AlfalfaGEDB | Msa0299890

M. sativa cultivar zhongmu-4 / Msa0299890

KEGG: K19355
GO: GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0004567 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010412 GO:0015923 GO:0016052 GO:0016787 GO:0016798 GO:0016985 GO:0016998 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0046355 GO:0071554 GO:0071704 GO:1901575
PFAM: PF00150.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0299890	XP_013465104.1	90.930	430	6	1	1	397	1	430	0.0	802

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0299890	sp\|Q7Y223\|MAN2_ARATH	63.133	415	118	2	3	384	5	417	0.0	540

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0299890	A0A072VAS9	90.930	430	6	1	1	397	1	430	0.0	802

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0007080	Msa0299890	0.800783	1.225789e-48	-8.615850e-47
Msa0008340	Msa0299890	0.820652	6.125305e-53	-8.615850e-47
Msa0009760	Msa0299890	0.817251	3.633271e-52	-8.615850e-47
Msa0016670	Msa0299890	0.805210	1.490256e-49	-8.615850e-47
Msa0017510	Msa0299890	0.812397	4.328137e-51	-8.615850e-47
Msa0032320	Msa0299890	0.830568	2.728699e-55	-8.615850e-47
Msa0032370	Msa0299890	0.849549	3.012049e-60	-8.615850e-47
Msa0032840	Msa0299890	-0.808614	2.840459e-50	-8.615850e-47
Msa0034270	Msa0299890	0.804435	2.162757e-49	-8.615850e-47
Msa0044020	Msa0299890	0.810341	1.209333e-50	-8.615850e-47
Msa0046100	Msa0299890	0.810369	1.192880e-50	-8.615850e-47
Msa0048000	Msa0299890	0.820712	5.934583e-53	-8.615850e-47
Msa0050730	Msa0299890	0.818868	1.565511e-52	-8.615850e-47
Msa0050760	Msa0299890	0.829746	4.332987e-55	-8.615850e-47
Msa0069330	Msa0299890	0.822536	2.247619e-53	-8.615850e-47
Msa0072810	Msa0299890	0.803048	4.198156e-49	-8.615850e-47
Msa0073670	Msa0299890	0.807543	4.802201e-50	-8.615850e-47
Msa0078650	Msa0299890	0.800070	1.712195e-48	-8.615850e-47
Msa0081360	Msa0299890	0.808282	3.344364e-50	-8.615850e-47
Msa0081480	Msa0299890	0.802226	6.202353e-49	-8.615850e-47
Msa0089380	Msa0299890	0.807395	5.160972e-50	-8.615850e-47
Msa0094850	Msa0299890	0.807646	4.566046e-50	-8.615850e-47
Msa0103000	Msa0299890	0.820548	6.471307e-53	-8.615850e-47
Msa0104550	Msa0299890	0.811173	7.992077e-51	-8.615850e-47
Msa0105420	Msa0299890	0.819477	1.137758e-52	-8.615850e-47
Msa0110970	Msa0299890	0.843479	1.366603e-58	-8.615850e-47
Msa0113160	Msa0299890	0.801424	9.064054e-49	-8.615850e-47
Msa0114540	Msa0299890	-0.847487	1.120845e-59	-8.615850e-47
Msa0124340	Msa0299890	0.851443	8.847735e-61	-8.615850e-47
Msa0130240	Msa0299890	0.804301	2.307174e-49	-8.615850e-47
Msa0143380	Msa0299890	0.803851	2.861584e-49	-8.615850e-47
Msa0146260	Msa0299890	0.812178	4.830905e-51	-8.615850e-47
Msa0148100	Msa0299890	0.806116	9.615544e-50	-8.615850e-47
Msa0150570	Msa0299890	0.811741	6.015073e-51	-8.615850e-47
Msa0157290	Msa0299890	0.812217	4.738260e-51	-8.615850e-47
Msa0172350	Msa0299890	0.827540	1.478591e-54	-8.615850e-47
Msa0191250	Msa0299890	0.816105	6.564104e-52	-8.615850e-47
Msa0193890	Msa0299890	0.805945	1.044616e-49	-8.615850e-47
Msa0217400	Msa0299890	0.803195	3.913663e-49	-8.615850e-47
Msa0220740	Msa0299890	0.800189	1.619476e-48	-8.615850e-47
Msa0222920	Msa0299890	0.812620	3.869022e-51	-8.615850e-47
Msa0225180	Msa0299890	0.805280	1.440723e-49	-8.615850e-47
Msa0227510	Msa0299890	0.812318	4.503988e-51	-8.615850e-47
Msa0230550	Msa0299890	-0.803404	3.542327e-49	-8.615850e-47
Msa0238890	Msa0299890	0.810302	1.233391e-50	-8.615850e-47
Msa0241800	Msa0299890	0.823111	1.651428e-53	-8.615850e-47
Msa0242680	Msa0299890	0.811541	6.648309e-51	-8.615850e-47
Msa0245850	Msa0299890	0.813017	3.167333e-51	-8.615850e-47
Msa0260810	Msa0299890	0.829547	4.841766e-55	-8.615850e-47
Msa0264350	Msa0299890	0.804674	1.928836e-49	-8.615850e-47
Msa0267760	Msa0299890	0.819927	8.982303e-53	-8.615850e-47
Msa0276920	Msa0299890	0.816922	4.307426e-52	-8.615850e-47
Msa0287310	Msa0299890	0.809226	2.100720e-50	-8.615850e-47
Msa0299890	Msa0308830	0.809330	1.995524e-50	-8.615850e-47
Msa0299890	Msa0311700	0.817424	3.320967e-52	-8.615850e-47
Msa0299890	Msa0311860	0.807864	4.105008e-50	-8.615850e-47
Msa0299890	Msa0316850	0.828256	9.947588e-55	-8.615850e-47
Msa0299890	Msa0320100	0.807870	4.092373e-50	-8.615850e-47
Msa0299890	Msa0323180	0.818966	1.487756e-52	-8.615850e-47
Msa0299890	Msa0325850	0.801481	8.823128e-49	-8.615850e-47
Msa0299890	Msa0333920	0.804480	2.117081e-49	-8.615850e-47
Msa0299890	Msa0334040	0.818776	1.642898e-52	-8.615850e-47
Msa0299890	Msa0335040	0.847628	1.025616e-59	-8.615850e-47
Msa0299890	Msa0337330	0.851985	6.209848e-61	-8.615850e-47
Msa0299890	Msa0362780	0.802167	6.378788e-49	-8.615850e-47
Msa0299890	Msa0369850	0.810417	1.164801e-50	-8.615850e-47
Msa0299890	Msa0388960	0.801098	1.056769e-48	-8.615850e-47
Msa0299890	Msa0392940	0.805417	1.348259e-49	-8.615850e-47
Msa0299890	Msa0403850	0.801540	8.581121e-49	-8.615850e-47
Msa0299890	Msa0410500	0.855796	4.960727e-62	-8.615850e-47
Msa0299890	Msa0410650	0.806474	8.084729e-50	-8.615850e-47
Msa0299890	Msa0413450	0.819806	9.573066e-53	-8.615850e-47
Msa0299890	Msa0414950	-0.809097	2.239076e-50	-8.615850e-47
Msa0299890	Msa0417880	0.809993	1.437537e-50	-8.615850e-47
Msa0299890	Msa0423900	0.811825	5.767666e-51	-8.615850e-47
Msa0299890	Msa0427220	0.811771	5.925957e-51	-8.615850e-47
Msa0299890	Msa0428170	0.801490	8.786447e-49	-8.615850e-47
Msa0299890	Msa0447370	0.806039	9.980700e-50	-8.615850e-47
Msa0299890	Msa0448750	0.802253	6.123089e-49	-8.615850e-47
Msa0299890	Msa0449820	0.821282	4.386727e-53	-8.615850e-47
Msa0299890	Msa0449830	0.810462	1.139195e-50	-8.615850e-47
Msa0299890	Msa0452960	0.856691	2.711097e-62	-8.615850e-47
Msa0299890	Msa0461720	0.816182	6.308908e-52	-8.615850e-47
Msa0299890	Msa0467430	0.808908	2.458321e-50	-8.615850e-47
Msa0299890	Msa0469160	0.823594	1.273260e-53	-8.615850e-47
Msa0299890	Msa0474950	0.816533	5.264830e-52	-8.615850e-47
Msa0299890	Msa0481460	0.805689	1.182577e-49	-8.615850e-47
Msa0299890	Msa0484780	0.829383	5.307717e-55	-8.615850e-47
Msa0299890	Msa0485990	0.806892	6.595741e-50	-8.615850e-47
Msa0299890	Msa0495320	0.809243	2.083387e-50	-8.615850e-47
Msa0299890	Msa0507680	0.804251	2.362528e-49	-8.615850e-47
Msa0299890	Msa0513160	0.810793	9.657550e-51	-8.615850e-47
Msa0299890	Msa0523460	0.801422	9.072816e-49	-8.615850e-47
Msa0299890	Msa0526710	0.819732	9.949057e-53	-8.615850e-47
Msa0299890	Msa0546300	0.815177	1.056711e-51	-8.615850e-47
Msa0299890	Msa0547020	0.807291	5.431262e-50	-8.615850e-47
Msa0299890	Msa0574890	0.813634	2.318124e-51	-8.615850e-47
Msa0299890	Msa0585920	0.800375	1.484132e-48	-8.615850e-47
Msa0299890	Msa0587940	0.808032	3.780224e-50	-8.615850e-47
Msa0299890	Msa0609450	0.800430	1.446825e-48	-8.615850e-47
Msa0299890	Msa0618040	0.800182	1.624803e-48	-8.615850e-47
Msa0299890	Msa0620240	0.831035	2.096668e-55	-8.615850e-47
Msa0299890	Msa0620990	0.800222	1.595049e-48	-8.615850e-47
Msa0299890	Msa0626280	0.820091	8.238922e-53	-8.615850e-47
