AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0716620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716620 MtrunA17_Chr5g0404511 88.959 317 4 1 1 286 1 317 0.0 563
Msa0716620 MtrunA17_Chr5g0404511 88.994 318 4 1 294 580 1 318 0.0 562
Msa0716620 MtrunA17_Chr5g0404481 88.644 317 5 1 1 286 1 317 0.0 562
Msa0716620 MtrunA17_Chr5g0404481 88.679 318 5 1 294 580 1 318 0.0 561
Msa0716620 MtrunA17_Chr5g0404471 53.774 318 104 3 295 580 3 309 8.84e-111 333
Msa0716620 MtrunA17_Chr5g0404471 53.312 317 105 3 2 286 3 308 3.16e-110 332
Msa0716620 MtrunA17_Chr3g0141681 53.583 321 104 4 294 580 1 310 1.84e-104 317
Msa0716620 MtrunA17_Chr3g0141681 53.125 320 105 4 1 286 1 309 5.85e-104 316
Msa0716620 MtrunA17_Chr3g0141691 51.097 319 113 3 294 580 1 308 6.43e-101 308
Msa0716620 MtrunA17_Chr3g0141691 50.943 318 113 3 1 286 1 307 1.35e-100 307
Msa0716620 MtrunA17_Chr3g0144701 50.000 314 114 3 5 286 9 311 1.05e-97 300
Msa0716620 MtrunA17_Chr3g0144701 49.841 315 115 3 298 580 9 312 2.16e-97 299
Msa0716620 MtrunA17_Chr4g0035131 45.016 311 128 3 7 285 47 346 1.46e-83 265
Msa0716620 MtrunA17_Chr4g0035131 44.720 322 132 4 292 578 36 346 1.49e-83 265
Msa0716620 MtrunA17_Chr4g0035111 44.231 312 131 3 6 285 8 308 8.98e-81 256
Msa0716620 MtrunA17_Chr4g0035111 44.231 312 131 3 299 578 8 308 4.54e-80 255
Msa0716620 MtrunA17_Chr5g0409651 41.379 319 140 5 4 286 3 310 1.16e-73 238
Msa0716620 MtrunA17_Chr5g0409651 41.562 320 138 6 297 579 3 310 3.30e-73 236
Msa0716620 MtrunA17_Chr5g0409641 41.066 319 141 5 4 286 3 310 7.15e-73 235
Msa0716620 MtrunA17_Chr5g0409641 41.250 320 139 6 297 579 3 310 2.02e-72 234
Msa0716620 MtrunA17_Chr8g0369391 38.941 321 148 7 297 580 3 312 6.33e-66 217
Msa0716620 MtrunA17_Chr8g0369391 38.994 318 146 7 4 284 3 309 6.75e-66 217
Msa0716620 MtrunA17_Chr4g0035121 36.478 318 157 3 297 580 3 309 1.46e-64 214
Msa0716620 MtrunA17_Chr4g0035121 36.164 318 158 3 4 287 3 309 3.46e-64 213
Msa0716620 MtrunA17_Chr3g0078831 36.278 317 157 6 295 580 3 305 5.20e-58 196
Msa0716620 MtrunA17_Chr3g0078831 35.962 317 158 6 2 287 3 305 6.08e-58 196
Msa0716620 MtrunA17_Chr3g0078901 36.562 320 152 6 295 580 3 305 1.05e-57 196
Msa0716620 MtrunA17_Chr3g0078901 36.250 320 153 6 2 287 3 305 1.16e-57 196
Msa0716620 MtrunA17_Chr1g0198771 35.664 286 165 5 3 284 12 282 5.41e-53 184
Msa0716620 MtrunA17_Chr1g0198771 32.602 319 169 4 296 580 12 318 1.93e-52 182
Msa0716620 MtrunA17_Chr3g0078941 32.512 203 104 3 408 580 12 211 8.18e-29 114
Msa0716620 MtrunA17_Chr3g0078941 32.178 202 104 3 115 286 12 210 1.27e-28 114
Msa0716620 MtrunA17_Chr3g0078951 42.241 116 54 3 2 117 3 105 4.27e-18 80.5
Msa0716620 MtrunA17_Chr3g0078951 42.241 116 54 3 295 410 3 105 4.27e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716620 AT4G39230.1 48.903 319 120 3 294 580 1 308 6.18e-98 301
Msa0716620 AT4G39230.1 48.428 318 121 3 1 286 1 307 1.70e-96 297
Msa0716620 AT1G75280.1 49.688 320 116 5 294 579 1 309 1.74e-96 297
Msa0716620 AT1G75280.1 49.375 320 117 5 1 286 1 309 2.88e-96 296
Msa0716620 AT1G75290.1 48.910 321 118 5 294 579 1 310 4.12e-96 296
Msa0716620 AT1G75290.1 48.598 321 119 5 1 286 1 310 7.69e-96 295
Msa0716620 AT1G75290.2 48.171 328 124 5 287 579 21 337 9.26e-96 296
Msa0716620 AT1G75290.2 48.598 321 119 5 1 286 28 337 3.15e-95 295
Msa0716620 AT1G75300.1 47.892 332 116 6 294 579 1 321 1.01e-90 283
Msa0716620 AT1G75300.1 47.590 332 117 6 1 286 1 321 1.77e-90 282
Msa0716620 AT1G19540.1 45.455 319 127 5 298 580 3 310 2.50e-82 260
Msa0716620 AT1G19540.1 44.969 318 128 5 5 286 3 309 1.68e-80 256
Msa0716620 AT1G19540.2 49.421 259 116 4 298 552 3 250 3.18e-74 238
Msa0716620 AT1G19540.2 48.649 259 118 4 5 259 3 250 8.70e-73 234
Msa0716620 AT1G32100.1 38.006 321 150 5 297 580 9 317 3.37e-65 216
Msa0716620 AT1G32100.1 37.695 321 151 5 4 287 9 317 3.74e-65 216
Msa0716620 AT4G13660.1 38.629 321 148 5 297 580 9 317 2.60e-64 213
Msa0716620 AT4G13660.1 38.125 320 149 5 4 286 9 316 9.79e-64 212
Msa0716620 AT4G13660.2 38.629 321 148 5 297 580 9 317 2.60e-64 213
Msa0716620 AT4G13660.2 38.125 320 149 5 4 286 9 316 9.79e-64 212
Msa0716620 AT4G34540.1 33.861 316 161 2 4 287 7 306 1.13e-62 209
Msa0716620 AT4G34540.1 33.544 316 162 2 297 580 7 306 1.03e-61 206

Find 129 sgRNAs with CRISPR-Local

Find 685 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGCTCTTCCTTGGTTTC+AGG 0.162720 5_1:+10105099 None:intergenic
ATAAGCTCTTCCTTGGTTTC+AGG 0.170156 5_1:+10096488 None:intergenic
AAAGAGCAATAACCTCATTT+TGG 0.179311 5_1:+10104252 None:intergenic
CCTTTGTTGCCACGCCTTTA+CGG 0.184750 5_1:-10104563 Msa0716620:CDS
AAAGGGCAATGACCTCATTT+TGG 0.186033 5_1:+10095633 None:intergenic
CGGGACAAAGTTGTCATTCT+TGG 0.251205 5_1:-10095873 Msa0716620:CDS
CGGGACAAAGTTGTCATTCT+TGG 0.251205 5_1:-10104493 Msa0716620:CDS
ATTGATAATTACCAATCTTT+AGG 0.253564 5_1:-10096467 Msa0716620:CDS
TTCAGAAGCTTCAATATCTT+TGG 0.254251 5_1:+10095222 None:intergenic
TTCAGAAGCTTCAATATCTT+TGG 0.254251 5_1:+10103841 None:intergenic
ATTGACAATTACCAATCTTT+AGG 0.260595 5_1:-10105078 Msa0716620:CDS
AAAATGAGGTTATTGCTCTT+TGG 0.277659 5_1:-10104250 Msa0716620:CDS
CTTTGTTGCCACGCCTTTAC+CGG 0.290435 5_1:-10095942 Msa0716620:CDS
AATTCTTGGGGAGTCTAATA+TGG 0.296473 5_1:+10104282 None:intergenic
AAATGAGGTTATTGCTCTTT+GGG 0.307200 5_1:-10104249 Msa0716620:CDS
CTTTGTTGCCACGCCTTTAC+GGG 0.310036 5_1:-10104562 Msa0716620:CDS
CCATTGGAAGACACATAGTT+TGG 0.324909 5_1:-10105212 Msa0716620:CDS
AAATGAGGTCATTGCCCTTT+GGG 0.330250 5_1:-10095630 Msa0716620:CDS
CTATTGGAAGACACATAGTT+TGG 0.363124 5_1:-10096601 Msa0716620:CDS
GGGATCATTTGCTGCTCTAA+TGG 0.371239 5_1:+10095706 None:intergenic
GGGATCATTTGCTGCTCTAA+TGG 0.371239 5_1:+10104325 None:intergenic
TTAGCAGCTGTAATAAGCTT+TGG 0.390009 5_1:+10096512 None:intergenic
TTAGCAGCTGTAATAAGCTT+TGG 0.390009 5_1:+10105123 None:intergenic
CTAGGACCAACAGGAGCTAT+TGG 0.396755 5_1:-10096617 Msa0716620:CDS
AAAATGAGGTCATTGCCCTT+TGG 0.397487 5_1:-10095631 Msa0716620:CDS
CTTCGGATTCAATTACTCTT+CGG 0.415537 5_1:+10104602 None:intergenic
CGGTTACTTCTTACGTAACT+TGG 0.420584 5_1:-10095922 Msa0716620:CDS
AGGAAATCCAACATATGCTT+TGG 0.425743 5_1:-10096564 Msa0716620:CDS
AGGAAATCCAACATATGCTT+TGG 0.425743 5_1:-10105175 Msa0716620:CDS
CTTCGGCTTCAATTACTCTT+CGG 0.426997 5_1:+10095982 None:intergenic
ATCCTCATCCTAGGACCAAC+AGG 0.432495 5_1:-10096626 Msa0716620:CDS
ATCCTCATCCTAGGACCAAC+AGG 0.432495 5_1:-10105237 Msa0716620:CDS
CAATGGCTCCTGTTGGTCCT+AGG 0.437873 5_1:+10105229 None:intergenic
ATTAAAGCAATTAAAGAAGC+TGG 0.439051 5_1:-10096243 Msa0716620:CDS
ATTAAAGCAATTAAAGAAGC+TGG 0.439051 5_1:-10104858 Msa0716620:CDS
TTTGGCTTGTTAACATTGCC+AGG 0.439374 5_1:+10096530 None:intergenic
TTTGGCTTGTTAACATTGCC+AGG 0.439374 5_1:+10105141 None:intergenic
GTAGAATAACTCCTAAAGAT+TGG 0.448622 5_1:+10096456 None:intergenic
GTAGAATAACTCCTAAAGAT+TGG 0.448622 5_1:+10105067 None:intergenic
ATTATCAATAAGCTCTTCCT+TGG 0.453266 5_1:+10096481 None:intergenic
CAATAGCTCCTGTTGGTCCT+AGG 0.454369 5_1:+10096618 None:intergenic
TGATCATGAAACTCTTGTTA+AGG 0.455304 5_1:-10096334 Msa0716620:CDS
TGATCATGAAACTCTTGTTA+AGG 0.455304 5_1:-10104949 Msa0716620:CDS
TTTCTTCTTAATAGTTTCAC+AGG 0.455360 5_1:-10103723 Msa0716620:intron
TTTCTAACCAAAGCATATGT+TGG 0.458494 5_1:+10096557 None:intergenic
TTTCTAACCAAAGCATATGT+TGG 0.458494 5_1:+10105168 None:intergenic
GAAGCTTCAATATCTTTGGC+TGG 0.462307 5_1:+10095226 None:intergenic
GAAGCTTCAATATCTTTGGC+TGG 0.462307 5_1:+10103845 None:intergenic
TAAAGAAGCTGGAAACGTTA+AGG 0.465104 5_1:-10096232 Msa0716620:intron
TAAAGAAGCTGGAAACGTTA+AGG 0.465104 5_1:-10104847 Msa0716620:intron
ACAGCTTTGTTCAATGTGTT+GGG 0.466334 5_1:+10095686 None:intergenic
ACAGCTTTGTTCAATGTGTT+GGG 0.466334 5_1:+10104305 None:intergenic
CAAGTTACGTAAGAAGTAAC+CGG 0.467564 5_1:+10095923 None:intergenic
CATTGGAAGACACATAGTTT+GGG 0.475312 5_1:-10105211 Msa0716620:CDS
AAAGTTGTCATTCTTGGAGA+TGG 0.476919 5_1:-10095867 Msa0716620:CDS
AAAGTTGTCATTCTTGGAGA+TGG 0.476919 5_1:-10104487 Msa0716620:CDS
GACAGCTTTGTTCAATGTGT+TGG 0.480648 5_1:+10095685 None:intergenic
GACAGCTTTGTTCAATGTGT+TGG 0.480648 5_1:+10104304 None:intergenic
TATTGGAAGACACATAGTTT+GGG 0.481038 5_1:-10096600 Msa0716620:CDS
ATTGTCAATAAGCTCTTCCT+TGG 0.481411 5_1:+10105092 None:intergenic
