Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754480 | XP_003610997.1 | 97.734 | 662 | 15 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1337 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754480 | sp|Q9T0A0|LACS4_ARATH | 75.762 | 656 | 159 | 0 | 3 | 658 | 4 | 659 | 0.0 | 1069 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754480 | G7KAK9 | 97.734 | 662 | 15 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1337 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0046170 | Msa0754480 | 0.808974 | 2.378624e-50 | -8.615850e-47 |
Msa0657340 | Msa0754480 | 0.810874 | 9.279303e-51 | -8.615850e-47 |
Msa0701430 | Msa0754480 | 0.822292 | 2.561034e-53 | -8.615850e-47 |
Msa0716620 | Msa0754480 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
Msa0723770 | Msa0754480 | 0.812819 | 3.498885e-51 | -8.615850e-47 |
Msa0731580 | Msa0754480 | 0.806421 | 8.295230e-50 | -8.615850e-47 |
Msa0744710 | Msa0754480 | 0.809710 | 1.654179e-50 | -8.615850e-47 |
Msa0752600 | Msa0754480 | 0.864656 | 1.039127e-64 | -8.615850e-47 |
Msa0754480 | Msa0765140 | 0.821466 | 3.977531e-53 | -8.615850e-47 |
Msa0754480 | Msa0826240 | 0.811515 | 6.735845e-51 | -8.615850e-47 |
Msa0754480 | Msa0829990 | 0.806717 | 7.181327e-50 | -8.615850e-47 |
Msa0754480 | Msa0830930 | 0.892188 | 1.998217e-74 | -8.615850e-47 |
Msa0754480 | Msa1003920 | 0.821014 | 5.057486e-53 | -8.615850e-47 |
Msa0754480 | Msa1027340 | 0.804021 | 2.638506e-49 | -8.615850e-47 |
Msa0754480 | Msa1027400 | 0.808126 | 3.609983e-50 | -8.615850e-47 |
Msa0754480 | Msa1071350 | 0.812642 | 3.824961e-51 | -8.615850e-47 |
Msa0754480 | Msa1077970 | 0.824537 | 7.649731e-54 | -8.615850e-47 |
Msa0754480 | Msa1087630 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
Msa0754480 | Msa1110900 | 0.801788 | 7.630848e-49 | -8.615850e-47 |
Msa0754480 | Msa1154570 | 0.810193 | 1.301572e-50 | -8.615850e-47 |
Msa0754480 | Msa1157670 | 0.806500 | 7.980547e-50 | -8.615850e-47 |
Msa0754480 | Msa1202110 | 0.807042 | 6.133243e-50 | -8.615850e-47 |
Msa0754480 | Msa1254870 | 0.802005 | 6.888507e-49 | -8.615850e-47 |
Msa0754480 | Msa1384700 | 0.819275 | 1.264786e-52 | -8.615850e-47 |
Msa0754480 | Msa1402160 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
Msa0754480 | Msa1404050 | 0.809169 | 2.160750e-50 | -8.615850e-47 |
Msa0754480 | Msa1409690 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
Msa0139530 | Msa0754480 | 0.807602 | 4.666308e-50 | -8.615850e-47 |
Msa0415680 | Msa0754480 | 0.807979 | 3.878498e-50 | -8.615850e-47 |
Msa0242720 | Msa0754480 | 0.841717 | 4.011879e-58 | -8.615850e-47 |
Msa0265650 | Msa0754480 | 0.813891 | 2.034011e-51 | -8.615850e-47 |
Msa0320170 | Msa0754480 | 0.835897 | 1.284163e-56 | -8.615850e-47 |
Msa0345890 | Msa0754480 | 0.809679 | 1.679808e-50 | -8.615850e-47 |
Msa0557240 | Msa0754480 | 0.801899 | 7.242618e-49 | -8.615850e-47 |
Msa0565180 | Msa0754480 | 0.809020 | 2.325482e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754480 | MtrunA17_Chr5g0396691 | 97.734 | 662 | 15 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1337 |
Msa0754480 | MtrunA17_Chr5g0396711 | 95.770 | 662 | 28 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1307 |
Msa0754480 | MtrunA17_Chr8g0388081 | 77.685 | 596 | 133 | 0 | 62 | 657 | 1 | 596 | 0.0 | 1012 |
Msa0754480 | MtrunA17_Chr4g0034181 | 58.154 | 650 | 270 | 2 | 6 | 655 | 5 | 652 | 0.0 | 810 |
Msa0754480 | MtrunA17_Chr1g0162621 | 56.836 | 651 | 279 | 2 | 6 | 655 | 5 | 654 | 0.0 | 794 |
Msa0754480 | MtrunA17_Chr1g0194371 | 51.286 | 661 | 319 | 2 | 4 | 661 | 2 | 662 | 0.0 | 693 |
Msa0754480 | MtrunA17_Chr7g0270221 | 49.224 | 644 | 288 | 1 | 4 | 647 | 2 | 606 | 0.0 | 635 |
Msa0754480 | MtrunA17_Chr1g0205711 | 40.562 | 641 | 361 | 10 | 27 | 659 | 61 | 689 | 8.33e-155 | 463 |
Msa0754480 | MtrunA17_Chr3g0120731 | 32.669 | 652 | 395 | 13 | 39 | 654 | 83 | 726 | 1.71e-98 | 318 |
Msa0754480 | MtrunA17_Chr1g0160041 | 32.229 | 664 | 394 | 16 | 36 | 656 | 46 | 696 | 3.16e-95 | 308 |
Msa0754480 | MtrunA17_Chr3g0124631 | 31.056 | 644 | 399 | 14 | 48 | 654 | 61 | 696 | 1.28e-93 | 304 |
Msa0754480 | MtrunA17_Chr3g0121931 | 27.463 | 670 | 394 | 23 | 48 | 655 | 81 | 720 | 6.16e-48 | 179 |
Msa0754480 | MtrunA17_Chr8g0377991 | 25.943 | 663 | 415 | 17 | 48 | 655 | 83 | 724 | 1.41e-43 | 167 |
Msa0754480 | MtrunA17_Chr3g0121951 | 26.727 | 666 | 401 | 24 | 48 | 655 | 79 | 715 | 1.61e-42 | 164 |
Msa0754480 | MtrunA17_Chr1g0180541 | 25.348 | 359 | 201 | 14 | 193 | 537 | 158 | 463 | 1.21e-23 | 105 |
Msa0754480 | MtrunA17_Chr5g0395431 | 27.696 | 473 | 238 | 19 | 77 | 523 | 95 | 489 | 3.62e-23 | 104 |
Msa0754480 | MtrunA17_Chr2g0327341 | 28.814 | 354 | 177 | 16 | 199 | 537 | 161 | 454 | 3.37e-21 | 97.8 |
Msa0754480 | MtrunA17_Chr4g0039791 | 25.163 | 461 | 271 | 14 | 87 | 537 | 80 | 476 | 3.98e-21 | 97.8 |
Msa0754480 | MtrunA17_Chr1g0180551 | 24.310 | 580 | 342 | 25 | 68 | 631 | 116 | 614 | 9.79e-21 | 96.7 |
Msa0754480 | MtrunA17_Chr6g0471921 | 23.851 | 457 | 272 | 14 | 74 | 522 | 28 | 416 | 4.29e-20 | 94.4 |
Msa0754480 | MtrunA17_Chr4g0028411 | 24.945 | 453 | 247 | 17 | 109 | 537 | 74 | 457 | 5.83e-20 | 94.0 |
Msa0754480 | MtrunA17_Chr5g0409771 | 26.329 | 395 | 219 | 15 | 179 | 551 | 140 | 484 | 3.39e-18 | 88.6 |
Msa0754480 | MtrunA17_Chr3g0102411 | 26.257 | 358 | 205 | 14 | 201 | 549 | 161 | 468 | 2.25e-17 | 85.9 |
Msa0754480 | MtrunA17_Chr5g0409791 | 24.682 | 393 | 212 | 11 | 179 | 537 | 141 | 483 | 3.67e-17 | 85.1 |
Msa0754480 | MtrunA17_Chr4g0000461 | 23.485 | 528 | 309 | 19 | 36 | 547 | 21 | 469 | 6.79e-17 | 84.3 |
Msa0754480 | MtrunA17_Chr3g0116271 | 27.796 | 313 | 169 | 12 | 218 | 522 | 196 | 459 | 2.98e-16 | 82.4 |
Msa0754480 | MtrunA17_Chr4g0072561 | 24.436 | 532 | 291 | 25 | 27 | 535 | 18 | 461 | 2.99e-16 | 82.4 |
Msa0754480 | MtrunA17_Chr8g0388091 | 61.538 | 52 | 19 | 1 | 1 | 51 | 1 | 52 | 1.04e-15 | 73.9 |
Msa0754480 | MtrunA17_Chr3g0116251 | 25.260 | 384 | 221 | 15 | 151 | 522 | 128 | 457 | 1.40e-15 | 80.1 |
Msa0754480 | MtrunA17_Chr8g0370731 | 26.842 | 380 | 179 | 17 | 200 | 549 | 114 | 424 | 3.87e-15 | 78.6 |
Msa0754480 | MtrunA17_Chr1g0157401 | 22.727 | 308 | 183 | 9 | 221 | 522 | 203 | 461 | 1.60e-13 | 73.6 |
Msa0754480 | MtrunA17_Chr3g0109731 | 21.111 | 540 | 300 | 19 | 64 | 564 | 28 | 480 | 2.66e-13 | 73.2 |
Msa0754480 | MtrunA17_Chr5g0406681 | 22.745 | 510 | 296 | 20 | 68 | 551 | 60 | 497 | 3.50e-13 | 72.8 |
Msa0754480 | MtrunA17_Chr5g0396331 | 22.008 | 518 | 299 | 19 | 80 | 574 | 41 | 476 | 4.67e-13 | 72.4 |
Msa0754480 | MtrunA17_Chr1g0186071 | 33.766 | 154 | 97 | 5 | 386 | 537 | 321 | 471 | 7.08e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754480 | AT4G23850.1 | 75.762 | 656 | 159 | 0 | 3 | 658 | 4 | 659 | 0.0 | 1069 |
Msa0754480 | AT4G11030.1 | 75.267 | 655 | 162 | 0 | 2 | 656 | 3 | 657 | 0.0 | 1060 |
Msa0754480 | AT1G64400.1 | 73.018 | 656 | 176 | 1 | 1 | 655 | 1 | 656 | 0.0 | 1021 |
Msa0754480 | AT1G49430.1 | 53.647 | 658 | 303 | 2 | 7 | 662 | 8 | 665 | 0.0 | 762 |
Msa0754480 | AT2G47240.1 | 48.466 | 652 | 336 | 0 | 4 | 655 | 2 | 653 | 0.0 | 667 |
Msa0754480 | AT2G47240.2 | 48.466 | 652 | 336 | 0 | 4 | 655 | 2 | 653 | 0.0 | 667 |
Msa0754480 | AT2G47240.3 | 48.466 | 652 | 336 | 0 | 4 | 655 | 2 | 653 | 0.0 | 667 |
Msa0754480 | AT2G47240.4 | 49.327 | 594 | 301 | 0 | 62 | 655 | 1 | 594 | 0.0 | 617 |
Msa0754480 | AT1G49430.2 | 50.909 | 495 | 242 | 1 | 7 | 500 | 8 | 502 | 0.0 | 551 |
Msa0754480 | AT5G27600.1 | 40.843 | 617 | 352 | 7 | 41 | 654 | 81 | 687 | 8.42e-156 | 466 |
Msa0754480 | AT3G05970.1 | 41.519 | 619 | 347 | 8 | 41 | 655 | 81 | 688 | 3.09e-151 | 454 |
Msa0754480 | AT2G04350.2 | 32.515 | 652 | 396 | 13 | 39 | 654 | 76 | 719 | 4.35e-105 | 335 |
Msa0754480 | AT2G04350.1 | 32.515 | 652 | 396 | 13 | 39 | 654 | 76 | 719 | 4.35e-105 | 335 |
Msa0754480 | AT1G77590.1 | 32.087 | 642 | 388 | 14 | 48 | 654 | 62 | 690 | 3.18e-96 | 311 |
Msa0754480 | AT1G77590.2 | 33.874 | 555 | 333 | 12 | 121 | 654 | 3 | 544 | 3.51e-87 | 283 |
Msa0754480 | AT3G23790.1 | 26.837 | 667 | 400 | 25 | 48 | 655 | 85 | 722 | 2.01e-44 | 170 |
Msa0754480 | AT4G14070.1 | 26.387 | 667 | 390 | 26 | 48 | 654 | 101 | 726 | 2.31e-40 | 158 |
Msa0754480 | AT4G19010.1 | 30.061 | 326 | 176 | 11 | 217 | 537 | 199 | 477 | 5.64e-22 | 100 |
Msa0754480 | AT2G47245.1 | 48.684 | 76 | 39 | 0 | 22 | 97 | 53 | 128 | 1.71e-19 | 85.5 |
Msa0754480 | AT3G16170.1 | 24.125 | 514 | 304 | 17 | 99 | 592 | 124 | 571 | 3.42e-19 | 92.4 |
Msa0754480 | AT3G21230.1 | 27.966 | 354 | 202 | 12 | 201 | 549 | 190 | 495 | 7.33e-19 | 91.3 |
Msa0754480 | AT3G21230.2 | 27.966 | 354 | 202 | 12 | 201 | 549 | 190 | 495 | 8.40e-19 | 90.5 |
Msa0754480 | AT3G21230.3 | 27.966 | 354 | 202 | 12 | 201 | 549 | 190 | 495 | 9.24e-19 | 90.9 |
Msa0754480 | AT4G05160.1 | 27.378 | 347 | 191 | 14 | 199 | 537 | 166 | 459 | 1.77e-18 | 89.7 |
Msa0754480 | AT1G66120.1 | 23.782 | 513 | 289 | 18 | 80 | 564 | 41 | 479 | 2.06e-18 | 89.7 |
Msa0754480 | AT3G21240.2 | 28.125 | 352 | 181 | 15 | 202 | 537 | 174 | 469 | 8.26e-18 | 87.4 |
Msa0754480 | AT3G21240.3 | 28.125 | 352 | 181 | 15 | 202 | 537 | 174 | 469 | 8.26e-18 | 87.4 |
Msa0754480 | AT3G21240.1 | 28.125 | 352 | 181 | 15 | 202 | 537 | 174 | 469 | 8.91e-18 | 87.8 |
Msa0754480 | AT1G65060.1 | 24.335 | 489 | 259 | 18 | 77 | 537 | 74 | 479 | 9.79e-18 | 87.4 |
Msa0754480 | AT1G65060.2 | 24.211 | 475 | 250 | 17 | 77 | 523 | 74 | 466 | 2.72e-17 | 85.9 |
Msa0754480 | AT3G16910.1 | 22.017 | 595 | 348 | 20 | 73 | 623 | 43 | 565 | 6.78e-17 | 84.7 |
Msa0754480 | AT1G65890.1 | 24.000 | 525 | 288 | 18 | 73 | 565 | 35 | 480 | 7.44e-17 | 84.7 |
Msa0754480 | AT1G20500.1 | 26.367 | 311 | 165 | 13 | 221 | 522 | 196 | 451 | 1.06e-14 | 77.8 |
Msa0754480 | AT1G51680.1 | 27.841 | 352 | 177 | 14 | 223 | 556 | 203 | 495 | 3.39e-14 | 76.3 |
Msa0754480 | AT1G51680.3 | 27.841 | 352 | 177 | 14 | 223 | 556 | 203 | 495 | 3.71e-14 | 76.3 |
Msa0754480 | AT1G51680.2 | 28.701 | 331 | 159 | 14 | 223 | 535 | 203 | 474 | 4.71e-14 | 75.5 |
Msa0754480 | AT1G20510.1 | 25.455 | 330 | 184 | 12 | 218 | 537 | 182 | 459 | 1.60e-13 | 73.9 |
Msa0754480 | AT1G20510.2 | 25.455 | 330 | 184 | 12 | 218 | 537 | 182 | 459 | 2.59e-13 | 73.2 |
Msa0754480 | AT1G20510.3 | 25.397 | 315 | 174 | 12 | 218 | 522 | 182 | 445 | 7.64e-13 | 71.6 |
Msa0754480 | AT1G62940.1 | 23.917 | 531 | 307 | 21 | 36 | 549 | 17 | 467 | 3.34e-11 | 66.6 |
Find 216 sgRNAs with CRISPR-Local
Find 673 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACCAAGCATAGGATTATT+TGG | 0.183204 | 5_2:+8046636 | None:intergenic |
ACACTTACTCTTGAGATATT+TGG | 0.186822 | 5_2:+8042686 | None:intergenic |
ATGCAGTTAACGGTGGTTTA+AGG | 0.205457 | 5_2:+8047597 | None:intergenic |
ATTCTCTCTGTGGAGATTCT+AGG | 0.235210 | 5_2:-8039096 | Msa0754480:CDS |
AAGCAAGAAGTTGAAAAGTT+TGG | 0.248242 | 5_2:-8042556 | Msa0754480:CDS |
TGACCCAGTTCCATTTGATA+TGG | 0.272583 | 5_2:-8038543 | Msa0754480:CDS |
TTCCTGGTCTTGATAGTTGC+TGG | 0.272872 | 5_2:-8047371 | Msa0754480:CDS |
GTTCATTTATTATTTCCTTT+TGG | 0.286679 | 5_2:-8037645 | Msa0754480:three_prime_UTR |
TTGAGATATTTGGTTGCATT+TGG | 0.288948 | 5_2:+8042696 | None:intergenic |
