Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260820 | XP_039686677.1 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 8.11e-81 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260820 | sp|M1C146|ATG8C_SOLTU | 95.726 | 117 | 5 | 0 | 1 | 117 | 1 | 117 | 5.14e-79 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260820 | B7FH53 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 3.87e-81 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0260820 | 0.845565 | 3.750863e-59 | -8.615850e-47 |
| Msa0008290 | Msa0260820 | -0.816854 | 4.460793e-52 | -8.615850e-47 |
| Msa0024680 | Msa0260820 | -0.805286 | 1.436152e-49 | -8.615850e-47 |
| Msa0027540 | Msa0260820 | -0.808066 | 3.716783e-50 | -8.615850e-47 |
| Msa0028060 | Msa0260820 | -0.821388 | 4.147175e-53 | -8.615850e-47 |
| Msa0029540 | Msa0260820 | 0.891818 | 2.807012e-74 | -8.615850e-47 |
| Msa0030590 | Msa0260820 | -0.814578 | 1.434751e-51 | -8.615850e-47 |
| Msa0047990 | Msa0260820 | 0.875262 | 3.539045e-68 | -8.615850e-47 |
| Msa0048000 | Msa0260820 | -0.806146 | 9.479327e-50 | -8.615850e-47 |
| Msa0051230 | Msa0260820 | 0.845999 | 2.860922e-59 | -8.615850e-47 |
| Msa0051430 | Msa0260820 | 0.852699 | 3.889327e-61 | -8.615850e-47 |
| Msa0057300 | Msa0260820 | -0.815210 | 1.039136e-51 | -8.615850e-47 |
| Msa0062220 | Msa0260820 | -0.824279 | 8.795748e-54 | -8.615850e-47 |
| Msa0075310 | Msa0260820 | -0.812476 | 4.159900e-51 | -8.615850e-47 |
| Msa0090280 | Msa0260820 | 0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa0101810 | Msa0260820 | 0.856756 | 2.594776e-62 | -8.615850e-47 |
| Msa0102750 | Msa0260820 | -0.842592 | 2.353918e-58 | -8.615850e-47 |
| Msa0105420 | Msa0260820 | -0.865621 | 5.169340e-65 | -8.615850e-47 |
| Msa0120040 | Msa0260820 | 0.808597 | 2.864883e-50 | -8.615850e-47 |
| Msa0120330 | Msa0260820 | -0.840850 | 6.783237e-58 | -8.615850e-47 |
| Msa0128370 | Msa0260820 | -0.818203 | 2.215462e-52 | -8.615850e-47 |
| Msa0138970 | Msa0260820 | 0.872819 | 2.372574e-67 | -8.615850e-47 |
| Msa0142470 | Msa0260820 | -0.831638 | 1.490563e-55 | -8.615850e-47 |
| Msa0156420 | Msa0260820 | -0.809061 | 2.278811e-50 | -8.615850e-47 |
| Msa0156650 | Msa0260820 | 0.803955 | 2.722253e-49 | -8.615850e-47 |
| Msa0168100 | Msa0260820 | -0.819590 | 1.072080e-52 | -8.615850e-47 |
| Msa0172350 | Msa0260820 | -0.834084 | 3.676662e-56 | -8.615850e-47 |
| Msa0174560 | Msa0260820 | -0.802913 | 4.475704e-49 | -8.615850e-47 |
| Msa0189950 | Msa0260820 | -0.824663 | 7.145583e-54 | -8.615850e-47 |
| Msa0191250 | Msa0260820 | -0.822186 | 2.710760e-53 | -8.615850e-47 |
| Msa0192040 | Msa0260820 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0193650 | Msa0260820 | -0.849265 | 3.613429e-60 | -8.615850e-47 |
| Msa0196020 | Msa0260820 | 0.800837 | 1.194939e-48 | -8.615850e-47 |
| Msa0215320 | Msa0260820 | 0.814046 | 1.880314e-51 | -8.615850e-47 |
| Msa0222920 | Msa0260820 | -0.835585 | 1.539929e-56 | -8.615850e-47 |
| Msa0226250 | Msa0260820 | -0.809535 | 1.803970e-50 | -8.615850e-47 |
| Msa0258670 | Msa0260820 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0259560 | Msa0260820 | -0.820663 | 6.088518e-53 | -8.615850e-47 |
| Msa0260810 | Msa0260820 | -0.808565 | 2.909582e-50 | -8.615850e-47 |
| Msa0260820 | Msa0264350 | -0.851404 | 9.072175e-61 | -8.615850e-47 |
| Msa0260820 | Msa0266000 | 0.853486 | 2.314779e-61 | -8.615850e-47 |
| Msa0260820 | Msa0267760 | -0.831888 | 1.293214e-55 | -8.615850e-47 |
| Msa0260820 | Msa0275400 | 0.803275 | 3.767194e-49 | -8.615850e-47 |
| Msa0260820 | Msa0282850 | -0.805395 | 1.362630e-49 | -8.615850e-47 |
| Msa0260820 | Msa0302450 | -0.818551 | 1.847583e-52 | -8.615850e-47 |
| Msa0260820 | Msa0304740 | -0.823728 | 1.184762e-53 | -8.615850e-47 |
| Msa0260820 | Msa0311860 | -0.815412 | 9.367895e-52 | -8.615850e-47 |
| Msa0260820 | Msa0312750 | 0.818411 | 1.987429e-52 | -8.615850e-47 |
| Msa0260820 | Msa0313990 | -0.857010 | 2.183542e-62 | -8.615850e-47 |
| Msa0260820 | Msa0315150 | -0.813768 | 2.165720e-51 | -8.615850e-47 |
| Msa0260820 | Msa0320950 | -0.808622 | 2.828872e-50 | -8.615850e-47 |
| Msa0260820 | Msa0331590 | -0.812516 | 4.075745e-51 | -8.615850e-47 |
| Msa0260820 | Msa0333720 | 0.821160 | 4.680870e-53 | -8.615850e-47 |
| Msa0260820 | Msa0334350 | -0.807038 | 6.143722e-50 | -8.615850e-47 |
| Msa0260820 | Msa0338110 | -0.808263 | 3.375507e-50 | -8.615850e-47 |
| Msa0260820 | Msa0343420 | -0.806069 | 9.836009e-50 | -8.615850e-47 |
| Msa0260820 | Msa0356890 | 0.835603 | 1.524189e-56 | -8.615850e-47 |
| Msa0260820 | Msa0393680 | -0.833835 | 4.243335e-56 | -8.615850e-47 |
| Msa0260820 | Msa0414170 | -0.803244 | 3.824127e-49 | -8.615850e-47 |