TAGACTACTAATTGAGGATC+AGG 0.481816 5_1:-10096274 Msa0716620:CDS
TAGACTACTAATTGAAGATC+AGG 0.483235 5_1:-10104889 Msa0716620:CDS
GAAAACAAAATCCTCATCCT+AGG 0.488477 5_1:-10096635 Msa0716620:CDS
GAAAACAAAATCCTCATCCT+AGG 0.488477 5_1:-10105246 Msa0716620:CDS
CTCCTGTTGGTCCTAGGATG+AGG 0.489729 5_1:+10105235 None:intergenic
ACGTAAGAAGTAACCGGTAA+AGG 0.493799 5_1:+10095929 None:intergenic
GACATTGTGATCTGTGCTGC+TGG 0.497025 5_1:-10096297 Msa0716620:CDS
AAATTATTTGACCCAAAATG+AGG 0.510766 5_1:-10095645 Msa0716620:CDS
GCAGTGGTGTATGTCACATC+AGG 0.513062 5_1:+10095193 None:intergenic
GCAGTGGTGTATGTCACATC+AGG 0.513062 5_1:+10103812 None:intergenic
GGGTTACTTCTTACGTAACT+TGG 0.518462 5_1:-10104542 Msa0716620:CDS
CGGTAAAGGCGTGGCAACAA+AGG 0.521509 5_1:+10095943 None:intergenic
CGACGCAACTGATCCTCCTC+GGG 0.522740 5_1:-10095892 Msa0716620:CDS
CGACGCAACTGATCCTCCTC+GGG 0.522740 5_1:-10104512 Msa0716620:CDS
TGAGAAAACTTATGTTTCAG+AGG 0.523834 5_1:-10095585 Msa0716620:CDS
TGAGAAAACTTATGTTTCAG+AGG 0.523834 5_1:-10104204 Msa0716620:CDS
GAATTATTTGACCCAAAATG+AGG 0.524380 5_1:-10104264 Msa0716620:CDS
CTAGGACCAACAGGAGCCAT+TGG 0.526005 5_1:-10105228 Msa0716620:CDS
CTCCTGTTGGTCCTAGGATG+AGG 0.526748 5_1:+10096624 None:intergenic
GATATTGTGATCTGTGCTGC+TGG 0.528420 5_1:-10104912 Msa0716620:CDS
CCGTAAAGGCGTGGCAACAA+AGG 0.531019 5_1:+10104563 None:intergenic
AACTTGTCTAACTGGCTCAA+CGG 0.536329 5_1:+10096025 None:intergenic
GTAAGTGTAAGGAACTCCTT+CGG 0.541959 5_1:+10104585 None:intergenic
AGCTGCTAATCCTGAAACCA+AGG 0.544614 5_1:-10096498 Msa0716620:CDS
AGCTGCTAATCCTGAAACCA+AGG 0.544614 5_1:-10105109 Msa0716620:CDS
GTTTGGGCAAGTATTAAAGC+AGG 0.544920 5_1:-10096584 Msa0716620:CDS
GTTTGGGCAAGTATTAAAGC+AGG 0.544920 5_1:-10105195 Msa0716620:CDS
GTAAGTGTAAGGAACTCCTT+CGG 0.556646 5_1:+10095965 None:intergenic
CTTGGAGATGGAAATGTGAA+AGG 0.559099 5_1:-10095855 Msa0716620:intron
CTTGGAGATGGAAATGTGAA+AGG 0.559099 5_1:-10104475 Msa0716620:intron
TTATGTAACTGAGGCTGATG+TGG 0.559412 5_1:-10095738 Msa0716620:CDS
TTATGTAACTGAGGCTGATG+TGG 0.559412 5_1:-10104357 Msa0716620:CDS
CCAAACTATGTGTCTTCCAA+TGG 0.559467 5_1:+10105212 None:intergenic
ACGTAAGAAGTAACCCGTAA+AGG 0.560505 5_1:+10104549 None:intergenic
TGTCTTCCAATGGCTCCTGT+TGG 0.561834 5_1:+10105222 None:intergenic
ACGTCTAGCCCAAATTCAGA+TGG 0.563905 5_1:+10096062 None:intergenic
ACGTCTAGCCCAAATTCAGA+TGG 0.563905 5_1:+10104682 None:intergenic
TGGCAACAAAGGTAAGTGTA+AGG 0.564377 5_1:+10095954 None:intergenic
TGGCAACAAAGGTAAGTGTA+AGG 0.564377 5_1:+10104574 None:intergenic
TGTCTTCCAATAGCTCCTGT+TGG 0.572016 5_1:+10096611 None:intergenic
TTCAGGAGCTTATGTAACTG+AGG 0.576478 5_1:-10095747 Msa0716620:intron
TTCAGGAGCTTATGTAACTG+AGG 0.576478 5_1:-10104366 Msa0716620:intron
GGTGTATGTCACATCAGGAT+AGG 0.580667 5_1:+10095198 None:intergenic
GGTGTATGTCACATCAGGAT+AGG 0.580667 5_1:+10103817 None:intergenic
TCGACGCAACTGATCCTCCT+CGG 0.582325 5_1:-10095893 Msa0716620:CDS
TCGACGCAACTGATCCTCCT+CGG 0.582325 5_1:-10104513 Msa0716620:CDS
ATCTGAATTTGGGCTAGACG+TGG 0.583561 5_1:-10096060 Msa0716620:CDS
ATCTGAATTTGGGCTAGACG+TGG 0.583561 5_1:-10104680 Msa0716620:CDS
TGCTGGTAGACTACTAATTG+AGG 0.589907 5_1:-10096280 Msa0716620:CDS
TTTGGGTCAAATAATTCTTG+GGG 0.592555 5_1:+10104270 None:intergenic
CACACACTCACTACTACTTG+TGG 0.607486 5_1:-10105367 Msa0716620:five_prime_UTR
ATTCAAATATTCATCAGCAG+TGG 0.611923 5_1:+10095177 None:intergenic
ATTCAAATATTCATCAGCAG+TGG 0.611923 5_1:+10103796 None:intergenic
CGTCTAGCCCAAATTCAGAT+GGG 0.623219 5_1:+10096063 None:intergenic
CGTCTAGCCCAAATTCAGAT+GGG 0.623219 5_1:+10104683 None:intergenic
GCTAGACGTGGACCGTCATG+TGG 0.630053 5_1:-10096048 Msa0716620:CDS
AGAAGTAACCGGTAAAGGCG+TGG 0.632726 5_1:+10095934 None:intergenic
AGAAGTAACCCGTAAAGGCG+TGG 0.632726 5_1:+10104554 None:intergenic
CGAAGAGTAATTGAATCCGA+AGG 0.633822 5_1:-10104601 Msa0716620:CDS
GCTAGACGTGGACCGTCATG+AGG 0.637128 5_1:-10104668 Msa0716620:CDS
TATGTAACTGAGGCTGATGT+GGG 0.645622 5_1:-10095737 Msa0716620:CDS
TATGTAACTGAGGCTGATGT+GGG 0.645622 5_1:-10104356 Msa0716620:CDS
CGAAGAGTAATTGAAGCCGA+AGG 0.653960 5_1:-10095981 Msa0716620:CDS
CTGGCTCAACTGCCTCATGA+CGG 0.663026 5_1:+10104656 None:intergenic
CTGGCTCAACGGCCACATGA+CGG 0.665112 5_1:+10096036 None:intergenic
ATGACAACTTTGTCCCGAGG+AGG 0.669433 5_1:+10095879 None:intergenic
ATGACAACTTTGTCCCGAGG+AGG 0.669433 5_1:+10104499 None:intergenic
AGAATGACAACTTTGTCCCG+AGG 0.692025 5_1:+10095876 None:intergenic
AGAATGACAACTTTGTCCCG+AGG 0.692025 5_1:+10104496 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTTTTTTATTTAAA+TGG - chr5_1:10101106-10101125 Msa0716620:intron 0.0%
!!! TATATTTTTTTTATTTAAAT+GGG - chr5_1:10101107-10101126 Msa0716620:intron 0.0%
!!! AAATAATATTGTCTTTTTTT+TGG - chr5_1:10097169-10097188 Msa0716620:intron 10.0%
!! CAAAAAATATTCTTAAAAAT+GGG + chr5_1:10098103-10098122 None:intergenic 10.0%
!! ATATAATATGATTTGAATTA+CGG - chr5_1:10098446-10098465 Msa0716620:intron 10.0%
!! ATATATTAAATAATCATGTT+CGG - chr5_1:10098725-10098744 Msa0716620:intron 10.0%
!! TGAATAAATAAAAACTAAAA+CGG + chr5_1:10099002-10099021 None:intergenic 10.0%
!!! AAACATACTTTTTAAATTAT+TGG - chr5_1:10099412-10099431 Msa0716620:intron 10.0%
!! ACTATTATAAAATTAAACTA+TGG - chr5_1:10099833-10099852 Msa0716620:intron 10.0%
!!! TATTAGACTTAATTTTTTTT+AGG - chr5_1:10101137-10101156 Msa0716620:intron 10.0%
!! ATTAGTTAAAGAAAAATAAA+AGG + chr5_1:10103121-10103140 None:intergenic 10.0%
!!! TATTTTTTATTTAACTTTCT+AGG - chr5_1:10103265-10103284 Msa0716620:intron 10.0%
!!! ATATACATATAACTTTTTTA+AGG + chr5_1:10103443-10103462 None:intergenic 10.0%
!! TGTAAAATATTACATCAATT+GGG + chr5_1:10096894-10096913 None:intergenic 15.0%
!! TTGTAAAATATTACATCAAT+TGG + chr5_1:10096895-10096914 None:intergenic 15.0%
!! TCAATCATCTTAAAAAATAT+CGG + chr5_1:10097150-10097169 None:intergenic 15.0%
!! ATGATAAACTGTAAAATTAT+TGG - chr5_1:10097394-10097413 Msa0716620:intron 15.0%
!! GCAAAAAATATTCTTAAAAA+TGG + chr5_1:10098104-10098123 None:intergenic 15.0%
!!! TTTTAAGAATATTTTTTGCA+CGG - chr5_1:10098105-10098124 Msa0716620:intron 15.0%
!! TATAATATGATTTGAATTAC+GGG - chr5_1:10098447-10098466 Msa0716620:intron 15.0%
!!! ATTCAAATCATTTTTTTTAG+TGG + chr5_1:10098641-10098660 None:intergenic 15.0%
!! AAAAAAATGATTTGAATTTG+TGG - chr5_1:10098644-10098663 Msa0716620:intron 15.0%
!! TATATTAAATAATCATGTTC+GGG - chr5_1:10098726-10098745 Msa0716620:intron 15.0%
!! GAATAAATAAAAACTAAAAC+GGG + chr5_1:10099001-10099020 None:intergenic 15.0%
!!! ACTTTAGAATTTTAAAACTT+TGG - chr5_1:10099188-10099207 Msa0716620:intron 15.0%
!!! CTTTAGAATTTTAAAACTTT+GGG - chr5_1:10099189-10099208 Msa0716620:intron 15.0%
!! ACAAGTAAACTTAATAAAAA+TGG + chr5_1:10099225-10099244 None:intergenic 15.0%
!! CATTGAATAATTAATGTATT+TGG + chr5_1:10099468-10099487 None:intergenic 15.0%
!! ACATAATAAGTTCAAAATTT+AGG - chr5_1:10099924-10099943 Msa0716620:intron 15.0%
!!! TCAAATTATTTTCACATTTT+AGG - chr5_1:10100127-10100146 Msa0716620:intron 15.0%
!!! TTAATTATTATCCACATTTT+AGG - chr5_1:10100175-10100194 Msa0716620:intron 15.0%
!!! ATTTTTTTATATTTCGTTTC+AGG + chr5_1:10100840-10100859 None:intergenic 15.0%
!! TTTGTATTAATCAGTTAATT+TGG + chr5_1:10100986-10101005 None:intergenic 15.0%
!! TTAACTGATTAATACAAATT+AGG - chr5_1:10100988-10101007 Msa0716620:intron 15.0%
!! TAACTGATTAATACAAATTA+GGG - chr5_1:10100989-10101008 Msa0716620:intron 15.0%
!!! ATATTAGTTTATTTTGATTG+CGG - chr5_1:10102798-10102817 Msa0716620:intron 15.0%
!!! TTTTCTTGAATTTTTCATTA+TGG + chr5_1:10102871-10102890 None:intergenic 15.0%
!! ACAACAATGAATATTAAATT+TGG - chr5_1:10103681-10103700 Msa0716620:intron 15.0%
!!! ATACTTTGTTTGATATTTAT+AGG + chr5_1:10103765-10103784 None:intergenic 15.0%
!!! ATTTGCCTTAATTTTTTTTC+AGG - chr5_1:10096151-10096170 Msa0716620:intron 20.0%
!! TATCAACAATGATTGATTAA+CGG + chr5_1:10096425-10096444 None:intergenic 20.0%
!! TATCATTCACAACAAATAAA+AGG - chr5_1:10096644-10096663 Msa0716620:CDS 20.0%
!! TTATTAATAACAAGACAACA+AGG + chr5_1:10096866-10096885 None:intergenic 20.0%
!! ACAAAACATTAAGGATATAT+TGG + chr5_1:10097423-10097442 None:intergenic 20.0%
!!! TATCCTTAATGTTTTGTATA+AGG - chr5_1:10097426-10097445 Msa0716620:intron 20.0%
!! CATATTATATGCAGATTAAT+TGG + chr5_1:10098436-10098455 None:intergenic 20.0%
!! ATATATTTCAATTGTCTACA+CGG + chr5_1:10098711-10098730 None:intergenic 20.0%