ATGTTCAAGTGCTGGTTTGC+TGG | 0.291698 | 5_2:+8039153 | None:intergenic |
TATTAGGTGAAACAAGGTTT+AGG | 0.296760 | 5_2:-8040751 | Msa0754480:intron |
TTGACACAGAAAATTTCTTC+TGG | 0.306587 | 5_2:-8041174 | Msa0754480:CDS |
AGGGCATCGTAACCCATTTC+AGG | 0.320553 | 5_2:+8040183 | None:intergenic |
CTCCTCTTGGTGTGCTTGCA+AGG | 0.324542 | 5_2:+8040163 | None:intergenic |
CATAATCCACTCTGCAGAAT+TGG | 0.331511 | 5_2:+8045859 | None:intergenic |
GCTTGAATATATTCTTCTTC+CGG | 0.342080 | 5_2:+8039895 | None:intergenic |
TTCACACAAATTTCTCCTCT+TGG | 0.342486 | 5_2:+8040150 | None:intergenic |
GTTTAAGGGAAAGGGAATAT+TGG | 0.343337 | 5_2:+8047612 | None:intergenic |
CCAAGCATATCTAGTTCATT+TGG | 0.343611 | 5_2:+8040255 | None:intergenic |
TTGGATTGGCAATATATTCA+TGG | 0.344016 | 5_2:-8042537 | Msa0754480:CDS |
ATATGGCATGGTGGTTCAAT+AGG | 0.345107 | 5_2:-8041615 | Msa0754480:CDS |
TGCAGTTAACGGTGGTTTAA+GGG | 0.345817 | 5_2:+8047598 | None:intergenic |
ATTAGGTGAAACAAGGTTTA+GGG | 0.346674 | 5_2:-8040750 | Msa0754480:intron |
CTGTCTCAGATATGGGTTTA+CGG | 0.347047 | 5_2:-8039214 | Msa0754480:intron |
TAAAATATTATTCCATTCCT+TGG | 0.357025 | 5_2:-8037483 | Msa0754480:three_prime_UTR |
ATAATCTTCATACTTCCATT+AGG | 0.361330 | 5_2:+8039921 | None:intergenic |
ATGGGATATAATAAATTCTA+TGG | 0.363050 | 5_2:+8042898 | None:intergenic |
CTCTCGCACACATCTTTGAT+AGG | 0.368081 | 5_2:-8041656 | Msa0754480:CDS |
GAACATTGGGCAGAAGAAAA+TGG | 0.369465 | 5_2:-8039136 | Msa0754480:CDS |
CCTGGAATCTGTTCCTGAAA+TGG | 0.379308 | 5_2:-8040196 | Msa0754480:CDS |
GTGCCCCGGGGCACTGGTTA+AGG | 0.379308 | 5_2:+8047758 | None:intergenic |
ACGAAAGAGGTTCTGGTTGA+TGG | 0.381839 | 5_2:-8040084 | Msa0754480:CDS |
GCTCATGTCATACAAGGATA+TGG | 0.382316 | 5_2:-8040649 | Msa0754480:intron |
TCTATCCGCAGCTGTGGTTA+TGG | 0.382635 | 5_2:-8046410 | Msa0754480:CDS |
GTTCAATAGGCTTCTGGCGT+GGG | 0.383925 | 5_2:-8041602 | Msa0754480:CDS |
TTGGATATCAATACTCCCTT+GGG | 0.390960 | 5_2:+8041978 | None:intergenic |
AGTTGAATAATGTCTTCTTC+AGG | 0.393797 | 5_2:+8041145 | None:intergenic |
GGTGTAAAATGTGGTATTTA+TGG | 0.394524 | 5_2:-8045884 | Msa0754480:CDS |
CCATTTCAGGAACAGATTCC+AGG | 0.395196 | 5_2:+8040196 | None:intergenic |
GGACCTCACGAAAGAGGTTC+TGG | 0.395230 | 5_2:-8040091 | Msa0754480:CDS |
GCATGTGGAAAGTTACTTAC+GGG | 0.401281 | 5_2:-8040683 | Msa0754480:CDS |
ATACCTAAGGTATCATATAA+AGG | 0.402549 | 5_2:+8043892 | None:intergenic |
CCGTGCCTGAGAAATGCTTT+TGG | 0.403835 | 5_2:-8037725 | Msa0754480:exon |
GGCCTCTTCTTCTTATATGT+TGG | 0.405195 | 5_2:+8038503 | None:intergenic |
AATTATTAATTGAAGATCTC+GGG | 0.407840 | 5_2:-8041421 | Msa0754480:CDS |
TCTGCCCAATGTTCAAGTGC+TGG | 0.409379 | 5_2:+8039145 | None:intergenic |
TGTTCAAGTGCTGGTTTGCT+GGG | 0.410438 | 5_2:+8039154 | None:intergenic |
AGCTGGGGTGAAGCGGCTAT+TGG | 0.411629 | 5_2:-8041934 | Msa0754480:CDS |
TCTTATATGTTGGAGTGATA+AGG | 0.414078 | 5_2:+8038513 | None:intergenic |
CTTGACGAGCTCTCAAAGAT+TGG | 0.417041 | 5_2:-8039058 | Msa0754480:CDS |
TATACAGCAATTGTGAGCTT+CGG | 0.424153 | 5_2:-8042598 | Msa0754480:intron |
TCCTCTTGAAGGTTTATCTT+CGG | 0.424838 | 5_2:+8047440 | None:intergenic |
TCAGTTGCTGAAATACTATC+AGG | 0.425338 | 5_2:-8038480 | Msa0754480:intron |
GTTCCTTTATATGATACCTT+AGG | 0.425559 | 5_2:-8043895 | Msa0754480:intron |
AACGTGCTCAGCGTAATTGC+TGG | 0.425885 | 5_2:+8047696 | None:intergenic |
TCCTCTTGGTGTGCTTGCAA+GGG | 0.426219 | 5_2:+8040164 | None:intergenic |
CGTTCCATATCAAATGGAAC+TGG | 0.427600 | 5_2:+8038539 | None:intergenic |
CAAAAGCATTTCTCAGGCAC+GGG | 0.429326 | 5_2:+8037726 | None:intergenic |
GAGGGTAATAATACTCTCAT+TGG | 0.431912 | 5_2:+8041959 | None:intergenic |
TCCAGGCACGCATCCACATT+TGG | 0.432219 | 5_2:+8040213 | None:intergenic |
AGTATTATTACCCTCTTAGC+TGG | 0.433434 | 5_2:-8041951 | Msa0754480:CDS |
AAATTATTAATTGAAGATCT+CGG | 0.439867 | 5_2:-8041422 | Msa0754480:CDS |
GCAAACCAGCACTTGAACAT+TGG | 0.440808 | 5_2:-8039150 | Msa0754480:CDS |
ATTGGAGAGTGGCAACCTAA+TGG | 0.442586 | 5_2:-8039936 | Msa0754480:CDS |
CGATACGCAGGTCCTCTTGA+AGG | 0.448610 | 5_2:+8047429 | None:intergenic |
TCATTGAGGAGACATTTATA+TGG | 0.450467 | 5_2:-8041632 | Msa0754480:CDS |
GAAAACATCAATAACCTGTA+TGG | 0.451975 | 5_2:+8040055 | None:intergenic |
ATGGTGGTTCAATAGGCTTC+TGG | 0.452304 | 5_2:-8041608 | Msa0754480:CDS |
CTGGAATCTGTTCCTGAAAT+GGG | 0.452978 | 5_2:-8040195 | Msa0754480:CDS |
ATTGGATATCAATACTCCCT+TGG | 0.463258 | 5_2:+8041977 | None:intergenic |
TGGTCCTTAACCAGTGCCCC+GGG | 0.463367 | 5_2:-8047762 | Msa0754480:five_prime_UTR |
TCCTGGTCTTGATAGTTGCT+GGG | 0.464933 | 5_2:-8047370 | Msa0754480:CDS |
AGAAGTTGAAAAGTTTGGAT+TGG | 0.465697 | 5_2:-8042551 | Msa0754480:CDS |
AGGTCCCGTTCCATATCAAA+TGG | 0.466313 | 5_2:+8038533 | None:intergenic |
ACCAAATGTGGATGCGTGCC+TGG | 0.469468 | 5_2:-8040214 | Msa0754480:CDS |
CAAACCAGCACTTGAACATT+GGG | 0.469596 | 5_2:-8039149 | Msa0754480:CDS |
TGACAAAGTTGTGTTCGATA+AGG | 0.474319 | 5_2:-8040861 | Msa0754480:intron |
CAACTATCAAGACCAGGAAT+AGG | 0.474804 | 5_2:+8047375 | None:intergenic |
GTATCTTTCACAGTTGAGTA+AGG | 0.477553 | 5_2:+8037578 | None:intergenic |
AGTTCCATTTGATATGGAAC+GGG | 0.480226 | 5_2:-8038537 | Msa0754480:CDS |
GGTTCAATAGGCTTCTGGCG+TGG | 0.482242 | 5_2:-8041603 | Msa0754480:CDS |
TGCATGTGGAAAGTTACTTA+CGG | 0.482991 | 5_2:-8040684 | Msa0754480:CDS |
CTTGGCTATAAATATTCTCC+AGG | 0.484171 | 5_2:+8039841 | None:intergenic |
ACATATATGACTTAGGTTCT+GGG | 0.485223 | 5_2:-8042922 | Msa0754480:intron |
GAGACTTTAAATGCAGTTAA+CGG | 0.486831 | 5_2:+8047587 | None:intergenic |
GCCGCTTCACCCCAGCTAAG+AGG | 0.487102 | 5_2:+8041940 | None:intergenic |
GTATTATTACCCTCTTAGCT+GGG | 0.491738 | 5_2:-8041950 | Msa0754480:CDS |
GTTGATGGATGGTTCCATAC+AGG | 0.491965 | 5_2:-8040069 | Msa0754480:intron |
ATATGTTGCCGTTGAAAACC+TGG | 0.492865 | 5_2:-8039859 | Msa0754480:CDS |
ATGGTCCTTAACCAGTGCCC+CGG | 0.493786 | 5_2:-8047763 | Msa0754480:five_prime_UTR |
CCTTCCCGTCCACAATCTCT+CGG | 0.494448 | 5_2:+8046613 | None:intergenic |
CAGATTCAACAGAAGTAACT+TGG | 0.496861 | 5_2:+8039823 | None:intergenic |
TATCCAAATAATCCTATGCT+TGG | 0.499485 | 5_2:-8046639 | Msa0754480:CDS |
ATGTATACTAGCGGAACTAC+TGG | 0.501317 | 5_2:-8042005 | Msa0754480:CDS |
TTCTCTCTGTGGAGATTCTA+GGG | 0.505172 | 5_2:-8039095 | Msa0754480:CDS |
ATCGATGACATGTACAAAAG+TGG | 0.505651 | 5_2:-8037757 | Msa0754480:CDS |
CAAATGGAACTGGGTCAAGA+TGG | 0.505692 | 5_2:+8038549 | None:intergenic |
CAACTCCAAAAGCATTTCTC+AGG | 0.505925 | 5_2:+8037720 | None:intergenic |
ATGGAGTGAGCCAGAGTGTA+GGG | 0.511938 | 5_2:+8047654 | None:intergenic |
GTTTATTCAACAGGGGACAT+TGG | 0.514474 | 5_2:-8039954 | Msa0754480:intron |
TGAGACAAAGGTTCCCGCAC+AGG | 0.520727 | 5_2:+8040281 | None:intergenic |
CAAAGATGTGTGCGAGAGGA+AGG | 0.521267 | 5_2:+8041661 | None:intergenic |
AGTTTGTGCAATAAGTGCAT+TGG | 0.522497 | 5_2:+8047806 | None:intergenic |
CCAAATGAACTAGATATGCT+TGG | 0.522719 | 5_2:-8040255 | Msa0754480:CDS |
CATCTTTGATAGGGTCATTG+AGG | 0.523014 | 5_2:-8041646 | Msa0754480:CDS |
TAACTAGTGCCCCGGGGCAC+TGG | 0.523782 | 5_2:+8047752 | None:intergenic |
CCCTCTTAGCTGGGGTGAAG+CGG | 0.526428 | 5_2:-8041941 | Msa0754480:CDS |
CTCCAACATATAAGAAGAAG+AGG | 0.526676 | 5_2:-8038505 | Msa0754480:CDS |
AAAGATTGGAAAGGAAAAGA+AGG | 0.529034 | 5_2:-8039044 | Msa0754480:intron |
TTAACGGTGGTTTAAGGGAA+AGG | 0.529583 | 5_2:+8047603 | None:intergenic |
TTCTTTACAGTTGACTGAGA+AGG | 0.529680 | 5_2:-8041700 | Msa0754480:intron |
AACACAACTTTGTCAAGAAG+TGG | 0.532570 | 5_2:+8040869 | None:intergenic |
TTGCAGGCTTGCAATGCTCA+TGG | 0.535649 | 5_2:-8043928 | Msa0754480:intron |
CCGCTTCACCCCAGCTAAGA+GGG | 0.536761 | 5_2:+8041941 | None:intergenic |
ATGTACAGACAGTAACCAAA+AGG | 0.537206 | 5_2:+8037630 | None:intergenic |
GCTTGGTAACCGAGAGATTG+TGG | 0.540364 | 5_2:-8046622 | Msa0754480:CDS |
TAACGGTGGTTTAAGGGAAA+GGG | 0.545439 | 5_2:+8047604 | None:intergenic |
GGTACCGCACAGAAAATAGT+TGG | 0.545593 | 5_2:+8041389 | None:intergenic |
GGAAATGTTAACTAGTGCCC+CGG | 0.546224 | 5_2:+8047744 | None:intergenic |
TTCATTTGGTAATGAGACAA+AGG | 0.547604 | 5_2:+8040269 | None:intergenic |
CCAAAAGCATTTCTCAGGCA+CGG | 0.549321 | 5_2:+8037725 | None:intergenic |
CAGTTCCATTTGATATGGAA+CGG | 0.552406 | 5_2:-8038538 | Msa0754480:CDS |
AAGTTTGTAACGAATATTGT+CGG | 0.552538 | 5_2:+8037518 | None:intergenic |
AAGTTGAATAACATGAAGAA+AGG | 0.555049 | 5_2:-8040914 | Msa0754480:CDS |
GAAGTATGAAGATTATTGAC+CGG | 0.555526 | 5_2:-8039914 | Msa0754480:CDS |
TGCAGAGTGGATTATGAGCA+TGG | 0.556427 | 5_2:-8045852 | Msa0754480:CDS |
TCTCGCACACATCTTTGATA+GGG | 0.557834 | 5_2:-8041655 | Msa0754480:CDS |
AAGAGGTTCTGGTTGATGGA+TGG | 0.558942 | 5_2:-8040080 | Msa0754480:CDS |
CTAGATATGCTTGGAACAGT+GGG | 0.559533 | 5_2:-8040246 | Msa0754480:CDS |
CTTTCCACATGCAAGGATAG+AGG | 0.562273 | 5_2:+8040694 | None:intergenic |
ATCGATCGATTGTTGAGCCA+TGG | 0.563624 | 5_2:-8047508 | Msa0754480:exon |
AGAGGAGAAATTTGTGTGAA+GGG | 0.564584 | 5_2:-8040147 | Msa0754480:CDS |
GAAATGTTAACTAGTGCCCC+GGG | 0.565944 | 5_2:+8047745 | None:intergenic |
TCAAGACCAGGAATAGGAGA+TGG | 0.566458 | 5_2:+8047381 | None:intergenic |
ACACAGAAAATTTCTTCTGG+AGG | 0.567816 | 5_2:-8041171 | Msa0754480:CDS |
GTGAGCCAGAGTGTAGGGTA+GGG | 0.568991 | 5_2:+8047659 | None:intergenic |
TACATATGATTATGAAGAGA+CGG | 0.570345 | 5_2:-8037612 | Msa0754480:three_prime_UTR |
AGTGAGCCAGAGTGTAGGGT+AGG | 0.572131 | 5_2:+8047658 | None:intergenic |
GAGGAGACATTTATATGGCA+TGG | 0.573299 | 5_2:-8041627 | Msa0754480:CDS |
AAGAGGAGAAATTTGTGTGA+AGG | 0.574495 | 5_2:-8040148 | Msa0754480:CDS |
CGGAACTACTGGTGACCCCA+AGG | 0.575566 | 5_2:-8041994 | Msa0754480:CDS |
TTCCTTGGCAAAATTAACAA+TGG | 0.576627 | 5_2:-8037468 | Msa0754480:three_prime_UTR |
CACGCATCCACATTTGGTAC+AGG | 0.577541 | 5_2:+8040219 | None:intergenic |
TATGACATGGTGATCAAAGT+CGG | 0.580833 | 5_2:-8046437 | Msa0754480:CDS |
ACGTGAGGACCTCACGAAAG+AGG | 0.584822 | 5_2:-8040097 | Msa0754480:CDS |
GATGGAGTGAGCCAGAGTGT+AGG | 0.586255 | 5_2:+8047653 | None:intergenic |
TGCAATTGAGACCTCTGCAT+GGG | 0.590133 | 5_2:+8042880 | None:intergenic |
GGATATGTTTGACAGTTGAA+AGG | 0.594993 | 5_2:-8038593 | Msa0754480:intron |
AACAGCATGGCAAGTACAAG+TGG | 0.596150 | 5_2:-8046478 | Msa0754480:intron |
ACTAGATATGCTTGGAACAG+TGG | 0.597796 | 5_2:-8040247 | Msa0754480:CDS |
AGGAAATAATAAATGAACAA+AGG | 0.599532 | 5_2:+8037650 | None:intergenic |
ACTTGTGCTCATGTCATACA+AGG | 0.602081 | 5_2:-8040655 | Msa0754480:CDS |
TAAGTAACTTTCCACATGCA+AGG | 0.606789 | 5_2:+8040687 | None:intergenic |
CATATATGACTTAGGTTCTG+GGG | 0.607084 | 5_2:-8042921 | Msa0754480:intron |
AGCAATTGTGAGCTTCGGAA+AGG | 0.607509 | 5_2:-8042593 | Msa0754480:CDS |
ATTATTAATTGAAGATCTCG+GGG | 0.613894 | 5_2:-8041420 | Msa0754480:CDS |
ACCGAAGATAAACCTTCAAG+AGG | 0.614180 | 5_2:-8047441 | Msa0754480:CDS |
GTTCAAGTGCTGGTTTGCTG+GGG | 0.614592 | 5_2:+8039155 | None:intergenic |
TTCAATAGGCTTCTGGCGTG+GGG | 0.616697 | 5_2:-8041601 | Msa0754480:intron |
TAGGTGAAACAAGGTTTAGG+GGG | 0.618879 | 5_2:-8040748 | Msa0754480:CDS |
GGGTCCTCCTGTACCAAATG+TGG | 0.620020 | 5_2:-8040226 | Msa0754480:CDS |
ATGCAATTGAGACCTCTGCA+TGG | 0.620150 | 5_2:+8042879 | None:intergenic |
TTAGGTGAAACAAGGTTTAG+GGG | 0.621786 | 5_2:-8040749 | Msa0754480:intron |
CGAGCTCTCAAAGATTGGAA+AGG | 0.621868 | 5_2:-8039053 | Msa0754480:CDS |