| Msa0260820 | Msa0423360 | 0.883274 | 5.156227e-71 | -8.615850e-47 |
| Msa0260820 | Msa0436280 | 0.809681 | 1.677956e-50 | -8.615850e-47 |
| Msa0260820 | Msa0448550 | 0.815836 | 7.537906e-52 | -8.615850e-47 |
| Msa0260820 | Msa0469910 | 0.811959 | 5.392102e-51 | -8.615850e-47 |
| Msa0260820 | Msa0482870 | -0.810668 | 1.027851e-50 | -8.615850e-47 |
| Msa0260820 | Msa0505770 | -0.819798 | 9.612160e-53 | -8.615850e-47 |
| Msa0260820 | Msa0516370 | -0.801526 | 8.636749e-49 | -8.615850e-47 |
| Msa0260820 | Msa0526710 | -0.830317 | 3.143433e-55 | -8.615850e-47 |
| Msa0260820 | Msa0529950 | -0.800332 | 1.514680e-48 | -8.615850e-47 |
| Msa0260820 | Msa0532550 | -0.849452 | 3.204520e-60 | -8.615850e-47 |
| Msa0260820 | Msa0532710 | -0.813181 | 2.914877e-51 | -8.615850e-47 |
| Msa0260820 | Msa0540870 | -0.833498 | 5.153533e-56 | -8.615850e-47 |
| Msa0260820 | Msa0548280 | 0.806880 | 6.635468e-50 | -8.615850e-47 |
| Msa0260820 | Msa0567020 | -0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa0260820 | Msa0569020 | -0.823247 | 1.534751e-53 | -8.615850e-47 |
| Msa0260820 | Msa0572420 | -0.809733 | 1.635612e-50 | -8.615850e-47 |
| Msa0260820 | Msa0574760 | 0.858608 | 7.328605e-63 | -8.615850e-47 |
| Msa0260820 | Msa0577060 | -0.805439 | 1.334177e-49 | -8.615850e-47 |
| Msa0260820 | Msa0583940 | -0.810412 | 1.167465e-50 | -8.615850e-47 |
| Msa0260820 | Msa0604360 | -0.829659 | 4.549107e-55 | -8.615850e-47 |
| Msa0260820 | Msa0621890 | -0.815681 | 8.161547e-52 | -8.615850e-47 |
| Msa0260820 | Msa0636180 | -0.802764 | 4.806004e-49 | -8.615850e-47 |
| Msa0260820 | Msa0638320 | -0.805214 | 1.486973e-49 | -8.615850e-47 |
| Msa0260820 | Msa0638340 | -0.818801 | 1.621854e-52 | -8.615850e-47 |
| Msa0260820 | Msa0647130 | -0.810815 | 9.554066e-51 | -8.615850e-47 |
| Msa0260820 | Msa0658570 | -0.813214 | 2.867034e-51 | -8.615850e-47 |
| Msa0260820 | Msa0659510 | -0.827638 | 1.400547e-54 | -8.615850e-47 |
| Msa0260820 | Msa0677270 | -0.805005 | 1.645086e-49 | -8.615850e-47 |
| Msa0260820 | Msa0677400 | -0.846628 | 1.927758e-59 | -8.615850e-47 |
| Msa0260820 | Msa0691020 | -0.813078 | 3.069840e-51 | -8.615850e-47 |
| Msa0260820 | Msa0691050 | -0.817391 | 3.378343e-52 | -8.615850e-47 |
| Msa0260820 | Msa0703490 | -0.812799 | 3.534083e-51 | -8.615850e-47 |
| Msa0260820 | Msa0716450 | -0.800404 | 1.464340e-48 | -8.615850e-47 |
| Msa0260820 | Msa0743200 | -0.828021 | 1.133268e-54 | -8.615850e-47 |
| Msa0260820 | Msa0743680 | -0.805508 | 1.290444e-49 | -8.615850e-47 |
| Msa0260820 | Msa0753340 | -0.803712 | 3.058213e-49 | -8.615850e-47 |
| Msa0260820 | Msa0754660 | -0.800996 | 1.108851e-48 | -8.615850e-47 |
| Msa0260820 | Msa0754680 | -0.810310 | 1.228163e-50 | -8.615850e-47 |
| Msa0260820 | Msa0754720 | 0.878412 | 2.867915e-69 | -8.615850e-47 |
| Msa0260820 | Msa0756630 | 0.853605 | 2.140427e-61 | -8.615850e-47 |
| Msa0260820 | Msa0787260 | -0.810655 | 1.034964e-50 | -8.615850e-47 |
| Msa0260820 | Msa0797350 | -0.805194 | 1.501608e-49 | -8.615850e-47 |
| Msa0260820 | Msa0802470 | 0.803685 | 3.098627e-49 | -8.615850e-47 |
| Msa0260820 | Msa0804680 | -0.822776 | 1.976188e-53 | -8.615850e-47 |
| Msa0260820 | Msa0806300 | -0.819982 | 8.724186e-53 | -8.615850e-47 |
| Msa0260820 | Msa0810480 | -0.810546 | 1.092277e-50 | -8.615850e-47 |
| Msa0260820 | Msa0829620 | -0.824132 | 9.527455e-54 | -8.615850e-47 |
| Msa0260820 | Msa0834880 | -0.818709 | 1.701561e-52 | -8.615850e-47 |
| Msa0260820 | Msa0863370 | -0.819645 | 1.041994e-52 | -8.615850e-47 |
| Msa0260820 | Msa0863800 | -0.821147 | 4.711925e-53 | -8.615850e-47 |
| Msa0260820 | Msa0867890 | -0.818875 | 1.560329e-52 | -8.615850e-47 |
| Msa0260820 | Msa0870530 | -0.828496 | 8.704264e-55 | -8.615850e-47 |
| Msa0260820 | Msa0881480 | -0.816186 | 6.296805e-52 | -8.615850e-47 |
| Msa0260820 | Msa0891040 | -0.835538 | 1.582916e-56 | -8.615850e-47 |
| Msa0260820 | Msa0903700 | -0.814526 | 1.473360e-51 | -8.615850e-47 |
| Msa0260820 | Msa0907700 | -0.800530 | 1.380493e-48 | -8.615850e-47 |
| Msa0260820 | Msa0908050 | -0.807628 | 4.605485e-50 | -8.615850e-47 |
| Msa0260820 | Msa0908170 | -0.800707 | 1.270425e-48 | -8.615850e-47 |
| Msa0260820 | Msa0930910 | 0.854684 | 1.044839e-61 | -8.615850e-47 |
| Msa0260820 | Msa0938290 | -0.801561 | 8.497324e-49 | -8.615850e-47 |
| Msa0260820 | Msa0946120 | -0.810183 | 1.308447e-50 | -8.615850e-47 |
| Msa0260820 | Msa0973150 | -0.839133 | 1.901336e-57 | -8.615850e-47 |
| Msa0260820 | Msa0990960 | -0.817248 | 3.638595e-52 | -8.615850e-47 |
| Msa0260820 | Msa1000300 | -0.834906 | 2.285213e-56 | -8.615850e-47 |
| Msa0260820 | Msa1008490 | -0.843350 | 1.479067e-58 | -8.615850e-47 |
| Msa0260820 | Msa1009020 | -0.819453 | 1.152335e-52 | -8.615850e-47 |