!! TTTGCTAAAATATGATTAGA+TGG - chr5_1:10099073-10099092 Msa0716620:intron 20.0%
!!! TTTTTTCTTATAAATGTGAC+CGG + chr5_1:10099395-10099414 None:intergenic 20.0%
!!! AAAAAAGTTCAAGTTCATTT+TGG - chr5_1:10099545-10099564 Msa0716620:intron 20.0%
!!! AAAAAGTTCAAGTTCATTTT+GGG - chr5_1:10099546-10099565 Msa0716620:intron 20.0%
!!! AAATTAAACTATGGTGTTAA+AGG - chr5_1:10099842-10099861 Msa0716620:intron 20.0%
!!! AATTAAACTATGGTGTTAAA+GGG - chr5_1:10099843-10099862 Msa0716620:intron 20.0%
!! TTAAATGTTTACTTCTTTGT+TGG - chr5_1:10099969-10099988 Msa0716620:intron 20.0%
!! TTTCTATAATTTGGCTAATT+TGG + chr5_1:10100268-10100287 None:intergenic 20.0%
!! TTTACTTATTTGCAAATTGA+AGG + chr5_1:10100496-10100515 None:intergenic 20.0%
!! TTTGCAAATAAGTAAAAGTA+TGG - chr5_1:10100500-10100519 Msa0716620:intron 20.0%
!! TGTATAAAAGAAATCCAATT+TGG - chr5_1:10100577-10100596 Msa0716620:intron 20.0%
!! CTTAAAATTTCATGTTTGAA+TGG - chr5_1:10100622-10100641 Msa0716620:intron 20.0%
!! AAAAAAATTAAGTGAAAGAG+AGG - chr5_1:10100852-10100871 Msa0716620:intron 20.0%
!! AACTGATTAATACAAATTAG+GGG - chr5_1:10100990-10101009 Msa0716620:intron 20.0%
!! ATTTGTAAGAAACTCATTTA+TGG - chr5_1:10101592-10101611 Msa0716620:intron 20.0%
!! TTTGTAAGAAACTCATTTAT+GGG - chr5_1:10101593-10101612 Msa0716620:intron 20.0%
!! TAAATGTTTAACTCCATATT+TGG - chr5_1:10101854-10101873 Msa0716620:intron 20.0%
!! TTGACTAAAAAAAATTGCAA+CGG + chr5_1:10101881-10101900 None:intergenic 20.0%
!!! GTTTTTATCAAAATCAATGA+AGG + chr5_1:10101998-10102017 None:intergenic 20.0%
!! TTATTGTTCTTGAAATATGT+GGG + chr5_1:10102020-10102039 None:intergenic 20.0%
!! TTTATTGTTCTTGAAATATG+TGG + chr5_1:10102021-10102040 None:intergenic 20.0%
!!! TCACAATAGAGTATTATTTT+AGG - chr5_1:10102141-10102160 Msa0716620:intron 20.0%
!!! CACAATAGAGTATTATTTTA+GGG - chr5_1:10102142-10102161 Msa0716620:intron 20.0%
!! TAACGATATTATTCAAGAAA+AGG - chr5_1:10102978-10102997 Msa0716620:intron 20.0%
!! TTTAATTATCGGATGTTAAT+CGG + chr5_1:10103156-10103175 None:intergenic 20.0%
!!! GACTACTAATATGTTTTATA+CGG - chr5_1:10103596-10103615 Msa0716620:intron 20.0%
!!! TACTAGTTATTTTTTTCCAA+TGG - chr5_1:10103871-10103890 Msa0716620:intron 20.0%
!!! ATTGATAATTACCAATCTTT+AGG - chr5_1:10104067-10104086 Msa0716620:intron 20.0%
!! ACTTATTTGAACTTATTTAC+TGG + chr5_1:10104348-10104367 None:intergenic 20.0%
!!! ATTTGCCTTAATTTTTTTTC+AGG - chr5_1:10096151-10096170 Msa0716620:intron 20.0%
!!! TTTTGGGTCAAATAATTTTT+GGG + chr5_1:10104887-10104906 None:intergenic 20.0%
!!! ATTTTGGGTCAAATAATTTT+TGG + chr5_1:10104888-10104907 None:intergenic 20.0%
!!! ATTGTTAAGAATTTTTACAC+CGG - chr5_1:10105022-10105041 Msa0716620:intron 20.0%
! AAAAAACAAGTGTGTTTATG+TGG + chr5_1:10095228-10095247 None:intergenic 25.0%
!!! CTAAAGTTACTTTTTTCCAA+TGG - chr5_1:10095260-10095279 Msa0716620:intron 25.0%
! ATTGACAATTACCAATCTTT+AGG - chr5_1:10095456-10095475 Msa0716620:intron 25.0%
! ATTAAAGCAATTAAAGAAGC+TGG - chr5_1:10095676-10095695 Msa0716620:CDS 25.0%
!! AAATTTTTCCCATCTGAATT+TGG - chr5_1:10095843-10095862 Msa0716620:intron 25.0%
!! AATTTTTCCCATCTGAATTT+GGG - chr5_1:10095844-10095863 Msa0716620:intron 25.0%
! AAGCTCCTGAAAAAAAATTA+AGG + chr5_1:10096159-10096178 None:intergenic 25.0%
!!! TTTTGGGTCAAATAATTCTT+GGG + chr5_1:10096268-10096287 None:intergenic 25.0%
!!! ATTTTGGGTCAAATAATTCT+TGG + chr5_1:10096269-10096288 None:intergenic 25.0%
! TTTCTTCTTAATAGTTTCAC+AGG - chr5_1:10096811-10096830 Msa0716620:intron 25.0%
! TAAGTAACATACAATTGATG+TGG + chr5_1:10096842-10096861 None:intergenic 25.0%
! AAATATTACATCAATTGGGA+AGG + chr5_1:10096890-10096909 None:intergenic 25.0%
! AAAAGAAAGCAAGAAACAAA+AGG - chr5_1:10097217-10097236 Msa0716620:intron 25.0%
! AGTCCTTATACAAAACATTA+AGG + chr5_1:10097432-10097451 None:intergenic 25.0%
! TTGATGTAGTCTTCAATATT+GGG - chr5_1:10097903-10097922 Msa0716620:intron 25.0%
! AAGATCATGAATATCTATGA+TGG - chr5_1:10097995-10098014 Msa0716620:intron 25.0%
! AGATCATGAATATCTATGAT+GGG - chr5_1:10097996-10098015 Msa0716620:intron 25.0%
!!! AATATTTTTTGCACGGATAA+TGG - chr5_1:10098112-10098131 Msa0716620:intron 25.0%
! CCAATCAAAAAATAAGCTTT+GGG + chr5_1:10098222-10098241 None:intergenic 25.0%
! TCCAATCAAAAAATAAGCTT+TGG + chr5_1:10098223-10098242 None:intergenic 25.0%
!! TCTTCTTAGAAAACTTGTTT+GGG + chr5_1:10098252-10098271 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG - chr5_1:10098593-10098612 Msa0716620:intron 25.0%
!!! CAAATCATTTTTTTTAGTGG+TGG + chr5_1:10098638-10098657 None:intergenic 25.0%
!!! TTACTTGTAGAGGTATTAAA+TGG - chr5_1:10098755-10098774 Msa0716620:intron 25.0%
! AAATAAAAACTAAAACGGGT+CGG + chr5_1:10098997-10099016 None:intergenic 25.0%
! CAGAAATATTTATAGTAGAC+CGG - chr5_1:10099320-10099339 Msa0716620:intron 25.0%
!!! GAAACTAGAAAGTAGTTTTT+TGG - chr5_1:10099487-10099506 Msa0716620:intron 25.0%
!!! TTTTTGGTTATAAATGTGAC+CGG - chr5_1:10099503-10099522 Msa0716620:intron 25.0%
! ACATATTTAGAAATGTTTGG+AGG - chr5_1:10099993-10100012 Msa0716620:intron 25.0%
!!! TTAAGATTTTGATGGTCTAA+AGG + chr5_1:10100205-10100224 None:intergenic 25.0%
! GACCATCAAAATCTTAAAAA+CGG - chr5_1:10100208-10100227 Msa0716620:intron 25.0%
! ACCATCAAAATCTTAAAAAC+GGG - chr5_1:10100209-10100228 Msa0716620:intron 25.0%
! GCATAATGGTTTCTATAATT+TGG + chr5_1:10100277-10100296 None:intergenic 25.0%
! TAAAAACTACTCTTACCTAA+CGG + chr5_1:10100316-10100335 None:intergenic 25.0%
!! ATTTCATTTAGCTTCTAAAG+AGG - chr5_1:10100339-10100358 Msa0716620:intron 25.0%
!! TTTCATTTAGCTTCTAAAGA+GGG - chr5_1:10100340-10100359 Msa0716620:intron 25.0%
! GGCTTAATTAATTACGTATT+TGG - chr5_1:10100521-10100540 Msa0716620:intron 25.0%
! AACAATGTTAATAGCCAAAT+TGG + chr5_1:10100594-10100613 None:intergenic 25.0%
! ATGTTTGAATGGTGAAAAAA+TGG - chr5_1:10100633-10100652 Msa0716620:intron 25.0%
!!! CTATTTTAAAAAGAGAACCA+AGG + chr5_1:10100741-10100760 None:intergenic 25.0%
!!! CTTGGTTCTCTTTTTAAAAT+AGG - chr5_1:10100739-10100758 Msa0716620:intron 25.0%
!! AAATTGCGTTTTTACTTTAC+TGG + chr5_1:10100767-10100786 None:intergenic 25.0%
!!! TTCACTTTTCTCATTTTTTG+TGG - chr5_1:10101348-10101367 Msa0716620:intron 25.0%
! GGAATAAACACATCAAAATT+TGG + chr5_1:10101655-10101674 None:intergenic 25.0%
!!! TTCTTGTTGGTTTTAACAAA+AGG - chr5_1:10101812-10101831 Msa0716620:intron 25.0%
! TGACTAAAAAAAATTGCAAC+GGG + chr5_1:10101880-10101899 None:intergenic 25.0%
! CTCTTTGGATTTAATAAGAA+GGG + chr5_1:10101961-10101980 None:intergenic 25.0%
! TCTCTTTGGATTTAATAAGA+AGG + chr5_1:10101962-10101981 None:intergenic 25.0%
! AATTACAAGAGTTGAATAAC+AGG - chr5_1:10102196-10102215 Msa0716620:intron 25.0%
!! GTTGATAAATTCTTCAAACA+TGG + chr5_1:10102412-10102431 None:intergenic 25.0%
! ATCAATCAAGAAGTAATCTT+TGG + chr5_1:10102476-10102495 None:intergenic 25.0%
! ACATGACTGTTTATATAGAA+AGG - chr5_1:10102619-10102638 Msa0716620:intron 25.0%
! CATGACTGTTTATATAGAAA+GGG - chr5_1:10102620-10102639 Msa0716620:intron 25.0%
! GAAATCATCAATAATTGACT+CGG + chr5_1:10102667-10102686 None:intergenic 25.0%
! GTTAGGTGGTATTTAATTAT+CGG + chr5_1:10103167-10103186 None:intergenic 25.0%
! TCTTTGTAATTGTTGATGTT+AGG + chr5_1:10103184-10103203 None:intergenic 25.0%
! GTTAAAAAGTTGTGAAGTAA+AGG - chr5_1:10103393-10103412 Msa0716620:intron 25.0%
! AATTAAGTAGACTTAAGAGA+AGG - chr5_1:10103623-10103642 Msa0716620:intron 25.0%
! TGATATTTATAGGACTAACT+TGG + chr5_1:10103755-10103774 None:intergenic 25.0%
! ATTAAAGCAATTAAAGAAGC+TGG - chr5_1:10095676-10095695 Msa0716620:CDS 25.0%
! AGTTAGTAATAACTCTTTGA+TGG - chr5_1:10104386-10104405 Msa0716620:intron 25.0%
!! AAATTTTTCCCATCTGAATT+TGG - chr5_1:10095843-10095862 Msa0716620:intron 25.0%
!! AATTTTTCCCATCTGAATTT+GGG - chr5_1:10095844-10095863 Msa0716620:intron 25.0%
! AAGCTCCTGAAAAAAAATTA+AGG + chr5_1:10096159-10096178 None:intergenic 25.0%
!! TTTGGGTCAAATAATTTTTG+GGG + chr5_1:10104886-10104905 None:intergenic 25.0%
! AAATTATTTGACCCAAAATG+AGG - chr5_1:10104889-10104908 Msa0716620:CDS 25.0%
! TATCAACTATGATTGATTAC+CGG + chr5_1:10105044-10105063 None:intergenic 25.0%
! TACCATTCACAACAAATAAA+AGG - chr5_1:10105263-10105282 Msa0716620:exon 25.0%
!!! ATTTTGTTTTCAGTTGCCAT+TGG + chr5_1:10095279-10095298 None:intergenic 30.0%
TTTCTAACCAAAGCATATGT+TGG + chr5_1:10095369-10095388 None:intergenic 30.0%
GTAGAATAACTCCTAAAGAT+TGG + chr5_1:10095470-10095489 None:intergenic 30.0%