CCGAGAGATTGTGGACGGGA+AGG | 0.622746 | 5_2:-8046613 | Msa0754480:intron |
GTTAACAACAGCAACAAGGA+AGG | 0.622901 | 5_2:+8039177 | None:intergenic |
AATATATTCAAGCTTTCACA+AGG | 0.623679 | 5_2:-8039885 | Msa0754480:CDS |
GGTCTGACTGAAACCTGTGC+GGG | 0.625404 | 5_2:-8040294 | Msa0754480:CDS |
GGTAACCGAGAGATTGTGGA+CGG | 0.625804 | 5_2:-8046618 | Msa0754480:CDS |
ATTATTTGGATATTTCTCAA+CGG | 0.628492 | 5_2:+8046650 | None:intergenic |
GCGAAGATGCTACGATACGC+AGG | 0.628778 | 5_2:+8047417 | None:intergenic |
AGTACACTCTCTCAAGTACA+CGG | 0.629943 | 5_2:+8041366 | None:intergenic |
TATTATTACCCTCTTAGCTG+GGG | 0.630451 | 5_2:-8041949 | Msa0754480:CDS |
ATTTATTATATCCCATGCAG+AGG | 0.633133 | 5_2:-8042891 | Msa0754480:CDS |
ACAGAGAGAATTGAAGTCCA+CGG | 0.634161 | 5_2:+8039108 | None:intergenic |
GCCCTTGCAAGCACACCAAG+AGG | 0.634649 | 5_2:-8040165 | Msa0754480:CDS |
GGAAATTCTATCCGCAGCTG+TGG | 0.634848 | 5_2:-8046416 | Msa0754480:CDS |
GCAGAAAAGATTCATCATTG+AGG | 0.637953 | 5_2:-8047484 | Msa0754480:CDS |
TTTGTAGTACCCCGAAAACA+AGG | 0.639552 | 5_2:+8040119 | None:intergenic |
GCATCCACATTTGGTACAGG+AGG | 0.639658 | 5_2:+8040222 | None:intergenic |
GTACACTCTCTCAAGTACAC+GGG | 0.640845 | 5_2:+8041367 | None:intergenic |
CTATCAAAGATGTGTGCGAG+AGG | 0.643677 | 5_2:+8041657 | None:intergenic |
AGCACCTCTATCCTTGCATG+TGG | 0.644253 | 5_2:-8040698 | Msa0754480:CDS |
TGATAGTATTTCAGCAACTG+AGG | 0.648487 | 5_2:+8038482 | None:intergenic |
GGAACTACTGGTGACCCCAA+GGG | 0.650731 | 5_2:-8041993 | Msa0754480:CDS |
ACTTTAAATGCAGTTAACGG+TGG | 0.652905 | 5_2:+8047590 | None:intergenic |
TCCCAGCAACTATCAAGACC+AGG | 0.653688 | 5_2:+8047369 | None:intergenic |
GTGGACTTCAATTCTCTCTG+TGG | 0.654530 | 5_2:-8039106 | Msa0754480:CDS |
AAAAGCATTTCTCAGGCACG+GGG | 0.655886 | 5_2:+8037727 | None:intergenic |
GTTCCATATCAAATGGAACT+GGG | 0.656082 | 5_2:+8038540 | None:intergenic |
GAAGTGGACATGCTGCAGCA+TGG | 0.657031 | 5_2:+8040885 | None:intergenic |
ATGGTGCCAATTCTGCAGAG+TGG | 0.660085 | 5_2:-8045865 | Msa0754480:CDS |
AATAAATTATCTGCATGACA+TGG | 0.660661 | 5_2:+8037694 | None:intergenic |
TTTGTAACGAATATTGTCGG+AGG | 0.665964 | 5_2:+8037521 | None:intergenic |
CAACAGGGGACATTGGAGAG+TGG | 0.668033 | 5_2:-8039947 | Msa0754480:intron |
GTAACCGAGAGATTGTGGAC+GGG | 0.669413 | 5_2:-8046617 | Msa0754480:CDS |
AGGTCTGACTGAAACCTGTG+CGG | 0.671990 | 5_2:-8040295 | Msa0754480:CDS |
TGGGGTTAACAACAGCAACA+AGG | 0.674167 | 5_2:+8039173 | None:intergenic |
GTACTTGAGAGAGTGTACTC+AGG | 0.674223 | 5_2:-8041362 | Msa0754480:intron |
TTCGGGGTACTACAAACGTG+AGG | 0.679871 | 5_2:-8040112 | Msa0754480:CDS |
AGAAGAAAATGGTATATCCG+TGG | 0.681052 | 5_2:-8039125 | Msa0754480:CDS |
CAACCAGAACCTCTTTCGTG+AGG | 0.683486 | 5_2:+8040088 | None:intergenic |
TCATACCCTACCCTACACTC+TGG | 0.685393 | 5_2:-8047664 | Msa0754480:five_prime_UTR |
ATCTCTCGGTTACCAAGCAT+AGG | 0.692266 | 5_2:+8046627 | None:intergenic |
GAGACATTTATATGGCATGG+TGG | 0.693735 | 5_2:-8041624 | Msa0754480:CDS |
TGTACAATAATGTATACTAG+CGG | 0.700165 | 5_2:-8042014 | Msa0754480:CDS |
TACACTCTCTCAAGTACACG+GGG | 0.702319 | 5_2:+8041368 | None:intergenic |
CTTCTCCATAACCACAGCTG+CGG | 0.713750 | 5_2:+8046405 | None:intergenic |
TGGATATCAATACTCCCTTG+GGG | 0.718015 | 5_2:+8041979 | None:intergenic |
GGTTTGCAGGGTGTAAAATG+TGG | 0.719983 | 5_2:-8045893 | Msa0754480:intron |
TTACAAAGAAGTATATGACA+TGG | 0.723910 | 5_2:-8046450 | Msa0754480:CDS |
AGAAGAAAAGAAGATACCTG+AGG | 0.728782 | 5_2:-8042852 | Msa0754480:intron |
TGTGGAAAGTTACTTACGGG+TGG | 0.735294 | 5_2:-8040680 | Msa0754480:CDS |
GGTCCTTAACCAGTGCCCCG+GGG | 0.738651 | 5_2:-8047761 | Msa0754480:five_prime_UTR |
AAATGTTAACTAGTGCCCCG+GGG | 0.766320 | 5_2:+8047746 | None:intergenic |
AGAGTGGATTATGAGCATGG+AGG | 0.803600 | 5_2:-8045849 | Msa0754480:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAAATAATTATTACATG+CGG | + | chr5_2:8039295-8039314 | None:intergenic | 10.0% |
!! | TTTAAACAAATATTAAGAAA+TGG | + | chr5_2:8040139-8040158 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTCCTTTT+CGG | - | chr5_2:8041008-8041027 | Msa0754480:intron | 10.0% |
!! | ATTTCTTATTAATTTATTGT+TGG | - | chr5_2:8042434-8042453 | Msa0754480:intron | 10.0% |
!! | TTTCTTATTAATTTATTGTT+GGG | - | chr5_2:8042435-8042454 | Msa0754480:intron | 10.0% |
!!! | AAAGTTTTTAAAATAAAGAT+AGG | + | chr5_2:8042508-8042527 | None:intergenic | 10.0% |
!!! | TAGTTTTTATTTTCTTAATT+AGG | - | chr5_2:8044227-8044246 | Msa0754480:intron | 10.0% |
!! | TATATAGATACTATTTAAAT+TGG | - | chr5_2:8045222-8045241 | Msa0754480:intron | 10.0% |
!!! | AAATTAATGTGATATTTTAT+CGG | + | chr5_2:8046297-8046316 | None:intergenic | 10.0% |
!! | TAAAATATCACATTAATTTA+AGG | - | chr5_2:8046298-8046317 | Msa0754480:intron | 10.0% |
!! | AAAATATCACATTAATTTAA+GGG | - | chr5_2:8046299-8046318 | Msa0754480:intron | 10.0% |
!!! | TTATAAAAAGTTGCTATTTA+TGG | - | chr5_2:8037461-8037480 | Msa0754480:three_prime_UTR | 15.0% |
!!! | ACTTAAGCAAATTTTTTTTT+TGG | + | chr5_2:8039202-8039221 | None:intergenic | 15.0% |
!!! | ATTATTTTTCATGAAGTTTT+AGG | - | chr5_2:8040286-8040305 | Msa0754480:CDS | 15.0% |
!!! | ATAATTTTTTCACATATTCA+AGG | + | chr5_2:8040546-8040565 | None:intergenic | 15.0% |
!!! | TCTATTTTTTTAAGATACAA+GGG | - | chr5_2:8040620-8040639 | Msa0754480:intron | 15.0% |
!! | ATTGTTTAATTAAAAACTAG+AGG | - | chr5_2:8040648-8040667 | Msa0754480:intron | 15.0% |
!! | TTGTTTAATTAAAAACTAGA+GGG | - | chr5_2:8040649-8040668 | Msa0754480:intron | 15.0% |
!! | AAATATATTCAAATAATTGC+AGG | - | chr5_2:8041299-8041318 | Msa0754480:intron | 15.0% |
!!! | TATTGAATGAATCTAAAATT+TGG | + | chr5_2:8041591-8041610 | None:intergenic | 15.0% |
!!! | TTTTTTTTATAAAATCACGA+GGG | + | chr5_2:8041817-8041836 | None:intergenic | 15.0% |
!!! | TTTTTTTTTATAAAATCACG+AGG | + | chr5_2:8041818-8041837 | None:intergenic | 15.0% |
!! | CAATTCAAATAAGAAAAATA+AGG | - | chr5_2:8042969-8042988 | Msa0754480:intron | 15.0% |
!! | TATGAATTATAATTCAGTAA+CGG | + | chr5_2:8043689-8043708 | None:intergenic | 15.0% |
!!! | ATCAAAAAAAATTCCAATTT+TGG | + | chr5_2:8043755-8043774 | None:intergenic | 15.0% |
!! | AAATTATTAATTGAAGATCT+CGG | - | chr5_2:8043821-8043840 | Msa0754480:intron | 15.0% |
!!! | TATTTTAATTGCTGAATATA+TGG | - | chr5_2:8044715-8044734 | Msa0754480:intron | 15.0% |
!!! | GTATCTATATAGTTTAATTT+TGG | + | chr5_2:8045213-8045232 | None:intergenic | 15.0% |
!!! | TATTTTTTTCAACTTCATAT+GGG | + | chr5_2:8045503-8045522 | None:intergenic | 15.0% |
!!! | ATATTTTTTTCAACTTCATA+TGG | + | chr5_2:8045504-8045523 | None:intergenic | 15.0% |
!! | ATTAAAGAAACTTTCAATTA+CGG | - | chr5_2:8045573-8045592 | Msa0754480:intron | 15.0% |
!! | TTCATTATGATCAAATAAAT+AGG | - | chr5_2:8045857-8045876 | Msa0754480:CDS | 15.0% |
!! | AAATATCACATTAATTTAAG+GGG | - | chr5_2:8046300-8046319 | Msa0754480:intron | 15.0% |
!!! | ATTTTATATTACGTTGAAAA+GGG | + | chr5_2:8046387-8046406 | None:intergenic | 15.0% |
!!! | TATTTTATATTACGTTGAAA+AGG | + | chr5_2:8046388-8046407 | None:intergenic | 15.0% |
!!! | AATTATTTCTGCTTTATTAT+AGG | - | chr5_2:8046827-8046846 | Msa0754480:intron | 15.0% |
!!! | GATACTGTTGTTTTATTAAA+GGG | + | chr5_2:8037523-8037542 | None:intergenic | 20.0% |
!!! | AGATACTGTTGTTTTATTAA+AGG | + | chr5_2:8037524-8037543 | None:intergenic | 20.0% |
!! | TTGTAATAAATAGCTTATCA+TGG | - | chr5_2:8038438-8038457 | Msa0754480:intron | 20.0% |
!! | ATTATTTGGATATTTCTCAA+CGG | + | chr5_2:8038596-8038615 | None:intergenic | 20.0% |
!! | GTTCAAAGAAATTAAATAAG+AGG | + | chr5_2:8039076-8039095 | None:intergenic | 20.0% |
!! | CAAATTAATATCATGGAAAT+GGG | + | chr5_2:8039941-8039960 | None:intergenic | 20.0% |
!! | ACAAATTAATATCATGGAAA+TGG | + | chr5_2:8039942-8039961 | None:intergenic | 20.0% |
!!! | TTTCCATGATATTAATTTGT+AGG | - | chr5_2:8039942-8039961 | Msa0754480:CDS | 20.0% |
!!! | TTCCATGATATTAATTTGTA+GGG | - | chr5_2:8039943-8039962 | Msa0754480:CDS | 20.0% |
!! | AATCCATACATTTATCTATA+TGG | - | chr5_2:8040243-8040262 | Msa0754480:CDS | 20.0% |
!! | TTTCCATATAGATAAATGTA+TGG | + | chr5_2:8040249-8040268 | None:intergenic | 20.0% |
!! | ATTGTTTGCAAAAATAAAAG+TGG | + | chr5_2:8040484-8040503 | None:intergenic | 20.0% |
!!! | ACTTTTATTTTTGCAAACAA+TGG | - | chr5_2:8040483-8040502 | Msa0754480:intron | 20.0% |
!!! | GTCTATTTTTTTAAGATACA+AGG | - | chr5_2:8040619-8040638 | Msa0754480:intron | 20.0% |
!! | TGTTTAATTAAAAACTAGAG+GGG | - | chr5_2:8040650-8040669 | Msa0754480:CDS | 20.0% |
!! | ACATAGAAATAAATAAGAAC+AGG | + | chr5_2:8041041-8041060 | None:intergenic | 20.0% |
!!! | GTAAGTTTTTAAGCATAAAT+TGG | + | chr5_2:8041539-8041558 | None:intergenic | 20.0% |
!!! | TATTGAATGAATCTAAAACA+TGG | - | chr5_2:8041652-8041671 | Msa0754480:CDS | 20.0% |
!! | GGATAAAAACAAAAATATAC+CGG | + | chr5_2:8041796-8041815 | None:intergenic | 20.0% |
!!! | AGATAGTTTATCACAATTTT+AGG | + | chr5_2:8041933-8041952 | None:intergenic | 20.0% |
!!! | TTGATAATCAGTATTTTGTT+AGG | - | chr5_2:8042198-8042217 | Msa0754480:intron | 20.0% |
!!! | ATTAGAATGGCATTTATTTT+CGG | + | chr5_2:8042240-8042259 | None:intergenic | 20.0% |
!!! | TGAATATGAAAGTATTAGAA+TGG | + | chr5_2:8042253-8042272 | None:intergenic | 20.0% |
!! | TTTGAATTTCCAATTATCAT+TGG | - | chr5_2:8042283-8042302 | Msa0754480:intron | 20.0% |
!! | ATGGGATATAATAAATTCTA+TGG | + | chr5_2:8042348-8042367 | None:intergenic | 20.0% |
!! | TTATTAATTTATTGTTGGGA+AGG | - | chr5_2:8042439-8042458 | Msa0754480:intron | 20.0% |
!! | ATAAAAAACCAAATTAGGAA+TGG | + | chr5_2:8043150-8043169 | None:intergenic | 20.0% |
!! | CAAGTATAAAAAACCAAATT+AGG | + | chr5_2:8043155-8043174 | None:intergenic | 20.0% |
!!! | AATGAAAAGAAATTTTGCAT+AGG | + | chr5_2:8043400-8043419 | None:intergenic | 20.0% |
!!! | GGATTTAATTTTTTTTGTTC+AGG | - | chr5_2:8043457-8043476 | Msa0754480:intron | 20.0% |
!! | TGTAAAGAAAGAAAAAAAGA+GGG | + | chr5_2:8043532-8043551 | None:intergenic | 20.0% |
!! | AATTATTAATTGAAGATCTC+GGG | - | chr5_2:8043822-8043841 | Msa0754480:intron | 20.0% |
!! | TATCAAGAAATGATTTACAA+AGG | + | chr5_2:8043939-8043958 | None:intergenic | 20.0% |
!!! | GTAAATCATTTCTTGATAAT+TGG | - | chr5_2:8043941-8043960 | Msa0754480:intron | 20.0% |
!!! | TAATATAGTTTTTATCTAGC+TGG | + | chr5_2:8044024-8044043 | None:intergenic | 20.0% |
!! | TATATTAAGATTCTCAACTT+CGG | - | chr5_2:8044037-8044056 | Msa0754480:intron | 20.0% |
!! | AATTTCCTAATATCATATAG+AGG | + | chr5_2:8044163-8044182 | None:intergenic | 20.0% |
!!! | TTTGGTTTTGCAATTTTATT+AGG | - | chr5_2:8044476-8044495 | Msa0754480:intron | 20.0% |
!! | TTAAAATATGAAACTAGACT+TGG | + | chr5_2:8044703-8044722 | None:intergenic | 20.0% |
!!! | TTATATTCTTTTAAACTGCA+TGG | - | chr5_2:8045267-8045286 | Msa0754480:intron | 20.0% |
!!! | ATTTTTTTCAACTTCATATG+GGG | + | chr5_2:8045502-8045521 | None:intergenic | 20.0% |
!! | TGTTGTAAATTATACCAATA+CGG | + | chr5_2:8045817-8045836 | None:intergenic | 20.0% |
!!! | TTGTTCTAATTTGTTATGAA+TGG | - | chr5_2:8046248-8046267 | Msa0754480:intron | 20.0% |
!! | AATATCACATTAATTTAAGG+GGG | - | chr5_2:8046301-8046320 | Msa0754480:intron | 20.0% |
!!! | ACTAAAAGTATATGATTAGA+TGG | + | chr5_2:8046415-8046434 | None:intergenic | 20.0% |
!! | CAAGAAAATAAACTTTCTTA+TGG | + | chr5_2:8047163-8047182 | None:intergenic | 20.0% |