| Msa0260820 | Msa1020710 | -0.823781 | 1.151065e-53 | -8.615850e-47 |
| Msa0260820 | Msa1037000 | -0.831822 | 1.342596e-55 | -8.615850e-47 |
| Msa0260820 | Msa1037700 | 0.836711 | 7.971231e-57 | -8.615850e-47 |
| Msa0260820 | Msa1040120 | -0.866178 | 3.448223e-65 | -8.615850e-47 |
| Msa0260820 | Msa1041730 | -0.806809 | 6.867203e-50 | -8.615850e-47 |
| Msa0260820 | Msa1068200 | 0.820816 | 5.616713e-53 | -8.615850e-47 |
| Msa0260820 | Msa1069100 | -0.800694 | 1.278072e-48 | -8.615850e-47 |
| Msa0260820 | Msa1080160 | -0.834370 | 3.117237e-56 | -8.615850e-47 |
| Msa0260820 | Msa1083410 | -0.832002 | 1.211617e-55 | -8.615850e-47 |
| Msa0260820 | Msa1084260 | -0.806754 | 7.055124e-50 | -8.615850e-47 |
| Msa0260820 | Msa1098560 | -0.838989 | 2.072194e-57 | -8.615850e-47 |
| Msa0260820 | Msa1099030 | -0.813372 | 2.645950e-51 | -8.615850e-47 |
| Msa0260820 | Msa1115330 | -0.829581 | 4.751432e-55 | -8.615850e-47 |
| Msa0260820 | Msa1128160 | -0.829341 | 5.434322e-55 | -8.615850e-47 |
| Msa0260820 | Msa1130210 | 0.822487 | 2.307385e-53 | -8.615850e-47 |
| Msa0260820 | Msa1130270 | 0.844434 | 7.576872e-59 | -8.615850e-47 |
| Msa0260820 | Msa1143620 | -0.831084 | 2.039464e-55 | -8.615850e-47 |
| Msa0260820 | Msa1156340 | 0.810923 | 9.054955e-51 | -8.615850e-47 |
| Msa0260820 | Msa1165360 | -0.824866 | 6.398443e-54 | -8.615850e-47 |
| Msa0260820 | Msa1167220 | -0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa0260820 | Msa1204120 | -0.810965 | 8.868116e-51 | -8.615850e-47 |
| Msa0260820 | Msa1212380 | -0.815075 | 1.113050e-51 | -8.615850e-47 |
| Msa0260820 | Msa1214880 | -0.825429 | 4.710046e-54 | -8.615850e-47 |
| Msa0260820 | Msa1217860 | -0.821367 | 4.191822e-53 | -8.615850e-47 |
| Msa0260820 | Msa1217900 | 0.819731 | 9.954510e-53 | -8.615850e-47 |
| Msa0260820 | Msa1220230 | -0.808070 | 3.709743e-50 | -8.615850e-47 |
| Msa0260820 | Msa1221560 | -0.800803 | 1.213959e-48 | -8.615850e-47 |
| Msa0260820 | Msa1222970 | -0.808358 | 3.221451e-50 | -8.615850e-47 |
| Msa0260820 | Msa1226510 | -0.814258 | 1.688577e-51 | -8.615850e-47 |
| Msa0260820 | Msa1231240 | -0.807060 | 6.078411e-50 | -8.615850e-47 |
| Msa0260820 | Msa1240310 | -0.813067 | 3.087835e-51 | -8.615850e-47 |
| Msa0260820 | Msa1242650 | -0.806363 | 8.532803e-50 | -8.615850e-47 |
| Msa0260820 | Msa1264020 | -0.807172 | 5.755975e-50 | -8.615850e-47 |
| Msa0260820 | Msa1265960 | -0.805871 | 1.082885e-49 | -8.615850e-47 |
| Msa0260820 | Msa1269080 | -0.806035 | 1.000235e-49 | -8.615850e-47 |
| Msa0260820 | Msa1269580 | 0.808639 | 2.805180e-50 | -8.615850e-47 |
| Msa0260820 | Msa1284140 | -0.808970 | 2.383288e-50 | -8.615850e-47 |
| Msa0260820 | Msa1300860 | -0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0260820 | Msa1331920 | -0.842704 | 2.197981e-58 | -8.615850e-47 |
| Msa0260820 | Msa1337730 | -0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0260820 | Msa1360890 | 0.824589 | 7.436737e-54 | -8.615850e-47 |
| Msa0260820 | Msa1362510 | -0.819148 | 1.352275e-52 | -8.615850e-47 |
| Msa0260820 | Msa1364470 | 0.849395 | 3.323211e-60 | -8.615850e-47 |
| Msa0260820 | Msa1376890 | -0.812068 | 5.106845e-51 | -8.615850e-47 |
| Msa0260820 | Msa1377100 | 0.854767 | 9.884601e-62 | -8.615850e-47 |
| Msa0260820 | Msa1390310 | -0.826774 | 2.255242e-54 | -8.615850e-47 |
| Msa0260820 | Msa1390770 | -0.800180 | 1.626415e-48 | -8.615850e-47 |
| Msa0260820 | Msa1404540 | -0.811280 | 7.574545e-51 | -8.615850e-47 |
| Msa0260820 | Msa1414740 | -0.811204 | 7.867508e-51 | -8.615850e-47 |
| Msa0260820 | Msa1429360 | 0.807989 | 3.859398e-50 | -8.615850e-47 |
| Msa0260820 | Msa1431000 | -0.805399 | 1.359961e-49 | -8.615850e-47 |
| Msa0260820 | Msa1431060 | -0.803118 | 4.060681e-49 | -8.615850e-47 |
| Msa0260820 | Msa1439960 | -0.814612 | 1.410132e-51 | -8.615850e-47 |
| Msa0260820 | Msa1442220 | 0.801653 | 8.134374e-49 | -8.615850e-47 |
| Msa0260820 | Msa1442300 | -0.808243 | 3.408859e-50 | -8.615850e-47 |
| Msa0260820 | Msa1447090 | -0.831446 | 1.662130e-55 | -8.615850e-47 |
| Msa0260820 | Msa1459390 | -0.808770 | 2.630598e-50 | -8.615850e-47 |
| Msa0260820 | Msa1463970 | -0.826817 | 2.203414e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260820 | MtrunA17_Chr2g0322571 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 7.46e-85 | 243 |
| Msa0260820 | MtrunA17_Chr4g0024721 | 95.833 | 120 | 5 | 0 | 1 | 120 | 1 | 120 | 1.05e-82 | 237 |
| Msa0260820 | MtrunA17_Chr2g0288531 | 81.197 | 117 | 22 | 0 | 1 | 117 | 1 | 117 | 1.30e-71 | 209 |
| Msa0260820 | MtrunA17_Chr4g0056301 | 83.333 | 120 | 20 | 0 | 1 | 120 | 1 | 120 | 3.69e-71 | 208 |
| Msa0260820 | MtrunA17_Chr4g0019141 | 63.478 | 115 | 40 | 1 | 1 | 113 | 1 | 115 | 6.39e-49 | 152 |