Msa0299890	Msa0628890	0.807728	4.386707e-50	-8.615850e-47
Msa0299890	Msa0642720	0.820918	5.320580e-53	-8.615850e-47
Msa0299890	Msa0657750	0.802778	4.773150e-49	-8.615850e-47
Msa0299890	Msa0682550	0.808392	3.168075e-50	-8.615850e-47
Msa0299890	Msa0684500	0.840231	9.846279e-58	-8.615850e-47
Msa0299890	Msa0693380	0.830881	2.287522e-55	-8.615850e-47
Msa0299890	Msa0702340	0.810282	1.245584e-50	-8.615850e-47
Msa0299890	Msa0702350	0.803947	2.732815e-49	-8.615850e-47
Msa0299890	Msa0702570	0.811655	6.281077e-51	-8.615850e-47
Msa0299890	Msa0702590	0.811955	5.403762e-51	-8.615850e-47
Msa0299890	Msa0702660	0.812890	3.375816e-51	-8.615850e-47
Msa0299890	Msa0705870	0.807736	4.369922e-50	-8.615850e-47
Msa0299890	Msa0723990	0.811343	7.342702e-51	-8.615850e-47
Msa0299890	Msa0734960	0.804058	2.592185e-49	-8.615850e-47
Msa0299890	Msa0740640	0.822821	1.929115e-53	-8.615850e-47
Msa0299890	Msa0743800	0.810199	1.298235e-50	-8.615850e-47
Msa0299890	Msa0753340	0.807199	5.678840e-50	-8.615850e-47
Msa0299890	Msa0753770	0.818765	1.652274e-52	-8.615850e-47
Msa0299890	Msa0754720	-0.811722	6.074272e-51	-8.615850e-47
Msa0299890	Msa0756530	0.812066	5.112114e-51	-8.615850e-47
Msa0299890	Msa0756630	-0.803949	2.731166e-49	-8.615850e-47
Msa0299890	Msa0760380	0.817733	2.829976e-52	-8.615850e-47
Msa0299890	Msa0793720	0.802855	4.602373e-49	-8.615850e-47
Msa0299890	Msa0814320	0.808777	2.621656e-50	-8.615850e-47
Msa0299890	Msa0818160	0.806001	1.016607e-49	-8.615850e-47
Msa0299890	Msa0824640	0.818276	2.133249e-52	-8.615850e-47
Msa0299890	Msa0824660	0.812174	4.840205e-51	-8.615850e-47
Msa0299890	Msa0828920	0.813847	2.080589e-51	-8.615850e-47
Msa0299890	Msa0829620	0.816084	6.636894e-52	-8.615850e-47
Msa0299890	Msa0840260	0.836218	1.064369e-56	-8.615850e-47
Msa0299890	Msa0844240	0.802319	5.936478e-49	-8.615850e-47
Msa0299890	Msa0863370	0.805796	1.122630e-49	-8.615850e-47
Msa0299890	Msa0864010	0.816216	6.201035e-52	-8.615850e-47
Msa0299890	Msa0866120	0.801410	9.123701e-49	-8.615850e-47
Msa0299890	Msa0867890	0.816178	6.321651e-52	-8.615850e-47
Msa0299890	Msa0878290	0.800125	1.669074e-48	-8.615850e-47
Msa0299890	Msa0880140	0.814134	1.798435e-51	-8.615850e-47
Msa0299890	Msa0880440	0.825576	4.347441e-54	-8.615850e-47
Msa0299890	Msa0882510	0.829445	5.128644e-55	-8.615850e-47
Msa0299890	Msa0893810	0.839704	1.351404e-57	-8.615850e-47
Msa0299890	Msa0896220	0.807746	4.347060e-50	-8.615850e-47
Msa0299890	Msa0908050	0.813750	2.185118e-51	-8.615850e-47
Msa0299890	Msa0908170	0.815812	7.629634e-52	-8.615850e-47
Msa0299890	Msa0930780	0.845549	3.788319e-59	-8.615850e-47
Msa0299890	Msa0931950	0.802196	6.291211e-49	-8.615850e-47
Msa0299890	Msa0940460	0.816520	5.299926e-52	-8.615850e-47
Msa0299890	Msa0959010	0.809018	2.327819e-50	-8.615850e-47
Msa0299890	Msa0966420	0.808529	2.961746e-50	-8.615850e-47
Msa0299890	Msa0986920	0.801400	9.168308e-49	-8.615850e-47
Msa0299890	Msa0993530	0.820364	7.131160e-53	-8.615850e-47
Msa0299890	Msa1004420	0.805774	1.134563e-49	-8.615850e-47
Msa0299890	Msa1012810	0.830322	3.134501e-55	-8.615850e-47
Msa0299890	Msa1019020	0.815792	7.711354e-52	-8.615850e-47
Msa0299890	Msa1031930	0.817008	4.119495e-52	-8.615850e-47
Msa0299890	Msa1037920	0.811084	8.357157e-51	-8.615850e-47
Msa0299890	Msa1054240	0.808032	3.780046e-50	-8.615850e-47
Msa0299890	Msa1063950	0.832386	9.738195e-56	-8.615850e-47
Msa0299890	Msa1082500	0.822691	2.069158e-53	-8.615850e-47
Msa0299890	Msa1082700	0.800056	1.723350e-48	-8.615850e-47
Msa0299890	Msa1085300	0.813507	2.472071e-51	-8.615850e-47
Msa0299890	Msa1087470	0.815548	8.739436e-52	-8.615850e-47
Msa0299890	Msa1087980	0.803892	2.806351e-49	-8.615850e-47
Msa0299890	Msa1104000	0.814388	1.580169e-51	-8.615850e-47
Msa0299890	Msa1111110	0.825960	3.523943e-54	-8.615850e-47
Msa0299890	Msa1124310	0.802122	6.517066e-49	-8.615850e-47
Msa0299890	Msa1127890	0.807416	5.108533e-50	-8.615850e-47
Msa0299890	Msa1133000	0.830430	2.949594e-55	-8.615850e-47
Msa0299890	Msa1147570	0.801873	7.332433e-49	-8.615850e-47
Msa0299890	Msa1151910	0.816775	4.647814e-52	-8.615850e-47
Msa0299890	Msa1152510	0.802597	5.202166e-49	-8.615850e-47
Msa0299890	Msa1170280	0.808383	3.182536e-50	-8.615850e-47
Msa0299890	Msa1179940	0.833314	5.728038e-56	-8.615850e-47
Msa0299890	Msa1179970	0.827708	1.347630e-54	-8.615850e-47
Msa0299890	Msa1182770	0.839720	1.338762e-57	-8.615850e-47
Msa0299890	Msa1185540	0.807923	3.986344e-50	-8.615850e-47
Msa0299890	Msa1188910	0.803601	3.225313e-49	-8.615850e-47
Msa0299890	Msa1211150	-0.806522	7.896274e-50	-8.615850e-47
Msa0299890	Msa1224830	0.822902	1.847512e-53	-8.615850e-47
Msa0299890	Msa1224840	0.811076	8.389049e-51	-8.615850e-47
Msa0299890	Msa1236100	0.833142	6.320173e-56	-8.615850e-47
Msa0299890	Msa1243040	0.808820	2.565954e-50	-8.615850e-47
Msa0299890	Msa1252190	0.813157	2.950704e-51	-8.615850e-47
Msa0299890	Msa1271300	0.803491	3.399342e-49	-8.615850e-47
Msa0299890	Msa1278840	0.836008	1.203352e-56	-8.615850e-47
Msa0299890	Msa1283990	0.820556	6.443556e-53	-8.615850e-47
Msa0299890	Msa1292830	0.803663	3.130927e-49	-8.615850e-47
Msa0299890	Msa1308380	0.807331	5.325380e-50	-8.615850e-47
Msa0299890	Msa1313150	0.800100	1.688404e-48	-8.615850e-47
Msa0299890	Msa1318240	0.817696	2.885011e-52	-8.615850e-47
Msa0299890	Msa1319650	0.821569	3.766442e-53	-8.615850e-47
Msa0299890	Msa1340510	0.802175	6.356032e-49	-8.615850e-47
Msa0299890	Msa1343070	0.807918	3.996757e-50	-8.615850e-47
Msa0299890	Msa1362510	0.805080	1.586505e-49	-8.615850e-47
Msa0299890	Msa1363890	0.812603	3.901044e-51	-8.615850e-47
Msa0299890	Msa1364470	-0.801910	7.205061e-49	-8.615850e-47
Msa0299890	Msa1373330	0.838039	3.642724e-57	-8.615850e-47
Msa0299890	Msa1374040	0.810700	1.011757e-50	-8.615850e-47
Msa0299890	Msa1390310	0.829182	5.940485e-55	-8.615850e-47
Msa0299890	Msa1395530	0.801845	7.429818e-49	-8.615850e-47
Msa0299890	Msa1396780	0.809919	1.491088e-50	-8.615850e-47
Msa0299890	Msa1398860	0.820549	6.467898e-53	-8.615850e-47
Msa0299890	Msa1402270	0.810140	1.336530e-50	-8.615850e-47
Msa0299890	Msa1404540	0.839480	1.545471e-57	-8.615850e-47
Msa0299890	Msa1408790	0.815427	9.295854e-52	-8.615850e-47
Msa0299890	Msa1414740	0.807475	4.965057e-50	-8.615850e-47
Msa0299890	Msa1418260	0.815109	1.093773e-51	-8.615850e-47
Msa0299890	Msa1431040	0.805735	1.156340e-49	-8.615850e-47
Msa0299890	Msa1431060	0.833169	6.222691e-56	-8.615850e-47
Msa0299890	Msa1436040	0.811008	8.676276e-51	-8.615850e-47
Msa0299890	Msa1440600	0.829432	5.165415e-55	-8.615850e-47
Msa0299890	Msa1445190	0.810383	1.184557e-50	-8.615850e-47
Msa0299890	Msa1452120	0.806595	7.621227e-50	-8.615850e-47
Msa0299890	Msa1459180	0.834292	3.260621e-56	-8.615850e-47
Msa0299890	Msa1466460	0.830092	3.568543e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0299890	MtrunA17_Chr2g0324441	90.930	430	6	1	1	397	1	430	0.0	802
Msa0299890	MtrunA17_Chr4g0040121	65.197	431	113	4	1	397	1	428	0.0	563
Msa0299890	MtrunA17_Chr7g0245051	43.421	380	179	3	34	380	53	429	5.85e-111	333