TGATCATGAAACTCTTGTTA+AGG - chr5_1:10095585-10095604 Msa0716620:CDS 30.0%
TAGACTACTAATTGAAGATC+AGG - chr5_1:10095645-10095664 Msa0716620:CDS 30.0%
! GAGTTATTACTAAGAGTGTA+TGG + chr5_1:10095760-10095779 None:intergenic 30.0%
TTGCTCGTTATATTGAATGT+TGG - chr5_1:10095797-10095816 Msa0716620:intron 30.0%
TCTTCAAAAACTTGTCTAAC+TGG + chr5_1:10095900-10095919 None:intergenic 30.0%
TTTGGGTCAAATAATTCTTG+GGG + chr5_1:10096267-10096286 None:intergenic 30.0%
GAATTATTTGACCCAAAATG+AGG - chr5_1:10096270-10096289 Msa0716620:CDS 30.0%
! AAGAGCAATAACCTCATTTT+GGG + chr5_1:10096284-10096303 None:intergenic 30.0%
! AAAGAGCAATAACCTCATTT+TGG + chr5_1:10096285-10096304 None:intergenic 30.0%
AAAATGAGGTTATTGCTCTT+TGG - chr5_1:10096284-10096303 Msa0716620:CDS 30.0%
AAATGAGGTTATTGCTCTTT+GGG - chr5_1:10096285-10096304 Msa0716620:CDS 30.0%
TGAGAAAACTTATGTTTCAG+AGG - chr5_1:10096330-10096349 Msa0716620:CDS 30.0%
CAAGTTCTCAAAGATATTCA+AGG - chr5_1:10096355-10096374 Msa0716620:intron 30.0%
ATTCCCTCATAACTATTTGT+TGG - chr5_1:10096616-10096635 Msa0716620:CDS 30.0%
ATGCCAACAAATAGTTATGA+GGG + chr5_1:10096622-10096641 None:intergenic 30.0%
AATGCCAACAAATAGTTATG+AGG + chr5_1:10096623-10096642 None:intergenic 30.0%
TTCAGAAGCTTCAATATCTT+TGG + chr5_1:10096696-10096715 None:intergenic 30.0%
ATTCAAATATTCATCAGCAG+TGG + chr5_1:10096741-10096760 None:intergenic 30.0%
! TTTGTCTAAGTTTGTTCTCA+CGG - chr5_1:10096764-10096783 Msa0716620:intron 30.0%
! AATTATTTAAAACCCACGTC+AGG - chr5_1:10097029-10097048 Msa0716620:intron 30.0%
ATTGCTTCATATGGTAAGAT+CGG + chr5_1:10097060-10097079 None:intergenic 30.0%
TTACCATATGAAGCAATGTT+TGG - chr5_1:10097063-10097082 Msa0716620:intron 30.0%
TACCATATGAAGCAATGTTT+GGG - chr5_1:10097064-10097083 Msa0716620:intron 30.0%
CAAGAAACAAAAGGAAAACT+AGG - chr5_1:10097226-10097245 Msa0716620:intron 30.0%
TTGATTTCATGGCAAAGTTA+GGG + chr5_1:10097349-10097368 None:intergenic 30.0%
!! TAACCAAAGTGTTGATTTCA+TGG + chr5_1:10097360-10097379 None:intergenic 30.0%
TCTCCATTAATCTCATAAAG+GGG + chr5_1:10097481-10097500 None:intergenic 30.0%
CTCTCCATTAATCTCATAAA+GGG + chr5_1:10097482-10097501 None:intergenic 30.0%
GAACTAACAACAATCTATCA+CGG + chr5_1:10097563-10097582 None:intergenic 30.0%
CAACAAAATGTCTTCTGAAT+GGG - chr5_1:10097586-10097605 Msa0716620:intron 30.0%
GTGCTTATTCTACAAAAAGT+GGG + chr5_1:10097818-10097837 None:intergenic 30.0%
TTATGGTCACACAACAAAAA+TGG + chr5_1:10097840-10097859 None:intergenic 30.0%
GTTGATGTAGTCTTCAATAT+TGG - chr5_1:10097902-10097921 Msa0716620:intron 30.0%
ATGTGTATGTTGTCCAATAT+TGG - chr5_1:10097947-10097966 Msa0716620:intron 30.0%
TTCTTAAAAATGGGTACACT+TGG + chr5_1:10098094-10098113 None:intergenic 30.0%
!!! CCCAAAGCTTATTTTTTGAT+TGG - chr5_1:10098219-10098238 Msa0716620:intron 30.0%
! TAGAAAACTTGTTTGGGATA+TGG + chr5_1:10098246-10098265 None:intergenic 30.0%
! GTCTTCTTAGAAAACTTGTT+TGG + chr5_1:10098253-10098272 None:intergenic 30.0%
!! TTTTCTAAGAAGACAAGTGT+TGG - chr5_1:10098259-10098278 Msa0716620:intron 30.0%
TACCTCTCCAGATAAAATTA+CGG - chr5_1:10098372-10098391 Msa0716620:intron 30.0%
! AAACTACCCGTAATTTTATC+TGG + chr5_1:10098382-10098401 None:intergenic 30.0%
! ATGCTATCACAAATGTTTTG+AGG - chr5_1:10098407-10098426 Msa0716620:intron 30.0%
GCATAAAAATATGCAAGGTT+CGG - chr5_1:10098598-10098617 Msa0716620:intron 30.0%
CATAAAAATATGCAAGGTTC+GGG - chr5_1:10098599-10098618 Msa0716620:intron 30.0%
ATAAAAATATGCAAGGTTCG+GGG - chr5_1:10098600-10098619 Msa0716620:intron 30.0%
ACCACACAAAAATTATCTGA+CGG - chr5_1:10098672-10098691 Msa0716620:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr5_1:10098810-10098829 Msa0716620:intron 30.0%
AATAAAAACTAAAACGGGTC+GGG + chr5_1:10098996-10099015 None:intergenic 30.0%
!! TTTTGGTTATAAATGTGACC+GGG - chr5_1:10099504-10099523 Msa0716620:intron 30.0%
TGTTCAGTTGACAAATCATT+GGG + chr5_1:10099591-10099610 None:intergenic 30.0%
TTGTTCAGTTGACAAATCAT+TGG + chr5_1:10099592-10099611 None:intergenic 30.0%
! ACAATGTCATTCTTTTGTAC+AGG - chr5_1:10099608-10099627 Msa0716620:intron 30.0%
TTATCTGACAAAGTAGCATA+GGG + chr5_1:10099734-10099753 None:intergenic 30.0%
AGTGAGGATATTTGAGAATT+TGG - chr5_1:10099753-10099772 Msa0716620:intron 30.0%
TTCAACAGTGTATAATACCA+CGG + chr5_1:10099806-10099825 None:intergenic 30.0%
CAATTGTGATGTATATTGTG+AGG - chr5_1:10099887-10099906 Msa0716620:intron 30.0%
! ATGTATATTGTGAGGTTTTG+TGG - chr5_1:10099895-10099914 Msa0716620:intron 30.0%
!! TGTATATTGTGAGGTTTTGT+GGG - chr5_1:10099896-10099915 Msa0716620:intron 30.0%
GGCACATATTTAGAAATGTT+TGG - chr5_1:10099990-10100009 Msa0716620:intron 30.0%
CTAAAGGTAAACCTAAAATG+TGG + chr5_1:10100189-10100208 None:intergenic 30.0%
ATTTGGCTAATTTGGATTGA+AGG + chr5_1:10100260-10100279 None:intergenic 30.0%
! TAACGGTATCATCTTTTCAA+CGG + chr5_1:10100299-10100318 None:intergenic 30.0%
! TTCTAAAGAGGGTTTAAGAA+GGG - chr5_1:10100351-10100370 Msa0716620:intron 30.0%
TTTCTATAAAATAGGAGCCT+TGG - chr5_1:10100721-10100740 Msa0716620:intron 30.0%
TGATTAATACAAATTAGGGG+TGG - chr5_1:10100993-10101012 Msa0716620:intron 30.0%
!!! TTTTTTAGGCCCATAACTTT+TGG - chr5_1:10101151-10101170 Msa0716620:intron 30.0%
!!! TGGGTATTTTTTGTGCATTT+TGG - chr5_1:10101225-10101244 Msa0716620:intron 30.0%
ATCTTAGATGTTAAGAGTTG+AGG - chr5_1:10101407-10101426 Msa0716620:intron 30.0%
TCTTAGATGTTAAGAGTTGA+GGG - chr5_1:10101408-10101427 Msa0716620:intron 30.0%
!! TTTGCGTGAGATTTTTAGAT+TGG - chr5_1:10101433-10101452 Msa0716620:intron 30.0%
AAAACACGTTGTAAACATCT+TGG - chr5_1:10101456-10101475 Msa0716620:intron 30.0%
ATCTTGGAGAATGAAAATCT+TGG - chr5_1:10101472-10101491 Msa0716620:intron 30.0%
TCTTGATCATAGGAAGATAT+TGG - chr5_1:10101499-10101518 Msa0716620:intron 30.0%
CTTGATCATAGGAAGATATT+GGG - chr5_1:10101500-10101519 Msa0716620:intron 30.0%
TTGGGAAATGAGTAGAAATT+AGG - chr5_1:10101518-10101537 Msa0716620:intron 30.0%
! AGTAGAAATTAGGTTGTTCA+GGG - chr5_1:10101528-10101547 Msa0716620:intron 30.0%
! TCTAAGATGTAGGTTATTCT+TGG - chr5_1:10101628-10101647 Msa0716620:intron 30.0%
! GTTAGAATTTCAAGTCTCTT+TGG + chr5_1:10101976-10101995 None:intergenic 30.0%
CTCTTGTAATTGTTTGTCAA+TGG + chr5_1:10102187-10102206 None:intergenic 30.0%
!! TGTTGAAAAGTATTATCCCA+TGG - chr5_1:10102314-10102333 Msa0716620:intron 30.0%
! AGCATAAAAAAAGGAAGTGT+CGG + chr5_1:10102380-10102399 None:intergenic 30.0%
CAATCAGTGAGCATAAAAAA+AGG + chr5_1:10102389-10102408 None:intergenic 30.0%
TCAAGAATTATGCTCATGTT+TGG - chr5_1:10102435-10102454 Msa0716620:intron 30.0%
TGAAAAAGATCTTTCAGTTG+TGG + chr5_1:10102539-10102558 None:intergenic 30.0%
! TCTAAGTTGAGAAACAAGAT+GGG - chr5_1:10102576-10102595 Msa0716620:intron 30.0%
! ATTGATGATTTCAAGTCACT+CGG - chr5_1:10102675-10102694 Msa0716620:intron 30.0%
TTTGATGAACGAAACTGAAA+TGG - chr5_1:10102742-10102761 Msa0716620:intron 30.0%
ATACAACTCCAATACTTGAA+TGG - chr5_1:10102920-10102939 Msa0716620:intron 30.0%
! TTTTGTCTCCATTCAAGTAT+TGG + chr5_1:10102931-10102950 None:intergenic 30.0%
GATGTTAATCGGTATCTTTA+AGG + chr5_1:10103145-10103164 None:intergenic 30.0%
TTGTAATTGTTGATGTTAGG+TGG + chr5_1:10103181-10103200 None:intergenic 30.0%
CTAAGATATATTCTTGCTTC+CGG - chr5_1:10103517-10103536 Msa0716620:intron 30.0%
AAACAATTCTGCTGAAAACT+TGG + chr5_1:10103543-10103562 None:intergenic 30.0%
!!! ATTTTGTTTTCAGTTGCCAT+TGG + chr5_1:10095279-10095298 None:intergenic 30.0%
TATTGGAAGACACATAGTTT+GGG - chr5_1:10103934-10103953 Msa0716620:intron 30.0%
TTTCTAACCAAAGCATATGT+TGG + chr5_1:10095369-10095388 None:intergenic 30.0%
ATTATCAATAAGCTCTTCCT+TGG + chr5_1:10104056-10104075 None:intergenic 30.0%
GTAGAATAACTCCTAAAGAT+TGG + chr5_1:10095470-10095489 None:intergenic 30.0%
! GAGTCAAAGACATATTGATT+AGG + chr5_1:10104164-10104183 None:intergenic 30.0%
TGATCATGAAACTCTTGTTA+AGG - chr5_1:10095585-10095604 Msa0716620:CDS 30.0%
GTACTCGTTATATTGAATAG+TGG - chr5_1:10104417-10104436 Msa0716620:intron 30.0%
TCTTCAAAAACTTGTCTAAC+TGG + chr5_1:10095900-10095919 None:intergenic 30.0%
!! AATTTTTGGGGAGTCTAATA+TGG + chr5_1:10104874-10104893 None:intergenic 30.0%
TGAGAAAACTTATGTTTCAG+AGG - chr5_1:10096330-10096349 Msa0716620:CDS 30.0%
ATTCCCTCATAACTATTTGT+TGG - chr5_1:10096616-10096635 Msa0716620:CDS 30.0%
ATGCCAACAAATAGTTATGA+GGG + chr5_1:10096622-10096641 None:intergenic 30.0%