| Msa0260820 | MtrunA17_Chr4g0069171 | 57.018 | 114 | 49 | 0 | 4 | 117 | 5 | 118 | 1.13e-47 | 149 |
| Msa0260820 | MtrunA17_Chr7g0260981 | 56.140 | 114 | 50 | 0 | 4 | 117 | 5 | 118 | 1.89e-47 | 148 |
| Msa0260820 | MtrunA17_Chr1g0194141 | 54.310 | 116 | 53 | 0 | 2 | 117 | 3 | 118 | 4.25e-42 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260820 | AT2G05630.1 | 91.667 | 120 | 10 | 0 | 1 | 120 | 1 | 120 | 3.69e-78 | 226 |
| Msa0260820 | AT1G62040.1 | 89.916 | 119 | 12 | 0 | 1 | 119 | 1 | 119 | 9.29e-78 | 225 |
| Msa0260820 | AT4G21980.2 | 84.874 | 119 | 18 | 0 | 1 | 119 | 16 | 134 | 2.54e-72 | 212 |
| Msa0260820 | AT4G21980.1 | 84.874 | 119 | 18 | 0 | 1 | 119 | 1 | 119 | 2.78e-72 | 211 |
| Msa0260820 | AT2G05630.2 | 91.743 | 109 | 9 | 0 | 12 | 120 | 56 | 164 | 1.09e-70 | 209 |
| Msa0260820 | AT4G16520.2 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 2.10e-70 | 206 |
| Msa0260820 | AT4G16520.1 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 2.10e-70 | 206 |
| Msa0260820 | AT4G04620.3 | 82.051 | 117 | 21 | 0 | 1 | 117 | 1 | 117 | 8.73e-69 | 202 |
| Msa0260820 | AT4G04620.2 | 82.051 | 117 | 21 | 0 | 1 | 117 | 1 | 117 | 8.73e-69 | 202 |
| Msa0260820 | AT4G04620.1 | 82.051 | 117 | 21 | 0 | 1 | 117 | 1 | 117 | 8.73e-69 | 202 |
| Msa0260820 | AT3G60640.1 | 75.833 | 120 | 29 | 0 | 1 | 120 | 1 | 120 | 5.84e-67 | 198 |
| Msa0260820 | AT2G45170.2 | 78.070 | 114 | 25 | 0 | 4 | 117 | 5 | 118 | 8.12e-65 | 192 |
| Msa0260820 | AT2G45170.1 | 78.070 | 114 | 25 | 0 | 4 | 117 | 5 | 118 | 8.12e-65 | 192 |
| Msa0260820 | AT1G62040.2 | 84.043 | 94 | 15 | 0 | 1 | 94 | 1 | 94 | 7.56e-54 | 164 |
| Msa0260820 | AT4G16520.3 | 79.348 | 92 | 19 | 0 | 26 | 117 | 26 | 117 | 2.48e-50 | 156 |
| Msa0260820 | AT3G15580.1 | 56.637 | 113 | 49 | 0 | 5 | 117 | 3 | 115 | 1.27e-44 | 141 |
| Msa0260820 | AT3G06420.1 | 53.097 | 113 | 53 | 0 | 5 | 117 | 7 | 119 | 2.14e-41 | 133 |
Find 52 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGGTCCCAAATGATTT+TGG | 0.151551 | 2_2:-58714753 | None:intergenic |
| TCTTCTCTTCTCAACTCTTT+TGG | 0.233898 | 2_2:+58712022 | Msa0260820:five_prime_UTR |
| GCTTTGCTGTGACAATTTAT+TGG | 0.241677 | 2_2:+58714600 | Msa0260820:three_prime_UTR |
| GGCTAAGAGTTCCTTCAAAT+TGG | 0.251624 | 2_2:+58712147 | Msa0260820:CDS |
| TGGCAATTGGGTAACGTATA+AGG | 0.274580 | 2_2:-58711913 | None:intergenic |
| TACAGCGGGGAGAACACTTT+TGG | 0.291853 | 2_2:+58714503 | Msa0260820:CDS |
| TTGTCTAATCCAAAATCATT+TGG | 0.336859 | 2_2:+58714744 | Msa0260820:three_prime_UTR |
| ATTGGGAAGGATTTGGCAAT+TGG | 0.362325 | 2_2:-58711926 | None:intergenic |
| CTTTGCTGTGACAATTTATT+GGG | 0.378455 | 2_2:+58714601 | Msa0260820:three_prime_UTR |
| AAACAAGATTGGGAAGGATT+TGG | 0.383012 | 2_2:-58711933 | None:intergenic |
| CAATTTGAATACAAACATAA+AGG | 0.390713 | 2_2:-58714681 | None:intergenic |
| TGTCTAATCCAAAATCATTT+GGG | 0.391909 | 2_2:+58714745 | Msa0260820:three_prime_UTR |
| AGGCTGAAGCTGCTCGCATA+AGG | 0.395777 | 2_2:+58713031 | Msa0260820:CDS |
| ATTGATTGCGGAAACAAGAT+TGG | 0.397853 | 2_2:-58711944 | None:intergenic |
| TTGGGAAGGATTTGGCAATT+GGG | 0.407738 | 2_2:-58711925 | None:intergenic |
| GGGTGTAGGTTATTGTTGAA+AGG | 0.421063 | 2_2:+58713166 | Msa0260820:intron |
| CATTGGACTTAAAATAATAA+TGG | 0.422225 | 2_2:-58714769 | None:intergenic |
| AACGTATAAGGCTAAACTTT+AGG | 0.456116 | 2_2:-58711901 | None:intergenic |
| CCCCGCTGTAAGTCATATAC+AGG | 0.458740 | 2_2:-58714490 | None:intergenic |
| AAGTAGTTGCAGATTAGATA+AGG | 0.465664 | 2_2:-58714650 | None:intergenic |
| TCCGCACCACATACACGAAC+TGG | 0.481973 | 2_2:-58714243 | None:intergenic |
| GGTGTAGGTTATTGTTGAAA+GGG | 0.488338 | 2_2:+58713167 | Msa0260820:intron |
| AAAATGAAGATGGCCTTCTC+GGG | 0.489019 | 2_2:-58714283 | None:intergenic |
| GAGGAAAACAAGGATGAAGA+TGG | 0.507080 | 2_2:+58714464 | Msa0260820:CDS |
| TATGATGTCTGCAATATATG+AGG | 0.514512 | 2_2:+58714445 | Msa0260820:CDS |
| TCCTGTATATGACTTACAGC+GGG | 0.516758 | 2_2:+58714489 | Msa0260820:CDS |
| TTGATTGCGGAAACAAGATT+GGG | 0.518727 | 2_2:-58711943 | None:intergenic |
| CAACGTACTGGAATTCTATC+GGG | 0.519536 | 2_2:-58713063 | None:intergenic |
| TGGCCTACAGTTAGATCAGC+AGG | 0.520566 | 2_2:-58714223 | None:intergenic |
| ACAACGTACTGGAATTCTAT+CGG | 0.532190 | 2_2:-58713064 | None:intergenic |
| AAATCTCTCTTGATTGATTG+CGG | 0.532864 | 2_2:-58711956 | None:intergenic |
| GGCTGAAGCTGCTCGCATAA+GGG | 0.538594 | 2_2:+58713032 | Msa0260820:CDS |
| CAGCATAATCATCATCATCA+TGG | 0.541919 | 2_2:+58712126 | Msa0260820:intron |
| TTATGATTCAGAGAGGAGAC+AGG | 0.542769 | 2_2:+58713011 | Msa0260820:intron |
| GTTCCTGCTGATCTAACTGT+AGG | 0.544817 | 2_2:+58714220 | Msa0260820:CDS |