Msa0299890	MtrunA17_Chr8g0334501	41.730	393	193	3	21	380	43	432	4.86e-110	330
Msa0299890	MtrunA17_Chr7g0245101	42.895	380	181	3	34	380	54	430	1.61e-109	329
Msa0299890	MtrunA17_Chr5g0404601	42.781	374	177	3	39	379	30	399	2.18e-107	323
Msa0299890	MtrunA17_Chr7g0271511	41.910	377	183	5	37	383	59	429	3.73e-104	314
Msa0299890	MtrunA17_Chr4g0020521	39.394	396	197	6	21	379	11	400	9.23e-104	313
Msa0299890	MtrunA17_Chr1g0193531	40.633	379	188	4	37	383	26	399	2.16e-102	309
Msa0299890	MtrunA17_Chr3g0141751	39.894	376	188	5	40	383	26	395	9.43e-102	307
Msa0299890	MtrunA17_Chr1g0193611	39.842	379	188	5	39	383	31	403	1.80e-99	301
Msa0299890	MtrunA17_Chr1g0193601	39.683	378	190	4	39	383	31	403	3.76e-99	300
Msa0299890	MtrunA17_Chr1g0193551	37.500	408	215	6	12	383	1	404	8.47e-98	297
Msa0299890	MtrunA17_Chr1g0193541	37.931	348	207	5	38	383	29	369	4.58e-80	251

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0299890	AT2G20680.1	63.133	415	118	2	3	384	5	417	0.0	540
Msa0299890	AT4G28320.1	61.667	420	124	3	11	397	12	427	0.0	520
Msa0299890	AT5G01930.1	42.520	381	181	5	33	380	42	417	5.87e-106	320
Msa0299890	AT3G10900.1	38.442	398	208	5	17	380	6	400	1.37e-103	312
Msa0299890	AT5G66460.1	40.909	374	182	4	39	379	30	397	2.59e-100	305
Msa0299890	AT3G10890.1	38.320	381	195	5	39	384	30	405	1.25e-98	300
Msa0299890	AT1G02310.1	38.220	382	195	7	37	383	26	401	4.05e-90	278
Msa0299890	AT1G02310.2	38.220	382	195	7	37	383	46	421	5.06e-90	278
Msa0299890	AT3G30540.1	32.222	360	171	5	17	343	6	325	1.58e-65	212

Find 114 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTGAAAACTGGGGCTAATA+TGG	0.184464	2_3:-55143581	Msa0299890:CDS
GAAATCAATATCAGAGATTT+TGG	0.195187	2_3:+55140350	None:intergenic
AATCATTCCAAATTGAAATT+AGG	0.219616	2_3:+55139481	None:intergenic
ACAATATCCTAATTTCAATT+TGG	0.221596	2_3:-55139488	Msa0299890:three_prime_UTR
GAGGAGTATTCTGATGATTA+TGG	0.231278	2_3:-55139724	Msa0299890:CDS
AAGTCTGGATGCCCAATAAT+TGG	0.233607	2_3:+55140395	None:intergenic
TGACTGTCAACCCCAATTAT+TGG	0.235416	2_3:-55140407	Msa0299890:CDS
AGGAAAGTTGAATTATTTAT+AGG	0.245976	2_3:+55144172	None:intergenic
AAAAGAAGCAAAACCCAAAA+TGG	0.248452	2_3:+55143795	None:intergenic
TGAATGGGTGGAATTCTTAT+TGG	0.297092	2_3:-55143654	Msa0299890:CDS
GACTGTCAACCCCAATTATT+GGG	0.301516	2_3:-55140406	Msa0299890:CDS
GTAGTAATGAGAAAATAATT+AGG	0.307860	2_3:+55144152	None:intergenic
TCATTAAAGTTAGTGTCTTT+TGG	0.308669	2_3:-55144064	Msa0299890:five_prime_UTR
TAGTTTGGCAATTCTTAGTT+GGG	0.322364	2_3:-55139753	Msa0299890:CDS
GTCATTTCTATATTCAATTC+CGG	0.324364	2_3:+55140932	None:intergenic
GTTCGTCAAATGCTGAAAAC+TGG	0.331006	2_3:-55143592	Msa0299890:CDS
TTAGTTTGGCAATTCTTAGT+TGG	0.337398	2_3:-55139754	Msa0299890:CDS
TTGAAATAACTACGGATTGA+TGG	0.340488	2_3:+55142087	None:intergenic
GTGGAATTCTTATTGGTTGA+TGG	0.368784	2_3:-55143647	Msa0299890:CDS
GATTTAAGTGACTACACATT+GGG	0.373083	2_3:-55139518	Msa0299890:three_prime_UTR
CTGGAGCAGGTGCCTTAGTT+TGG	0.373407	2_3:-55139768	Msa0299890:CDS
AGTCTGGATGCCCAATAATT+GGG	0.376159	2_3:+55140396	None:intergenic
TTTGAAGAAGGGAGAGAAAT+GGG	0.376956	2_3:-55143730	Msa0299890:CDS
AAGCAAGGCAAAATGGAATA+AGG	0.383619	2_3:-55142227	Msa0299890:CDS
GAGATAATGTTTGCAGGAAA+TGG	0.389136	2_3:-55143829	Msa0299890:exon
CAGTATGGAATAGAGATATC+TGG	0.399999	2_3:-55139551	Msa0299890:three_prime_UTR
GACTCACTGTTTGTAGAACT+TGG	0.410613	2_3:-55143558	Msa0299890:CDS
ATAATCCGTATTCGGAGAAT+AGG	0.412420	2_3:+55139884	None:intergenic
GTAAATAACTTGCAACCATA+TGG	0.414901	2_3:-55142189	Msa0299890:CDS
ACTAATTTAGTGACCCTTTG+AGG	0.416622	2_3:-55143899	Msa0299890:five_prime_UTR
AGCAATGCTTACCATTGATC+CGG	0.418166	2_3:+55140309	None:intergenic
ATAGCAGAAGCAAGGCAAAA+TGG	0.422959	2_3:-55142234	Msa0299890:CDS
AATACAAATAGTTATCCATC+TGG	0.427787	2_3:-55139257	Msa0299890:three_prime_UTR
TGTTGTGAGATAATGTTTGC+AGG	0.428403	2_3:-55143835	Msa0299890:exon
GAAGGGATGGATTAATCAAC+AGG	0.435221	2_3:-55139632	Msa0299890:CDS
GGTCTGATACAGTGAAGTTC+TGG	0.435898	2_3:+55139851	None:intergenic
GATATAATCAGACCCAAGTC+TGG	0.436740	2_3:+55140380	None:intergenic
ATAAAGCAGTCATGCAGGTT+GGG	0.442819	2_3:-55139661	Msa0299890:CDS
AGAACTTGGGCTTTCAATGA+TGG	0.449779	2_3:-55143544	Msa0299890:CDS
TACTGACTCTTCCCACCATA+TGG	0.450859	2_3:+55142174	None:intergenic
TCAAATGGGCATGGCAAGAA+GGG	0.452269	2_3:-55142149	Msa0299890:CDS
AGGAGTATTCTGATGATTAT+GGG	0.452599	2_3:-55139723	Msa0299890:CDS
AATTATTGGGCATCCAGACT+TGG	0.454898	2_3:-55140393	Msa0299890:CDS
ATCATAGAAGAACGAATCAT+TGG	0.455387	2_3:+55142110	None:intergenic
CTAATTTAGTGACCCTTTGA+GGG	0.467159	2_3:-55143898	Msa0299890:five_prime_UTR
CCGGTCCTATTCTCCGAATA+CGG	0.474856	2_3:-55139889	Msa0299890:CDS
TTCGTCAAATGCTGAAAACT+GGG	0.478082	2_3:-55143591	Msa0299890:CDS
TAGATCTCTCTCTTAGAACT+TGG	0.483874	2_3:+55144025	None:intergenic
CTGAAAACTGGGGCTAATAT+GGG	0.484284	2_3:-55143580	Msa0299890:CDS
GGAAGAGTCAGTATGTCAAA+TGG	0.484963	2_3:-55142164	Msa0299890:CDS
GACTTGGGTCTGATTATATC+CGG	0.485591	2_3:-55140377	Msa0299890:CDS
AACTGAAATTTGTCAACAAG+TGG	0.489345	2_3:-55139954	Msa0299890:CDS
TTCATATCTACCCGGATCAA+TGG	0.489590	2_3:-55140320	Msa0299890:intron
ACACAACTCAGTGAGATGAT+AGG	0.491985	2_3:+55139304	None:intergenic
GTCAAATGGGCATGGCAAGA+AGG	0.494866	2_3:-55142150	Msa0299890:CDS
ACTCACTGTTTGTAGAACTT+GGG	0.499364	2_3:-55143557	Msa0299890:CDS
AACTAAGAATTGCCAAACTA+AGG	0.499946	2_3:+55139756	None:intergenic
AAAGAAGCAAAACCCAAAAT+GGG	0.501043	2_3:+55143796	None:intergenic
CGTTGCATGACTGATCGTTC+CGG	0.503031	2_3:-55140873	Msa0299890:CDS
CACCTCTGTTCATATCTACC+CGG	0.515950	2_3:-55140328	Msa0299890:CDS
TCTGCAAAGAGAAACAAGTC+TGG	0.516164	2_3:-55139787	Msa0299890:CDS
ATGCTTTCTCACATTGAAGA+TGG	0.517878	2_3:-55139931	Msa0299890:CDS
TATAAAGCAGTCATGCAGGT+TGG	0.522266	2_3:-55139662	Msa0299890:CDS
GCAAGTTATTTACTAAGCAA+AGG	0.522679	2_3:+55142199	None:intergenic
GGACACAGTTTGTGTTGGAC+GGG	0.527806	2_3:-55143690	Msa0299890:CDS
ATTATTGGGCATCCAGACTT+GGG	0.530301	2_3:-55140392	Msa0299890:CDS
TGTAATTCTTGAAATAACTA+CGG	0.536027	2_3:+55142079	None:intergenic
AAGAGAAACAAGTCTGGAGC+AGG	0.538273	2_3:-55139781	Msa0299890:CDS
ATCATCTCACTGAGTTGTGT+TGG	0.539441	2_3:-55139301	Msa0299890:three_prime_UTR
GAAGAGTCAGTATGTCAAAT+GGG	0.540890	2_3:-55142163	Msa0299890:CDS
TGATTTAAGTGACTACACAT+TGG	0.544263	2_3:-55139519	Msa0299890:three_prime_UTR
ACTTACTTGGAGAGTGTCGC+CGG	0.545828	2_3:+55140854	None:intergenic
TGTTTGAGTAATTGAGTGTG+AGG	0.546992	2_3:-55143945	Msa0299890:five_prime_UTR
TGTGTTGATCGACTTTCCGC+AGG	0.551184	2_3:+55139694	None:intergenic
TATTTATAAAGCAGTCATGC+AGG	0.551496	2_3:-55139666	Msa0299890:CDS
GGGACACAGTTTGTGTTGGA+CGG	0.552716	2_3:-55143691	Msa0299890:CDS
GGTTGGGCAAAGCGAAGGGA+TGG	0.553242	2_3:-55139645	Msa0299890:CDS
TAAGAATGAGGAAATGATTG+AGG	0.558383	2_3:+55144203	None:intergenic
AAAGAGTGAAGCAAATAAAG+AGG	0.558705	2_3:-55144387	None:intergenic
AATAACTTGCAACCATATGG+TGG	0.566863	2_3:-55142186	Msa0299890:CDS
ATGCAGGTTGGGCAAAGCGA+AGG	0.567084	2_3:-55139650	Msa0299890:CDS