!!! | TTTTCTTGTATTTCATGTAT+AGG | - | chr5_2:8047175-8047194 | Msa0754480:intron | 20.0% |
!! | TAGTTGTATTCTAAGTAATT+TGG | - | chr5_2:8047251-8047270 | Msa0754480:intron | 20.0% |
!!! | TAAGTAATTTGGAATACTTA+AGG | - | chr5_2:8047262-8047281 | Msa0754480:intron | 20.0% |
!! | AGGAAATAATAAATGAACAA+AGG | + | chr5_2:8047596-8047615 | None:intergenic | 20.0% |
!!! | GTTCATTTATTATTTCCTTT+TGG | - | chr5_2:8047598-8047617 | Msa0754480:five_prime_UTR | 20.0% |
!! | TAAAATATTATTCCATTCCT+TGG | - | chr5_2:8047760-8047779 | Msa0754480:five_prime_UTR | 20.0% |
!! | GGAGAATGAGAAATTTTAAA+TGG | + | chr5_2:8037693-8037712 | None:intergenic | 25.0% |
! | AGAAAAATGGTTAAGTAAAG+CGG | + | chr5_2:8037714-8037733 | None:intergenic | 25.0% |
! | CATCGAAATTAAGATGAAAA+TGG | + | chr5_2:8037928-8037947 | None:intergenic | 25.0% |
!! | TTTTCATCTTAATTTCGATG+TGG | - | chr5_2:8037928-8037947 | Msa0754480:intron | 25.0% |
!! | TCGAATTTTCTTTCTAACAT+TGG | - | chr5_2:8038197-8038216 | Msa0754480:intron | 25.0% |
!!! | TTTAATTTTTCGCTCCATTT+TGG | - | chr5_2:8038279-8038298 | Msa0754480:intron | 25.0% |
! | TACAAAATCTTGTCAAATAG+CGG | + | chr5_2:8038423-8038442 | None:intergenic | 25.0% |
! | TAACAACACTAGCAAAAATT+TGG | - | chr5_2:8038508-8038527 | Msa0754480:CDS | 25.0% |
! | TAATACAATCAGAACTGAAA+CGG | + | chr5_2:8038556-8038575 | None:intergenic | 25.0% |
! | TATTATGAAACTTAACAGCA+TGG | - | chr5_2:8038752-8038771 | Msa0754480:intron | 25.0% |
!! | TTACAAAGAAGTATATGACA+TGG | - | chr5_2:8038793-8038812 | Msa0754480:intron | 25.0% |
!!! | ATGAAACCTTGTTTTGTTTT+TGG | - | chr5_2:8038895-8038914 | Msa0754480:intron | 25.0% |
! | AAATAGCCAAAAACAAAACA+AGG | + | chr5_2:8038904-8038923 | None:intergenic | 25.0% |
! | TTGTCTGATATTCAAATTCT+TGG | - | chr5_2:8038941-8038960 | Msa0754480:intron | 25.0% |
! | TGTCTGATATTCAAATTCTT+GGG | - | chr5_2:8038942-8038961 | Msa0754480:intron | 25.0% |
!! | ATTTTGAATTTCTTTCGTCT+TGG | - | chr5_2:8039425-8039444 | Msa0754480:intron | 25.0% |
!!! | AACTCTTAGAATACTTTTTG+GGG | + | chr5_2:8039724-8039743 | None:intergenic | 25.0% |
!!! | CAACTCTTAGAATACTTTTT+GGG | + | chr5_2:8039725-8039744 | None:intergenic | 25.0% |
!! | ACAACTCTTAGAATACTTTT+TGG | + | chr5_2:8039726-8039745 | None:intergenic | 25.0% |
!! | ACAACAATCAATTTCAGTTT+TGG | + | chr5_2:8039911-8039930 | None:intergenic | 25.0% |
!!! | TCCATGATATTAATTTGTAG+GGG | - | chr5_2:8039944-8039963 | Msa0754480:CDS | 25.0% |
!! | TGTTATTTACCCATACTTAA+GGG | + | chr5_2:8039986-8040005 | None:intergenic | 25.0% |
!!! | GTTGTTTTTTCAAAACTAGA+GGG | + | chr5_2:8040017-8040036 | None:intergenic | 25.0% |
!!! | TGTTGTTTTTTCAAAACTAG+AGG | + | chr5_2:8040018-8040037 | None:intergenic | 25.0% |
! | CTAAATTCTAAACTACCATT+TGG | - | chr5_2:8040413-8040432 | Msa0754480:intron | 25.0% |
!!! | ATTTTTTTAAGATACAAGGG+TGG | - | chr5_2:8040623-8040642 | Msa0754480:intron | 25.0% |
! | GTTTAATTAAAAACTAGAGG+GGG | - | chr5_2:8040651-8040670 | Msa0754480:CDS | 25.0% |
! | ATAGGATTAGGTAAATGAAA+AGG | + | chr5_2:8040873-8040892 | None:intergenic | 25.0% |
! | ATTTACCTAATCCTATTAAC+CGG | - | chr5_2:8040877-8040896 | Msa0754480:CDS | 25.0% |
! | AATGTATTGTATTAACGAGA+GGG | + | chr5_2:8040969-8040988 | None:intergenic | 25.0% |
! | AGTAAAGGAATATTATAGCA+AGG | + | chr5_2:8041247-8041266 | None:intergenic | 25.0% |
! | AAAACTTAATAACAATCGAG+TGG | + | chr5_2:8041278-8041297 | None:intergenic | 25.0% |
!! | ATACCTAAGGTATCATATAA+AGG | + | chr5_2:8041354-8041373 | None:intergenic | 25.0% |
!! | CTTTAACTGCAATTGAATTT+TGG | - | chr5_2:8041411-8041430 | Msa0754480:CDS | 25.0% |
!! | TTGCAACATTTTTGTCAATA+TGG | - | chr5_2:8041484-8041503 | Msa0754480:intron | 25.0% |
!! | TGCAACATTTTTGTCAATAT+GGG | - | chr5_2:8041485-8041504 | Msa0754480:intron | 25.0% |
!! | TTTTTGCTTATATTTGTGAC+CGG | + | chr5_2:8041676-8041695 | None:intergenic | 25.0% |
! | CATTCAATAAATGATGTATG+TGG | + | chr5_2:8041602-8041621 | None:intergenic | 25.0% |
!! | TTTTTGCTTATATTTGTGAC+CGG | - | chr5_2:8041676-8041695 | Msa0754480:CDS | 25.0% |
! | AGGAACTTTGTTAATAAAAC+AGG | + | chr5_2:8041709-8041728 | None:intergenic | 25.0% |
!!! | GTGTTTTTAGCATTTAATAC+TGG | - | chr5_2:8042166-8042185 | Msa0754480:intron | 25.0% |
! | TTCTACTCTTACTTGTAAAT+TGG | - | chr5_2:8042778-8042797 | Msa0754480:intron | 25.0% |
! | CAATGCCAATTAATTATACA+AGG | + | chr5_2:8042818-8042837 | None:intergenic | 25.0% |
! | AGAAAAATAAGGATGATATC+AGG | - | chr5_2:8042980-8042999 | Msa0754480:intron | 25.0% |
!! | ATTGTTTGAATAGTTGACTT+GGG | - | chr5_2:8043020-8043039 | Msa0754480:intron | 25.0% |
! | TGTACAATAATGTATACTAG+CGG | - | chr5_2:8043229-8043248 | Msa0754480:intron | 25.0% |
!! | AGATTTTGTAAGTCAAAGAA+AGG | + | chr5_2:8043508-8043527 | None:intergenic | 25.0% |
! | GTAAAGAAAGAAAAAAAGAG+GGG | + | chr5_2:8043531-8043550 | None:intergenic | 25.0% |
! | CTGTAAAGAAAGAAAAAAAG+AGG | + | chr5_2:8043533-8043552 | None:intergenic | 25.0% |
! | ATTATTAATTGAAGATCTCG+GGG | - | chr5_2:8043823-8043842 | Msa0754480:intron | 25.0% |
! | AAAAATAGGTAAGAAATGTG+GGG | + | chr5_2:8043981-8044000 | None:intergenic | 25.0% |
! | GAAAAATAGGTAAGAAATGT+GGG | + | chr5_2:8043982-8044001 | None:intergenic | 25.0% |
! | AGAAAAATAGGTAAGAAATG+TGG | + | chr5_2:8043983-8044002 | None:intergenic | 25.0% |
!! | TTTTTATCTAGCTGGAAAAA+GGG | + | chr5_2:8044016-8044035 | None:intergenic | 25.0% |
! | TGAATCCTCTATATGATATT+AGG | - | chr5_2:8044155-8044174 | Msa0754480:intron | 25.0% |
! | AAGTTGAATAACATGAAGAA+AGG | - | chr5_2:8044329-8044348 | Msa0754480:intron | 25.0% |
!! | CAATTTTATTAGGTGAAACA+AGG | - | chr5_2:8044486-8044505 | Msa0754480:intron | 25.0% |
! | ATACTATTTAAATTGGCTGT+TGG | - | chr5_2:8045229-8045248 | Msa0754480:intron | 25.0% |
! | ATAATCTTCATACTTCCATT+AGG | + | chr5_2:8045325-8045344 | None:intergenic | 25.0% |
! | AATATATTCAAGCTTTCACA+AGG | - | chr5_2:8045358-8045377 | Msa0754480:intron | 25.0% |
! | CAAGAAATAAGAATGCAATT+TGG | + | chr5_2:8045694-8045713 | None:intergenic | 25.0% |
! | ATATCACATTAATTTAAGGG+GGG | - | chr5_2:8046302-8046321 | Msa0754480:intron | 25.0% |
!! | TCTAAAAAAGTATGTTGTGT+GGG | + | chr5_2:8046359-8046378 | None:intergenic | 25.0% |
!! | TTCTAAAAAAGTATGTTGTG+TGG | + | chr5_2:8046360-8046379 | None:intergenic | 25.0% |
! | AAAGTATATGATTAGATGGT+TGG | + | chr5_2:8046411-8046430 | None:intergenic | 25.0% |
! | TTAACTAAGATTCAATGACT+AGG | - | chr5_2:8046492-8046511 | Msa0754480:intron | 25.0% |
!! | CCTCTGAACAAAATTATTTT+GGG | + | chr5_2:8046521-8046540 | None:intergenic | 25.0% |
!! | TCCTCTGAACAAAATTATTT+TGG | + | chr5_2:8046522-8046541 | None:intergenic | 25.0% |
! | ACATGTAGAATAGAATCAAT+TGG | + | chr5_2:8046581-8046600 | None:intergenic | 25.0% |
!! | TTTCTGCTTTATTATAGGAA+TGG | - | chr5_2:8046832-8046851 | Msa0754480:intron | 25.0% |
! | CACAACTAATCTAATAACAT+GGG | + | chr5_2:8046998-8047017 | None:intergenic | 25.0% |
! | TCACAACTAATCTAATAACA+TGG | + | chr5_2:8046999-8047018 | None:intergenic | 25.0% |
! | AATTATCAAGTCCTTAAAAC+AGG | + | chr5_2:8047416-8047435 | None:intergenic | 25.0% |
! | AATAAATTATCTGCATGACA+TGG | + | chr5_2:8047552-8047571 | None:intergenic | 25.0% |
! | TACATATGATTATGAAGAGA+CGG | - | chr5_2:8047631-8047650 | Msa0754480:five_prime_UTR | 25.0% |
! | AAGTTTGTAACGAATATTGT+CGG | + | chr5_2:8047728-8047747 | None:intergenic | 25.0% |
!! | ATTCGTTACAAACTTTTGTT+AGG | - | chr5_2:8047733-8047752 | Msa0754480:five_prime_UTR | 25.0% |
!!! | TCTTGTTTTTTACTTAGAGA+TGG | - | chr5_2:8047804-8047823 | Msa0754480:five_prime_UTR | 25.0% |
GAGACTTTAAATGCAGTTAA+CGG | + | chr5_2:8037659-8037678 | None:intergenic | 30.0% | |
ATCATTCAGAGTGAGTAAAT+CGG | - | chr5_2:8038156-8038175 | Msa0754480:intron | 30.0% | |
!!! | GTAAATCGGATTTTGCTATT+CGG | - | chr5_2:8038170-8038189 | Msa0754480:intron | 30.0% |
TATCCAAATAATCCTATGCT+TGG | - | chr5_2:8038604-8038623 | Msa0754480:intron | 30.0% | |
TTACCAAGCATAGGATTATT+TGG | + | chr5_2:8038610-8038629 | None:intergenic | 30.0% | |
AATAAGTCAAAATCCATGAC+CGG | + | chr5_2:8038717-8038736 | None:intergenic | 30.0% | |
! | CAAAACAAGGTTTCATTTTC+TGG | + | chr5_2:8038891-8038910 | None:intergenic | 30.0% |
!! | GAGCTTAATTTGTATATTGC+TGG | - | chr5_2:8039329-8039348 | Msa0754480:intron | 30.0% |
GGTGTAAAATGTGGTATTTA+TGG | - | chr5_2:8039359-8039378 | Msa0754480:intron | 30.0% | |
! | AACAAAACAGGGTTTAGAAT+TGG | + | chr5_2:8039468-8039487 | None:intergenic | 30.0% |
CACAAAACAAAACCTTCAAT+GGG | + | chr5_2:8039529-8039548 | None:intergenic | 30.0% | |
! | CATTGAACTGACTCAATATT+TGG | + | chr5_2:8039642-8039661 | None:intergenic | 30.0% |
CAAATATTGAGTCAGTTCAA+TGG | - | chr5_2:8039640-8039659 | Msa0754480:intron | 30.0% | |
!! | ACTCTTAGAATACTTTTTGG+GGG | + | chr5_2:8039723-8039742 | None:intergenic | 30.0% |
TCCCCTACAAATTAATATCA+TGG | + | chr5_2:8039948-8039967 | None:intergenic | 30.0% | |
GTTATTTACCCATACTTAAG+GGG | + | chr5_2:8039985-8040004 | None:intergenic | 30.0% | |
!! | GTGTTATTTACCCATACTTA+AGG | + | chr5_2:8039987-8040006 | None:intergenic | 30.0% |
! | ATGAGAAGCATATGAAAGAA+AGG | + | chr5_2:8040089-8040108 | None:intergenic | 30.0% |
ATGCTTCTCATCCATAAATT+AGG | - | chr5_2:8040098-8040117 | Msa0754480:CDS | 30.0% | |
GTGAAATTGTAATCGAAAGA+AGG | + | chr5_2:8040218-8040237 | None:intergenic | 30.0% | |
TTGATAGACGTTTAACCAAA+TGG | + | chr5_2:8040431-8040450 | None:intergenic | 30.0% | |
ACATATTCAAGGTTTCTCAA+GGG | + | chr5_2:8040535-8040554 | None:intergenic | 30.0% | |
! | GTAACTTCCTCTAATTTGTA+AGG | - | chr5_2:8040712-8040731 | Msa0754480:CDS | 30.0% |
! | TTAAAAGTGTATTACAGGAG+AGG | + | chr5_2:8040944-8040963 | None:intergenic | 30.0% |
GAATGTATTGTATTAACGAG+AGG | + | chr5_2:8040970-8040989 | None:intergenic | 30.0% | |
ATTGTCCTTTATAGTCAACA+AGG | + | chr5_2:8041104-8041123 | None:intergenic | 30.0% | |
GTTCCTTTATATGATACCTT+AGG | - | chr5_2:8041348-8041367 | Msa0754480:intron | 30.0% | |
AAAACGTTTACACATACCTA+AGG | + | chr5_2:8041367-8041386 | None:intergenic | 30.0% | |
TAAGAACTTTGATGTCTATC+CGG | - | chr5_2:8041774-8041793 | Msa0754480:intron | 30.0% | |
CAGCAATAAGCTCATAAATT+AGG | + | chr5_2:8041874-8041893 | None:intergenic | 30.0% | |
CTTGAAATTTATTACCATGC+AGG | - | chr5_2:8041971-8041990 | Msa0754480:CDS | 30.0% | |
CAAAATTTGAATTTCCTGCA+TGG | + | chr5_2:8041988-8042007 | None:intergenic | 30.0% | |
TTATTGGGCAAAATCATTGT+GGG | - | chr5_2:8042060-8042079 | Msa0754480:CDS | 30.0% | |
!! | GAAATGGGTTATACATAAAG+TGG | - | chr5_2:8042095-8042114 | Msa0754480:intron | 30.0% |
ATTTCACCCAATAAAAGAGT+GGG | - | chr5_2:8042132-8042151 | Msa0754480:intron | 30.0% | |
! | TTAACACCCACTCTTTTATT+GGG | + | chr5_2:8042141-8042160 | None:intergenic | 30.0% |
! | TTTAACACCCACTCTTTTAT+TGG | + | chr5_2:8042142-8042161 | None:intergenic | 30.0% |
GTGTCAAAACCAATGATAAT+TGG | + | chr5_2:8042295-8042314 | None:intergenic | 30.0% | |
CTCTCATACATATATGACTT+AGG | - | chr5_2:8042314-8042333 | Msa0754480:intron | 30.0% | |
TACATATATGACTTAGGTTC+TGG | - | chr5_2:8042320-8042339 | Msa0754480:intron | 30.0% | |
ACATATATGACTTAGGTTCT+GGG | - | chr5_2:8042321-8042340 | Msa0754480:intron | 30.0% | |
ATTTATTATATCCCATGCAG+AGG | - | chr5_2:8042352-8042371 | Msa0754480:intron | 30.0% | |