| TAGAAGAGAAGAAAAGCAAA+GGG | 0.546434 | 2_2:-58711983 | None:intergenic |
| TCATATATATTACCAGTTGG+TGG | 0.578563 | 2_2:-58714322 | None:intergenic |
| TGTAGGCCAGTTCGTGTATG+TGG | 0.582982 | 2_2:+58714237 | Msa0260820:CDS |
| CTAGAAGAGAAGAAAAGCAA+AGG | 0.584884 | 2_2:-58711984 | None:intergenic |
| TTGCGGAAACAAGATTGGGA+AGG | 0.606700 | 2_2:-58711939 | None:intergenic |
| GCCAGTTCGTGTATGTGGTG+CGG | 0.607938 | 2_2:+58714242 | Msa0260820:CDS |
| AATCAAATTGAGTCCCGAGA+AGG | 0.616573 | 2_2:+58714270 | Msa0260820:CDS |
| AGATTAGATAAGGATTGTCA+TGG | 0.617712 | 2_2:-58714640 | None:intergenic |
| TGCAATATATGAGGAAAACA+AGG | 0.622289 | 2_2:+58714454 | Msa0260820:CDS |
| AAAGCATAACTATTTCACAT+AGG | 0.623046 | 2_2:-58714582 | None:intergenic |
| TAATGTGAAATATTCACAAG+GGG | 0.646228 | 2_2:+58714531 | Msa0260820:exon |
| TTCCTGTATATGACTTACAG+CGG | 0.658464 | 2_2:+58714488 | Msa0260820:CDS |
| GTTAATGTGAAATATTCACA+AGG | 0.676537 | 2_2:+58714529 | Msa0260820:exon |
| ATTCAAATTGCAAATAGACG+AGG | 0.677060 | 2_2:+58714694 | Msa0260820:three_prime_UTR |
| TTAATGTGAAATATTCACAA+GGG | 0.685269 | 2_2:+58714530 | Msa0260820:exon |
| GAGAAAAGAACGAACCAAGG+GGG | 0.734252 | 2_2:-58712174 | None:intergenic |
| CCTGTATATGACTTACAGCG+GGG | 0.753998 | 2_2:+58714490 | Msa0260820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACCTAAAAAAACAAATAT+TGG | - | chr2_2:58712214-58712233 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTTAGGTTATAT+TGG | + | chr2_2:58712217-58712236 | Msa0260820:intron | 15.0% |
| !!! | AATTTATCGATTTTATGTTT+TGG | + | chr2_2:58712247-58712266 | Msa0260820:intron | 15.0% |
| !!! | TGATTTGTAATTTGAAAAAT+TGG | + | chr2_2:58712332-58712351 | Msa0260820:intron | 15.0% |
| !! | GATTTGTAATTTGAAAAATT+GGG | + | chr2_2:58712333-58712352 | Msa0260820:intron | 15.0% |
| !! | TTCATTAAAGTTGAAAATTT+GGG | + | chr2_2:58712388-58712407 | Msa0260820:intron | 15.0% |
| !!! | AAATATTTACACTTTTACTT+GGG | + | chr2_2:58713387-58713406 | Msa0260820:intron | 15.0% |
| !!! | TTGCCAATATTTGTTTTTTT+AGG | + | chr2_2:58712208-58712227 | Msa0260820:intron | 20.0% |
| !!! | GATTTTATGTTTTGGTTATT+AGG | + | chr2_2:58712255-58712274 | Msa0260820:intron | 20.0% |
| !! | GTTCATTAAAGTTGAAAATT+TGG | + | chr2_2:58712387-58712406 | Msa0260820:intron | 20.0% |
| !! | ACGTATCAAAATTACAAAAA+CGG | - | chr2_2:58712642-58712661 | None:intergenic | 20.0% |
| !!! | TCAGTTCTTTTATATTAATC+TGG | + | chr2_2:58713133-58713152 | Msa0260820:intron | 20.0% |
| !!! | TATTAATCTGGTTAATCTTT+TGG | + | chr2_2:58713145-58713164 | Msa0260820:intron | 20.0% |
| !!! | ATTAATCTGGTTAATCTTTT+GGG | + | chr2_2:58713146-58713165 | Msa0260820:intron | 20.0% |
| !!! | CAAATATTTACACTTTTACT+TGG | + | chr2_2:58713386-58713405 | Msa0260820:intron | 20.0% |
| !!! | TGATTTTTCATATATGTTTG+TGG | + | chr2_2:58713482-58713501 | Msa0260820:intron | 20.0% |
| !! | AGTTAATTGGTGAATAAAAA+AGG | + | chr2_2:58713689-58713708 | Msa0260820:intron | 20.0% |
| !! | GTTAATTGGTGAATAAAAAA+GGG | + | chr2_2:58713690-58713709 | Msa0260820:intron | 20.0% |
| !! | TGTAGATCAAATATATTTGT+GGG | - | chr2_2:58713778-58713797 | None:intergenic | 20.0% |
| !! | TTGTAGATCAAATATATTTG+TGG | - | chr2_2:58713779-58713798 | None:intergenic | 20.0% |
| !! | TAATCATATATATTACCAGT+TGG | - | chr2_2:58714328-58714347 | None:intergenic | 20.0% |
| !! | ATTATTATTGTAGTTGTTGA+TGG | + | chr2_2:58714344-58714363 | Msa0260820:intron | 20.0% |
| !! | TTAATGTGAAATATTCACAA+GGG | + | chr2_2:58714530-58714549 | Msa0260820:exon | 20.0% |
| !! | CAATTTGAATACAAACATAA+AGG | - | chr2_2:58714684-58714703 | None:intergenic | 20.0% |
| ! | AATTAGAGAATGAAAGAGAT+TGG | - | chr2_2:58712051-58712070 | None:intergenic | 25.0% |
| ! | AATTCACATAACGATCATAA+TGG | - | chr2_2:58712365-58712384 | None:intergenic | 25.0% |
| ! | AACAACAAAAGAAGAAGAAA+TGG | + | chr2_2:58712459-58712478 | Msa0260820:intron | 25.0% |
| !! | AGAAGAAGAAATGGTTATTT+TGG | + | chr2_2:58712468-58712487 | Msa0260820:intron | 25.0% |
| ! | TTGTAATCCATATACAATCA+AGG | - | chr2_2:58712519-58712538 | None:intergenic | 25.0% |
| ! | AGAATAAAAAAGACACCTTT+AGG | + | chr2_2:58712603-58712622 | Msa0260820:intron | 25.0% |
| ! | TACAAAAACGGTTACAAAAA+CGG | - | chr2_2:58712630-58712649 | None:intergenic | 25.0% |
| !! | AGATGAAGTTTTGCAAAATT+TGG | + | chr2_2:58712725-58712744 | Msa0260820:intron | 25.0% |
| !!! | ATTGTTGTGCTGTTTTTTTT+TGG | + | chr2_2:58712753-58712772 | Msa0260820:intron | 25.0% |
| ! | TAGTTGTGAACAATGAATTA+AGG | + | chr2_2:58712789-58712808 | Msa0260820:intron | 25.0% |
| !!! | AGTTTGTTGTTTTAGAACAT+TGG | + | chr2_2:58712901-58712920 | Msa0260820:intron | 25.0% |
| ! | AGTTTGTAACTTAGTAGTAA+TGG | - | chr2_2:58712964-58712983 | None:intergenic | 25.0% |