AATGCCAACAAATAGTTATG+AGG + chr5_1:10096623-10096642 None:intergenic 30.0%
!!! CTCCTTTTATTTGTTGTGAA+TGG + chr5_1:10096649-10096668 None:intergenic 30.0%
TTCAGAAGCTTCAATATCTT+TGG + chr5_1:10096696-10096715 None:intergenic 30.0%
ATTCAAATATTCATCAGCAG+TGG + chr5_1:10096741-10096760 None:intergenic 30.0%
GAAAACAAAATCCTCATCCT+AGG - chr5_1:10095288-10095307 Msa0716620:intron 35.0%
CATTGGAAGACACATAGTTT+GGG - chr5_1:10095323-10095342 Msa0716620:intron 35.0%
AGGAAATCCAACATATGCTT+TGG - chr5_1:10095359-10095378 Msa0716620:intron 35.0%
TTAGCAGCTGTAATAAGCTT+TGG + chr5_1:10095414-10095433 None:intergenic 35.0%
ATTGTCAATAAGCTCTTCCT+TGG + chr5_1:10095445-10095464 None:intergenic 35.0%
AAATATGTCCTTGAATCTGC+AGG - chr5_1:10095552-10095571 Msa0716620:intron 35.0%
AATATGTCCTTGAATCTGCA+GGG - chr5_1:10095553-10095572 Msa0716620:intron 35.0%
TAAAGAAGCTGGAAACGTTA+AGG - chr5_1:10095687-10095706 Msa0716620:CDS 35.0%
AGCAAAGATCTAACTGTCAA+AGG + chr5_1:10095782-10095801 None:intergenic 35.0%
CTTCGGATTCAATTACTCTT+CGG + chr5_1:10095935-10095954 None:intergenic 35.0%
AAAGTTGTCATTCTTGGAGA+TGG - chr5_1:10096047-10096066 Msa0716620:CDS 35.0%
!! ACAGCTTTGTTCAATGTGTT+GGG + chr5_1:10096232-10096251 None:intergenic 35.0%
AATTCTTGGGGAGTCTAATA+TGG + chr5_1:10096255-10096274 None:intergenic 35.0%
!!! TTTTGTTGTTGCTCGTGAAT+CGG - chr5_1:10096996-10097015 Msa0716620:intron 35.0%
TGATTTCATGGCAAAGTTAG+GGG + chr5_1:10097348-10097367 None:intergenic 35.0%
! GTTGATTTCATGGCAAAGTT+AGG + chr5_1:10097350-10097369 None:intergenic 35.0%
TTGCCATGAAATCAACACTT+TGG - chr5_1:10097354-10097373 Msa0716620:intron 35.0%
GTTTATCATACTCTCAGAGA+AGG + chr5_1:10097383-10097402 None:intergenic 35.0%
! ACTGCATATACATGATAGTG+CGG - chr5_1:10097449-10097468 Msa0716620:intron 35.0%
CTCCATTAATCTCATAAAGG+GGG + chr5_1:10097480-10097499 None:intergenic 35.0%
CCTCTCCATTAATCTCATAA+AGG + chr5_1:10097483-10097502 None:intergenic 35.0%
CCTTTATGAGATTAATGGAG+AGG - chr5_1:10097480-10097499 Msa0716620:intron 35.0%
TTATGAGATTAATGGAGAGG+AGG - chr5_1:10097483-10097502 Msa0716620:intron 35.0%
TATGAGATTAATGGAGAGGA+GGG - chr5_1:10097484-10097503 Msa0716620:intron 35.0%
!! AGATGATTTGGCTTGTTACT+CGG + chr5_1:10097513-10097532 None:intergenic 35.0%
TGACATGGGAATAGATGATT+TGG + chr5_1:10097525-10097544 None:intergenic 35.0%
! CCATTCAGAAGACATTTTGT+TGG + chr5_1:10097588-10097607 None:intergenic 35.0%
CCAACAAAATGTCTTCTGAA+TGG - chr5_1:10097585-10097604 Msa0716620:intron 35.0%
! AATGTTGATGGGAGTTTCAA+TGG + chr5_1:10097692-10097711 None:intergenic 35.0%
GTACCATTCTGAATGTTGAT+GGG + chr5_1:10097703-10097722 None:intergenic 35.0%
AGTACCATTCTGAATGTTGA+TGG + chr5_1:10097704-10097723 None:intergenic 35.0%
! CATTCAGAATGGTACTTTTC+CGG - chr5_1:10097708-10097727 Msa0716620:intron 35.0%
GGTGCTTATTCTACAAAAAG+TGG + chr5_1:10097819-10097838 None:intergenic 35.0%
ATGTAGTCTTCAATATTGGG+AGG - chr5_1:10097906-10097925 Msa0716620:intron 35.0%
! AGAGACGTGTTTTCCAATAT+TGG + chr5_1:10097963-10097982 None:intergenic 35.0%
AAACAACAAAGGTCTGCATT+TGG + chr5_1:10098351-10098370 None:intergenic 35.0%
ACCTCTCCAGATAAAATTAC+GGG - chr5_1:10098373-10098392 Msa0716620:intron 35.0%
!!! TCATTTTTTTTAGTGGTGGC+CGG + chr5_1:10098634-10098653 None:intergenic 35.0%
! ACCGTCAGATAATTTTTGTG+TGG + chr5_1:10098676-10098695 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr5_1:10098815-10098834 Msa0716620:intron 35.0%
GGGTTAGGCTATATAATATG+CGG + chr5_1:10098950-10098969 None:intergenic 35.0%
TTCTTATAAATGTGACCGGA+GGG + chr5_1:10099391-10099410 None:intergenic 35.0%
TTTCTTATAAATGTGACCGG+AGG + chr5_1:10099392-10099411 None:intergenic 35.0%
!! AAGTTCAAGTTCATTTTGGG+CGG - chr5_1:10099549-10099568 Msa0716620:intron 35.0%
! TGCTCTTATGCAAAGTTTTG+GGG + chr5_1:10099675-10099694 None:intergenic 35.0%
! GTGCTCTTATGCAAAGTTTT+GGG + chr5_1:10099676-10099695 None:intergenic 35.0%
!! TTGCATAAGAGCACCATTAT+CGG - chr5_1:10099682-10099701 Msa0716620:intron 35.0%
CTTATCTGACAAAGTAGCAT+AGG + chr5_1:10099735-10099754 None:intergenic 35.0%
!!! GCCCGTTTTTAAGATTTTGA+TGG + chr5_1:10100213-10100232 None:intergenic 35.0%
! TCATCTTTTCAACGGCATAA+TGG + chr5_1:10100291-10100310 None:intergenic 35.0%
GTTGAAAAGATGATACCGTT+AGG - chr5_1:10100298-10100317 Msa0716620:intron 35.0%
! CTTCTAAAGAGGGTTTAAGA+AGG - chr5_1:10100350-10100369 Msa0716620:intron 35.0%
! TACGTATTTGGTTCCTTTCA+CGG - chr5_1:10100533-10100552 Msa0716620:intron 35.0%
GTTTGATGTAATTCCGTGAA+AGG + chr5_1:10100549-10100568 None:intergenic 35.0%
CAGGGTCGTTTCTATAAAAT+AGG - chr5_1:10100713-10100732 Msa0716620:intron 35.0%
ATAGATGTTGTACCTGATGT+CGG + chr5_1:10101324-10101343 None:intergenic 35.0%
! GAGTAGAAATTAGGTTGTTC+AGG - chr5_1:10101527-10101546 Msa0716620:intron 35.0%
!!! GTTGCTCTTTTCTAAGATGT+AGG - chr5_1:10101618-10101637 Msa0716620:intron 35.0%
CAACAAGATAAAGTGAGTAG+AGG + chr5_1:10101676-10101695 None:intergenic 35.0%
TGTTGTTCTTGCTTTGATTG+TGG - chr5_1:10101691-10101710 Msa0716620:intron 35.0%
! TAAGCATTGTTGCGTGAATT+TGG - chr5_1:10101753-10101772 Msa0716620:intron 35.0%
CTTCACATACATGTTCTTGT+TGG - chr5_1:10101799-10101818 Msa0716620:intron 35.0%
TTGCTGAATGACAATCATTG+AGG + chr5_1:10102085-10102104 None:intergenic 35.0%
TGTCATTCAGCAACAAGATT+TGG - chr5_1:10102092-10102111 Msa0716620:intron 35.0%
GTCATTCAGCAACAAGATTT+GGG - chr5_1:10102093-10102112 Msa0716620:intron 35.0%
TCTTGATCACTGAAATCCAT+GGG + chr5_1:10102333-10102352 None:intergenic 35.0%
! GTCTAAGTTGAGAAACAAGA+TGG - chr5_1:10102575-10102594 Msa0716620:intron 35.0%
! TTGATGATTTCAAGTCACTC+GGG - chr5_1:10102676-10102695 Msa0716620:intron 35.0%
GAGCCAGACAAAAAATTATG+GGG + chr5_1:10102827-10102846 None:intergenic 35.0%
GGAGCCAGACAAAAAATTAT+GGG + chr5_1:10102828-10102847 None:intergenic 35.0%
GCTATGTTCATCTACATTGA+CGG + chr5_1:10102849-10102868 None:intergenic 35.0%
TGGAGACAAAATCAAAGACA+AGG - chr5_1:10102940-10102959 Msa0716620:intron 35.0%
GGAGACAAAATCAAAGACAA+GGG - chr5_1:10102941-10102960 Msa0716620:intron 35.0%
TTTCTTAACTAGTGCTCTGA+GGG + chr5_1:10103014-10103033 None:intergenic 35.0%
! TTTTCTTAACTAGTGCTCTG+AGG + chr5_1:10103015-10103034 None:intergenic 35.0%
CGTTTGCAATGAGTTTCAAT+AGG + chr5_1:10103215-10103234 None:intergenic 35.0%
!! AGTAGTAGATGGATTGAAGT+TGG - chr5_1:10103722-10103741 Msa0716620:intron 35.0%
GAAAACAAAATCCTCATCCT+AGG - chr5_1:10095288-10095307 Msa0716620:intron 35.0%
CTATTGGAAGACACATAGTT+TGG - chr5_1:10103933-10103952 Msa0716620:intron 35.0%
AGGAAATCCAACATATGCTT+TGG - chr5_1:10095359-10095378 Msa0716620:intron 35.0%
TTAGCAGCTGTAATAAGCTT+TGG + chr5_1:10095414-10095433 None:intergenic 35.0%
AATATGTCTTTGACTCTGCA+GGG - chr5_1:10104168-10104187 Msa0716620:intron 35.0%
TAGACTACTAATTGAGGATC+AGG - chr5_1:10104260-10104279 Msa0716620:CDS 35.0%
TAAAGAAGCTGGAAACGTTA+AGG - chr5_1:10095687-10095706 Msa0716620:CDS 35.0%
CAAGTTACGTAAGAAGTAAC+CGG + chr5_1:10095994-10096013 None:intergenic 35.0%
AAAGTTGTCATTCTTGGAGA+TGG - chr5_1:10096047-10096066 Msa0716620:CDS 35.0%
!! ACAGCTTTGTTCAATGTGTT+GGG + chr5_1:10096232-10096251 None:intergenic 35.0%
CAAGTTCTCAAGGATATTCA+AGG - chr5_1:10104974-10104993 Msa0716620:intron 35.0%
CCAAACTATGTGTCTTCCAA+TGG + chr5_1:10095325-10095344 None:intergenic 40.0%
CCATTGGAAGACACATAGTT+TGG - chr5_1:10095322-10095341 Msa0716620:intron 40.0%
GTTTGGGCAAGTATTAAAGC+AGG - chr5_1:10095339-10095358 Msa0716620:intron 40.0%
GCTTTGGTTAGAAAAACACC+TGG - chr5_1:10095375-10095394 Msa0716620:intron 40.0%
!! TTTGGCTTGTTAACATTGCC+AGG + chr5_1:10095396-10095415 None:intergenic 40.0%
ATAAGCTCTTCCTTGGTTTC+AGG + chr5_1:10095438-10095457 None:intergenic 40.0%
TATATCACCCTGCAGATTCA+AGG + chr5_1:10095563-10095582 None:intergenic 40.0%
CGAAGAGTAATTGAATCCGA+AGG - chr5_1:10095933-10095952 Msa0716620:CDS 40.0%
GTAAGTGTAAGGAACTCCTT+CGG + chr5_1:10095952-10095971 None:intergenic 40.0%
TGGCAACAAAGGTAAGTGTA+AGG + chr5_1:10095963-10095982 None:intergenic 40.0%
ACGTAAGAAGTAACCCGTAA+AGG + chr5_1:10095988-10096007 None:intergenic 40.0%
GGGTTACTTCTTACGTAACT+TGG - chr5_1:10095992-10096011 Msa0716620:CDS 40.0%
CTTGGAGATGGAAATGTGAA+AGG - chr5_1:10096059-10096078 Msa0716620:CDS 40.0%
TTCAGGAGCTTATGTAACTG+AGG - chr5_1:10096168-10096187 Msa0716620:intron 40.0%
TTATGTAACTGAGGCTGATG+TGG - chr5_1:10096177-10096196 Msa0716620:intron 40.0%
TATGTAACTGAGGCTGATGT+GGG - chr5_1:10096178-10096197 Msa0716620:intron 40.0%