TATTTCAATAGATGAACCTC+AGG | + | chr5_2:8042410-8042429 | None:intergenic | 30.0% | |
TTGAGATATTTGGTTGCATT+TGG | + | chr5_2:8042550-8042569 | None:intergenic | 30.0% | |
ACACTTACTCTTGAGATATT+TGG | + | chr5_2:8042560-8042579 | None:intergenic | 30.0% | |
AAGCAAGAAGTTGAAAAGTT+TGG | - | chr5_2:8042687-8042706 | Msa0754480:intron | 30.0% | |
AGAAGTTGAAAAGTTTGGAT+TGG | - | chr5_2:8042692-8042711 | Msa0754480:intron | 30.0% | |
CTGCTCCTTGTATAATTAAT+TGG | - | chr5_2:8042810-8042829 | Msa0754480:intron | 30.0% | |
CTATTACTAAGACTAACTTC+CGG | + | chr5_2:8042909-8042928 | None:intergenic | 30.0% | |
!! | GAAGTTAGTCTTAGTAATAG+CGG | - | chr5_2:8042909-8042928 | Msa0754480:CDS | 30.0% |
CATTGTTTGAATAGTTGACT+TGG | - | chr5_2:8043019-8043038 | Msa0754480:intron | 30.0% | |
TTAATTTCTGCTAGGTAATG+AGG | + | chr5_2:8043090-8043109 | None:intergenic | 30.0% | |
AAGAGACATTAATTTCTGCT+AGG | + | chr5_2:8043098-8043117 | None:intergenic | 30.0% | |
! | ATATCGCTTCTTTTCTTTAC+AGG | + | chr5_2:8043208-8043227 | None:intergenic | 30.0% |
TATATCCAATTTCAAAGCTC+TGG | - | chr5_2:8043436-8043455 | Msa0754480:intron | 30.0% | |
!! | TAAATCCAGAGCTTTGAAAT+TGG | + | chr5_2:8043444-8043463 | None:intergenic | 30.0% |
TCATTGAGGAGACATTTATA+TGG | - | chr5_2:8043611-8043630 | Msa0754480:intron | 30.0% | |
!! | ATTCCAATTTTGGACTTGTT+GGG | + | chr5_2:8043745-8043764 | None:intergenic | 30.0% |
! | AATTCCAATTTTGGACTTGT+TGG | + | chr5_2:8043746-8043765 | None:intergenic | 30.0% |
! | AAAACCAACTATTTTCTGTG+CGG | - | chr5_2:8043850-8043869 | Msa0754480:intron | 30.0% |
! | TCATTTCTTGATAATTGGAG+TGG | - | chr5_2:8043946-8043965 | Msa0754480:intron | 30.0% |
! | CATTTCTTGATAATTGGAGT+GGG | - | chr5_2:8043947-8043966 | Msa0754480:intron | 30.0% |
AAAATAGGTAAGAAATGTGG+GGG | + | chr5_2:8043980-8043999 | None:intergenic | 30.0% | |
! | TTTTATCTAGCTGGAAAAAG+GGG | + | chr5_2:8044015-8044034 | None:intergenic | 30.0% |
! | GTTTTTATCTAGCTGGAAAA+AGG | + | chr5_2:8044017-8044036 | None:intergenic | 30.0% |
TTGACACAGAAAATTTCTTC+TGG | - | chr5_2:8044069-8044088 | Msa0754480:intron | 30.0% | |
AGTTGAATAATGTCTTCTTC+AGG | + | chr5_2:8044101-8044120 | None:intergenic | 30.0% | |
TTCTCAGAGCTTATGTTATT+TGG | + | chr5_2:8044298-8044317 | None:intergenic | 30.0% | |
TATTAGGTGAAACAAGGTTT+AGG | - | chr5_2:8044492-8044511 | Msa0754480:intron | 30.0% | |
ATTAGGTGAAACAAGGTTTA+GGG | - | chr5_2:8044493-8044512 | Msa0754480:intron | 30.0% | |
TATCTATGTGCTTATTGCAT+GGG | + | chr5_2:8044653-8044672 | None:intergenic | 30.0% | |
ATATCTATGTGCTTATTGCA+TGG | + | chr5_2:8044654-8044673 | None:intergenic | 30.0% | |
AAGTCTAACTGAAATCTATG+TGG | - | chr5_2:8044821-8044840 | Msa0754480:intron | 30.0% | |
AGTCTAACTGAAATCTATGT+GGG | - | chr5_2:8044822-8044841 | Msa0754480:intron | 30.0% | |
AGATATCAGCATATGTACTA+TGG | - | chr5_2:8044892-8044911 | Msa0754480:intron | 30.0% | |
GTCTTTGTTGAAATGAAAAC+AGG | - | chr5_2:8044928-8044947 | Msa0754480:intron | 30.0% | |
!! | TTCATTTGGTAATGAGACAA+AGG | + | chr5_2:8044977-8044996 | None:intergenic | 30.0% |
GAAAACATCAATAACCTGTA+TGG | + | chr5_2:8045191-8045210 | None:intergenic | 30.0% | |
GAAGTATGAAGATTATTGAC+CGG | - | chr5_2:8045329-8045348 | Msa0754480:intron | 30.0% | |
GCTTGAATATATTCTTCTTC+CGG | + | chr5_2:8045351-8045370 | None:intergenic | 30.0% | |
! | AATATTCTCCAGGTTTTCAA+CGG | + | chr5_2:8045395-8045414 | None:intergenic | 30.0% |
GAATAATTTCACTACAAGCT+AGG | + | chr5_2:8045480-8045499 | None:intergenic | 30.0% | |
ACGGAATTCAAAATATAAGC+AGG | - | chr5_2:8045592-8045611 | Msa0754480:intron | 30.0% | |
ATGCAATTTGGATTATGCTA+CGG | + | chr5_2:8045682-8045701 | None:intergenic | 30.0% | |
! | ATTGCATTCTTATTTCTTGC+TGG | - | chr5_2:8045695-8045714 | Msa0754480:intron | 30.0% |
TCATAATGAACTACAGAATG+TGG | + | chr5_2:8045847-8045866 | None:intergenic | 30.0% | |
TGTTTATGAGCTTATGCATA+TGG | + | chr5_2:8045930-8045949 | None:intergenic | 30.0% | |
AAAGATTGGAAAGGAAAAGA+AGG | - | chr5_2:8046199-8046218 | Msa0754480:intron | 30.0% | |
! | CCCAAAATAATTTTGTTCAG+AGG | - | chr5_2:8046518-8046537 | Msa0754480:intron | 30.0% |
!!! | TGTTCAGAGGATTTTTTAAG+TGG | - | chr5_2:8046531-8046550 | Msa0754480:intron | 30.0% |
!!! | TTTTTTAAGTGGTGTGTGTA+TGG | - | chr5_2:8046542-8046561 | Msa0754480:intron | 30.0% |
CCATCATAGCATAAAATTTC+AGG | + | chr5_2:8046632-8046651 | None:intergenic | 30.0% | |
! | CCTGAAATTTTATGCTATGA+TGG | - | chr5_2:8046629-8046648 | Msa0754480:CDS | 30.0% |
TCTTATATGTTGGAGTGATA+AGG | + | chr5_2:8046733-8046752 | None:intergenic | 30.0% | |
GTAAAAGTTGTCAAATTCTC+AGG | - | chr5_2:8046785-8046804 | Msa0754480:intron | 30.0% | |
TCAGTGGAAAGAAAATATGA+GGG | + | chr5_2:8046899-8046918 | None:intergenic | 30.0% | |
TTCTTATGGATCATATGAAC+AGG | + | chr5_2:8047149-8047168 | None:intergenic | 30.0% | |
GATTATCCTCTAGTTAATAG+TGG | - | chr5_2:8047321-8047340 | Msa0754480:intron | 30.0% | |
! | TTGAAACGTTAAAAGTGCAA+TGG | + | chr5_2:8047391-8047410 | None:intergenic | 30.0% |
!! | ACTGACTGCAATTTTATTTG+TGG | - | chr5_2:8047452-8047471 | Msa0754480:CDS | 30.0% |
! | TTGTTAATTTTGCCAAGGAA+TGG | + | chr5_2:8047775-8047794 | None:intergenic | 30.0% |
TTCCTTGGCAAAATTAACAA+TGG | - | chr5_2:8047775-8047794 | Msa0754480:five_prime_UTR | 30.0% | |
AGTTTGTGCAATAAGTGCAT+TGG | + | chr5_2:8037440-8037459 | None:intergenic | 35.0% | |
!!! | TTTTGACTTTGAAGAGTCGA+TGG | + | chr5_2:8037611-8037630 | None:intergenic | 35.0% |
GTTTAAGGGAAAGGGAATAT+TGG | + | chr5_2:8037634-8037653 | None:intergenic | 35.0% | |
ACTTTAAATGCAGTTAACGG+TGG | + | chr5_2:8037656-8037675 | None:intergenic | 35.0% | |
CAATCGATCGATGAGAAAAA+TGG | + | chr5_2:8037727-8037746 | None:intergenic | 35.0% | |
GCAGAAAAGATTCATCATTG+AGG | - | chr5_2:8037759-8037778 | Msa0754480:CDS | 35.0% | |
TCCTCTTGAAGGTTTATCTT+CGG | + | chr5_2:8037806-8037825 | None:intergenic | 35.0% | |
! | ATAGTTGCTGGGATGTTTTT+CGG | - | chr5_2:8037884-8037903 | Msa0754480:intron | 35.0% |
AGCATAGAGGACTTGAATAT+TGG | - | chr5_2:8038255-8038274 | Msa0754480:intron | 35.0% | |
GACTCATACTTAGTCCAAAA+TGG | + | chr5_2:8038296-8038315 | None:intergenic | 35.0% | |
GGCTAATGTCTTATCAATAC+AGG | + | chr5_2:8038535-8038554 | None:intergenic | 35.0% | |
TATGACATGGTGATCAAAGT+CGG | - | chr5_2:8038806-8038825 | Msa0754480:intron | 35.0% | |
AACTCACATGAACATGTTCT+TGG | + | chr5_2:8039157-8039176 | None:intergenic | 35.0% | |
! | TTTTCCTGATGAACTTAAGC+TGG | - | chr5_2:8039234-8039253 | Msa0754480:intron | 35.0% |
!! | TTTGTATATTGCTGGTTTGC+AGG | - | chr5_2:8039337-8039356 | Msa0754480:intron | 35.0% |
!! | TTGTATATTGCTGGTTTGCA+GGG | - | chr5_2:8039338-8039357 | Msa0754480:intron | 35.0% |
AAAGATTGGGGAACAAAACA+GGG | + | chr5_2:8039479-8039498 | None:intergenic | 35.0% | |
AAAACAAAACCTTCAATGGG+AGG | + | chr5_2:8039526-8039545 | None:intergenic | 35.0% | |
CCACAAAACAAAACCTTCAA+TGG | + | chr5_2:8039530-8039549 | None:intergenic | 35.0% | |
!!! | CCATTGAAGGTTTTGTTTTG+TGG | - | chr5_2:8039527-8039546 | Msa0754480:intron | 35.0% |
ATGTGTTGGATCACACAATA+AGG | + | chr5_2:8039594-8039613 | None:intergenic | 35.0% | |
AGCATAACATGGATGACTTA+GGG | + | chr5_2:8039668-8039687 | None:intergenic | 35.0% | |
GGGGACTTAAATCAGAAATA+AGG | + | chr5_2:8039704-8039723 | None:intergenic | 35.0% | |
AAAAGTTGGACACATTGGAT+CGG | + | chr5_2:8039811-8039830 | None:intergenic | 35.0% | |
CTACAATGACTTCGATTAGA+AGG | + | chr5_2:8039855-8039874 | None:intergenic | 35.0% | |
TCTAATCGAAGTCATTGTAG+AGG | - | chr5_2:8039855-8039874 | Msa0754480:CDS | 35.0% | |
! | CAACCAGATATAGGCTTTAA+TGG | - | chr5_2:8039883-8039902 | Msa0754480:CDS | 35.0% |
! | AGAAGCATATGAAAGAAAGG+AGG | + | chr5_2:8040086-8040105 | None:intergenic | 35.0% |
TGACAGCTGAACCTAATTTA+TGG | + | chr5_2:8040112-8040131 | None:intergenic | 35.0% | |
TTAGAACGATAGAAGAGCAA+AGG | + | chr5_2:8040397-8040416 | None:intergenic | 35.0% | |
CACATATTCAAGGTTTCTCA+AGG | + | chr5_2:8040536-8040555 | None:intergenic | 35.0% | |
GGATTAGGTAAATGAAAAGG+AGG | + | chr5_2:8040870-8040889 | None:intergenic | 35.0% | |
ATGAACCGGTTAATAGGATT+AGG | + | chr5_2:8040885-8040904 | None:intergenic | 35.0% | |
! | GGGCATTAAAAGTGTATTAC+AGG | + | chr5_2:8040949-8040968 | None:intergenic | 35.0% |
! | TACATTCACTCTGTTTGTTG+CGG | - | chr5_2:8040983-8041002 | Msa0754480:intron | 35.0% |
GAACAGGTATAAAACCGAAA+AGG | + | chr5_2:8041025-8041044 | None:intergenic | 35.0% | |
! | ATGTCTCCTGTGTTTTCTTT+TGG | - | chr5_2:8041057-8041076 | Msa0754480:intron | 35.0% |
GAACAACCAAAAGAAAACAC+AGG | + | chr5_2:8041066-8041085 | None:intergenic | 35.0% | |
! | GTAGTCCTTGTTGACTATAA+AGG | - | chr5_2:8041096-8041115 | Msa0754480:intron | 35.0% |
ATATTATAGCAAGGTGACCA+GGG | + | chr5_2:8041238-8041257 | None:intergenic | 35.0% | |
AATATTATAGCAAGGTGACC+AGG | + | chr5_2:8041239-8041258 | None:intergenic | 35.0% | |
TGCATGTTTGTACACAGTTA+TGG | - | chr5_2:8041386-8041405 | Msa0754480:CDS | 35.0% | |
AAATCTCATGCACATAGGTT+TGG | + | chr5_2:8041440-8041459 | None:intergenic | 35.0% | |
GTGTAAAATCTCATGCACAT+AGG | + | chr5_2:8041445-8041464 | None:intergenic | 35.0% | |
AAGCATAAATTGGTGAGCTT+GGG | + | chr5_2:8041529-8041548 | None:intergenic | 35.0% | |
TAAGCATAAATTGGTGAGCT+TGG | + | chr5_2:8041530-8041549 | None:intergenic | 35.0% | |
TAATAAAACAGGTACACCAC+CGG | + | chr5_2:8041698-8041717 | None:intergenic | 35.0% | |
! | TTTAGGCAACTGACAAGTTT+TGG | + | chr5_2:8041916-8041935 | None:intergenic | 35.0% |
CTTATTGGGCAAAATCATTG+TGG | - | chr5_2:8042059-8042078 | Msa0754480:CDS | 35.0% | |
TATTGGGCAAAATCATTGTG+GGG | - | chr5_2:8042061-8042080 | Msa0754480:CDS | 35.0% | |
! | ATGGGTTATACATAAAGTGG+TGG | - | chr5_2:8042098-8042117 | Msa0754480:intron | 35.0% |
TGGGTTATACATAAAGTGGT+GGG | - | chr5_2:8042099-8042118 | Msa0754480:intron | 35.0% | |
TTATTGGGTGAAATCCACAT+GGG | + | chr5_2:8042126-8042145 | None:intergenic | 35.0% | |
TTTATTGGGTGAAATCCACA+TGG | + | chr5_2:8042127-8042146 | None:intergenic | 35.0% | |
GATTTCACCCAATAAAAGAG+TGG | - | chr5_2:8042131-8042150 | Msa0754480:intron | 35.0% | |
CATATATGACTTAGGTTCTG+GGG | - | chr5_2:8042322-8042341 | Msa0754480:intron | 35.0% | |
AGAAGAAAAGAAGATACCTG+AGG | - | chr5_2:8042391-8042410 | Msa0754480:intron | 35.0% | |
AGACAGACTGTTCAAAGAAA+AGG | + | chr5_2:8042482-8042501 | None:intergenic | 35.0% | |
TATACAGCAATTGTGAGCTT+CGG | - | chr5_2:8042645-8042664 | Msa0754480:intron | 35.0% | |
!! | AACTTCTTGCTTTTGTTCAG+GGG | + | chr5_2:8042679-8042698 | None:intergenic | 35.0% |
!! | CAACTTCTTGCTTTTGTTCA+GGG | + | chr5_2:8042680-8042699 | None:intergenic | 35.0% |
!! | TCAACTTCTTGCTTTTGTTC+AGG | + | chr5_2:8042681-8042700 | None:intergenic | 35.0% |
CAACTATTTATGCTGCAAAG+GGG | + | chr5_2:8042859-8042878 | None:intergenic | 35.0% | |
CCAACTATTTATGCTGCAAA+GGG | + | chr5_2:8042860-8042879 | None:intergenic | 35.0% | |
ACCAACTATTTATGCTGCAA+AGG | + | chr5_2:8042861-8042880 | None:intergenic | 35.0% | |
TAAGGATGATATCAGGTCAA+TGG | - | chr5_2:8042987-8043006 | Msa0754480:intron | 35.0% | |
CTACTTCTGTAGACATATTG+TGG | - | chr5_2:8043121-8043140 | Msa0754480:intron | 35.0% | |
TGTGGTTTCCATTCCTAATT+TGG | - | chr5_2:8043139-8043158 | Msa0754480:intron | 35.0% | |
!!! | TGGTTTTTTATACTTGCCAC+AGG | - | chr5_2:8043159-8043178 | Msa0754480:intron | 35.0% |