| ! | ATAAACTTTATGATTCAGAG+AGG | + | chr2_2:58713004-58713023 | Msa0260820:intron | 25.0% |
| !!! | AACTTTTTCTTATCGATATC+TGG | - | chr2_2:58713210-58713229 | None:intergenic | 25.0% |
| !! | TCTTATTTCATTTGGTTGAA+TGG | + | chr2_2:58713544-58713563 | Msa0260820:intron | 25.0% |
| ! | TATTTGATCTACAACAAAAG+AGG | + | chr2_2:58713785-58713804 | Msa0260820:intron | 25.0% |
| ! | AAATCTGTGTTTCACAAATA+TGG | + | chr2_2:58713853-58713872 | Msa0260820:intron | 25.0% |
| ! | GAAGTTCAAAACATAACAAA+GGG | - | chr2_2:58713900-58713919 | None:intergenic | 25.0% |
| ! | TGAAGTTCAAAACATAACAA+AGG | - | chr2_2:58713901-58713920 | None:intergenic | 25.0% |
| !!! | TATCGTTTTTTGTTGATTGT+AGG | + | chr2_2:58714191-58714210 | Msa0260820:intron | 25.0% |
| ! | GTTAATGTGAAATATTCACA+AGG | + | chr2_2:58714529-58714548 | Msa0260820:exon | 25.0% |
| ! | TAATGTGAAATATTCACAAG+GGG | + | chr2_2:58714531-58714550 | Msa0260820:exon | 25.0% |
| ! | AAAGCATAACTATTTCACAT+AGG | - | chr2_2:58714585-58714604 | None:intergenic | 25.0% |
| ! | TTGTCTAATCCAAAATCATT+TGG | + | chr2_2:58714744-58714763 | Msa0260820:three_prime_UTR | 25.0% |
| ! | TGTCTAATCCAAAATCATTT+GGG | + | chr2_2:58714745-58714764 | Msa0260820:three_prime_UTR | 25.0% |
| AACGTATAAGGCTAAACTTT+AGG | - | chr2_2:58711904-58711923 | None:intergenic | 30.0% | |
| AAATCTCTCTTGATTGATTG+CGG | - | chr2_2:58711959-58711978 | None:intergenic | 30.0% | |
| TAGAAGAGAAGAAAAGCAAA+GGG | - | chr2_2:58711986-58712005 | None:intergenic | 30.0% | |
| !! | TTTGCTTTTCTTCTCTTCTA+GGG | + | chr2_2:58711986-58712005 | Msa0260820:five_prime_UTR | 30.0% |
| ATTATGCTGCAACAGAATTA+GGG | - | chr2_2:58712115-58712134 | None:intergenic | 30.0% | |
| ! | GGATTTGAAATTCATGTGAT+CGG | + | chr2_2:58712276-58712295 | Msa0260820:intron | 30.0% |
| !! | ATTTTTGTTTGCCCAAGAAA+AGG | + | chr2_2:58712436-58712455 | Msa0260820:intron | 30.0% |
| !!! | CTTTTGTTGTTCCTTTTCTT+GGG | - | chr2_2:58712450-58712469 | None:intergenic | 30.0% |
| !!! | TCTTTTGTTGTTCCTTTTCT+TGG | - | chr2_2:58712451-58712470 | None:intergenic | 30.0% |
| GGACTAAACTAAATAACGTA+AGG | + | chr2_2:58712564-58712583 | Msa0260820:intron | 30.0% | |
| TTAATAAACGAACAACGTAC+TGG | - | chr2_2:58713078-58713097 | None:intergenic | 30.0% | |
| !! | CATTTCTATTTGTTGTGAAG+AGG | + | chr2_2:58713233-58713252 | Msa0260820:intron | 30.0% |
| !! | CTTTCTGCATTAATTTGTTG+TGG | + | chr2_2:58713326-58713345 | Msa0260820:intron | 30.0% |
| ! | TAATGAAAGTATGACCACTA+TGG | - | chr2_2:58713424-58713443 | None:intergenic | 30.0% |
| !!! | AGAGACTTTTTCATATTCGT+TGG | - | chr2_2:58713666-58713685 | None:intergenic | 30.0% |
| AAAAGTCTCTCACAGTTAAT+TGG | + | chr2_2:58713676-58713695 | Msa0260820:intron | 30.0% | |
| !!! | CTACAACAAAAGAGGTATTT+TGG | + | chr2_2:58713793-58713812 | Msa0260820:intron | 30.0% |
| !!! | CAAAAGAGGTATTTTGGTTT+AGG | + | chr2_2:58713799-58713818 | Msa0260820:intron | 30.0% |
| !!! | TTTGTCCTCCAACAATTTTT+TGG | + | chr2_2:58713939-58713958 | Msa0260820:intron | 30.0% |
| !!! | TTGTCCTCCAACAATTTTTT+GGG | + | chr2_2:58713940-58713959 | Msa0260820:intron | 30.0% |
| CAACTAACCCAAAAAATTGT+TGG | - | chr2_2:58713950-58713969 | None:intergenic | 30.0% | |
| !! | TTACTTAGTTCTAGCAACAT+TGG | + | chr2_2:58713988-58714007 | Msa0260820:intron | 30.0% |
| AAACCACTTCTCCTTTAATT+GGG | - | chr2_2:58714058-58714077 | None:intergenic | 30.0% | |
| AAAACCACTTCTCCTTTAAT+TGG | - | chr2_2:58714059-58714078 | None:intergenic | 30.0% | |
| ATGAAAATATACCACATGCA+TGG | - | chr2_2:58714157-58714176 | None:intergenic | 30.0% | |
| !! | TTTTGTTGATTGTAGGTATC+TGG | + | chr2_2:58714198-58714217 | Msa0260820:intron | 30.0% |
| GTTCTTCACAAAAATGAAGA+TGG | - | chr2_2:58714296-58714315 | None:intergenic | 30.0% | |
| TCATATATATTACCAGTTGG+TGG | - | chr2_2:58714325-58714344 | None:intergenic | 30.0% | |
| CATTAGTATCATTTCCTTCA+TGG | + | chr2_2:58714367-58714386 | Msa0260820:intron | 30.0% | |
| TATGATGTCTGCAATATATG+AGG | + | chr2_2:58714445-58714464 | Msa0260820:CDS | 30.0% | |
| TGCAATATATGAGGAAAACA+AGG | + | chr2_2:58714454-58714473 | Msa0260820:CDS | 30.0% | |
| ! | CTTTGCTGTGACAATTTATT+GGG | + | chr2_2:58714601-58714620 | Msa0260820:three_prime_UTR | 30.0% |
| AGATTAGATAAGGATTGTCA+TGG | - | chr2_2:58714643-58714662 | None:intergenic | 30.0% | |
| AAGTAGTTGCAGATTAGATA+AGG | - | chr2_2:58714653-58714672 | None:intergenic | 30.0% | |
| ATTCAAATTGCAAATAGACG+AGG | + | chr2_2:58714694-58714713 | Msa0260820:three_prime_UTR | 30.0% | |
| ! | ATAATGGTCCCAAATGATTT+TGG | - | chr2_2:58714756-58714775 | None:intergenic | 30.0% |
| AAACAAGATTGGGAAGGATT+TGG | - | chr2_2:58711936-58711955 | None:intergenic | 35.0% | |
| TTGATTGCGGAAACAAGATT+GGG | - | chr2_2:58711946-58711965 | None:intergenic | 35.0% | |