!! GACAGCTTTGTTCAATGTGT+TGG + chr5_1:10096233-10096252 None:intergenic 40.0%
! GCTCTTTGGGAGAAAAAGAT+TGG - chr5_1:10096298-10096317 Msa0716620:CDS 40.0%
ATAGCCGCACAAATATCTGA+CGG - chr5_1:10096484-10096503 Msa0716620:CDS 40.0%
TACACCGTCAGATATTTGTG+CGG + chr5_1:10096491-10096510 None:intergenic 40.0%
GAAGCTTCAATATCTTTGGC+TGG + chr5_1:10096692-10096711 None:intergenic 40.0%
! ATTTAAAACCCACGTCAGGA+TGG - chr5_1:10097033-10097052 Msa0716620:intron 40.0%
CACCCAAACATTGCTTCATA+TGG + chr5_1:10097069-10097088 None:intergenic 40.0%
CATATGAAGCAATGTTTGGG+TGG - chr5_1:10097067-10097086 Msa0716620:intron 40.0%
AAAAGGAAAACTAGGCCCTA+GGG - chr5_1:10097234-10097253 Msa0716620:intron 40.0%
GTCCCCCTTTATGAGATTAA+TGG - chr5_1:10097475-10097494 Msa0716620:intron 40.0%
! GGCATTTTTCGCAATAATGG+GGG + chr5_1:10097644-10097663 None:intergenic 40.0%
! CGGCATTTTTCGCAATAATG+GGG + chr5_1:10097645-10097664 None:intergenic 40.0%
! GCGGCATTTTTCGCAATAAT+GGG + chr5_1:10097646-10097665 None:intergenic 40.0%
ACTCCCATCAACATTCAGAA+TGG - chr5_1:10097697-10097716 Msa0716620:intron 40.0%
GATTTGGAAGTTGAAAGCTC+CGG + chr5_1:10097730-10097749 None:intergenic 40.0%
ATGACGGTAATCAGATTGCT+TGG + chr5_1:10097758-10097777 None:intergenic 40.0%
AGCAATCTGATTACCGTCAT+CGG - chr5_1:10097758-10097777 Msa0716620:intron 40.0%
TCAGAATCTCAAACCGATGA+CGG + chr5_1:10097774-10097793 None:intergenic 40.0%
!! ATCGGTTTGAGATTCTGAGA+GGG - chr5_1:10097776-10097795 Msa0716620:intron 40.0%
CTACAAAAAGTGGGTACACT+TGG + chr5_1:10097809-10097828 None:intergenic 40.0%
CCATTGAAGACGCTTTCTTA+TGG + chr5_1:10097857-10097876 None:intergenic 40.0%
!! CCATAAGAAAGCGTCTTCAA+TGG - chr5_1:10097854-10097873 Msa0716620:intron 40.0%
!! TAAGAAAGCGTCTTCAATGG+AGG - chr5_1:10097857-10097876 Msa0716620:intron 40.0%
AGTCTTCAATATTGGGAGGA+AGG - chr5_1:10097910-10097929 Msa0716620:intron 40.0%
AAAACACGTCTCTGACTGAA+TGG - chr5_1:10097970-10097989 Msa0716620:intron 40.0%
!! GGATAATGGATGACCAAGAT+GGG - chr5_1:10098126-10098145 Msa0716620:intron 40.0%
!! GATAATGGATGACCAAGATG+GGG - chr5_1:10098127-10098146 Msa0716620:intron 40.0%
CTCTCAAACAAATACTCAGG+TGG + chr5_1:10098191-10098210 None:intergenic 40.0%
CACCTGAGTATTTGTTTGAG+AGG - chr5_1:10098189-10098208 Msa0716620:intron 40.0%
CTCCTCTCAAACAAATACTC+AGG + chr5_1:10098194-10098213 None:intergenic 40.0%
CTGAGTATTTGTTTGAGAGG+AGG - chr5_1:10098192-10098211 Msa0716620:intron 40.0%
CTTAGGTATTAGACCAGCTA+GGG + chr5_1:10098288-10098307 None:intergenic 40.0%
! TGGAGAGGTACAAACAACAA+AGG + chr5_1:10098362-10098381 None:intergenic 40.0%
! ACCCGTAATTTTATCTGGAG+AGG + chr5_1:10098377-10098396 None:intergenic 40.0%
!!! ATTTTTTTTAGTGGTGGCCG+GGG + chr5_1:10098632-10098651 None:intergenic 40.0%
!!! CATTTTTTTTAGTGGTGGCC+GGG + chr5_1:10098633-10098652 None:intergenic 40.0%
CGGGTATCTATTACTTGTAG+AGG - chr5_1:10098745-10098764 Msa0716620:intron 40.0%
!!! TCAGTCCATTGTTTTTGTGG+TGG + chr5_1:10098855-10098874 None:intergenic 40.0%
ATTTATGTACTCGGACCTCA+TGG + chr5_1:10098894-10098913 None:intergenic 40.0%
ATGAGGTCCGAGTACATAAA+TGG - chr5_1:10098893-10098912 Msa0716620:intron 40.0%
TGAGGTCCGAGTACATAAAT+GGG - chr5_1:10098894-10098913 Msa0716620:intron 40.0%
GTCTGACCCATTTATGTACT+CGG + chr5_1:10098903-10098922 None:intergenic 40.0%
TGACCCAACCCATTTGTAAT+TGG - chr5_1:10098923-10098942 Msa0716620:intron 40.0%
GACCCAACCCATTTGTAATT+GGG - chr5_1:10098924-10098943 Msa0716620:intron 40.0%
TATGCGGCCCAATTACAAAT+GGG + chr5_1:10098934-10098953 None:intergenic 40.0%
ATATGCGGCCCAATTACAAA+TGG + chr5_1:10098935-10098954 None:intergenic 40.0%
TAGCCTAACCCGATTTATGT+TGG - chr5_1:10098959-10098978 Msa0716620:intron 40.0%
TGACCAACATAAATCGGGTT+AGG + chr5_1:10098965-10098984 None:intergenic 40.0%
AACCCGATTTATGTTGGTCA+TGG - chr5_1:10098965-10098984 Msa0716620:intron 40.0%
GTCCATGACCAACATAAATC+GGG + chr5_1:10098970-10098989 None:intergenic 40.0%
GGTCCATGACCAACATAAAT+CGG + chr5_1:10098971-10098990 None:intergenic 40.0%
! ACCGGAGGGAGTATAAAATT+GGG + chr5_1:10099377-10099396 None:intergenic 40.0%
AATCCTAACTCATACTCTCC+CGG + chr5_1:10099525-10099544 None:intergenic 40.0%
AGTTGACAAATCATTGGGTC+CGG + chr5_1:10099586-10099605 None:intergenic 40.0%
!! GCTCTTATGCAAAGTTTTGG+GGG + chr5_1:10099674-10099693 None:intergenic 40.0%
! GGTGCTCTTATGCAAAGTTT+TGG + chr5_1:10099677-10099696 None:intergenic 40.0%
CTCACAATGTCAACCGATAA+TGG + chr5_1:10099698-10099717 None:intergenic 40.0%
! GCTACTTTGTCAGATAAGTG+AGG - chr5_1:10099737-10099756 Msa0716620:intron 40.0%
TAATTTGGATTGAAGGTCGC+CGG + chr5_1:10100253-10100272 None:intergenic 40.0%
! TTAAGAAGGGCATGGATTCT+AGG - chr5_1:10100364-10100383 Msa0716620:intron 40.0%
! AGGAGCACAATCTTTGCATT+TGG - chr5_1:10100384-10100403 Msa0716620:intron 40.0%
GGAGCACAATCTTTGCATTT+GGG - chr5_1:10100385-10100404 Msa0716620:intron 40.0%
GTATCTTGTGTTTGCTTCAG+TGG - chr5_1:10100407-10100426 Msa0716620:intron 40.0%
TGGACACTAGACTTCATCTA+AGG - chr5_1:10100427-10100446 Msa0716620:intron 40.0%
TTGTTATCGTGCAATACGCA+AGG - chr5_1:10100657-10100676 Msa0716620:intron 40.0%
GAGAGGTGAAATTTGTCGTT+TGG - chr5_1:10100869-10100888 Msa0716620:intron 40.0%
CACCAGACTTATGTTCAGAA+AGG - chr5_1:10101024-10101043 Msa0716620:intron 40.0%
CTCCTTTCTGAACATAAGTC+TGG + chr5_1:10101029-10101048 None:intergenic 40.0%
AGAAAGGAGAACTAGAGTCT+AGG - chr5_1:10101040-10101059 Msa0716620:intron 40.0%
! TTTAGGCCCATAACTTTTGG+AGG - chr5_1:10101154-10101173 Msa0716620:intron 40.0%
TCTTGGAGTCTCTTGATCAT+AGG - chr5_1:10101489-10101508 Msa0716620:intron 40.0%
AAATTGCAACGGGCCAAATA+TGG + chr5_1:10101870-10101889 None:intergenic 40.0%
CAATGGACATAGTAGGCATA+AGG + chr5_1:10102052-10102071 None:intergenic 40.0%
GGAATCTCAATGGACATAGT+AGG + chr5_1:10102059-10102078 None:intergenic 40.0%
ATTGAGGTCAGGAATCTCAA+TGG + chr5_1:10102069-10102088 None:intergenic 40.0%
GAATGACAATCATTGAGGTC+AGG + chr5_1:10102080-10102099 None:intergenic 40.0%
TTGTGACCTGATTCTCTTCA+AGG + chr5_1:10102127-10102146 None:intergenic 40.0%
TAAGTTGTGCTTTGTCTGCT+TGG - chr5_1:10102250-10102269 Msa0716620:intron 40.0%
AAGTTGTGCTTTGTCTGCTT+GGG - chr5_1:10102251-10102270 Msa0716620:intron 40.0%
CTCTTGATCACTGAAATCCA+TGG + chr5_1:10102334-10102353 None:intergenic 40.0%
AAACCGGAAGAGTCATAACA+AGG + chr5_1:10102510-10102529 None:intergenic 40.0%
TCAGTTGTGGAAGTAGAAAC+CGG + chr5_1:10102526-10102545 None:intergenic 40.0%
CCAGACAAAAAATTATGGGG+TGG + chr5_1:10102824-10102843 None:intergenic 40.0%
!!! CCACCCCATAATTTTTTGTC+TGG - chr5_1:10102821-10102840 Msa0716620:intron 40.0%
CGGAGCCAGACAAAAAATTA+TGG + chr5_1:10102829-10102848 None:intergenic 40.0%
TGAAGACGAATTCAACATGC+AGG - chr5_1:10103355-10103374 Msa0716620:intron 40.0%
ACGAATTCAACATGCAGGTT+GGG - chr5_1:10103360-10103379 Msa0716620:intron 40.0%
AATTCTGCTGAAAACTTGGC+CGG + chr5_1:10103539-10103558 None:intergenic 40.0%
AACACACAGAGAGTAGTAGA+TGG - chr5_1:10103711-10103730 Msa0716620:intron 40.0%
!! AGTAGATGGATTGAAGTTGG+TGG - chr5_1:10103725-10103744 Msa0716620:intron 40.0%
TCACACACTCACTACTACTT+TGG - chr5_1:10103794-10103813 Msa0716620:CDS 40.0%
GTTTGGGCAAGTATTAAAGC+AGG - chr5_1:10095339-10095358 Msa0716620:intron 40.0%
GCTTTGGTTAGAAAAACACC+TGG - chr5_1:10095375-10095394 Msa0716620:intron 40.0%
!! TTTGGCTTGTTAACATTGCC+AGG + chr5_1:10095396-10095415 None:intergenic 40.0%
ATAAGCTCTTCCTTGGTTTC+AGG + chr5_1:10095438-10095457 None:intergenic 40.0%
CAATATGTCTTTGACTCTGC+AGG - chr5_1:10104167-10104186 Msa0716620:intron 40.0%
TGCTGGTAGACTACTAATTG+AGG - chr5_1:10095639-10095658 Msa0716620:CDS 40.0%
! AACTTGTCTAACTGGCTCAA+CGG + chr5_1:10095892-10095911 None:intergenic 40.0%
CTTCGGCTTCAATTACTCTT+CGG + chr5_1:10104555-10104574 None:intergenic 40.0%
GTAAGTGTAAGGAACTCCTT+CGG + chr5_1:10095952-10095971 None:intergenic 40.0%
TGGCAACAAAGGTAAGTGTA+AGG + chr5_1:10095963-10095982 None:intergenic 40.0%
ACGTAAGAAGTAACCGGTAA+AGG + chr5_1:10104608-10104627 None:intergenic 40.0%
CGGTTACTTCTTACGTAACT+TGG - chr5_1:10104612-10104631 Msa0716620:CDS 40.0%
CTTGGAGATGGAAATGTGAA+AGG - chr5_1:10096059-10096078 Msa0716620:CDS 40.0%
TTCAGGAGCTTATGTAACTG+AGG - chr5_1:10096168-10096187 Msa0716620:intron 40.0%
TTATGTAACTGAGGCTGATG+TGG - chr5_1:10096177-10096196 Msa0716620:intron 40.0%
TATGTAACTGAGGCTGATGT+GGG - chr5_1:10096178-10096197 Msa0716620:intron 40.0%