!!! | GGTTTTTTATACTTGCCACA+GGG | - | chr5_2:8043160-8043179 | Msa0754480:intron | 35.0% |
TTGGATATCAATACTCCCTT+GGG | + | chr5_2:8043268-8043287 | None:intergenic | 35.0% | |
ATTGGATATCAATACTCCCT+TGG | + | chr5_2:8043269-8043288 | None:intergenic | 35.0% | |
GAGGGTAATAATACTCTCAT+TGG | + | chr5_2:8043287-8043306 | None:intergenic | 35.0% | |
AGTATTATTACCCTCTTAGC+TGG | - | chr5_2:8043292-8043311 | Msa0754480:intron | 35.0% | |
GTATTATTACCCTCTTAGCT+GGG | - | chr5_2:8043293-8043312 | Msa0754480:intron | 35.0% | |
TATTATTACCCTCTTAGCTG+GGG | - | chr5_2:8043294-8043313 | Msa0754480:intron | 35.0% | |
TTCTTTACAGTTGACTGAGA+AGG | - | chr5_2:8043543-8043562 | Msa0754480:intron | 35.0% | |
!!! | TTCCAATTTTGGACTTGTTG+GGG | + | chr5_2:8043744-8043763 | None:intergenic | 35.0% |
!! | CATTGTGAAAATGATGGACA+AGG | + | chr5_2:8043788-8043807 | None:intergenic | 35.0% |
! | CTTGTCCATCATTTTCACAA+TGG | - | chr5_2:8043786-8043805 | Msa0754480:intron | 35.0% |
ACACAGAAAATTTCTTCTGG+AGG | - | chr5_2:8044072-8044091 | Msa0754480:intron | 35.0% | |
ATTTCTGCATGACTTGACAA+AGG | + | chr5_2:8044195-8044214 | None:intergenic | 35.0% | |
GGAATATTGCAATGCTTACT+AGG | + | chr5_2:8044277-8044296 | None:intergenic | 35.0% | |
AACACAACTTTGTCAAGAAG+TGG | + | chr5_2:8044377-8044396 | None:intergenic | 35.0% | |
TGACAAAGTTGTGTTCGATA+AGG | - | chr5_2:8044382-8044401 | Msa0754480:intron | 35.0% | |
AAAAACATGCTGTGAAACTG+CGG | + | chr5_2:8044441-8044460 | None:intergenic | 35.0% | |
!!! | CAGCATGTTTTTTCTCCTTT+TGG | - | chr5_2:8044449-8044468 | Msa0754480:intron | 35.0% |
!! | TTTTCTCCTTTTGGCTGATT+TGG | - | chr5_2:8044458-8044477 | Msa0754480:intron | 35.0% |
TTAGGTGAAACAAGGTTTAG+GGG | - | chr5_2:8044494-8044513 | Msa0754480:intron | 35.0% | |
!!! | AGTGTACGTCTTATTTTGTC+TGG | - | chr5_2:8044519-8044538 | Msa0754480:intron | 35.0% |
TAAGTAACTTTCCACATGCA+AGG | + | chr5_2:8044559-8044578 | None:intergenic | 35.0% | |
TGCATGTGGAAAGTTACTTA+CGG | - | chr5_2:8044559-8044578 | Msa0754480:intron | 35.0% | |
! | CCAAGCATATCTAGTTCATT+TGG | + | chr5_2:8044991-8045010 | None:intergenic | 35.0% |
CCAAATGAACTAGATATGCT+TGG | - | chr5_2:8044988-8045007 | Msa0754480:intron | 35.0% | |
TTCACACAAATTTCTCCTCT+TGG | + | chr5_2:8045096-8045115 | None:intergenic | 35.0% | |
AAGAGGAGAAATTTGTGTGA+AGG | - | chr5_2:8045095-8045114 | Msa0754480:intron | 35.0% | |
AGAGGAGAAATTTGTGTGAA+GGG | - | chr5_2:8045096-8045115 | Msa0754480:intron | 35.0% | |
AACTGCATGGTTTATTCAAC+AGG | - | chr5_2:8045280-8045299 | Msa0754480:intron | 35.0% | |
ACTGCATGGTTTATTCAACA+GGG | - | chr5_2:8045281-8045300 | Msa0754480:intron | 35.0% | |
CTTGGCTATAAATATTCTCC+AGG | + | chr5_2:8045405-8045424 | None:intergenic | 35.0% | |
CAGATTCAACAGAAGTAACT+TGG | + | chr5_2:8045423-8045442 | None:intergenic | 35.0% | |
AAAATATCCAAGCCTAGAGA+TGG | + | chr5_2:8045650-8045669 | None:intergenic | 35.0% | |
AGAAGAAAATGGTATATCCG+TGG | - | chr5_2:8046118-8046137 | Msa0754480:intron | 35.0% | |
ACTAAGATTCAATGACTAGG+TGG | - | chr5_2:8046495-8046514 | Msa0754480:intron | 35.0% | |
GGATATGTTTGACAGTTGAA+AGG | - | chr5_2:8046650-8046669 | Msa0754480:CDS | 35.0% | |
GTTCCATATCAAATGGAACT+GGG | + | chr5_2:8046706-8046725 | None:intergenic | 35.0% | |
CAGTTCCATTTGATATGGAA+CGG | - | chr5_2:8046705-8046724 | Msa0754480:intron | 35.0% | |
AGTTCCATTTGATATGGAAC+GGG | - | chr5_2:8046706-8046725 | Msa0754480:intron | 35.0% | |
CTCCAACATATAAGAAGAAG+AGG | - | chr5_2:8046738-8046757 | Msa0754480:intron | 35.0% | |
TGATAGTATTTCAGCAACTG+AGG | + | chr5_2:8046764-8046783 | None:intergenic | 35.0% | |
TCAGTTGCTGAAATACTATC+AGG | - | chr5_2:8046763-8046782 | Msa0754480:intron | 35.0% | |
TGGAAAGAAAATATGAGGGA+AGG | + | chr5_2:8046895-8046914 | None:intergenic | 35.0% | |
CTCAGTGGAAAGAAAATATG+AGG | + | chr5_2:8046900-8046919 | None:intergenic | 35.0% | |
CGTATAACTGAAAACTGGTA+TGG | - | chr5_2:8046920-8046939 | Msa0754480:intron | 35.0% | |
TGATTGAGTGAACTAAGAGT+CGG | - | chr5_2:8046953-8046972 | Msa0754480:intron | 35.0% | |
GATATTAAAGCAGCGAAACA+GGG | + | chr5_2:8047042-8047061 | None:intergenic | 35.0% | |
TGATATTAAAGCAGCGAAAC+AGG | + | chr5_2:8047043-8047062 | None:intergenic | 35.0% | |
! | TGTTCAGTTTCAAGTCAGTT+TGG | + | chr5_2:8047221-8047240 | None:intergenic | 35.0% |
TTGAAACTGAACACTCTACA+TGG | - | chr5_2:8047228-8047247 | Msa0754480:intron | 35.0% | |
AATTGCAGTTGAAAGTGAAG+TGG | + | chr5_2:8047366-8047385 | None:intergenic | 35.0% | |
! | ACGTTTCAAAGCCTGTTTTA+AGG | - | chr5_2:8047402-8047421 | Msa0754480:CDS | 35.0% |
ATCGATGACATGTACAAAAG+TGG | - | chr5_2:8047486-8047505 | Msa0754480:CDS | 35.0% | |
ATGTACAGACAGTAACCAAA+AGG | + | chr5_2:8047616-8047635 | None:intergenic | 35.0% | |
GTATCTTTCACAGTTGAGTA+AGG | + | chr5_2:8047668-8047687 | None:intergenic | 35.0% | |
TTTGTAACGAATATTGTCGG+AGG | + | chr5_2:8047725-8047744 | None:intergenic | 35.0% | |
! | CACCATTGTTAATTTTGCCA+AGG | + | chr5_2:8047780-8047799 | None:intergenic | 35.0% |
TAACGGTGGTTTAAGGGAAA+GGG | + | chr5_2:8037642-8037661 | None:intergenic | 40.0% | |
TTAACGGTGGTTTAAGGGAA+AGG | + | chr5_2:8037643-8037662 | None:intergenic | 40.0% | |
TGCAGTTAACGGTGGTTTAA+GGG | + | chr5_2:8037648-8037667 | None:intergenic | 40.0% | |
ATGCAGTTAACGGTGGTTTA+AGG | + | chr5_2:8037649-8037668 | None:intergenic | 40.0% | |
ACCGAAGATAAACCTTCAAG+AGG | - | chr5_2:8037802-8037821 | Msa0754480:intron | 40.0% | |
CGTAGCATCTTCGCTAAAAA+TGG | - | chr5_2:8037835-8037854 | Msa0754480:intron | 40.0% | |
CAACTATCAAGACCAGGAAT+AGG | + | chr5_2:8037871-8037890 | None:intergenic | 40.0% | |
! | TTTTCTTGCCATAGCTTGAC+CGG | - | chr5_2:8038695-8038714 | Msa0754480:intron | 40.0% |
TTGGGTTCTCTGTACATGTT+GGG | - | chr5_2:8038960-8038979 | Msa0754480:intron | 40.0% | |
TGCATGAAACCGCACAAATT+TGG | + | chr5_2:8039029-8039048 | None:intergenic | 40.0% | |
TTTGTGCGGTTTCATGCAAT+TGG | - | chr5_2:8039031-8039050 | Msa0754480:intron | 40.0% | |
TTTGCCAGCTTAAGTTCATC+AGG | + | chr5_2:8039241-8039260 | None:intergenic | 40.0% | |
CATAATCCACTCTGCAGAAT+TGG | + | chr5_2:8039387-8039406 | None:intergenic | 40.0% | |
GAAAGATTGGGGAACAAAAC+AGG | + | chr5_2:8039480-8039499 | None:intergenic | 40.0% | |
! | AATTTTGTGCTGCCTCGTAA+GGG | + | chr5_2:8039560-8039579 | None:intergenic | 40.0% |
! | TAATTTTGTGCTGCCTCGTA+AGG | + | chr5_2:8039561-8039580 | None:intergenic | 40.0% |
TTACGAGGCAGCACAAAATT+AGG | - | chr5_2:8039560-8039579 | Msa0754480:intron | 40.0% | |
TACGAGGCAGCACAAAATTA+GGG | - | chr5_2:8039561-8039580 | Msa0754480:intron | 40.0% | |
GCATAACATGGATGACTTAG+GGG | + | chr5_2:8039667-8039686 | None:intergenic | 40.0% | |
GAGCATAACATGGATGACTT+AGG | + | chr5_2:8039669-8039688 | None:intergenic | 40.0% | |
! | CCAAATGAGAGAGCATAACA+TGG | + | chr5_2:8039679-8039698 | None:intergenic | 40.0% |
CCATGTTATGCTCTCTCATT+TGG | - | chr5_2:8039676-8039695 | Msa0754480:intron | 40.0% | |
CTAAGAGTTGTTCCTCTTGA+AGG | - | chr5_2:8039735-8039754 | Msa0754480:intron | 40.0% | |
TAGAACATTGAAGTGCAAGC+TGG | + | chr5_2:8039764-8039783 | None:intergenic | 40.0% | |
AGGGAAAAAGTTGGACACAT+TGG | + | chr5_2:8039816-8039835 | None:intergenic | 40.0% | |
AGAGACAAGAGGGAAAAAGT+TGG | + | chr5_2:8039825-8039844 | None:intergenic | 40.0% | |
TGACTTCGATTAGAAGGTTG+AGG | + | chr5_2:8039849-8039868 | None:intergenic | 40.0% | |
GCTCCATTAAAGCCTATATC+TGG | + | chr5_2:8039889-8039908 | None:intergenic | 40.0% | |
ACTCACATCCCCTTAAGTAT+GGG | - | chr5_2:8039974-8039993 | Msa0754480:intron | 40.0% | |
! | AGGATCTAAGATTGACGAGA+AGG | + | chr5_2:8040363-8040382 | None:intergenic | 40.0% |
! | GAGCAAAGGAAAGGGTTTTA+AGG | + | chr5_2:8040383-8040402 | None:intergenic | 40.0% |
CGATAGAAGAGCAAAGGAAA+GGG | + | chr5_2:8040391-8040410 | None:intergenic | 40.0% | |
ACGATAGAAGAGCAAAGGAA+AGG | + | chr5_2:8040392-8040411 | None:intergenic | 40.0% | |
! | ATAGACACCGTTAACTTGAG+AGG | - | chr5_2:8040586-8040605 | Msa0754480:intron | 40.0% |
! | TAGACACCGTTAACTTGAGA+GGG | - | chr5_2:8040587-8040606 | Msa0754480:intron | 40.0% |
TGCTATTGAGTCAAACCTCA+GGG | - | chr5_2:8040680-8040699 | Msa0754480:CDS | 40.0% | |
GCACTTGCCTTACAAATTAG+AGG | + | chr5_2:8040722-8040741 | None:intergenic | 40.0% | |
! | GCAGAGTTGGAGAAATTTTG+AGG | + | chr5_2:8040767-8040786 | None:intergenic | 40.0% |
ATGGAATCTTTCCTTCTCCA+AGG | - | chr5_2:8040797-8040816 | Msa0754480:intron | 40.0% | |
AGTACAAATCAGATCCTGGA+AGG | + | chr5_2:8040840-8040859 | None:intergenic | 40.0% | |
! | GAAGAGTACAAATCAGATCC+TGG | + | chr5_2:8040844-8040863 | None:intergenic | 40.0% |
TAGTGCATGAACCGGTTAAT+AGG | + | chr5_2:8040891-8040910 | None:intergenic | 40.0% | |
GTGTATTACAGGAGAGGTAA+GGG | + | chr5_2:8040938-8040957 | None:intergenic | 40.0% | |
AGTGTATTACAGGAGAGGTA+AGG | + | chr5_2:8040939-8040958 | None:intergenic | 40.0% | |
TTATTGCTCTTGTGCTTTCG+TGG | - | chr5_2:8041196-8041215 | Msa0754480:intron | 40.0% | |
GCTTAAAAACTTACACCCTC+CGG | - | chr5_2:8041545-8041564 | Msa0754480:intron | 40.0% | |
TGCTTATATTTGTGACCGGA+GGG | + | chr5_2:8041563-8041582 | None:intergenic | 40.0% | |
TTGCTTATATTTGTGACCGG+AGG | + | chr5_2:8041679-8041698 | None:intergenic | 40.0% | |
TTGCTTATATTTGTGACCGG+TGG | - | chr5_2:8041679-8041698 | Msa0754480:CDS | 40.0% | |
!! | CAACTGACAAGTTTTGGTGA+AGG | + | chr5_2:8041910-8041929 | None:intergenic | 40.0% |
TCTACCACTCACTCTCTTAT+TGG | - | chr5_2:8042044-8042063 | Msa0754480:CDS | 40.0% | |
CTACCACTCACTCTCTTATT+GGG | - | chr5_2:8042045-8042064 | Msa0754480:CDS | 40.0% | |
CCCTTTGCAGCATAAATAGT+TGG | - | chr5_2:8042857-8042876 | Msa0754480:CDS | 40.0% | |
! | GTTGAGTTGTATCACTGTCT+CGG | - | chr5_2:8042879-8042898 | Msa0754480:CDS | 40.0% |
TTACTAAGACTAACTTCCGG+TGG | + | chr5_2:8042906-8042925 | None:intergenic | 40.0% | |
! | CTTAGTAATAGCGGAATGTG+TGG | - | chr5_2:8042918-8042937 | Msa0754480:intron | 40.0% |
ATGTATACTAGCGGAACTAC+TGG | - | chr5_2:8043238-8043257 | Msa0754480:intron | 40.0% | |
TGGATATCAATACTCCCTTG+GGG | + | chr5_2:8043267-8043286 | None:intergenic | 40.0% | |
TCTCGCACACATCTTTGATA+GGG | - | chr5_2:8043588-8043607 | Msa0754480:intron | 40.0% | |
CATCTTTGATAGGGTCATTG+AGG | - | chr5_2:8043597-8043616 | Msa0754480:intron | 40.0% | |
GAGGAGACATTTATATGGCA+TGG | - | chr5_2:8043616-8043635 | Msa0754480:intron | 40.0% | |
GAGACATTTATATGGCATGG+TGG | - | chr5_2:8043619-8043638 | Msa0754480:intron | 40.0% | |
ATATGGCATGGTGGTTCAAT+AGG | - | chr5_2:8043628-8043647 | Msa0754480:intron | 40.0% | |
TGCAGCCATTGTGAAAATGA+TGG | + | chr5_2:8043794-8043813 | None:intergenic | 40.0% | |
! | ATCATTTTCACAATGGCTGC+AGG | - | chr5_2:8043793-8043812 | Msa0754480:intron | 40.0% |
AGTACACTCTCTCAAGTACA+CGG | + | chr5_2:8043880-8043899 | None:intergenic | 40.0% | |
GCAAAACCAAATCAGCCAAA+AGG | + | chr5_2:8044467-8044486 | None:intergenic | 40.0% | |
TAGGTGAAACAAGGTTTAGG+GGG | - | chr5_2:8044495-8044514 | Msa0754480:intron | 40.0% | |
GCATGTGGAAAGTTACTTAC+GGG | - | chr5_2:8044560-8044579 | Msa0754480:intron | 40.0% | |
ACTTGTGCTCATGTCATACA+AGG | - | chr5_2:8044588-8044607 | Msa0754480:intron | 40.0% | |
GCTCATGTCATACAAGGATA+TGG | - | chr5_2:8044594-8044613 | Msa0754480:intron | 40.0% | |
ACTAGATATGCTTGGAACAG+TGG | - | chr5_2:8044996-8045015 | Msa0754480:intron | 40.0% | |