GTTTGGCAATTCTTAGTTGG+GGG	0.572306	2_3:-55139751	Msa0299890:CDS
TTATTTCAAGAATTACATCA+AGG	0.573575	2_3:-55142073	Msa0299890:intron
TTCTGCAGACTGTCTTGACA+AGG	0.576048	2_3:-55140968	Msa0299890:intron
GTCAGTATGTCAAATGGGCA+TGG	0.579900	2_3:-55142158	Msa0299890:CDS
AATGCTCTTCAAATTTCACC+TGG	0.579990	2_3:-55143514	Msa0299890:CDS
GAGTGAAGCAAATAAAGAGG+TGG	0.580198	2_3:-55144384	None:intergenic
TGGGCATGGCAAGAAGGGGT+AGG	0.584409	2_3:-55142144	Msa0299890:CDS
ATAGAAGAACGAATCATTGG+AGG	0.587282	2_3:+55142113	None:intergenic
GCAATGCTTACCATTGATCC+GGG	0.587323	2_3:+55140310	None:intergenic
AAATTTGTACTGAATGAAGA+AGG	0.588806	2_3:+55144345	None:intergenic
GAGTGTATAGTGTGGTAGCA+TGG	0.589089	2_3:-55139454	Msa0299890:three_prime_UTR
TAGGTGAACAACTAAGAATG+AGG	0.589645	2_3:+55144191	None:intergenic
TGCAGGTTGGGCAAAGCGAA+GGG	0.590290	2_3:-55139649	Msa0299890:CDS
AGTGAAGCAAATAAAGAGGT+GGG	0.592941	2_3:-55144383	None:intergenic
CCGTATTCGGAGAATAGGAC+CGG	0.594817	2_3:+55139889	None:intergenic
AAATGGGACACAGTTTGTGT+TGG	0.598891	2_3:-55143695	Msa0299890:CDS
AGTTTGGCAATTCTTAGTTG+GGG	0.603862	2_3:-55139752	Msa0299890:CDS
GTCTGGATGCCCAATAATTG+GGG	0.607898	2_3:+55140397	None:intergenic
CGATGAAGTACTGAAGAAGC+CGG	0.608266	2_3:-55139908	Msa0299890:CDS
ATAACTTGCAACCATATGGT+GGG	0.615616	2_3:-55142185	Msa0299890:CDS
ACTTGTTCATCAAAGTGACC+AGG	0.634282	2_3:+55143496	None:intergenic
GTGTTGATCGACTTTCCGCA+GGG	0.641488	2_3:+55139695	None:intergenic
TAGAAGTGAAACCGACGGTG+TGG	0.650208	2_3:+55144321	None:intergenic
ATGACTGAATTGAAACCAGA+TGG	0.650506	2_3:+55139242	None:intergenic
ATTACGTCATAGCAGAAGCA+AGG	0.656346	2_3:-55142242	Msa0299890:CDS
CAAATGGGCATGGCAAGAAG+GGG	0.658594	2_3:-55142148	Msa0299890:CDS
ATTTAAGTGACTACACATTG+GGG	0.670111	2_3:-55139517	Msa0299890:three_prime_UTR
TCGTCAAATGCTGAAAACTG+GGG	0.702936	2_3:-55143590	Msa0299890:CDS
AGAGTTAGAAGTGAAACCGA+CGG	0.710841	2_3:+55144316	None:intergenic
TGATTATGGGATCGTCCCTG+CGG	0.718885	2_3:-55139710	Msa0299890:CDS
ATCCGGGTAGATATGAACAG+AGG	0.729379	2_3:+55140326	None:intergenic
GATTAGTTGAGTGTATAGTG+TGG	0.740109	2_3:-55139462	Msa0299890:three_prime_UTR
GAACGATCAGTCATGCAACG+AGG	0.746364	2_3:+55140876	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAAATCTATTAGAAAAA+TGG	-	chr2_3:55144193-55144212	Msa0299890:five_prime_UTR	10.0%
!!	ATTATTATTATCCTCAAAAA+TGG	+	chr2_3:55139293-55139312	None:intergenic	15.0%
!!	TTATAAACAATTATAATCAC+AGG	+	chr2_3:55140410-55140429	None:intergenic	15.0%
!!	TTTCTATTCTTCAAAAATAA+TGG	+	chr2_3:55141263-55141282	None:intergenic	15.0%
!!!	ATTTAATAATACTTTTGTAC+TGG	-	chr2_3:55141696-55141715	Msa0299890:intron	15.0%
!!!	TAATTTTTTAAGTAGTTACT+TGG	+	chr2_3:55142749-55142768	None:intergenic	15.0%
!!	TAGAAAAAATGGATAAAATT+TGG	+	chr2_3:55142959-55142978	None:intergenic	15.0%
!!	ACACTATAAAATAGAAAAAA+TGG	+	chr2_3:55142970-55142989	None:intergenic	15.0%
!!!	TTATAATATATTTTCCAACA+GGG	+	chr2_3:55143003-55143022	None:intergenic	15.0%
!!!	AATTATATAACTTTTTGCAT+AGG	-	chr2_3:55143555-55143574	Msa0299890:CDS	15.0%
!!!	AGATTTTTATAAACAAAGTA+TGG	-	chr2_3:55144137-55144156	Msa0299890:five_prime_UTR	15.0%
!!	AGGAAAGTTGAATTATTTAT+AGG	+	chr2_3:55139394-55139413	None:intergenic	20.0%
!!	GTAGTAATGAGAAAATAATT+AGG	+	chr2_3:55139414-55139433	None:intergenic	20.0%
!!!	CTTCTCTTAATACATTTTTT+TGG	-	chr2_3:55139454-55139473	Msa0299890:three_prime_UTR	20.0%
!!!	AAAAACCAAACTTTTTTTTC+TGG	-	chr2_3:55139587-55139606	Msa0299890:exon	20.0%
!!!	AAAACCAAACTTTTTTTTCT+GGG	-	chr2_3:55139588-55139607	Msa0299890:exon	20.0%
!!!	GTTTTTATTTACATGTCTTT+TGG	-	chr2_3:55139794-55139813	Msa0299890:CDS	20.0%
!!!	CATAAAAAACTAATTTGTGT+CGG	+	chr2_3:55140220-55140239	None:intergenic	20.0%
!!!	TGACTTGTTTTTTGTTTTTT+GGG	-	chr2_3:55140258-55140277	Msa0299890:intron	20.0%
!!	AAAATGGTTAAATTCATGTT+TGG	-	chr2_3:55140559-55140578	Msa0299890:intron	20.0%
!!	AAGTAAAACATAAATCTCTA+AGG	+	chr2_3:55141036-55141055	None:intergenic	20.0%
!!	TGTAATTCTTGAAATAACTA+CGG	+	chr2_3:55141487-55141506	None:intergenic	20.0%
!!	TTATTTCAAGAATTACATCA+AGG	-	chr2_3:55141490-55141509	Msa0299890:intron	20.0%
!!!	CTTATAATATATTTTCCAAC+AGG	+	chr2_3:55143004-55143023	None:intergenic	20.0%
!!	ACAATATCCTAATTTCAATT+TGG	-	chr2_3:55144075-55144094	Msa0299890:five_prime_UTR	20.0%
!!	AATCATTCCAAATTGAAATT+AGG	+	chr2_3:55144085-55144104	None:intergenic	20.0%
!	AAATTTGTACTGAATGAAGA+AGG	+	chr2_3:55139221-55139240	None:intergenic	25.0%
!	TCAAAAATGGACAAAATTAG+CGG	+	chr2_3:55139280-55139299	None:intergenic	25.0%
!!	TCATTAAAGTTAGTGTCTTT+TGG	-	chr2_3:55139499-55139518	Msa0299890:three_prime_UTR	25.0%
!!	TTTATTTACATGTCTTTTGG+AGG	-	chr2_3:55139797-55139816	Msa0299890:CDS	25.0%
!!	TTATTTACATGTCTTTTGGA+GGG	-	chr2_3:55139798-55139817	Msa0299890:CDS	25.0%
!!!	TTAAGGTTTAGTTTTGAAGA+AGG	-	chr2_3:55139821-55139840	Msa0299890:CDS	25.0%
!!!	TAAGGTTTAGTTTTGAAGAA+GGG	-	chr2_3:55139822-55139841	Msa0299890:CDS	25.0%
!	ACATAATCAGAACAAATCAT+AGG	+	chr2_3:55140161-55140180	None:intergenic	25.0%
!	AACAACATGAAACTATGAAA+GGG	+	chr2_3:55140193-55140212	None:intergenic	25.0%
!!!	GTGACTTGTTTTTTGTTTTT+TGG	-	chr2_3:55140257-55140276	Msa0299890:intron	25.0%
!!!	GACTTGTTTTTTGTTTTTTG+GGG	-	chr2_3:55140259-55140278	Msa0299890:intron	25.0%
!	TTATAATAATGGTATCTTGC+TGG	-	chr2_3:55140424-55140443	Msa0299890:intron	25.0%
!	TATAATAATGGTATCTTGCT+GGG	-	chr2_3:55140425-55140444	Msa0299890:intron	25.0%
!	AGATACCTAGTTTATTAGTT+TGG	+	chr2_3:55140461-55140480	None:intergenic	25.0%
!!	AATAAACTAGGTATCTTTTG+TGG	-	chr2_3:55140465-55140484	Msa0299890:intron	25.0%
!!	TACCTAGTAAACACAATTTT+AGG	+	chr2_3:55140837-55140856	None:intergenic	25.0%
!	CTTAATATGTCCTTTATTAC+CGG	-	chr2_3:55141053-55141072	Msa0299890:intron	25.0%
!	TTAATATGTCCTTTATTACC+GGG	-	chr2_3:55141054-55141073	Msa0299890:intron	25.0%
!	TTATGAGCATGAATTGAAAT+CGG	+	chr2_3:55141135-55141154	None:intergenic	25.0%
!	AAACTTTCTTTCCTTCAATT+GGG	+	chr2_3:55141182-55141201	None:intergenic	25.0%
!	AAAACTTTCTTTCCTTCAAT+TGG	+	chr2_3:55141183-55141202	None:intergenic	25.0%
!	ATAGAAATTATGCTGAACTA+AGG	-	chr2_3:55141276-55141295	Msa0299890:intron	25.0%
!!	CTGACATAATGACTTTAAAA+AGG	+	chr2_3:55141632-55141651	None:intergenic	25.0%
!	AGTTATCATACGACAATTAA+AGG	+	chr2_3:55141672-55141691	None:intergenic	25.0%
!	TTATTATTCTTAAACTCAGC+AGG	-	chr2_3:55141727-55141746	Msa0299890:intron	25.0%
!	TCTTCAAAAAGAAAAAGAGA+AGG	+	chr2_3:55141866-55141885	None:intergenic	25.0%
!!	AAAACTTGTTTCCTTAAGTA+AGG	+	chr2_3:55142082-55142101	None:intergenic	25.0%
!!	TTACTTAAGGAAACAAGTTT+TGG	-	chr2_3:55142081-55142100	Msa0299890:CDS	25.0%
!	TCAATGAAGCTTGAAAAATA+AGG	+	chr2_3:55142296-55142315	None:intergenic	25.0%
!	ATACATAAGAAAACAGAAAG+CGG	+	chr2_3:55142358-55142377	None:intergenic	25.0%
!	GTCATTTCTATATTCAATTC+CGG	+	chr2_3:55142634-55142653	None:intergenic	25.0%
!!	AATTTTGCAATATTCAGATG+TGG	+	chr2_3:55142899-55142918	None:intergenic	25.0%
!!!	AATGTTGAATTTTTTTCTGC+AGG	-	chr2_3:55143032-55143051	Msa0299890:intron	25.0%
!!	GAAATCAATATCAGAGATTT+TGG	+	chr2_3:55143216-55143235	None:intergenic	25.0%
