGAAATTTCTGCTAATGAATCTGCAGATTGGGAATGTATTAATGATACTACGATTTTGTACCGGAATACATTGCGTGAAGGTTCTACGTTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGTGACTGTGAAACGAAGCAGGTATATGAGGAAGGAGCTAGGGAAATCGCTCTTTCAGTAGTCGGTGGAATTAACTCGAGTATTTTTGCATATGGGCAAACAAGCAGTGGAAAGACATATACTATGGTCGGAATAACTGAATTTGCTGTAGCAGATATTTTTGACTACGCAAAAAGGCATGAAGAAAGAGCATTTGCATTGAAGTTCTCAGCAATTGAGATTTACAATGAAATTGTTAGAGATCTTCTCAGCACTGACAACACTCCACTTAGGTTGCGTGATGATCCTGAGAGAGGACCCGTTCTAGAGAAACTTACAGAGGAGACTCTACAGGATTGGGGGCATTTTCAAGAGCTCCTATCCTTTTGTGAAGCTCAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAAGATCTCACCAAATTATCAGATTGACCATTGAAAGTTCTGCCAGGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTAAATTTTGTTGATTTGGCAGGGAGCGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGATTGAAAGAAGGTTGCCATATAAACCGGAGTTTACTTACTCTTTCGACCGTCATTCGTAAGCTGAGTAAGGGAAGACATGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTGCTTAGGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGGAGTCATGTTGAACAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAACACTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAGGAAATTAAGGAGCTAACTAAGCAACGTGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCGCATGGTGGGGAAGGATCAGATATCTAAAAAGGAAGAAGATTTATGGGAAGATGACTGTTCAGTATCAGAGTCCTCAAGCATTTGTGGTCCCAACATATGCATTAGAGAGTTCAACAATCCTCAATATAATAGTGGAGACAGTGGAAGTATTCAAGATGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAAGAGTCAAGTAGAGACAACTCAGAATTACTTGATCCGTCCTTAAGTGACAACGGGGATTTGGCTTTGACAGTATCTGGAGGGGAAAATGGAACAAGCCAGGAAATGTCTACACATTTGAATGAAGACAGCCATGATGAACAATCTCTACATGCCATGTCAGGAAACATGTCAAATTATAGAAATCACAAATTAACTAGAAGCCGGAGTTGTTCGGAGCATCACATGACTGCTTCCCCTGAGACAGGAGAAATGGAGAGGACGCCATTCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCAGATGGTTTATGGAGAAAGTTCAATCCATTAAATTTAGATGGTTCAACAAGATTTTCAAGGAACGATTCTCAGTCTTCTATTGGAAGTCCGTCAGTGGATGACCTTAGAGGCAACAGCTTGAGATCATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAAGCAGCTTGTTGATGGTCAGGGTCAGGAGACAGATAGAAAACTGAGGAATGTGAAAGATGTAGGTGTTGATCCAATGCAGGAGGCACCAGGAACTCCTTTAGACTGGTCTCTGCAGTTCAAGAGGCAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCATTAACCCACAGGACCTACTTCTTTCTTTTGTTTAGGGGTGAACAAACAGATTCCATTTACATGGAGGTAGAGCTTAGAAGACTATGCTTCCTGAAAGAAACATTTTTTGATGAAAACCAGTCTGAGAAAGACAGCCAGACAATCACGTTAACTTCAAGTGTGAGAGCTCTTCGGCGGGAGAAAGAAATGCTTATGAAGCTTATGCGGAAGAGGCTTTCTGAGGAAGAGAGGAAAAGGCTATTTAACGAATGGGGCATTGGATTGAATTCAAAGCGCAGGAGAATGCAGCTAGCAGACCGTTTATGGTGCAACACTGATATGAACCACGTAATGCAGAGTGCTGCAATAGTTGCGAGGCTAGTGAGGTTTTCAGAGCAGGGACGAGCCCTCAAGGAGATGTTTGGACTTAGCTTCACACCTCAGCTAACACGGCGAAGCCATTCATGGAAAAGTTCAAGAGCATCTCTTCCTTAG
Protein sequence

>Msa0606360

MGAIAGEELSKWEKMNGVSGCEEKILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCETKQVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEFAVADIFDYAKRHEERAFALKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPVLEKLTEETLQDWGHFQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNTDYVALLRKKDQQIEKMDKEIKELTKQRDLAESRIEDLLRMVGKDQISKKEEDLWEDDCSVSESSSICGPNICIREFNNPQYNSGDSGSIQDEEDLDEYCKEVRCVELEESSRDNSELLDPSLSDNGDLALTVSGGENGTSQEMSTHLNEDSHDEQSLHAMSGNMSNYRNHKLTRSRSCSEHHMTASPETGEMERTPFNGFEKGFPGRPDGLWRKFNPLNLDGSTRFSRNDSQSSIGSPSVDDLRGNSLRSSGDEDITSIHTFVAGMKEMVKLEYEKQLVDGQGQETDRKLRNVKDVGVDPMQEAPGTPLDWSLQFKRQQKEIIELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLCFLKETFFDENQSEKDSQTITLTSSVRALRREKEMLMKLMRKRLSEEERKRLFNEWGIGLNSKRRRMQLADRLWCNTDMNHVMQSAAIVARLVRFSEQGRALKEMFGLSFTPQLTRRSHSWKSSRASLP*