CTAGATATGCTTGGAACAGT+GGG | - | chr5_2:8044997-8045016 | Msa0754480:intron | 40.0% | |
CTGGAATCTGTTCCTGAAAT+GGG | - | chr5_2:8045048-8045067 | Msa0754480:intron | 40.0% | |
TTTGTAGTACCCCGAAAACA+AGG | + | chr5_2:8045127-8045146 | None:intergenic | 40.0% | |
CTGCATGGTTTATTCAACAG+GGG | - | chr5_2:8045282-8045301 | Msa0754480:intron | 40.0% | |
GTTTATTCAACAGGGGACAT+TGG | - | chr5_2:8045289-8045308 | Msa0754480:intron | 40.0% | |
ATATGTTGCCGTTGAAAACC+TGG | - | chr5_2:8045384-8045403 | Msa0754480:intron | 40.0% | |
GGACACTAAAACCATTGGAA+GGG | + | chr5_2:8045459-8045478 | None:intergenic | 40.0% | |
AGGACACTAAAACCATTGGA+AGG | + | chr5_2:8045460-8045479 | None:intergenic | 40.0% | |
AGCTAGGACACTAAAACCAT+TGG | + | chr5_2:8045464-8045483 | None:intergenic | 40.0% | |
ACATGAATTGATGAACTCGC+TGG | - | chr5_2:8045539-8045558 | Msa0754480:intron | 40.0% | |
TATTCCTCCTGTCTCAGATA+TGG | - | chr5_2:8046021-8046040 | Msa0754480:intron | 40.0% | |
ATTCCTCCTGTCTCAGATAT+GGG | - | chr5_2:8046022-8046041 | Msa0754480:intron | 40.0% | |
CTGTCTCAGATATGGGTTTA+CGG | - | chr5_2:8046029-8046048 | Msa0754480:intron | 40.0% | |
! | GGTTTACGGAAACAGTTTTG+AGG | - | chr5_2:8046043-8046062 | Msa0754480:intron | 40.0% |
GTTAACAACAGCAACAAGGA+AGG | + | chr5_2:8046069-8046088 | None:intergenic | 40.0% | |
CAAACCAGCACTTGAACATT+GGG | - | chr5_2:8046094-8046113 | Msa0754480:intron | 40.0% | |
GAACATTGGGCAGAAGAAAA+TGG | - | chr5_2:8046107-8046126 | Msa0754480:intron | 40.0% | |
ACAGAGAGAATTGAAGTCCA+CGG | + | chr5_2:8046138-8046157 | None:intergenic | 40.0% | |
ATTCTCTCTGTGGAGATTCT+AGG | - | chr5_2:8046147-8046166 | Msa0754480:intron | 40.0% | |
TTCTCTCTGTGGAGATTCTA+GGG | - | chr5_2:8046148-8046167 | Msa0754480:intron | 40.0% | |
TGACCCAGTTCCATTTGATA+TGG | - | chr5_2:8046700-8046719 | Msa0754480:intron | 40.0% | |
CGTTCCATATCAAATGGAAC+TGG | + | chr5_2:8046707-8046726 | None:intergenic | 40.0% | |
GGCCTCTTCTTCTTATATGT+TGG | + | chr5_2:8046743-8046762 | None:intergenic | 40.0% | |
! | GTTTTCAGTTATACGCTCAG+TGG | + | chr5_2:8046915-8046934 | None:intergenic | 40.0% |
CTGAGCGTATAACTGAAAAC+TGG | - | chr5_2:8046915-8046934 | Msa0754480:intron | 40.0% | |
GTAGTCTCTTCACTTACACT+TGG | - | chr5_2:8047101-8047120 | Msa0754480:intron | 40.0% | |
TGCTCACCACTATTAACTAG+AGG | + | chr5_2:8047330-8047349 | None:intergenic | 40.0% | |
!! | CAACTCCAAAAGCATTTCTC+AGG | + | chr5_2:8047526-8047545 | None:intergenic | 40.0% |
!!! | CTGAGAAATGCTTTTGGAGT+TGG | - | chr5_2:8047524-8047543 | Msa0754480:five_prime_UTR | 40.0% |
AAATGTTAACTAGTGCCCCG+GGG | + | chr5_2:8037500-8037519 | None:intergenic | 45.0% | |
GAAATGTTAACTAGTGCCCC+GGG | + | chr5_2:8037501-8037520 | None:intergenic | 45.0% | |
GGAAATGTTAACTAGTGCCC+CGG | + | chr5_2:8037502-8037521 | None:intergenic | 45.0% | |
ATCGATCGATTGTTGAGCCA+TGG | - | chr5_2:8037735-8037754 | Msa0754480:exon | 45.0% | |
! | GATGAATCTTTTCTGCGCCA+TGG | + | chr5_2:8037755-8037774 | None:intergenic | 45.0% |
CATTGAGGTCGAAAAAGCGA+AGG | - | chr5_2:8037774-8037793 | Msa0754480:intron | 45.0% | |
! | GGTTTTCCATCTCCTATTCC+TGG | - | chr5_2:8037856-8037875 | Msa0754480:intron | 45.0% |
TCAAGACCAGGAATAGGAGA+TGG | + | chr5_2:8037865-8037884 | None:intergenic | 45.0% | |
!! | TTCCTGGTCTTGATAGTTGC+TGG | - | chr5_2:8037872-8037891 | Msa0754480:intron | 45.0% |
!! | TCCTGGTCTTGATAGTTGCT+GGG | - | chr5_2:8037873-8037892 | Msa0754480:intron | 45.0% |
TTGTGTGTGTGTGAGCATAG+AGG | - | chr5_2:8038242-8038261 | Msa0754480:intron | 45.0% | |
TCGCAGATCACGACAAATAG+AGG | - | chr5_2:8038366-8038385 | Msa0754480:intron | 45.0% | |
ATCTCTCGGTTACCAAGCAT+AGG | + | chr5_2:8038619-8038638 | None:intergenic | 45.0% | |
TGGACGGGAAGGTAAAGTAT+TGG | - | chr5_2:8038641-8038660 | Msa0754480:intron | 45.0% | |
AACAGCATGGCAAGTACAAG+TGG | - | chr5_2:8038765-8038784 | Msa0754480:intron | 45.0% | |
CTTGGGTTCTCTGTACATGT+TGG | - | chr5_2:8038959-8038978 | Msa0754480:intron | 45.0% | |
CGTGCAATGCCAAATTTGTG+CGG | - | chr5_2:8039017-8039036 | Msa0754480:intron | 45.0% | |
GGTTTGCAGGGTGTAAAATG+TGG | - | chr5_2:8039350-8039369 | Msa0754480:intron | 45.0% | |
!! | TGCAGAGTGGATTATGAGCA+TGG | - | chr5_2:8039391-8039410 | Msa0754480:intron | 45.0% |
!! | AGAGTGGATTATGAGCATGG+AGG | - | chr5_2:8039394-8039413 | Msa0754480:intron | 45.0% |
AGGCAGCAAGAGAAAGATTG+GGG | + | chr5_2:8039491-8039510 | None:intergenic | 45.0% | |
CAGGCAGCAAGAGAAAGATT+GGG | + | chr5_2:8039492-8039511 | None:intergenic | 45.0% | |
TCAGGCAGCAAGAGAAAGAT+TGG | + | chr5_2:8039493-8039512 | None:intergenic | 45.0% | |
TGTGGTTTCAATCCCTTACG+AGG | - | chr5_2:8039545-8039564 | Msa0754480:intron | 45.0% | |
TGTGATCCAACACATCTGTG+AGG | - | chr5_2:8039599-8039618 | Msa0754480:intron | 45.0% | |
ACAATGCCTCACAGATGTGT+TGG | + | chr5_2:8039608-8039627 | None:intergenic | 45.0% | |
AGGTTGAGGAAGAGACAAGA+GGG | + | chr5_2:8039835-8039854 | None:intergenic | 45.0% | |
AAGGTTGAGGAAGAGACAAG+AGG | + | chr5_2:8039836-8039855 | None:intergenic | 45.0% | |
GAGGCTTTGCAACCAGATAT+AGG | - | chr5_2:8039874-8039893 | Msa0754480:CDS | 45.0% | |
CACTCACATCCCCTTAAGTA+TGG | - | chr5_2:8039973-8039992 | Msa0754480:intron | 45.0% | |
TTAACGCCGTGAAAGCTCAA+GGG | + | chr5_2:8040045-8040064 | None:intergenic | 45.0% | |
TTTAACGCCGTGAAAGCTCA+AGG | + | chr5_2:8040046-8040065 | None:intergenic | 45.0% | |
! | AGACACCGTTAACTTGAGAG+GGG | - | chr5_2:8040588-8040607 | Msa0754480:intron | 45.0% |
CACTACCCCTCTCAAGTTAA+CGG | + | chr5_2:8040596-8040615 | None:intergenic | 45.0% | |
! | GTGCTATTGAGTCAAACCTC+AGG | - | chr5_2:8040679-8040698 | Msa0754480:CDS | 45.0% |
GCTATTGAGTCAAACCTCAG+GGG | - | chr5_2:8040681-8040700 | Msa0754480:CDS | 45.0% | |
!! | CATCGAGTTGATTGCAGAGT+TGG | + | chr5_2:8040780-8040799 | None:intergenic | 45.0% |
CAACTCTGCAATCAACTCGA+TGG | - | chr5_2:8040778-8040797 | Msa0754480:intron | 45.0% | |
AAATCAGATCCTGGAAGGTG+TGG | + | chr5_2:8040835-8040854 | None:intergenic | 45.0% | |
CAGACGTATAGTGCATGAAC+CGG | + | chr5_2:8040899-8040918 | None:intergenic | 45.0% | |
ATTACAGGAGAGGTAAGGGA+AGG | + | chr5_2:8040934-8040953 | None:intergenic | 45.0% | |
CGAGTGGAAGAAGCTAGTAA+AGG | + | chr5_2:8041262-8041281 | None:intergenic | 45.0% | |
TTGCCCAATAAGAGAGTGAG+TGG | + | chr5_2:8042051-8042070 | None:intergenic | 45.0% | |
!! | GGCATTTATTTTCGGCGAAG+TGG | + | chr5_2:8042232-8042251 | None:intergenic | 45.0% |
TGCAATTGAGACCTCTGCAT+GGG | + | chr5_2:8042366-8042385 | None:intergenic | 45.0% | |
ATGCAATTGAGACCTCTGCA+TGG | + | chr5_2:8042367-8042386 | None:intergenic | 45.0% | |
TTGGGAAGGATCAGAGAGTT+AGG | - | chr5_2:8042453-8042472 | Msa0754480:intron | 45.0% | |
AGCAATTGTGAGCTTCGGAA+AGG | - | chr5_2:8042650-8042669 | Msa0754480:intron | 45.0% | |
AAACTCTGACTTTCACCCTG+TGG | + | chr5_2:8043178-8043197 | None:intergenic | 45.0% | |
CTATCAAAGATGTGTGCGAG+AGG | + | chr5_2:8043589-8043608 | None:intergenic | 45.0% | |
CTCTCGCACACATCTTTGAT+AGG | - | chr5_2:8043587-8043606 | Msa0754480:intron | 45.0% | |
ATGGTGGTTCAATAGGCTTC+TGG | - | chr5_2:8043635-8043654 | Msa0754480:intron | 45.0% | |
CACCCCAACAAGTCCAAAAT+TGG | - | chr5_2:8043739-8043758 | Msa0754480:intron | 45.0% | |
GGTACCGCACAGAAAATAGT+TGG | + | chr5_2:8043857-8043876 | None:intergenic | 45.0% | |
TACACTCTCTCAAGTACACG+GGG | + | chr5_2:8043878-8043897 | None:intergenic | 45.0% | |
GTACACTCTCTCAAGTACAC+GGG | + | chr5_2:8043879-8043898 | None:intergenic | 45.0% | |
! | GTACTTGAGAGAGTGTACTC+AGG | - | chr5_2:8043881-8043900 | Msa0754480:intron | 45.0% |
! | TGAGAGAGTGTACTCAGGTA+TGG | - | chr5_2:8043886-8043905 | Msa0754480:intron | 45.0% |
TATCTAGCTGGAAAAAGGGG+TGG | + | chr5_2:8044012-8044031 | None:intergenic | 45.0% | |
GATTCTCAACTTCGGTATGC+AGG | - | chr5_2:8044045-8044064 | Msa0754480:intron | 45.0% | |
CTTTCCACATGCAAGGATAG+AGG | + | chr5_2:8044552-8044571 | None:intergenic | 45.0% | |
TGTGGAAAGTTACTTACGGG+TGG | - | chr5_2:8044563-8044582 | Msa0754480:intron | 45.0% | |
CCATTTCAGGAACAGATTCC+AGG | + | chr5_2:8045050-8045069 | None:intergenic | 45.0% | |
CCTGGAATCTGTTCCTGAAA+TGG | - | chr5_2:8045047-8045066 | Msa0754480:intron | 45.0% | |
!!! | GAAGGGCGATACCTTGTTTT+CGG | - | chr5_2:8045113-8045132 | Msa0754480:intron | 45.0% |
!!! | AAGGGCGATACCTTGTTTTC+GGG | - | chr5_2:8045114-8045133 | Msa0754480:intron | 45.0% |
! | ACGAAAGAGGTTCTGGTTGA+TGG | - | chr5_2:8045159-8045178 | Msa0754480:intron | 45.0% |
!! | AAGAGGTTCTGGTTGATGGA+TGG | - | chr5_2:8045163-8045182 | Msa0754480:intron | 45.0% |
! | GTTGATGGATGGTTCCATAC+AGG | - | chr5_2:8045174-8045193 | Msa0754480:intron | 45.0% |
ATTGGAGAGTGGCAACCTAA+TGG | - | chr5_2:8045307-8045326 | Msa0754480:intron | 45.0% | |
! | AAACCCATATCTGAGACAGG+AGG | + | chr5_2:8046028-8046047 | None:intergenic | 45.0% |
! | CGTAAACCCATATCTGAGAC+AGG | + | chr5_2:8046031-8046050 | None:intergenic | 45.0% |
TGGGGTTAACAACAGCAACA+AGG | + | chr5_2:8046073-8046092 | None:intergenic | 45.0% | |
!! | TGTTCAAGTGCTGGTTTGCT+GGG | + | chr5_2:8046092-8046111 | None:intergenic | 45.0% |
!! | ATGTTCAAGTGCTGGTTTGC+TGG | + | chr5_2:8046093-8046112 | None:intergenic | 45.0% |
GCAAACCAGCACTTGAACAT+TGG | - | chr5_2:8046093-8046112 | Msa0754480:intron | 45.0% | |
GTGGACTTCAATTCTCTCTG+TGG | - | chr5_2:8046137-8046156 | Msa0754480:intron | 45.0% | |
CTTGACGAGCTCTCAAAGAT+TGG | - | chr5_2:8046185-8046204 | Msa0754480:intron | 45.0% | |
CGAGCTCTCAAAGATTGGAA+AGG | - | chr5_2:8046190-8046209 | Msa0754480:intron | 45.0% | |
CAAATGGAACTGGGTCAAGA+TGG | + | chr5_2:8046697-8046716 | None:intergenic | 45.0% | |
AGGTCCCGTTCCATATCAAA+TGG | + | chr5_2:8046713-8046732 | None:intergenic | 45.0% | |
!! | AAAAGCATTTCTCAGGCACG+GGG | + | chr5_2:8047519-8047538 | None:intergenic | 45.0% |
!! | CAAAAGCATTTCTCAGGCAC+GGG | + | chr5_2:8047520-8047539 | None:intergenic | 45.0% |
!! | CCAAAAGCATTTCTCAGGCA+CGG | + | chr5_2:8047521-8047540 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTATCAAATATA+AGG | + | chr5_2:8041729-8041748 | None:intergenic | 5.0% |
AACGTGCTCAGCGTAATTGC+TGG | + | chr5_2:8037550-8037569 | None:intergenic | 50.0% | |
TCATACCCTACCCTACACTC+TGG | - | chr5_2:8037579-8037598 | Msa0754480:three_prime_UTR | 50.0% | |
ATGGAGTGAGCCAGAGTGTA+GGG | + | chr5_2:8037592-8037611 | None:intergenic | 50.0% | |
TCCCAGCAACTATCAAGACC+AGG | + | chr5_2:8037877-8037896 | None:intergenic | 50.0% | |
! | GCTTGGTAACCGAGAGATTG+TGG | - | chr5_2:8038621-8038640 | Msa0754480:intron | 50.0% |
GGTAACCGAGAGATTGTGGA+CGG | - | chr5_2:8038625-8038644 | Msa0754480:intron | 50.0% | |
GTAACCGAGAGATTGTGGAC+GGG | - | chr5_2:8038626-8038645 | Msa0754480:intron | 50.0% | |
ATCCATGACCGGTCAAGCTA+TGG | + | chr5_2:8038706-8038725 | None:intergenic | 50.0% | |
GGAAATTCTATCCGCAGCTG+TGG | - | chr5_2:8038827-8038846 | Msa0754480:intron | 50.0% | |
TCTATCCGCAGCTGTGGTTA+TGG | - | chr5_2:8038833-8038852 | Msa0754480:intron | 50.0% | |
CTTCTCCATAACCACAGCTG+CGG | + | chr5_2:8038841-8038860 | None:intergenic | 50.0% | |
! | ATGGTGCCAATTCTGCAGAG+TGG | - | chr5_2:8039378-8039397 | Msa0754480:intron | 50.0% |
! | ATGGGAGGCATGAGTCAATC+AGG | + | chr5_2:8039511-8039530 | None:intergenic | 50.0% |
TGACTCATGCCTCCCATTGA+AGG | - | chr5_2:8039514-8039533 | Msa0754480:intron | 50.0% | |