!	CAAAATATCCTTTATGAGTA+GGG	-	chr2_3:55143343-55143362	Msa0299890:intron	25.0%
!	AGAAGTAAGAAAGGTTATAA+GGG	-	chr2_3:55143431-55143450	Msa0299890:intron	25.0%
!!!	CTTTTTTGATAATCCGTATT+CGG	+	chr2_3:55143690-55143709	None:intergenic	25.0%
!	TGTTAGCAAAAAAAAAGAAG+TGG	-	chr2_3:55143974-55143993	Msa0299890:five_prime_UTR	25.0%
!	AAAAAAAGTTGACTACAGTA+TGG	-	chr2_3:55143997-55144016	Msa0299890:five_prime_UTR	25.0%
!	AATACAAATAGTTATCCATC+TGG	-	chr2_3:55144306-55144325	Msa0299890:five_prime_UTR	25.0%
!!	GCTAATTTTGTCCATTTTTG+AGG	-	chr2_3:55139279-55139298	Msa0299890:three_prime_UTR	30.0%
	TAAGAATGAGGAAATGATTG+AGG	+	chr2_3:55139363-55139382	None:intergenic	30.0%
!!	ATCTAGACATTTTAGCCAAT+TGG	-	chr2_3:55139556-55139575	Msa0299890:three_prime_UTR	30.0%
!!	TCTAGACATTTTAGCCAATT+GGG	-	chr2_3:55139557-55139576	Msa0299890:three_prime_UTR	30.0%
	CAAACCCAGAAAAAAAAGTT+TGG	+	chr2_3:55139595-55139614	None:intergenic	30.0%
!!!	AACTTTTTTTTCTGGGTTTG+TGG	-	chr2_3:55139595-55139614	Msa0299890:exon	30.0%
!!!	CTTTTGATTTTTCCCTCAAA+GGG	+	chr2_3:55139680-55139699	None:intergenic	30.0%
!	CTTTGAGGGAAAAATCAAAA+GGG	-	chr2_3:55139679-55139698	Msa0299890:CDS	30.0%
!!	TGGATTGTTTTATCCCATTT+TGG	-	chr2_3:55139754-55139773	Msa0299890:CDS	30.0%
!!	GGATTGTTTTATCCCATTTT+GGG	-	chr2_3:55139755-55139774	Msa0299890:CDS	30.0%
	AAAGAAGCAAAACCCAAAAT+GGG	+	chr2_3:55139770-55139789	None:intergenic	30.0%
	AAAAGAAGCAAAACCCAAAA+TGG	+	chr2_3:55139771-55139790	None:intergenic	30.0%
!	GGAATGTGTTTTATGTGAAT+GGG	-	chr2_3:55139894-55139913	Msa0299890:CDS	30.0%
!	CTTTGATGAACAAGTTTTTC+AGG	-	chr2_3:55140075-55140094	Msa0299890:intron	30.0%
	CAACAACATGAAACTATGAA+AGG	+	chr2_3:55140194-55140213	None:intergenic	30.0%
	AGTTATGTACTTGTTCCTTT+AGG	-	chr2_3:55140532-55140551	Msa0299890:intron	30.0%
	GTTATGTACTTGTTCCTTTA+GGG	-	chr2_3:55140533-55140552	Msa0299890:intron	30.0%
!	TTAACCATTTTCAACCCTAA+AGG	+	chr2_3:55140550-55140569	None:intergenic	30.0%
	GTTTGAATTGACAGTGAATT+TGG	+	chr2_3:55140684-55140703	None:intergenic	30.0%
	CTCCTAAAATTGTGTTTACT+AGG	-	chr2_3:55140832-55140851	Msa0299890:intron	30.0%
	AATTGTGTTTACTAGGTAGA+TGG	-	chr2_3:55140839-55140858	Msa0299890:intron	30.0%
!!	ACATAAATCTCTAAGGTACT+CGG	+	chr2_3:55141029-55141048	None:intergenic	30.0%
	TTTCTGTTATACCCAATTGA+AGG	-	chr2_3:55141168-55141187	Msa0299890:intron	30.0%
	AATTATGCTGAACTAAGGAT+TGG	-	chr2_3:55141281-55141300	Msa0299890:intron	30.0%
	GCAAGTTATTTACTAAGCAA+AGG	+	chr2_3:55141367-55141386	None:intergenic	30.0%
!	GTAAATAACTTGCAACCATA+TGG	-	chr2_3:55141374-55141393	Msa0299890:intron	30.0%
	ATCATAGAAGAACGAATCAT+TGG	+	chr2_3:55141456-55141475	None:intergenic	30.0%
!	TTGAAATAACTACGGATTGA+TGG	+	chr2_3:55141479-55141498	None:intergenic	30.0%
!	AATTAAAGGCATACAACATG+TGG	+	chr2_3:55141658-55141677	None:intergenic	30.0%
	GAAGATTGAATCAAATAGAC+AGG	-	chr2_3:55141881-55141900	Msa0299890:intron	30.0%
!!!	TGGTATCTTTTTTACCGTTT+AGG	-	chr2_3:55141927-55141946	Msa0299890:intron	30.0%
!	ATTTTTCCTATCTACAAGAC+TGG	-	chr2_3:55142047-55142066	Msa0299890:intron	30.0%
	ATTCTTTCATTAAGATGCCA+GGG	+	chr2_3:55142110-55142129	None:intergenic	30.0%
	AATTCTTTCATTAAGATGCC+AGG	+	chr2_3:55142111-55142130	None:intergenic	30.0%
	CCTTTATTGAGTAAAAGAAG+TGG	+	chr2_3:55142158-55142177	None:intergenic	30.0%
!	CCACTTCTTTTACTCAATAA+AGG	-	chr2_3:55142155-55142174	Msa0299890:CDS	30.0%
	ACCAAAAGTTAAAGGAAACA+GGG	+	chr2_3:55142331-55142350	None:intergenic	30.0%
	AACCAAAAGTTAAAGGAAAC+AGG	+	chr2_3:55142332-55142351	None:intergenic	30.0%
	ATGAAGAAGAAATTTGACCT+AGG	+	chr2_3:55142465-55142484	None:intergenic	30.0%
	TTAACAAAGAATAGCCTCAA+GGG	+	chr2_3:55142554-55142573	None:intergenic	30.0%
	TTTAACAAAGAATAGCCTCA+AGG	+	chr2_3:55142555-55142574	None:intergenic	30.0%
	ACAAGGAAAAATTCTTTCAC+CGG	-	chr2_3:55142612-55142631	Msa0299890:intron	30.0%
	TCATTTATGCTCAAAGTCAT+TGG	-	chr2_3:55143312-55143331	Msa0299890:intron	30.0%
	CATTTATGCTCAAAGTCATT+GGG	-	chr2_3:55143313-55143332	Msa0299890:intron	30.0%
!!!	CTCATAAAGGATATTTTGGT+CGG	+	chr2_3:55143341-55143360	None:intergenic	30.0%
!	CCTACTCATAAAGGATATTT+TGG	+	chr2_3:55143345-55143364	None:intergenic	30.0%
	CCAAAATATCCTTTATGAGT+AGG	-	chr2_3:55143342-55143361	Msa0299890:intron	30.0%
!	TACTTTTACCCTACTCATAA+AGG	+	chr2_3:55143354-55143373	None:intergenic	30.0%
	CAGAAGTAAGAAAGGTTATA+AGG	-	chr2_3:55143430-55143449	Msa0299890:intron	30.0%
!	TTCCCTTTTAGATTTGTCTT+CGG	-	chr2_3:55143515-55143534	Msa0299890:CDS	30.0%
	AACTGAAATTTGTCAACAAG+TGG	-	chr2_3:55143609-55143628	Msa0299890:CDS	30.0%
!	TCGTTTCATACATCTTTTCT+CGG	+	chr2_3:55143736-55143755	None:intergenic	30.0%
	AACTAAGAATTGCCAAACTA+AGG	+	chr2_3:55143810-55143829	None:intergenic	30.0%
!	TTAGTTTGGCAATTCTTAGT+TGG	-	chr2_3:55143809-55143828	Msa0299890:CDS	30.0%
	TAGTTTGGCAATTCTTAGTT+GGG	-	chr2_3:55143810-55143829	Msa0299890:CDS	30.0%
!!	AGGAGTATTCTGATGATTAT+GGG	-	chr2_3:55143840-55143859	Msa0299890:exon	30.0%
	TATTTATAAAGCAGTCATGC+AGG	-	chr2_3:55143897-55143916	Msa0299890:five_prime_UTR	30.0%
	TGATTTAAGTGACTACACAT+TGG	-	chr2_3:55144044-55144063	Msa0299890:five_prime_UTR	30.0%
	GATTTAAGTGACTACACATT+GGG	-	chr2_3:55144045-55144064	Msa0299890:five_prime_UTR	30.0%
	ATTTAAGTGACTACACATTG+GGG	-	chr2_3:55144046-55144065	Msa0299890:five_prime_UTR	30.0%
!	TGCTTCTTTTCACTTCTTTG+AGG	-	chr2_3:55139320-55139339	Msa0299890:three_prime_UTR	35.0%
	TAGGTGAACAACTAAGAATG+AGG	+	chr2_3:55139375-55139394	None:intergenic	35.0%
	TAGATCTCTCTCTTAGAACT+TGG	+	chr2_3:55139541-55139560	None:intergenic	35.0%
!!!	GGTTTTTTTGACAACCCAAT+TGG	+	chr2_3:55139574-55139593	None:intergenic	35.0%
	TGTTTGAGTAATTGAGTGTG+AGG	-	chr2_3:55139618-55139637	Msa0299890:CDS	35.0%
	ACTAATTTAGTGACCCTTTG+AGG	-	chr2_3:55139664-55139683	Msa0299890:CDS	35.0%
	CTAATTTAGTGACCCTTTGA+GGG	-	chr2_3:55139665-55139684	Msa0299890:CDS	35.0%
!!!	CCTTTTGATTTTTCCCTCAA+AGG	+	chr2_3:55139681-55139700	None:intergenic	35.0%
!	CCTTTGAGGGAAAAATCAAA+AGG	-	chr2_3:55139678-55139697	Msa0299890:CDS	35.0%
	TGTTGTGAGATAATGTTTGC+AGG	-	chr2_3:55139728-55139747	Msa0299890:CDS	35.0%
	GAGATAATGTTTGCAGGAAA+TGG	-	chr2_3:55139734-55139753	Msa0299890:CDS	35.0%
!!	TTTGGGTTTTGCTTCTTTTG+TGG	-	chr2_3:55139772-55139791	Msa0299890:CDS	35.0%
!!	TTTTGAAGAAGGGAGAGAAA+TGG	-	chr2_3:55139832-55139851	Msa0299890:CDS	35.0%
	TTTGAAGAAGGGAGAGAAAT+GGG	-	chr2_3:55139833-55139852	Msa0299890:CDS	35.0%
!!	ATGGGTTTTGTGATGAGAAA+TGG	-	chr2_3:55139851-55139870	Msa0299890:CDS	35.0%
!!	TGGGTTTTGTGATGAGAAAT+GGG	-	chr2_3:55139852-55139871	Msa0299890:CDS	35.0%
!	GGGAATGTGTTTTATGTGAA+TGG	-	chr2_3:55139893-55139912	Msa0299890:CDS	35.0%
!	ATGTGTTTTATGTGAATGGG+TGG	-	chr2_3:55139897-55139916	Msa0299890:CDS	35.0%
	TGAATGGGTGGAATTCTTAT+TGG	-	chr2_3:55139909-55139928	Msa0299890:CDS	35.0%
!	GTGGAATTCTTATTGGTTGA+TGG	-	chr2_3:55139916-55139935	Msa0299890:CDS	35.0%
	TTCGTCAAATGCTGAAAACT+GGG	-	chr2_3:55139972-55139991	Msa0299890:CDS	35.0%
	ACTCACTGTTTGTAGAACTT+GGG	-	chr2_3:55140006-55140025	Msa0299890:intron	35.0%
	AATGCTCTTCAAATTTCACC+TGG	-	chr2_3:55140049-55140068	Msa0299890:intron	35.0%