!! GACAGCTTTGTTCAATGTGT+TGG + chr5_1:10096233-10096252 None:intergenic 40.0%
! AAGGGCAATGACCTCATTTT+GGG + chr5_1:10104903-10104922 None:intergenic 40.0%
! AAAGGGCAATGACCTCATTT+TGG + chr5_1:10104904-10104923 None:intergenic 40.0%
AAAATGAGGTCATTGCCCTT+TGG - chr5_1:10104903-10104922 Msa0716620:CDS 40.0%
AAATGAGGTCATTGCCCTTT+GGG - chr5_1:10104904-10104923 Msa0716620:CDS 40.0%
! CCCAATCTTTTTCTCCCAAA+GGG + chr5_1:10104921-10104940 None:intergenic 40.0%
! CCCTTTGGGAGAAAAAGATT+GGG - chr5_1:10104918-10104937 Msa0716620:CDS 40.0%
! TCCCAATCTTTTTCTCCCAA+AGG + chr5_1:10104922-10104941 None:intergenic 40.0%
TTCAGAGGAACAAGTTCTCA+AGG - chr5_1:10096345-10096364 Msa0716620:CDS 40.0%
ATGACCGCACAAATATCTGA+CGG - chr5_1:10105103-10105122 Msa0716620:CDS 40.0%
TACACCGTCAGATATTTGTG+CGG + chr5_1:10096491-10096510 None:intergenic 40.0%
GAAGCTTCAATATCTTTGGC+TGG + chr5_1:10096692-10096711 None:intergenic 40.0%
AGCTGCTAATCCTGAAACCA+AGG - chr5_1:10095425-10095444 Msa0716620:intron 45.0%
GATATTGTGATCTGTGCTGC+TGG - chr5_1:10095622-10095641 Msa0716620:CDS 45.0%
CGTCTAGCCCAAATTCAGAT+GGG + chr5_1:10095854-10095873 None:intergenic 45.0%
ACGTCTAGCCCAAATTCAGA+TGG + chr5_1:10095855-10095874 None:intergenic 45.0%
! ATCTGAATTTGGGCTAGACG+TGG - chr5_1:10095854-10095873 Msa0716620:intron 45.0%
AGAATGACAACTTTGTCCCG+AGG + chr5_1:10096041-10096060 None:intergenic 45.0%
CGGGACAAAGTTGTCATTCT+TGG - chr5_1:10096041-10096060 Msa0716620:CDS 45.0%
! GGGATCATTTGCTGCTCTAA+TGG + chr5_1:10096212-10096231 None:intergenic 45.0%
GGTGTATGTCACATCAGGAT+AGG + chr5_1:10096720-10096739 None:intergenic 45.0%
CAAAAGGAAAACTAGGCCCT+AGG - chr5_1:10097233-10097252 Msa0716620:intron 45.0%
GTGGATGACGAAATCAGCAT+TGG - chr5_1:10097316-10097335 Msa0716620:intron 45.0%
! GACGAAATCAGCATTGGATG+CGG - chr5_1:10097322-10097341 Msa0716620:intron 45.0%
! TAATGGGGGTCTTTTCCTCT+CGG + chr5_1:10097630-10097649 None:intergenic 45.0%
! GGCGGCATTTTTCGCAATAA+TGG + chr5_1:10097647-10097666 None:intergenic 45.0%
AGATTGCTTGGTCGTGGATT+TGG + chr5_1:10097746-10097765 None:intergenic 45.0%
GTAATCAGATTGCTTGGTCG+TGG + chr5_1:10097752-10097771 None:intergenic 45.0%
!! CATCGGTTTGAGATTCTGAG+AGG - chr5_1:10097775-10097794 Msa0716620:intron 45.0%
!! TGGGAACAAGAGTACCAAGA+AGG - chr5_1:10098015-10098034 Msa0716620:intron 45.0%
ACTCCAGTTGCTGAACCAAA+AGG - chr5_1:10098046-10098065 Msa0716620:intron 45.0%
AAATGGGTACACTTGGAGAG+CGG + chr5_1:10098087-10098106 None:intergenic 45.0%
!! CGGATAATGGATGACCAAGA+TGG - chr5_1:10098125-10098144 Msa0716620:intron 45.0%
GCTTAGGTATTAGACCAGCT+AGG + chr5_1:10098289-10098308 None:intergenic 45.0%
GTCTAATACCTAAGCCTCCA+AGG - chr5_1:10098294-10098313 Msa0716620:intron 45.0%
GGAAAAAGATTGCTAGACCG+AGG + chr5_1:10098322-10098341 None:intergenic 45.0%
AAGGTCTGCATTTGGTTAGC+TGG + chr5_1:10098343-10098362 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr5_1:10098570-10098589 Msa0716620:intron 45.0%
!!! TCCATTGTTTTTGTGGTGGC+CGG + chr5_1:10098851-10098870 None:intergenic 45.0%
!!! GGGTCAGTCCATTGTTTTTG+TGG + chr5_1:10098858-10098877 None:intergenic 45.0%
! GGCCCAATTACAAATGGGTT+GGG + chr5_1:10098929-10098948 None:intergenic 45.0%
AAAACTAAAACGGGTCGGGT+TGG + chr5_1:10098992-10099011 None:intergenic 45.0%
TAACCTATTGGGTTTCGGAC+CGG + chr5_1:10099342-10099361 None:intergenic 45.0%
CGGGTTAACCTATTGGGTTT+CGG + chr5_1:10099347-10099366 None:intergenic 45.0%
CGAAACCCAATAGGTTAACC+CGG - chr5_1:10099345-10099364 Msa0716620:intron 45.0%
! CCGGAGGGAGTATAAAATTG+GGG + chr5_1:10099376-10099395 None:intergenic 45.0%
! CCCCAATTTTATACTCCCTC+CGG - chr5_1:10099373-10099392 Msa0716620:intron 45.0%
! GACCGGAGGGAGTATAAAAT+TGG + chr5_1:10099378-10099397 None:intergenic 45.0%
! CATTTTGGGCGGCCTTTTTT+AGG - chr5_1:10099560-10099579 Msa0716620:intron 45.0%
AAGAGGGTTTAAGAAGGGCA+TGG - chr5_1:10100356-10100375 Msa0716620:intron 45.0%
TGCAATACGCAAGGCATATC+CGG - chr5_1:10100666-10100685 Msa0716620:intron 45.0%
ATTTGTCACTCCTCCGTTGT+GGG - chr5_1:10100892-10100911 Msa0716620:intron 45.0%
! CGTTTTCCTCTTTCCCACAA+CGG + chr5_1:10100908-10100927 None:intergenic 45.0%
GTGGGAAAGAGGAAAACGAA+TGG - chr5_1:10100910-10100929 Msa0716620:intron 45.0%
CAGGTTTAGTGAGCAAGCAA+TGG - chr5_1:10102215-10102234 Msa0716620:intron 45.0%
TGCTCATGTTTGGTTGCAAC+TGG - chr5_1:10102445-10102464 Msa0716620:intron 45.0%
GACGAATTCAACATGCAGGT+TGG - chr5_1:10103359-10103378 Msa0716620:intron 45.0%
!! AGGCGTCAATTTTGACCAAC+AGG - chr5_1:10103643-10103662 Msa0716620:intron 45.0%
!! GGCGTCAATTTTGACCAACA+GGG - chr5_1:10103644-10103663 Msa0716620:intron 45.0%
TGAAATAGAAGCAGCCCTGT+TGG + chr5_1:10103661-10103680 None:intergenic 45.0%
TGTCTTCCAATAGCTCCTGT+TGG + chr5_1:10103926-10103945 None:intergenic 45.0%
AGCTGCTAATCCTGAAACCA+AGG - chr5_1:10095425-10095444 Msa0716620:intron 45.0%
CGTCTAGCCCAAATTCAGAT+GGG + chr5_1:10095854-10095873 None:intergenic 45.0%
ACGTCTAGCCCAAATTCAGA+TGG + chr5_1:10095855-10095874 None:intergenic 45.0%
! ATCTGAATTTGGGCTAGACG+TGG - chr5_1:10095854-10095873 Msa0716620:intron 45.0%
CGAAGAGTAATTGAAGCCGA+AGG - chr5_1:10104553-10104572 Msa0716620:CDS 45.0%
AGAATGACAACTTTGTCCCG+AGG + chr5_1:10096041-10096060 None:intergenic 45.0%
CGGGACAAAGTTGTCATTCT+TGG - chr5_1:10096041-10096060 Msa0716620:CDS 45.0%
! GGGATCATTTGCTGCTCTAA+TGG + chr5_1:10096212-10096231 None:intergenic 45.0%
! GCCCTTTGGGAGAAAAAGAT+TGG - chr5_1:10104917-10104936 Msa0716620:CDS 45.0%
GGTGTATGTCACATCAGGAT+AGG + chr5_1:10096720-10096739 None:intergenic 45.0%
!!! AATTTTATTTTTGTATTTTA+GGG + chr5_1:10099950-10099969 None:intergenic 5.0%
!!! AAATTTTATTTTTGTATTTT+AGG + chr5_1:10099951-10099970 None:intergenic 5.0%
!! AAATAATTTAATAAAAACAT+CGG + chr5_1:10100078-10100097 None:intergenic 5.0%
!!! TTTTTTACATTTTTTAATAT+TGG + chr5_1:10103073-10103092 None:intergenic 5.0%
!! TAATAATAATTAGTATAAAT+CGG - chr5_1:10103473-10103492 Msa0716620:intron 5.0%
ATCCTCATCCTAGGACCAAC+AGG - chr5_1:10095297-10095316 Msa0716620:intron 50.0%
TGTCTTCCAATGGCTCCTGT+TGG + chr5_1:10095315-10095334 None:intergenic 50.0%
CCTTTGTTGCCACGCCTTTA+CGG - chr5_1:10095971-10095990 Msa0716620:CDS 50.0%
CTTTGTTGCCACGCCTTTAC+GGG - chr5_1:10095972-10095991 Msa0716620:CDS 50.0%
AGAAGTAACCCGTAAAGGCG+TGG + chr5_1:10095983-10096002 None:intergenic 50.0%
ATGACAACTTTGTCCCGAGG+AGG + chr5_1:10096038-10096057 None:intergenic 50.0%
GCAGTGGTGTATGTCACATC+AGG + chr5_1:10096725-10096744 None:intergenic 50.0%
! AAGACCTGCTCTTGCTGCTT+CGG + chr5_1:10097283-10097302 None:intergenic 50.0%
TTGCGCATGGCTGTTGACAT+GGG + chr5_1:10097539-10097558 None:intergenic 50.0%
AATCTATCACGGCTTGCGCA+TGG + chr5_1:10097552-10097571 None:intergenic 50.0%
TCATACCTGAGAAAGCCGAG+AGG - chr5_1:10097612-10097631 Msa0716620:intron 50.0%
! CTTTTCCTCTCGGCTTTCTC+AGG + chr5_1:10097620-10097639 None:intergenic 50.0%
AAATGCCGCCAAAACCAGTG+CGG - chr5_1:10097657-10097676 Msa0716620:intron 50.0%
! AGAGTACCAAGAAGGCCATG+TGG - chr5_1:10098023-10098042 Msa0716620:intron 50.0%
TTCAGCAACTGGAGTCCACA+TGG + chr5_1:10098041-10098060 None:intergenic 50.0%
!!! CGTCCTTTTGGTTCAGCAAC+TGG + chr5_1:10098052-10098071 None:intergenic 50.0%
! GATCGGGAACTTCGTCCTTT+TGG + chr5_1:10098064-10098083 None:intergenic 50.0%
AATGGGTACACTTGGAGAGC+GGG + chr5_1:10098086-10098105 None:intergenic 50.0%
TGACCAAGATGGGGAACTGT+TGG - chr5_1:10098136-10098155 Msa0716620:intron 50.0%
GACCAAGATGGGGAACTGTT+GGG - chr5_1:10098137-10098156 Msa0716620:intron 50.0%
ACCAAGATGGGGAACTGTTG+GGG - chr5_1:10098138-10098157 Msa0716620:intron 50.0%
CCAACTGAGCTAAGCTCACA+AGG + chr5_1:10098568-10098587 None:intergenic 50.0%
CCTTGTGAGCTTAGCTCAGT+TGG - chr5_1:10098565-10098584 Msa0716620:intron 50.0%
!!! CATTGTTTTTGTGGTGGCCG+GGG + chr5_1:10098849-10098868 None:intergenic 50.0%
!!! CCATTGTTTTTGTGGTGGCC+GGG + chr5_1:10098850-10098869 None:intergenic 50.0%
CGGCCCAATTACAAATGGGT+TGG + chr5_1:10098930-10098949 None:intergenic 50.0%
TATAAAATTGGGGCCGAGCC+GGG + chr5_1:10099366-10099385 None:intergenic 50.0%
GTATAAAATTGGGGCCGAGC+CGG + chr5_1:10099367-10099386 None:intergenic 50.0%
! TGACCGGGAGAGTATGAGTT+AGG - chr5_1:10099519-10099538 Msa0716620:intron 50.0%
CATTGGGTCCGGCCTAAAAA+AGG + chr5_1:10099575-10099594 None:intergenic 50.0%
ACGGTAGCATTGCAGAGGAA+CGG + chr5_1:10099787-10099806 None:intergenic 50.0%