GTTGGACACATTGGATCGGA+CGG | + | chr5_2:8039807-8039826 | None:intergenic | 50.0% | |
TAACGCCGTGAAAGCTCAAG+GGG | + | chr5_2:8040044-8040063 | None:intergenic | 50.0% | |
ATTGAGTCAAACCTCAGGGG+AGG | - | chr5_2:8040684-8040703 | Msa0754480:CDS | 50.0% | |
CAAAGTTGGAGCCTTGGAGA+AGG | + | chr5_2:8040811-8040830 | None:intergenic | 50.0% | |
TGTGGACAAAGTTGGAGCCT+TGG | + | chr5_2:8040817-8040836 | None:intergenic | 50.0% | |
! | CTGGAAGGTGTGGACAAAGT+TGG | + | chr5_2:8040825-8040844 | None:intergenic | 50.0% |
CAACTTTGTCCACACCTTCC+AGG | - | chr5_2:8040823-8040842 | Msa0754480:intron | 50.0% | |
TTGCAGGCTTGCAATGCTCA+TGG | - | chr5_2:8041315-8041334 | Msa0754480:intron | 50.0% | |
TCATTGTGGGGCTCACACTT+TGG | - | chr5_2:8042073-8042092 | Msa0754480:intron | 50.0% | |
! | TGGGGCTCACACTTTGGAAA+TGG | - | chr5_2:8042079-8042098 | Msa0754480:intron | 50.0% |
! | GGGGCTCACACTTTGGAAAT+GGG | - | chr5_2:8042080-8042099 | Msa0754480:intron | 50.0% |
! | ATAAAGTGGTGGGACCCATG+TGG | - | chr5_2:8042109-8042128 | Msa0754480:intron | 50.0% |
AGGGGACTCAGAGCAATTGT+AGG | + | chr5_2:8042841-8042860 | None:intergenic | 50.0% | |
CAAAGATGTGTGCGAGAGGA+AGG | + | chr5_2:8043585-8043604 | None:intergenic | 50.0% | |
GTTCAATAGGCTTCTGGCGT+GGG | - | chr5_2:8043641-8043660 | Msa0754480:intron | 50.0% | |
TTCAATAGGCTTCTGGCGTG+GGG | - | chr5_2:8043642-8043661 | Msa0754480:intron | 50.0% | |
GGGTGGCAGCTCAGAAAAAT+AGG | + | chr5_2:8043995-8044014 | None:intergenic | 50.0% | |
AGCACCTCTATCCTTGCATG+TGG | - | chr5_2:8044545-8044564 | Msa0754480:intron | 50.0% | |
AGGTCTGACTGAAACCTGTG+CGG | - | chr5_2:8044948-8044967 | Msa0754480:intron | 50.0% | |
GCATCCACATTTGGTACAGG+AGG | + | chr5_2:8045024-8045043 | None:intergenic | 50.0% | |
CACGCATCCACATTTGGTAC+AGG | + | chr5_2:8045027-8045046 | None:intergenic | 50.0% | |
!! | AGGGCATCGTAACCCATTTC+AGG | + | chr5_2:8045063-8045082 | None:intergenic | 50.0% |
! | TCCTCTTGGTGTGCTTGCAA+GGG | + | chr5_2:8045082-8045101 | None:intergenic | 50.0% |
!!! | AGGGCGATACCTTGTTTTCG+GGG | - | chr5_2:8045115-8045134 | Msa0754480:intron | 50.0% |
! | TTCGGGGTACTACAAACGTG+AGG | - | chr5_2:8045131-8045150 | Msa0754480:intron | 50.0% |
CAACCAGAACCTCTTTCGTG+AGG | + | chr5_2:8045158-8045177 | None:intergenic | 50.0% | |
TGTCTTGAGAGCCCTTCCAA+TGG | - | chr5_2:8045445-8045464 | Msa0754480:intron | 50.0% | |
TGGCGTCTCTGCATTAACTG+AGG | + | chr5_2:8045630-8045649 | None:intergenic | 50.0% | |
AATGCAGAGACGCCATCTCT+AGG | - | chr5_2:8045635-8045654 | Msa0754480:intron | 50.0% | |
ACGACTGCACATAGGACTAC+GGG | + | chr5_2:8045780-8045799 | None:intergenic | 50.0% | |
CACGACTGCACATAGGACTA+CGG | + | chr5_2:8045781-8045800 | None:intergenic | 50.0% | |
ATCTGTGCACGACTGCACAT+AGG | + | chr5_2:8045788-8045807 | None:intergenic | 50.0% | |
GCACAGATTCTGGTCCGTAT+TGG | - | chr5_2:8045800-8045819 | Msa0754480:intron | 50.0% | |
!! | GTTCAAGTGCTGGTTTGCTG+GGG | + | chr5_2:8046091-8046110 | None:intergenic | 50.0% |
TCTGCCCAATGTTCAAGTGC+TGG | + | chr5_2:8046101-8046120 | None:intergenic | 50.0% | |
! | CCGTGCCTGAGAAATGCTTT+TGG | - | chr5_2:8047518-8047537 | Msa0754480:five_prime_UTR | 50.0% |
ATGGTCCTTAACCAGTGCCC+CGG | - | chr5_2:8037480-8037499 | Msa0754480:three_prime_UTR | 55.0% | |
GTGAGCCAGAGTGTAGGGTA+GGG | + | chr5_2:8037587-8037606 | None:intergenic | 55.0% | |
AGTGAGCCAGAGTGTAGGGT+AGG | + | chr5_2:8037588-8037607 | None:intergenic | 55.0% | |
GATGGAGTGAGCCAGAGTGT+AGG | + | chr5_2:8037593-8037612 | None:intergenic | 55.0% | |
CGATACGCAGGTCCTCTTGA+AGG | + | chr5_2:8037817-8037836 | None:intergenic | 55.0% | |
GCGAAGATGCTACGATACGC+AGG | + | chr5_2:8037829-8037848 | None:intergenic | 55.0% | |
CCTTCCCGTCCACAATCTCT+CGG | + | chr5_2:8038633-8038652 | None:intergenic | 55.0% | |
TGCCATAGCTTGACCGGTCA+TGG | - | chr5_2:8038701-8038720 | Msa0754480:intron | 55.0% | |
GCAAGCTGGAGTCCTTCAAG+AGG | + | chr5_2:8039750-8039769 | None:intergenic | 55.0% | |
! | ATTGGATCGGACGGACTCAG+TGG | + | chr5_2:8039798-8039817 | None:intergenic | 55.0% |
CAACCCCCCTTGAGCTTTCA+CGG | - | chr5_2:8040036-8040055 | Msa0754480:intron | 55.0% | |
AACGCCGTGAAAGCTCAAGG+GGG | + | chr5_2:8040043-8040062 | None:intergenic | 55.0% | |
AGTTACACTCACCTCCCCTG+AGG | + | chr5_2:8040698-8040717 | None:intergenic | 55.0% | |
! | GTGCTGTTAGTGAGCATCCC+TGG | - | chr5_2:8041218-8041237 | Msa0754480:intron | 55.0% |
GTATCACTGTCTCGGTCCAC+CGG | - | chr5_2:8042887-8042906 | Msa0754480:CDS | 55.0% | |
GGAACTACTGGTGACCCCAA+GGG | - | chr5_2:8043250-8043269 | Msa0754480:intron | 55.0% | |
GGTTCAATAGGCTTCTGGCG+TGG | - | chr5_2:8043640-8043659 | Msa0754480:intron | 55.0% | |
GAAGTGGACATGCTGCAGCA+TGG | + | chr5_2:8044361-8044380 | None:intergenic | 55.0% | |
ACATGCTGTGAAACTGCGGC+TGG | + | chr5_2:8044437-8044456 | None:intergenic | 55.0% | |
GGTCTGACTGAAACCTGTGC+GGG | - | chr5_2:8044949-8044968 | Msa0754480:intron | 55.0% | |
TGAGACAAAGGTTCCCGCAC+AGG | + | chr5_2:8044965-8044984 | None:intergenic | 55.0% | |
GGGTCCTCCTGTACCAAATG+TGG | - | chr5_2:8045017-8045036 | Msa0754480:intron | 55.0% | |
ACCAAATGTGGATGCGTGCC+TGG | - | chr5_2:8045029-8045048 | Msa0754480:intron | 55.0% | |
TCCAGGCACGCATCCACATT+TGG | + | chr5_2:8045033-8045052 | None:intergenic | 55.0% | |
! | CTCCTCTTGGTGTGCTTGCA+AGG | + | chr5_2:8045083-8045102 | None:intergenic | 55.0% |
ACGTGAGGACCTCACGAAAG+AGG | - | chr5_2:8045146-8045165 | Msa0754480:intron | 55.0% | |
GGACCTCACGAAAGAGGTTC+TGG | - | chr5_2:8045152-8045171 | Msa0754480:intron | 55.0% | |
CAACAGGGGACATTGGAGAG+TGG | - | chr5_2:8045296-8045315 | Msa0754480:intron | 55.0% | |
AGAGACGCCATCTCTAGGCT+TGG | - | chr5_2:8045640-8045659 | Msa0754480:intron | 55.0% | |
GTGCAGTCGTGCACAGATTC+TGG | - | chr5_2:8045790-8045809 | Msa0754480:intron | 55.0% | |
TGGTCCTTAACCAGTGCCCC+GGG | - | chr5_2:8037481-8037500 | Msa0754480:three_prime_UTR | 60.0% | |
CCGAGAGATTGTGGACGGGA+AGG | - | chr5_2:8038630-8038649 | Msa0754480:intron | 60.0% | |
ACGCCGTGAAAGCTCAAGGG+GGG | + | chr5_2:8040042-8040061 | None:intergenic | 60.0% | |
CGGAACTACTGGTGACCCCA+AGG | - | chr5_2:8043249-8043268 | Msa0754480:intron | 60.0% | |
CCGCTTCACCCCAGCTAAGA+GGG | + | chr5_2:8043305-8043324 | None:intergenic | 60.0% | |
CCCTCTTAGCTGGGGTGAAG+CGG | - | chr5_2:8043302-8043321 | Msa0754480:intron | 60.0% | |
AGCTGGGGTGAAGCGGCTAT+TGG | - | chr5_2:8043309-8043328 | Msa0754480:intron | 60.0% | |
GCCCTTGCAAGCACACCAAG+AGG | - | chr5_2:8045078-8045097 | Msa0754480:intron | 60.0% | |
GGTCCTTAACCAGTGCCCCG+GGG | - | chr5_2:8037482-8037501 | Msa0754480:three_prime_UTR | 65.0% | |
TAACTAGTGCCCCGGGGCAC+TGG | + | chr5_2:8037494-8037513 | None:intergenic | 65.0% | |
! | GGATCGGACGGACTCAGTGG+AGG | + | chr5_2:8039795-8039814 | None:intergenic | 65.0% |
GCCGCTTCACCCCAGCTAAG+AGG | + | chr5_2:8043306-8043325 | None:intergenic | 65.0% | |
!! | GTGCCCCGGGGCACTGGTTA+AGG | + | chr5_2:8037488-8037507 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 8037427 | 8047838 | 8037427 | ID=Msa0754480;Name=Msa0754480 |
chr5_2 | mRNA | 8037427 | 8047838 | 8037427 | ID=Msa0754480-mRNA-1;Parent=Msa0754480;Name=Msa0754480-mRNA-1;_AED=0.16;_eAED=0.16;_QI=327|1|1|1|1|1|19|311|662 |
chr5_2 | exon | 8037427 | 8037785 | 8037427 | ID=Msa0754480-mRNA-1:exon:3723;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8038481 | 8038600 | 8038481 | ID=Msa0754480-mRNA-1:exon:3722;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8039045 | 8039227 | 8039045 | ID=Msa0754480-mRNA-1:exon:3721;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8039824 | 8039963 | 8039824 | ID=Msa0754480-mRNA-1:exon:3720;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8040070 | 8040315 | 8040070 | ID=Msa0754480-mRNA-1:exon:3719;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8040650 | 8040767 | 8040650 | ID=Msa0754480-mRNA-1:exon:3718;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8040862 | 8040937 | 8040862 | ID=Msa0754480-mRNA-1:exon:3717;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8041132 | 8041198 | 8041132 | ID=Msa0754480-mRNA-1:exon:3716;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8041363 | 8041450 | 8041363 | ID=Msa0754480-mRNA-1:exon:3715;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8041602 | 8041712 | 8041602 | ID=Msa0754480-mRNA-1:exon:3714;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8041917 | 8042084 | 8041917 | ID=Msa0754480-mRNA-1:exon:3713;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8042519 | 8042613 | 8042519 | ID=Msa0754480-mRNA-1:exon:3712;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8042694 | 8042733 | 8042694 | ID=Msa0754480-mRNA-1:exon:3711;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8042853 | 8042929 | 8042853 | ID=Msa0754480-mRNA-1:exon:3710;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8043896 | 8043944 | 8043896 | ID=Msa0754480-mRNA-1:exon:3709;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8045850 | 8045906 | 8045850 | ID=Msa0754480-mRNA-1:exon:3708;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8046406 | 8046495 | 8046406 | ID=Msa0754480-mRNA-1:exon:3707;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8046614 | 8046677 | 8046614 | ID=Msa0754480-mRNA-1:exon:3706;Parent=Msa0754480-mRNA-1 |
chr5_2 | exon | 8047360 | 8047838 | 8047360 | ID=Msa0754480-mRNA-1:exon:3705;Parent=Msa0754480-mRNA-1 |
chr5_2 | five_prime_UTR | 8047512 | 8047838 | 8047512 | ID=Msa0754480-mRNA-1:five_prime_utr;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8047360 | 8047511 | 8047360 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8046614 | 8046677 | 8046614 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8046406 | 8046495 | 8046406 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8045850 | 8045906 | 8045850 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8043896 | 8043944 | 8043896 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8042853 | 8042929 | 8042853 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8042694 | 8042733 | 8042694 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8042519 | 8042613 | 8042519 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8041917 | 8042084 | 8041917 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8041602 | 8041712 | 8041602 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8041363 | 8041450 | 8041363 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8041132 | 8041198 | 8041132 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8040862 | 8040937 | 8040862 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8040650 | 8040767 | 8040650 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8040070 | 8040315 | 8040070 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8039824 | 8039963 | 8039824 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8039045 | 8039227 | 8039045 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8038481 | 8038600 | 8038481 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | CDS | 8037738 | 8037785 | 8037738 | ID=Msa0754480-mRNA-1:cds;Parent=Msa0754480-mRNA-1 |
chr5_2 | three_prime_UTR | 8037427 | 8037737 | 8037427 | ID=Msa0754480-mRNA-1:three_prime_utr;Parent=Msa0754480-mRNA-1 |
Gene Sequence |
Protein sequence |