!	GTTTGTAGCTCTTGATTTTC+TGG	-	chr2_3:55140114-55140133	Msa0299890:intron	35.0%
!	ACTCAGTCATGCACAATTTT+AGG	+	chr2_3:55140342-55140361	None:intergenic	35.0%
	TGAGTGTGATTATGTCTCAT+AGG	-	chr2_3:55140357-55140376	Msa0299890:CDS	35.0%
	AGGGACCAAACTAATAAACT+AGG	-	chr2_3:55140453-55140472	Msa0299890:intron	35.0%
!!	TGTTCCTTTAGGGTTGAAAA+TGG	-	chr2_3:55140543-55140562	Msa0299890:intron	35.0%
	ACAGTGAATTTGGCAAATTC+TGG	+	chr2_3:55140674-55140693	None:intergenic	35.0%
	TGTCAATTCAAACATGCACT+TGG	-	chr2_3:55140691-55140710	Msa0299890:intron	35.0%
	AACATGCACTTGGTTAATTG+AGG	-	chr2_3:55140701-55140720	Msa0299890:intron	35.0%
!	AATTGAGGTACCATTGTTTC+TGG	-	chr2_3:55140716-55140735	Msa0299890:intron	35.0%
!	ATTGAGGTACCATTGTTTCT+GGG	-	chr2_3:55140717-55140736	Msa0299890:intron	35.0%
	GGTAGAATACAGAGAAAAAG+TGG	-	chr2_3:55140744-55140763	Msa0299890:intron	35.0%
!!	CAGGTTTAATGATGGACAAA+GGG	+	chr2_3:55140906-55140925	None:intergenic	35.0%
	CTTTGTCCATCATTAAACCT+GGG	-	chr2_3:55140905-55140924	Msa0299890:CDS	35.0%
	CAATTTCCCAGGTTTAATGA+TGG	+	chr2_3:55140914-55140933	None:intergenic	35.0%
	TGGGAAATTGACCCAAAAAA+CGG	-	chr2_3:55140924-55140943	Msa0299890:CDS	35.0%
!!!	AAACACCAACACCGTTTTTT+GGG	+	chr2_3:55140938-55140957	None:intergenic	35.0%
!	TGTGTAAGTGTTGTAAACCT+CGG	-	chr2_3:55141105-55141124	Msa0299890:intron	35.0%
	AAGCAAGGCAAAATGGAATA+AGG	-	chr2_3:55141336-55141355	Msa0299890:intron	35.0%
!	AATAACTTGCAACCATATGG+TGG	-	chr2_3:55141377-55141396	Msa0299890:intron	35.0%
!	ATAACTTGCAACCATATGGT+GGG	-	chr2_3:55141378-55141397	Msa0299890:intron	35.0%
	GAAGAGTCAGTATGTCAAAT+GGG	-	chr2_3:55141400-55141419	Msa0299890:intron	35.0%
	ATAGAAGAACGAATCATTGG+AGG	+	chr2_3:55141453-55141472	None:intergenic	35.0%
	ACACAAGCCATAGAAAACAT+AGG	+	chr2_3:55141753-55141772	None:intergenic	35.0%
	CAACTCCTATGTCAGATAAA+TGG	+	chr2_3:55141833-55141852	None:intergenic	35.0%
!	GAATCAAATAGACAGGCTTT+TGG	-	chr2_3:55141888-55141907	Msa0299890:intron	35.0%
	GGTAAAAAAGATACCATCAC+CGG	+	chr2_3:55141923-55141942	None:intergenic	35.0%
	TAGTCAGAGTCTAACGTTAT+CGG	+	chr2_3:55141970-55141989	None:intergenic	35.0%
	TAGATAGGAAAAATAGCGTC+GGG	+	chr2_3:55142041-55142060	None:intergenic	35.0%
	GTAGATAGGAAAAATAGCGT+CGG	+	chr2_3:55142042-55142061	None:intergenic	35.0%
	AATAAAGGAGTAGTGACGAA+GGG	-	chr2_3:55142170-55142189	Msa0299890:CDS	35.0%
	CTGTGAAGCAAAGAATTAGA+TGG	-	chr2_3:55142223-55142242	Msa0299890:CDS	35.0%
	GTTAAGAATGTGTGTGTGAA+AGG	+	chr2_3:55142274-55142293	None:intergenic	35.0%
!!!	CTTGTATCTTTGGTTTTCCT+AGG	-	chr2_3:55142445-55142464	Msa0299890:intron	35.0%
	AATCAATTCCCAGCCAAAAA+TGG	+	chr2_3:55142661-55142680	None:intergenic	35.0%
	GTGCAAATAAAGGACTTACT+TGG	+	chr2_3:55142725-55142744	None:intergenic	35.0%
	GTTACTTGGAGTGCAAATAA+AGG	+	chr2_3:55142735-55142754	None:intergenic	35.0%
!	TGAACTTTTCAATCTCCACA+TGG	+	chr2_3:55142819-55142838	None:intergenic	35.0%
	GATCTCTAATGAATTTGTCC+TGG	-	chr2_3:55142862-55142881	Msa0299890:intron	35.0%
!!!	TGAATTTTTTTCTGCAGGAG+TGG	-	chr2_3:55143037-55143056	Msa0299890:intron	35.0%
!!!	TATCAGAGATTTTGGAGTTC+CGG	+	chr2_3:55143208-55143227	None:intergenic	35.0%
	AGCATTGCTTGAACTCTATA+AGG	-	chr2_3:55143268-55143287	Msa0299890:intron	35.0%
!	TAGGGTAAAAGTACGTGTTA+TGG	-	chr2_3:55143361-55143380	Msa0299890:intron	35.0%
!	AGGGTAAAAGTACGTGTTAT+GGG	-	chr2_3:55143362-55143381	Msa0299890:intron	35.0%
!	AAAAGTACGTGTTATGGGTA+TGG	-	chr2_3:55143367-55143386	Msa0299890:intron	35.0%
	AAAGTACGTGTTATGGGTAT+GGG	-	chr2_3:55143368-55143387	Msa0299890:intron	35.0%
	ATAACCTTTCTTACTTCTGC+AGG	+	chr2_3:55143429-55143448	None:intergenic	35.0%
	TGCCGAAGACAAATCTAAAA+GGG	+	chr2_3:55143520-55143539	None:intergenic	35.0%
	ATGCCGAAGACAAATCTAAA+AGG	+	chr2_3:55143521-55143540	None:intergenic	35.0%
	ATGCTTTCTCACATTGAAGA+TGG	-	chr2_3:55143632-55143651	Msa0299890:CDS	35.0%
	ATAATCCGTATTCGGAGAAT+AGG	+	chr2_3:55143682-55143701	None:intergenic	35.0%
	AGTTTGGCAATTCTTAGTTG+GGG	-	chr2_3:55143811-55143830	Msa0299890:CDS	35.0%
!!	GAGGAGTATTCTGATGATTA+TGG	-	chr2_3:55143839-55143858	Msa0299890:exon	35.0%
	CAGTATGGAATAGAGATATC+TGG	-	chr2_3:55144012-55144031	Msa0299890:five_prime_UTR	35.0%
!	GATTAGTTGAGTGTATAGTG+TGG	-	chr2_3:55144101-55144120	Msa0299890:five_prime_UTR	35.0%
	ATGACTGAATTGAAACCAGA+TGG	+	chr2_3:55144324-55144343	None:intergenic	35.0%
!	GTACAAATTTTCCACACCGT+CGG	-	chr2_3:55139231-55139250	Msa0299890:three_prime_UTR	40.0%
	AGAGTTAGAAGTGAAACCGA+CGG	+	chr2_3:55139250-55139269	None:intergenic	40.0%
!!	ACATGTCTTTTGGAGGGTTA+AGG	-	chr2_3:55139804-55139823	Msa0299890:CDS	40.0%
	AAATGGGACACAGTTTGTGT+TGG	-	chr2_3:55139868-55139887	Msa0299890:CDS	40.0%
!	CGATTTTTCGTCGCGATTTA+AGG	-	chr2_3:55139949-55139968	Msa0299890:CDS	40.0%
	GTTCGTCAAATGCTGAAAAC+TGG	-	chr2_3:55139971-55139990	Msa0299890:CDS	40.0%
	TCGTCAAATGCTGAAAACTG+GGG	-	chr2_3:55139973-55139992	Msa0299890:CDS	40.0%
	CTGAAAACTGGGGCTAATAT+GGG	-	chr2_3:55139983-55140002	Msa0299890:CDS	40.0%
	GACTCACTGTTTGTAGAACT+TGG	-	chr2_3:55140005-55140024	Msa0299890:intron	40.0%
	AGAACTTGGGCTTTCAATGA+TGG	-	chr2_3:55140019-55140038	Msa0299890:intron	40.0%
	ACTTGTTCATCAAAGTGACC+AGG	+	chr2_3:55140070-55140089	None:intergenic	40.0%
	TTATGTGTGAGTGTGTGTTG+TGG	-	chr2_3:55140235-55140254	Msa0299890:intron	40.0%
!	AAGAGTGCACAAACTGAGTA+GGG	+	chr2_3:55140317-55140336	None:intergenic	40.0%
!	AAAGAGTGCACAAACTGAGT+AGG	+	chr2_3:55140318-55140337	None:intergenic	40.0%
	CTCATAGGTCTTTGCAAAAG+TGG	-	chr2_3:55140372-55140391	Msa0299890:CDS	40.0%
	ATAATGGTATCTTGCTGGGA+AGG	-	chr2_3:55140429-55140448	Msa0299890:intron	40.0%
	AGCATTTGCCAAAATCACAG+TGG	+	chr2_3:55140617-55140636	None:intergenic	40.0%
	GGATCTGACAAGCAATATGT+TGG	-	chr2_3:55140860-55140879	Msa0299890:CDS	40.0%
!!	CCAGGTTTAATGATGGACAA+AGG	+	chr2_3:55140907-55140926	None:intergenic	40.0%
	CCTTTGTCCATCATTAAACC+TGG	-	chr2_3:55140904-55140923	Msa0299890:CDS	40.0%
!!!	GTTTTTTGGGTCAATTTCCC+AGG	+	chr2_3:55140925-55140944	None:intergenic	40.0%
	ATTGACCCAAAAAACGGTGT+TGG	-	chr2_3:55140930-55140949	Msa0299890:CDS	40.0%
!!!	GAAACACCAACACCGTTTTT+TGG	+	chr2_3:55140939-55140958	None:intergenic	40.0%
!	GTGTAAGTGTTGTAAACCTC+GGG	-	chr2_3:55141106-55141125	Msa0299890:intron	40.0%
!	TGTAAGTGTTGTAAACCTCG+GGG	-	chr2_3:55141107-55141126	Msa0299890:intron	40.0%
!	ACTAAGGATTGGTATGTGAC+AGG	-	chr2_3:55141292-55141311	Msa0299890:intron	40.0%
	ATTACGTCATAGCAGAAGCA+AGG	-	chr2_3:55141321-55141340	Msa0299890:intron	40.0%
	ATAGCAGAAGCAAGGCAAAA+TGG	-	chr2_3:55141329-55141348	Msa0299890:intron	40.0%
	GGAAGAGTCAGTATGTCAAA+TGG	-	chr2_3:55141399-55141418	Msa0299890:intron	40.0%
	CCTATGTCAGATAAATGGTC+TGG	+	chr2_3:55141828-55141847	None:intergenic	40.0%
	CCAGACCATTTATCTGACAT+AGG	-	chr2_3:55141825-55141844	Msa0299890:intron	40.0%
	TAGACTCTGACTAATATCCG+AGG	-	chr2_3:55141977-55141996	Msa0299890:intron	40.0%
	AGACTCTGACTAATATCCGA+GGG	-	chr2_3:55141978-55141997	Msa0299890:intron	40.0%
	ACTAATATCCGAGGGTTGTT+GGG	-	chr2_3:55141986-55142005	Msa0299890:intron	40.0%