| ATTGATTGCGGAAACAAGAT+TGG | - | chr2_2:58711947-58711966 | None:intergenic | 35.0% | |
| CTAGAAGAGAAGAAAAGCAA+AGG | - | chr2_2:58711987-58712006 | None:intergenic | 35.0% | |
| !! | CTTTGCTTTTCTTCTCTTCT+AGG | + | chr2_2:58711985-58712004 | Msa0260820:five_prime_UTR | 35.0% |
| ! | TCTTCTCTTCTCAACTCTTT+TGG | + | chr2_2:58712022-58712041 | Msa0260820:five_prime_UTR | 35.0% |
| GATTATGCTGCAACAGAATT+AGG | - | chr2_2:58712116-58712135 | None:intergenic | 35.0% | |
| CAGCATAATCATCATCATCA+TGG | + | chr2_2:58712126-58712145 | Msa0260820:intron | 35.0% | |
| AAGAGAAAAGAACGAACCAA+GGG | - | chr2_2:58712179-58712198 | None:intergenic | 35.0% | |
| TAAGAGAAAAGAACGAACCA+AGG | - | chr2_2:58712180-58712199 | None:intergenic | 35.0% | |
| TTACAGGCCTTGATTGTATA+TGG | + | chr2_2:58712509-58712528 | Msa0260820:intron | 35.0% | |
| ACTAATGAAAGACACATTCG+AGG | + | chr2_2:58712543-58712562 | Msa0260820:intron | 35.0% | |
| !!! | TAGAACATTGGTTTTCTCTC+TGG | + | chr2_2:58712913-58712932 | Msa0260820:intron | 35.0% |
| !!! | AGAACATTGGTTTTCTCTCT+GGG | + | chr2_2:58712914-58712933 | Msa0260820:intron | 35.0% |
| ACAACGTACTGGAATTCTAT+CGG | - | chr2_2:58713067-58713086 | None:intergenic | 35.0% | |
| GGTGTAGGTTATTGTTGAAA+GGG | + | chr2_2:58713167-58713186 | Msa0260820:intron | 35.0% | |
| TGCAAGGTTAGGAACAATTA+AGG | - | chr2_2:58713514-58713533 | None:intergenic | 35.0% | |
| CCAAATGAAATAAGATGCCA+AGG | - | chr2_2:58713539-58713558 | None:intergenic | 35.0% | |
| ! | CCTTGGCATCTTATTTCATT+TGG | + | chr2_2:58713536-58713555 | Msa0260820:intron | 35.0% |
| CTAACCCAAAAAATTGTTGG+AGG | - | chr2_2:58713947-58713966 | None:intergenic | 35.0% | |
| CTGTAGAAAAGTAGCAAAAG+TGG | + | chr2_2:58714097-58714116 | Msa0260820:intron | 35.0% | |
| AAAAATGAAGATGGCCTTCT+CGG | - | chr2_2:58714287-58714306 | None:intergenic | 35.0% | |
| ! | AAGAACATTTTACCACCAAC+TGG | + | chr2_2:58714310-58714329 | Msa0260820:CDS | 35.0% |
| TCACAAGTTAATCACCATGA+AGG | - | chr2_2:58714384-58714403 | None:intergenic | 35.0% | |
| TTCCTGTATATGACTTACAG+CGG | + | chr2_2:58714488-58714507 | Msa0260820:CDS | 35.0% | |
| ! | GCTTTGCTGTGACAATTTAT+TGG | + | chr2_2:58714600-58714619 | Msa0260820:three_prime_UTR | 35.0% |
| TGGCAATTGGGTAACGTATA+AGG | - | chr2_2:58711916-58711935 | None:intergenic | 40.0% | |
| TTGGGAAGGATTTGGCAATT+GGG | - | chr2_2:58711928-58711947 | None:intergenic | 40.0% | |
| ATTGGGAAGGATTTGGCAAT+TGG | - | chr2_2:58711929-58711948 | None:intergenic | 40.0% | |
| GGCTAAGAGTTCCTTCAAAT+TGG | + | chr2_2:58712147-58712166 | Msa0260820:CDS | 40.0% | |
| AGAGAAAAGAACGAACCAAG+GGG | - | chr2_2:58712178-58712197 | None:intergenic | 40.0% | |
| CCTGTAACAAACACAGGTTT+AGG | - | chr2_2:58712496-58712515 | None:intergenic | 40.0% | |
| ! | CCTAAACCTGTGTTTGTTAC+AGG | + | chr2_2:58712493-58712512 | Msa0260820:intron | 40.0% |
| CGTAAGGAACTACACATCAT+CGG | + | chr2_2:58712580-58712599 | Msa0260820:intron | 40.0% | |
| GGTTACAAAAACGGTCCTAA+AGG | - | chr2_2:58712621-58712640 | None:intergenic | 40.0% | |
| !!! | GCTTTTTCAGTTCTGCTAGT+TGG | + | chr2_2:58712847-58712866 | Msa0260820:intron | 40.0% |
| !!! | GAACATTGGTTTTCTCTCTG+GGG | + | chr2_2:58712915-58712934 | Msa0260820:intron | 40.0% |
| TTATGATTCAGAGAGGAGAC+AGG | + | chr2_2:58713011-58713030 | Msa0260820:intron | 40.0% | |
| CAACGTACTGGAATTCTATC+GGG | - | chr2_2:58713066-58713085 | None:intergenic | 40.0% | |
| CATTACATATGTACGCGCAA+AGG | - | chr2_2:58713107-58713126 | None:intergenic | 40.0% | |
| !! | CTGGTTAATCTTTTGGGTGT+AGG | + | chr2_2:58713152-58713171 | Msa0260820:intron | 40.0% |
| GGGTGTAGGTTATTGTTGAA+AGG | + | chr2_2:58713166-58713185 | Msa0260820:intron | 40.0% | |
| TGGTTCACCTTGTTGAACAT+GGG | + | chr2_2:58713346-58713365 | Msa0260820:intron | 40.0% | |
| TGAACAACCCATGTTCAACA+AGG | - | chr2_2:58713356-58713375 | None:intergenic | 40.0% | |
| ! | CATGGGTTGTTCATTGAAGT+TGG | + | chr2_2:58713363-58713382 | Msa0260820:intron | 40.0% |
| ATAAGATGCCAAGGTTTGCA+AGG | - | chr2_2:58713530-58713549 | None:intergenic | 40.0% | |
| !! | CTTAGTTCTAGCAACATTGG+AGG | + | chr2_2:58713991-58714010 | Msa0260820:intron | 40.0% |
| TGTGAGTGAGATGAAGACAA+GGG | - | chr2_2:58714029-58714048 | None:intergenic | 40.0% | |
| CACTTCTCCTTTAATTGGGA+GGG | - | chr2_2:58714054-58714073 | None:intergenic | 40.0% | |
| AAAAGTAGCAAAAGTGGCTG+TGG | + | chr2_2:58714103-58714122 | Msa0260820:intron | 40.0% | |
| AATCAAATTGAGTCCCGAGA+AGG | + | chr2_2:58714270-58714289 | Msa0260820:CDS | 40.0% | |
| AAAATGAAGATGGCCTTCTC+GGG | - | chr2_2:58714286-58714305 | None:intergenic | 40.0% | |
| TCATAGCAGCTGTATGAAGA+GGG | - | chr2_2:58714430-58714449 | None:intergenic | 40.0% | |
| ATCATAGCAGCTGTATGAAG+AGG | - | chr2_2:58714431-58714450 | None:intergenic | 40.0% | |