!	CAAGTTCCAGTCTTGTAGAT+AGG	+	chr2_3:55142056-55142075	None:intergenic	40.0%
	GGAACTTGAGACCTTACTTA+AGG	-	chr2_3:55142068-55142087	Msa0299890:intron	40.0%
	CAATAAAGGAGTAGTGACGA+AGG	-	chr2_3:55142169-55142188	Msa0299890:CDS	40.0%
	GTGAAAGGAAGAAGGAAGAA+AGG	+	chr2_3:55142259-55142278	None:intergenic	40.0%
	ATGTGTGTGTGAAAGGAAGA+AGG	+	chr2_3:55142267-55142286	None:intergenic	40.0%
!!	GCCCTGTTTCCTTTAACTTT+TGG	-	chr2_3:55142327-55142346	Msa0299890:intron	40.0%
	GCGGTGAAACCAAAAGTTAA+AGG	+	chr2_3:55142339-55142358	None:intergenic	40.0%
	CCAAAGATACAAGCTTCATG+TGG	+	chr2_3:55142438-55142457	None:intergenic	40.0%
	CCACATGAAGCTTGTATCTT+TGG	-	chr2_3:55142435-55142454	Msa0299890:intron	40.0%
!	AGAAATGACCCCACCATTTT+TGG	-	chr2_3:55142645-55142664	Msa0299890:intron	40.0%
	AATTCCCAGCCAAAAATGGT+GGG	+	chr2_3:55142657-55142676	None:intergenic	40.0%
	AGAGTCCTTCATATTGAGCT+CGG	+	chr2_3:55142934-55142953	None:intergenic	40.0%
!!	GTGTAAGTTTTAGTCCCTGT+TGG	-	chr2_3:55142986-55143005	Msa0299890:intron	40.0%
	GGAGTGGATAGAAGAAATGT+CGG	-	chr2_3:55143053-55143072	Msa0299890:intron	40.0%
!	AAGAACCATATGCTGACTGT+GGG	-	chr2_3:55143096-55143115	Msa0299890:intron	40.0%
!	TGTGGGGAATGAAGGTTTTA+TGG	-	chr2_3:55143113-55143132	Msa0299890:intron	40.0%
	GTCAAATCCTTTGGGTCATT+CGG	+	chr2_3:55143140-55143159	None:intergenic	40.0%
	GGTTGACAGTCAAATCCTTT+GGG	+	chr2_3:55143148-55143167	None:intergenic	40.0%
	TGACTGTCAACCCCAATTAT+TGG	-	chr2_3:55143156-55143175	Msa0299890:intron	40.0%
	GACTGTCAACCCCAATTATT+GGG	-	chr2_3:55143157-55143176	Msa0299890:intron	40.0%
	AGTCTGGATGCCCAATAATT+GGG	+	chr2_3:55143170-55143189	None:intergenic	40.0%
	AAGTCTGGATGCCCAATAAT+TGG	+	chr2_3:55143171-55143190	None:intergenic	40.0%
	AATTATTGGGCATCCAGACT+TGG	-	chr2_3:55143170-55143189	Msa0299890:intron	40.0%
	ATTATTGGGCATCCAGACTT+GGG	-	chr2_3:55143171-55143190	Msa0299890:intron	40.0%
	GATATAATCAGACCCAAGTC+TGG	+	chr2_3:55143186-55143205	None:intergenic	40.0%
	GACTTGGGTCTGATTATATC+CGG	-	chr2_3:55143186-55143205	Msa0299890:intron	40.0%
	TTCATATCTACCCGGATCAA+TGG	-	chr2_3:55143243-55143262	Msa0299890:intron	40.0%
	AGCAATGCTTACCATTGATC+CGG	+	chr2_3:55143257-55143276	None:intergenic	40.0%
	ACAACCTGCAGAAGTAAGAA+AGG	-	chr2_3:55143422-55143441	Msa0299890:intron	40.0%
!	CTTTTTGCATAGGTTTCACG+AGG	-	chr2_3:55143565-55143584	Msa0299890:CDS	40.0%
	TCTGCAAAGAGAAACAAGTC+TGG	-	chr2_3:55143776-55143795	Msa0299890:CDS	40.0%
	GTTTGGCAATTCTTAGTTGG+GGG	-	chr2_3:55143812-55143831	Msa0299890:CDS	40.0%
	TATAAAGCAGTCATGCAGGT+TGG	-	chr2_3:55143901-55143920	Msa0299890:five_prime_UTR	40.0%
	ATAAAGCAGTCATGCAGGTT+GGG	-	chr2_3:55143902-55143921	Msa0299890:five_prime_UTR	40.0%
!!	GAAGGGATGGATTAATCAAC+AGG	-	chr2_3:55143931-55143950	Msa0299890:five_prime_UTR	40.0%
	ACACAACTCAGTGAGATGAT+AGG	+	chr2_3:55144262-55144281	None:intergenic	40.0%
	ATCATCTCACTGAGTTGTGT+TGG	-	chr2_3:55144262-55144281	Msa0299890:five_prime_UTR	40.0%
	GCTGAAAACTGGGGCTAATA+TGG	-	chr2_3:55139982-55140001	Msa0299890:CDS	45.0%
!!	GTACCATTGTTTCTGGGAAG+TGG	-	chr2_3:55140723-55140742	Msa0299890:intron	45.0%
	CTACCACTTCCCAGAAACAA+TGG	+	chr2_3:55140729-55140748	None:intergenic	45.0%
	GCACTAGAACCCGGTAATAA+AGG	+	chr2_3:55141066-55141085	None:intergenic	45.0%
	GATTGGTATGTGACAGGCTT+TGG	-	chr2_3:55141298-55141317	Msa0299890:intron	45.0%
!!	TACTGACTCTTCCCACCATA+TGG	+	chr2_3:55141392-55141411	None:intergenic	45.0%
	GTCAGTATGTCAAATGGGCA+TGG	-	chr2_3:55141405-55141424	Msa0299890:intron	45.0%
	TCAAATGGGCATGGCAAGAA+GGG	-	chr2_3:55141414-55141433	Msa0299890:intron	45.0%
	GGGGAAAGGAGAAAGAGAAA+AGG	+	chr2_3:55141545-55141564	None:intergenic	45.0%
	AAGAATGCCACTCCAACCAT+TGG	+	chr2_3:55141591-55141610	None:intergenic	45.0%
!	CAGCAGGCCTATGTTTTCTA+TGG	-	chr2_3:55141743-55141762	Msa0299890:intron	45.0%
	CCGGTGTTCTATGACCTAAA+CGG	+	chr2_3:55141944-55141963	None:intergenic	45.0%
	CCGTTTAGGTCATAGAACAC+CGG	-	chr2_3:55141941-55141960	Msa0299890:intron	45.0%
	AGTCTAACGTTATCGGAGAC+CGG	+	chr2_3:55141963-55141982	None:intergenic	45.0%
	GACTAATATCCGAGGGTTGT+TGG	-	chr2_3:55141985-55142004	Msa0299890:intron	45.0%
!!!	GAAACAAGTTTTGGTGTCCC+TGG	-	chr2_3:55142090-55142109	Msa0299890:CDS	45.0%
	CAAGCTTCATGTGGAAGTCA+TGG	+	chr2_3:55142429-55142448	None:intergenic	45.0%
	TTCTGCAGACTGTCTTGACA+AGG	-	chr2_3:55142595-55142614	Msa0299890:intron	45.0%
	ATTCCCAGCCAAAAATGGTG+GGG	+	chr2_3:55142656-55142675	None:intergenic	45.0%
	CAATTCCCAGCCAAAAATGG+TGG	+	chr2_3:55142658-55142677	None:intergenic	45.0%
	CTTCCTCCTTACTACATGCT+GGG	-	chr2_3:55142788-55142807	Msa0299890:intron	45.0%
	GATCTTCCCAGCATGTAGTA+AGG	+	chr2_3:55142797-55142816	None:intergenic	45.0%
!	CAAGAACCATATGCTGACTG+TGG	-	chr2_3:55143095-55143114	Msa0299890:intron	45.0%
!	AGAACCATATGCTGACTGTG+GGG	-	chr2_3:55143097-55143116	Msa0299890:intron	45.0%
	TTATGGTCCGAATGACCCAA+AGG	-	chr2_3:55143130-55143149	Msa0299890:intron	45.0%
	GGGTTGACAGTCAAATCCTT+TGG	+	chr2_3:55143149-55143168	None:intergenic	45.0%
	GTCTGGATGCCCAATAATTG+GGG	+	chr2_3:55143169-55143188	None:intergenic	45.0%
	CACCTCTGTTCATATCTACC+CGG	-	chr2_3:55143235-55143254	Msa0299890:intron	45.0%
	ATCCGGGTAGATATGAACAG+AGG	+	chr2_3:55143240-55143259	None:intergenic	45.0%
	GCAATGCTTACCATTGATCC+GGG	+	chr2_3:55143256-55143275	None:intergenic	45.0%
!!	CGATGAAGTACTGAAGAAGC+CGG	-	chr2_3:55143655-55143674	Msa0299890:CDS	45.0%
	GGTCTGATACAGTGAAGTTC+TGG	+	chr2_3:55143715-55143734	None:intergenic	45.0%
!	AAGAGAAACAAGTCTGGAGC+AGG	-	chr2_3:55143782-55143801	Msa0299890:CDS	45.0%
	GCAATTCTTAGTTGGGGGAA+TGG	-	chr2_3:55143817-55143836	Msa0299890:CDS	45.0%
	ATTCTTAGTTGGGGGAATGG+AGG	-	chr2_3:55143820-55143839	Msa0299890:CDS	45.0%
	GAGTGTATAGTGTGGTAGCA+TGG	-	chr2_3:55144109-55144128	Msa0299890:five_prime_UTR	45.0%
!!	ATTATAATTGTTTATAATAA+TGG	-	chr2_3:55140413-55140432	Msa0299890:CDS	5.0%
!!!	AGTAAAAATTATATATTTTT+TGG	-	chr2_3:55144365-55144384	Msa0299890:five_prime_UTR	5.0%
	TAGAAGTGAAACCGACGGTG+TGG	+	chr2_3:55139245-55139264	None:intergenic	50.0%
	GGGACACAGTTTGTGTTGGA+CGG	-	chr2_3:55139872-55139891	Msa0299890:CDS	50.0%
	GGACACAGTTTGTGTTGGAC+GGG	-	chr2_3:55139873-55139892	Msa0299890:CDS	50.0%
!!	ACAGCGTGCCACTGTGATTT+TGG	-	chr2_3:55140606-55140625	Msa0299890:intron	50.0%
	TGGCAAGCGATCTCTCTCTA+TGG	-	chr2_3:55140764-55140783	Msa0299890:intron	50.0%
!	TTACCGGGTTCTAGTGCAAG+TGG	-	chr2_3:55141069-55141088	Msa0299890:intron	50.0%
	CAACCACTTGCACTAGAACC+CGG	+	chr2_3:55141075-55141094	None:intergenic	50.0%
	GAATTGAAATCGGTACCCCG+AGG	+	chr2_3:55141125-55141144	None:intergenic	50.0%
	GTCAAATGGGCATGGCAAGA+AGG	-	chr2_3:55141413-55141432	Msa0299890:intron	50.0%
	CAAATGGGCATGGCAAGAAG+GGG	-	chr2_3:55141415-55141434	Msa0299890:intron	50.0%
	GGTAAAGAGAAAGGGGGGAA+AGG	+	chr2_3:55141559-55141578	None:intergenic	50.0%
	ATGCCACTCCAACCATTGGA+GGG	+	chr2_3:55141587-55141606	None:intergenic	50.0%
	AATGCCACTCCAACCATTGG+AGG	+	chr2_3:55141588-55141607	None:intergenic	50.0%
!!	AGGCTTTTGGAAGCTGAGAC+CGG	-	chr2_3:55141901-55141920	Msa0299890:intron	50.0%