| GAGGAAAACAAGGATGAAGA+TGG | + | chr2_2:58714464-58714483 | Msa0260820:CDS | 40.0% | |
| TCCTGTATATGACTTACAGC+GGG | + | chr2_2:58714489-58714508 | Msa0260820:CDS | 40.0% | |
| TTGCGGAAACAAGATTGGGA+AGG | - | chr2_2:58711942-58711961 | None:intergenic | 45.0% | |
| !! | AAGGGGGTGTTCCAATTTGA+AGG | - | chr2_2:58712161-58712180 | None:intergenic | 45.0% |
| TTCAAATTGGAACACCCCCT+TGG | + | chr2_2:58712160-58712179 | Msa0260820:CDS | 45.0% | |
| GAGAAAAGAACGAACCAAGG+GGG | - | chr2_2:58712177-58712196 | None:intergenic | 45.0% | |
| TCAAGGCCTGTAACAAACAC+AGG | - | chr2_2:58712502-58712521 | None:intergenic | 45.0% | |
| ! | CATTTTCATCCTCCAACGTG+AGG | - | chr2_2:58712686-58712705 | None:intergenic | 45.0% |
| GTGGTTCACCTTGTTGAACA+TGG | + | chr2_2:58713345-58713364 | Msa0260820:intron | 45.0% | |
| GTTCCTAACCTTGCAAACCT+TGG | + | chr2_2:58713519-58713538 | Msa0260820:intron | 45.0% | |
| ATGCCAAGGTTTGCAAGGTT+AGG | - | chr2_2:58713525-58713544 | None:intergenic | 45.0% | |
| GTTCTAGCAACATTGGAGGT+TGG | + | chr2_2:58713995-58714014 | Msa0260820:intron | 45.0% | |
| GTGTGAGTGAGATGAAGACA+AGG | - | chr2_2:58714030-58714049 | None:intergenic | 45.0% | |
| TCACACACCCTCCCAATTAA+AGG | + | chr2_2:58714044-58714063 | Msa0260820:intron | 45.0% | |
| CCACTTCTCCTTTAATTGGG+AGG | - | chr2_2:58714055-58714074 | None:intergenic | 45.0% | |
| CCTCCCAATTAAAGGAGAAG+TGG | + | chr2_2:58714052-58714071 | Msa0260820:intron | 45.0% | |
| GTTCCTGCTGATCTAACTGT+AGG | + | chr2_2:58714220-58714239 | Msa0260820:CDS | 45.0% | |
| CCTGTATATGACTTACAGCG+GGG | + | chr2_2:58714490-58714509 | Msa0260820:CDS | 45.0% | |
| GATATCGCAGTCCATGCATG+TGG | + | chr2_2:58714143-58714162 | Msa0260820:intron | 50.0% | |
| TGGCCTACAGTTAGATCAGC+AGG | - | chr2_2:58714226-58714245 | None:intergenic | 50.0% | |
| TGTAGGCCAGTTCGTGTATG+TGG | + | chr2_2:58714237-58714256 | Msa0260820:CDS | 50.0% | |
| CCCCGCTGTAAGTCATATAC+AGG | - | chr2_2:58714493-58714512 | None:intergenic | 50.0% | |
| ! | TACAGCGGGGAGAACACTTT+TGG | + | chr2_2:58714503-58714522 | Msa0260820:CDS | 50.0% |
| ! | ACAGCGGGGAGAACACTTTT+GGG | + | chr2_2:58714504-58714523 | Msa0260820:CDS | 50.0% |
| ATTGTGACAGCGCCTCACGT+TGG | + | chr2_2:58712671-58712690 | Msa0260820:intron | 55.0% | |
| AGGCTGAAGCTGCTCGCATA+AGG | + | chr2_2:58713031-58713050 | Msa0260820:CDS | 55.0% | |
| GGCTGAAGCTGCTCGCATAA+GGG | + | chr2_2:58713032-58713051 | Msa0260820:CDS | 55.0% | |
| GGGCTAGACTAGAGCCATAG+TGG | + | chr2_2:58713407-58713426 | Msa0260820:intron | 55.0% | |
| GCCAGTTCGTGTATGTGGTG+CGG | + | chr2_2:58714242-58714261 | Msa0260820:CDS | 55.0% | |
| TCCGCACCACATACACGAAC+TGG | - | chr2_2:58714246-58714265 | None:intergenic | 55.0% | |
| GTGACAGCGCCTCACGTTGG+AGG | + | chr2_2:58712674-58712693 | Msa0260820:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 58711886 | 58714783 | 58711886 | ID=Msa0260820;Name=Msa0260820 |
| chr2_2 | mRNA | 58711886 | 58714783 | 58711886 | ID=Msa0260820-mRNA-1;Parent=Msa0260820;Name=Msa0260820-mRNA-1;_AED=0.12;_eAED=0.12;_QI=174|1|1|1|0.8|0.66|6|245|120 |
| chr2_2 | exon | 58711886 | 58712043 | 58711886 | ID=Msa0260820-mRNA-1:exon:18071;Parent=Msa0260820-mRNA-1 |
| chr2_2 | exon | 58712129 | 58712181 | 58712129 | ID=Msa0260820-mRNA-1:exon:18072;Parent=Msa0260820-mRNA-1 |
| chr2_2 | exon | 58713022 | 58713077 | 58713022 | ID=Msa0260820-mRNA-1:exon:18073;Parent=Msa0260820-mRNA-1 |
| chr2_2 | exon | 58713174 | 58713226 | 58713174 | ID=Msa0260820-mRNA-1:exon:18074;Parent=Msa0260820-mRNA-1 |
| chr2_2 | exon | 58714213 | 58714331 | 58714213 | ID=Msa0260820-mRNA-1:exon:18075;Parent=Msa0260820-mRNA-1 |
| chr2_2 | exon | 58714441 | 58714783 | 58714441 | ID=Msa0260820-mRNA-1:exon:18076;Parent=Msa0260820-mRNA-1 |
| chr2_2 | five_prime_UTR | 58711886 | 58712043 | 58711886 | ID=Msa0260820-mRNA-1:five_prime_utr;Parent=Msa0260820-mRNA-1 |
| chr2_2 | five_prime_UTR | 58712129 | 58712144 | 58712129 | ID=Msa0260820-mRNA-1:five_prime_utr;Parent=Msa0260820-mRNA-1 |
| chr2_2 | CDS | 58712145 | 58712181 | 58712145 | ID=Msa0260820-mRNA-1:cds;Parent=Msa0260820-mRNA-1 |
| chr2_2 | CDS | 58713022 | 58713077 | 58713022 | ID=Msa0260820-mRNA-1:cds;Parent=Msa0260820-mRNA-1 |
| chr2_2 | CDS | 58713174 | 58713226 | 58713174 | ID=Msa0260820-mRNA-1:cds;Parent=Msa0260820-mRNA-1 |
| chr2_2 | CDS | 58714213 | 58714331 | 58714213 | ID=Msa0260820-mRNA-1:cds;Parent=Msa0260820-mRNA-1 |
| chr2_2 | CDS | 58714441 | 58714538 | 58714441 | ID=Msa0260820-mRNA-1:cds;Parent=Msa0260820-mRNA-1 |
| chr2_2 | three_prime_UTR | 58714539 | 58714783 | 58714539 | ID=Msa0260820-mRNA-1:three_prime_utr;Parent=Msa0260820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