	GAGAGCTTACCCTCCTCTAT+GGG	+	chr2_3:55142019-55142038	None:intergenic	50.0%
!	GAAGGAAGAAAGGCGTGCAT+TGG	+	chr2_3:55142249-55142268	None:intergenic	50.0%
	CTCTATGTTTGCAGCCCTTG+AGG	-	chr2_3:55142537-55142556	Msa0299890:intron	50.0%
!!!	ATGACCCCACCATTTTTGGC+TGG	-	chr2_3:55142649-55142668	Msa0299890:intron	50.0%
!!!	TGACCCCACCATTTTTGGCT+GGG	-	chr2_3:55142650-55142669	Msa0299890:intron	50.0%
	GAACGATCAGTCATGCAACG+AGG	+	chr2_3:55142690-55142709	None:intergenic	50.0%
	CGTTGCATGACTGATCGTTC+CGG	-	chr2_3:55142690-55142709	Msa0299890:intron	50.0%
!!	ACTTACTTGGAGAGTGTCGC+CGG	+	chr2_3:55142712-55142731	None:intergenic	50.0%
	GCTTCCTCCTTACTACATGC+TGG	-	chr2_3:55142787-55142806	Msa0299890:intron	50.0%
	CTTCCCAGCATGTAGTAAGG+AGG	+	chr2_3:55142794-55142813	None:intergenic	50.0%
	ACATGCTGGGAAGATCCATG+TGG	-	chr2_3:55142801-55142820	Msa0299890:intron	50.0%
	GATGTGGAGAGAAAACAGCC+AGG	+	chr2_3:55142883-55142902	None:intergenic	50.0%
	TGCGTCCGAGCTCAATATGA+AGG	-	chr2_3:55142926-55142945	Msa0299890:intron	50.0%
	CATTCCCCACAGTCAGCATA+TGG	+	chr2_3:55143104-55143123	None:intergenic	50.0%
!	ATGCTGACTGTGGGGAATGA+AGG	-	chr2_3:55143105-55143124	Msa0299890:intron	50.0%
	TTATGGGTATGGGCACGCAT+AGG	-	chr2_3:55143378-55143397	Msa0299890:intron	50.0%
	CCGTATTCGGAGAATAGGAC+CGG	+	chr2_3:55143677-55143696	None:intergenic	50.0%
	CCGGTCCTATTCTCCGAATA+CGG	-	chr2_3:55143674-55143693	Msa0299890:CDS	50.0%
	TGATTATGGGATCGTCCCTG+CGG	-	chr2_3:55143853-55143872	Msa0299890:five_prime_UTR	50.0%
!	GTGTTGATCGACTTTCCGCA+GGG	+	chr2_3:55143871-55143890	None:intergenic	50.0%
!	TGTGTTGATCGACTTTCCGC+AGG	+	chr2_3:55143872-55143891	None:intergenic	50.0%
	TGGTATCTTGCTGGGAAGGC+AGG	-	chr2_3:55140433-55140452	Msa0299890:intron	55.0%
	GGTATCTTGCTGGGAAGGCA+GGG	-	chr2_3:55140434-55140453	Msa0299890:intron	55.0%
!	CGGGTTCTAGTGCAAGTGGT+TGG	-	chr2_3:55141073-55141092	Msa0299890:intron	55.0%
	CGTGGGGTAAAGAGAAAGGG+GGG	+	chr2_3:55141564-55141583	None:intergenic	55.0%
	GCGTGGGGTAAAGAGAAAGG+GGG	+	chr2_3:55141565-55141584	None:intergenic	55.0%
	GGCGTGGGGTAAAGAGAAAG+GGG	+	chr2_3:55141566-55141585	None:intergenic	55.0%
	GGGCGTGGGGTAAAGAGAAA+GGG	+	chr2_3:55141567-55141586	None:intergenic	55.0%
	AGGGCGTGGGGTAAAGAGAA+AGG	+	chr2_3:55141568-55141587	None:intergenic	55.0%
	TTGGAAGCTGAGACCGGTGA+TGG	-	chr2_3:55141907-55141926	Msa0299890:intron	55.0%
	ATCCGAGGGTTGTTGGGAAG+AGG	-	chr2_3:55141992-55142011	Msa0299890:intron	55.0%
	GTCCTCTTCCCAACAACCCT+CGG	+	chr2_3:55141997-55142016	None:intergenic	55.0%
	GTTGGGAAGAGGACCCATAG+AGG	-	chr2_3:55142003-55142022	Msa0299890:intron	55.0%
	GGAAGAGGACCCATAGAGGA+GGG	-	chr2_3:55142007-55142026	Msa0299890:intron	55.0%
	GGAGAGCTTACCCTCCTCTA+TGG	+	chr2_3:55142020-55142039	None:intergenic	55.0%
	GCACTGCTGCGGTGATGATT+CGG	+	chr2_3:55142196-55142215	None:intergenic	55.0%
	ACAGCACGATTGCACTGCTG+CGG	+	chr2_3:55142207-55142226	None:intergenic	55.0%
	CTGGAGCAGGTGCCTTAGTT+TGG	-	chr2_3:55143795-55143814	Msa0299890:CDS	55.0%
!	ATGCAGGTTGGGCAAAGCGA+AGG	-	chr2_3:55143913-55143932	Msa0299890:five_prime_UTR	55.0%
!	TGCAGGTTGGGCAAAGCGAA+GGG	-	chr2_3:55143914-55143933	Msa0299890:five_prime_UTR	55.0%
	TGGGCATGGCAAGAAGGGGT+AGG	-	chr2_3:55141419-55141438	Msa0299890:intron	60.0%
	CTTTACCCCACGCCCTCCAA+TGG	-	chr2_3:55141572-55141591	Msa0299890:intron	60.0%
!	TCCAACCATTGGAGGGCGTG+GGG	+	chr2_3:55141580-55141599	None:intergenic	60.0%
!	CTCCAACCATTGGAGGGCGT+GGG	+	chr2_3:55141581-55141600	None:intergenic	60.0%
	ACTCCAACCATTGGAGGGCG+TGG	+	chr2_3:55141582-55141601	None:intergenic	60.0%
	ACGCCCTCCAATGGTTGGAG+TGG	-	chr2_3:55141581-55141600	Msa0299890:intron	60.0%
	GGGAAGAGGACCCATAGAGG+AGG	-	chr2_3:55142006-55142025	Msa0299890:intron	60.0%
	GGTTGGGCAAAGCGAAGGGA+TGG	-	chr2_3:55143918-55143937	Msa0299890:five_prime_UTR	60.0%
	ACCCCACGCCCTCCAATGGT+TGG	-	chr2_3:55141576-55141595	Msa0299890:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_3	gene	55139191	55144394	55139191	ID=Msa0299890;Name=Msa0299890
chr2_3	mRNA	55139191	55144394	55139191	ID=Msa0299890-mRNA-1;Parent=Msa0299890;Name=Msa0299890-mRNA-1;_AED=0.13;_eAED=0.13;_QI=549\|0.75\|0.8\|1\|1\|1\|5\|415\|397
chr2_3	exon	55139191	55140008	55139191	ID=Msa0299890-mRNA-1:exon:17627;Parent=Msa0299890-mRNA-1
chr2_3	exon	55140321	55140433	55140321	ID=Msa0299890-mRNA-1:exon:17626;Parent=Msa0299890-mRNA-1
chr2_3	exon	55140860	55140982	55140860	ID=Msa0299890-mRNA-1:exon:17625;Parent=Msa0299890-mRNA-1
chr2_3	exon	55142074	55142271	55142074	ID=Msa0299890-mRNA-1:exon:17624;Parent=Msa0299890-mRNA-1
chr2_3	exon	55143489	55144394	55143489	ID=Msa0299890-mRNA-1:exon:17623;Parent=Msa0299890-mRNA-1
chr2_3	five_prime_UTR	55143846	55144394	55143846	ID=Msa0299890-mRNA-1:five_prime_utr;Parent=Msa0299890-mRNA-1
chr2_3	CDS	55143489	55143845	55143489	ID=Msa0299890-mRNA-1:cds;Parent=Msa0299890-mRNA-1
chr2_3	CDS	55142074	55142271	55142074	ID=Msa0299890-mRNA-1:cds;Parent=Msa0299890-mRNA-1
chr2_3	CDS	55140860	55140982	55140860	ID=Msa0299890-mRNA-1:cds;Parent=Msa0299890-mRNA-1
chr2_3	CDS	55140321	55140433	55140321	ID=Msa0299890-mRNA-1:cds;Parent=Msa0299890-mRNA-1
chr2_3	CDS	55139606	55140008	55139606	ID=Msa0299890-mRNA-1:cds;Parent=Msa0299890-mRNA-1
chr2_3	three_prime_UTR	55139191	55139605	55139191	ID=Msa0299890-mRNA-1:three_prime_utr;Parent=Msa0299890-mRNA-1

Gene Sequence

>Msa0299890

ATGTTTGCAGGAAATGGATTGTTTTATCCCATTTTGGGTTTTGCTTCTTTTGTGGTTTTTATTTACATGTCTTTTGGAGGGTTAAGGTTTAGTTTTGAAGAAGGGAGAGAAATGGGTTTTGTGATGAGAAATGGGACACAGTTTGTGTTGGACGGGAATGTGTTTTATGTGAATGGGTGGAATTCTTATTGGTTGATGGATCATTCTGTCGATTTTTCGTCGCGATTTAAGGTTCGTCAAATGCTGAAAACTGGGGCTAATATGGGACTCACTGTTTGTAGAACTTGGGCTTTCAATGATGGTCATTATAATGCTCTTCAAATTTCACCTGGTCACTTTGATGAACAAGTTTTTCAGGCTTTGGATTACGTCATAGCAGAAGCAAGGCAAAATGGAATAAGGCTGCTCCTTTGCTTAGTAAATAACTTGCAACCATATGGTGGGAAGAGTCAGTATGTCAAATGGGCATGGCAAGAAGGGGTAGGATTAAGCGCCTCCAATGATTCGTTCTTCTATGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTGTCTTGACAAGGAAAAATTCTTTCACCGGAATTGAATATAGAAATGACCCCACCATTTTTGGCTGGGAATTGATTAATGAGCCTCGTTGCATGACTGATCGTTCCGGCGACACTCTCCAAGATTTGACTGTCAACCCCAATTATTGGGCATCCAGACTTGGGTCTGATTATATCCGGAACTCCAAAATCTCTGATATTGATTTCACCTCTGTTCATATCTACCCGGATCAATGGTTTCACGAGGATGAAAAAGCAATTGAAACTCAACTGAAATTTGTCAACAAGTGGATGCTTTCTCACATTGAAGATGGCGATGAAGTACTGAAGAAGCCGGTCCTATTCTCCGAATACGGATTATCAAAAAAGAACCAGAACTTCACTGTATCAGACCGAGAAAAGATGTATGAAACGATTTTAAACATCGTTTACAAATCTGCAAAGAGAAACAAGTCTGGAGCAGGTGCCTTAGTTTGGCAATTCTTAGTTGGGGGAATGGAGGAGTATTCTGATGATTATGGGATCGTCCCTGCGGAAAGTCGATCAACACAATCGCTATTTATAAAGCAGTCATGCAGGTTGGGCAAAGCGAAGGGATGGATTAATCAACAGGATGTAAATTTCAAAGCACTTTGTTAG

Protein sequence

>Msa0299890

MFAGNGLFYPILGFASFVVFIYMSFGGLRFSFEEGREMGFVMRNGTQFVLDGNVFYVNGWNSYWLMDHSVDFSSRFKVRQMLKTGANMGLTVCRTWAFNDGHYNALQISPGHFDEQVFQALDYVIAEARQNGIRLLLCLVNNLQPYGGKSQYVKWAWQEGVGLSASNDSFFYDPSIRSYFKNYIKTVLTRKNSFTGIEYRNDPTIFGWELINEPRCMTDRSGDTLQDLTVNPNYWASRLGSDYIRNSKISDIDFTSVHIYPDQWFHEDEKAIETQLKFVNKWMLSHIEDGDEVLKKPVLFSEYGLSKKNQNFTVSDREKMYETILNIVYKSAKRNKSGAGALVWQFLVGGMEEYSDDYGIVPAESRSTQSLFIKQSCRLGKAKGWINQQDVNFKALC*