ATACCACGGTAGCATTGCAG+AGG + chr5_1:10099792-10099811 None:intergenic 50.0%
GCATGTATGCCACTCAAGTC+CGG - chr5_1:10100231-10100250 Msa0716620:intron 50.0%
AATACGCAAGGCATATCCGG+TGG - chr5_1:10100669-10100688 Msa0716620:intron 50.0%
GATTTGTCACTCCTCCGTTG+TGG - chr5_1:10100891-10100910 Msa0716620:intron 50.0%
TTTCCTCTTTCCCACAACGG+AGG + chr5_1:10100905-10100924 None:intergenic 50.0%
TGTTCCACATGCCTTGTGCA+TGG - chr5_1:10101251-10101270 Msa0716620:intron 50.0%
TGCATGTTGCTCCATGCACA+AGG + chr5_1:10101265-10101284 None:intergenic 50.0%
TGTGCATGGAGCAACATGCA+AGG - chr5_1:10101265-10101284 Msa0716620:intron 50.0%
GCATCCTGGATCTGCTAACT+GGG - chr5_1:10101289-10101308 Msa0716620:intron 50.0%
CTCTCGCCTTGAAGAGAATC+AGG - chr5_1:10102118-10102137 Msa0716620:intron 50.0%
! GCGCCTTGTTATGACTCTTC+CGG - chr5_1:10102504-10102523 Msa0716620:intron 50.0%
ATCCTCATCCTAGGACCAAC+AGG - chr5_1:10095297-10095316 Msa0716620:intron 50.0%
CAATAGCTCCTGTTGGTCCT+AGG + chr5_1:10103919-10103938 None:intergenic 50.0%
CTAGGACCAACAGGAGCTAT+TGG - chr5_1:10103917-10103936 Msa0716620:intron 50.0%
GACATTGTGATCTGTGCTGC+TGG - chr5_1:10104237-10104256 Msa0716620:CDS 50.0%
CTTTGTTGCCACGCCTTTAC+CGG - chr5_1:10095972-10095991 Msa0716620:CDS 50.0%
AGAAGTAACCGGTAAAGGCG+TGG + chr5_1:10104603-10104622 None:intergenic 50.0%
ATGACAACTTTGTCCCGAGG+AGG + chr5_1:10096038-10096057 None:intergenic 50.0%
GCAGTGGTGTATGTCACATC+AGG + chr5_1:10096725-10096744 None:intergenic 50.0%
CTCCTGTTGGTCCTAGGATG+AGG + chr5_1:10095302-10095321 None:intergenic 55.0%
CAATGGCTCCTGTTGGTCCT+AGG + chr5_1:10095308-10095327 None:intergenic 55.0%
CTAGGACCAACAGGAGCCAT+TGG - chr5_1:10095306-10095325 Msa0716620:intron 55.0%
CTGGCTCAACTGCCTCATGA+CGG + chr5_1:10095881-10095900 None:intergenic 55.0%
! CCGTAAAGGCGTGGCAACAA+AGG + chr5_1:10095974-10095993 None:intergenic 55.0%
TCGACGCAACTGATCCTCCT+CGG - chr5_1:10096021-10096040 Msa0716620:CDS 55.0%
AGATCGGTCCATCCTGACGT+GGG + chr5_1:10097044-10097063 None:intergenic 55.0%
AAGATCGGTCCATCCTGACG+TGG + chr5_1:10097045-10097064 None:intergenic 55.0%
CTCGGGAGTCTTCTTCCCTA+GGG + chr5_1:10097252-10097271 None:intergenic 55.0%
AGCAGCAAGAGCAGGTCTTC+CGG - chr5_1:10097284-10097303 Msa0716620:intron 55.0%
CTTGCGCATGGCTGTTGACA+TGG + chr5_1:10097540-10097559 None:intergenic 55.0%
AATGCCGCCAAAACCAGTGC+GGG - chr5_1:10097658-10097677 Msa0716620:intron 55.0%
!!! ACTCCAACCCGCACTGGTTT+TGG + chr5_1:10097668-10097687 None:intergenic 55.0%
AATGGTACTCCAACCCGCAC+TGG + chr5_1:10097674-10097693 None:intergenic 55.0%
TGGAGTCCACATGGCCTTCT+TGG + chr5_1:10098032-10098051 None:intergenic 55.0%
TACACTTGGAGAGCGGGATC+GGG + chr5_1:10098080-10098099 None:intergenic 55.0%
GTACACTTGGAGAGCGGGAT+CGG + chr5_1:10098081-10098100 None:intergenic 55.0%
ACCCCAACAGTTCCCCATCT+TGG + chr5_1:10098142-10098161 None:intergenic 55.0%
!! CAAGTGTTGGCTTCCCTAGC+TGG - chr5_1:10098272-10098291 Msa0716620:intron 55.0%
! ATTGCTAGACCGAGGCACCT+TGG + chr5_1:10098314-10098333 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr5_1:10098786-10098805 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr5_1:10098783-10098802 Msa0716620:intron 55.0%
AAGGTCCGGAGTTCAAACCC+CGG - chr5_1:10098829-10098848 Msa0716620:intron 55.0%
CCCGGCCACCACAAAAACAA+TGG - chr5_1:10098847-10098866 Msa0716620:intron 55.0%
CTCATGGACCAGGCTAAGTC+GGG + chr5_1:10098878-10098897 None:intergenic 55.0%
CCTCATGGACCAGGCTAAGT+CGG + chr5_1:10098879-10098898 None:intergenic 55.0%
AGACCGGTCCGAAACCCAAT+AGG - chr5_1:10099336-10099355 Msa0716620:intron 55.0%
CCGAGCCGGGTTAACCTATT+GGG + chr5_1:10099353-10099372 None:intergenic 55.0%
CCCAATAGGTTAACCCGGCT+CGG - chr5_1:10099350-10099369 Msa0716620:intron 55.0%
!!! TTGGGCGGCCTTTTTTAGGC+CGG - chr5_1:10099564-10099583 Msa0716620:intron 55.0%
GTTCCTCTGCAATGCTACCG+TGG - chr5_1:10099786-10099805 Msa0716620:intron 55.0%
ACTCCTCCGTTGTGGGAAAG+AGG - chr5_1:10100899-10100918 Msa0716620:intron 55.0%
!! GCCCATAACTTTTGGAGGCC+CGG - chr5_1:10101159-10101178 Msa0716620:intron 55.0%
GCCGGGCCTCCAAAAGTTAT+GGG + chr5_1:10101163-10101182 None:intergenic 55.0%
AGCCGGGCCTCCAAAAGTTA+TGG + chr5_1:10101164-10101183 None:intergenic 55.0%
!! TAACTTTTGGAGGCCCGGCT+TGG - chr5_1:10101164-10101183 Msa0716620:intron 55.0%
! TGCAAGGTGCTCAACCAAGC+CGG + chr5_1:10101181-10101200 None:intergenic 55.0%
ACCTTGCACTCCTCCAAGGT+TGG - chr5_1:10101193-10101212 Msa0716620:intron 55.0%
CCTTGCACTCCTCCAAGGTT+GGG - chr5_1:10101194-10101213 Msa0716620:intron 55.0%
AGAAGCAGACCCAACCTTGG+AGG + chr5_1:10101206-10101225 None:intergenic 55.0%
TCCAAGGTTGGGTCTGCTTC+TGG - chr5_1:10101205-10101224 Msa0716620:intron 55.0%
CCAAGGTTGGGTCTGCTTCT+GGG - chr5_1:10101206-10101225 Msa0716620:intron 55.0%
TGCTCCATGCACAAGGCATG+TGG + chr5_1:10101258-10101277 None:intergenic 55.0%
CGCATCCTGGATCTGCTAAC+TGG - chr5_1:10101288-10101307 Msa0716620:intron 55.0%
TGCACCCAGTTAGCAGATCC+AGG + chr5_1:10101296-10101315 None:intergenic 55.0%
GGATCTGCTAACTGGGTGCA+AGG - chr5_1:10101296-10101315 Msa0716620:intron 55.0%
!! AACTAGTGCTCTGAGGGCAC+TGG + chr5_1:10103008-10103027 None:intergenic 55.0%
CTCCTGTTGGTCCTAGGATG+AGG + chr5_1:10095302-10095321 None:intergenic 55.0%
! CGGTAAAGGCGTGGCAACAA+AGG + chr5_1:10104594-10104613 None:intergenic 55.0%
TCGACGCAACTGATCCTCCT+CGG - chr5_1:10096021-10096040 Msa0716620:CDS 55.0%
GCTAGACGTGGACCGTCATG+AGG - chr5_1:10095866-10095885 Msa0716620:CDS 60.0%
CGACGCAACTGATCCTCCTC+GGG - chr5_1:10096022-10096041 Msa0716620:CDS 60.0%
CCTCGGGAGTCTTCTTCCCT+AGG + chr5_1:10097253-10097272 None:intergenic 60.0%
CCTAGGGAAGAAGACTCCCG+AGG - chr5_1:10097250-10097269 Msa0716620:intron 60.0%
CACTCCGAAGCAGCAAGAGC+AGG - chr5_1:10097276-10097295 Msa0716620:intron 60.0%
AGCAAGAGCAGGTCTTCCGG+AGG - chr5_1:10097287-10097306 Msa0716620:intron 60.0%
CGTCATCCACACTGCTCCTC+CGG + chr5_1:10097306-10097325 None:intergenic 60.0%
!!! CCAACCCGCACTGGTTTTGG+CGG + chr5_1:10097665-10097684 None:intergenic 60.0%
! CCTAAGCCTCCAAGGTGCCT+CGG - chr5_1:10098302-10098321 Msa0716620:intron 60.0%
AAGGTTCGGGGTTCGAACCC+CGG - chr5_1:10098612-10098631 Msa0716620:intron 60.0%
TGGACTGACCCGACTTAGCC+TGG - chr5_1:10098867-10098886 Msa0716620:intron 60.0%
CCGACTTAGCCTGGTCCATG+AGG - chr5_1:10098876-10098895 Msa0716620:intron 60.0%
GTACTCGGACCTCATGGACC+AGG + chr5_1:10098888-10098907 None:intergenic 60.0%
GCCGAGCCGGGTTAACCTAT+TGG + chr5_1:10099354-10099373 None:intergenic 60.0%
TGAAGGTCGCCGGACTTGAG+TGG + chr5_1:10100243-10100262 None:intergenic 60.0%
GCAAGGCATATCCGGTGGTG+AGG - chr5_1:10100674-10100693 Msa0716620:intron 60.0%
! TGGTGAGGCGCGCATGCTTT+TGG - chr5_1:10100689-10100708 Msa0716620:intron 60.0%
! GGTGAGGCGCGCATGCTTTT+GGG - chr5_1:10100690-10100709 Msa0716620:intron 60.0%
! GCAAGGTGCTCAACCAAGCC+GGG + chr5_1:10101180-10101199 None:intergenic 60.0%
GAGCACCTTGCACTCCTCCA+AGG - chr5_1:10101189-10101208 Msa0716620:intron 60.0%
! CCCAACCTTGGAGGAGTGCA+AGG + chr5_1:10101197-10101216 None:intergenic 60.0%
CCCAGAAGCAGACCCAACCT+TGG + chr5_1:10101209-10101228 None:intergenic 60.0%
GCAACATGCAAGGCGCATCC+TGG - chr5_1:10101275-10101294 Msa0716620:intron 60.0%
!! GGGTGCAAGGTACCGACATC+AGG - chr5_1:10101309-10101328 Msa0716620:intron 60.0%
GCTAGACGTGGACCGTCATG+TGG - chr5_1:10095866-10095885 Msa0716620:CDS 60.0%
CTGGCTCAACGGCCACATGA+CGG + chr5_1:10104501-10104520 None:intergenic 60.0%
CGACGCAACTGATCCTCCTC+GGG - chr5_1:10096022-10096041 Msa0716620:CDS 60.0%
CTGCTTCGGAGTGACGCCTC+GGG + chr5_1:10097269-10097288 None:intergenic 65.0%
GCTGCTTCGGAGTGACGCCT+CGG + chr5_1:10097270-10097289 None:intergenic 65.0%
GGTCTTCCGGAGGAGCAGTG+TGG - chr5_1:10097297-10097316 Msa0716620:intron 65.0%
CCGCCAAAACCAGTGCGGGT+TGG - chr5_1:10097662-10097681 Msa0716620:intron 65.0%
! CCGAGGCACCTTGGAGGCTT+AGG + chr5_1:10098305-10098324 None:intergenic 65.0%
! GCTAGACCGAGGCACCTTGG+AGG + chr5_1:10098311-10098330 None:intergenic 65.0%
GGTGGCCGGGGTTTGAACTC+CGG + chr5_1:10098837-10098856 None:intergenic 65.0%
AAGCATGCGCGCCTCACCAC+CGG + chr5_1:10100688-10100707 None:intergenic 65.0%
! AGGCGCGCATGCTTTTGGGC+AGG - chr5_1:10100694-10100713 Msa0716620:intron 65.0%
! GGCGCGCATGCTTTTGGGCA+GGG - chr5_1:10100695-10100714 Msa0716620:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10095168 10105388 10095168 ID=Msa0716620;Name=Msa0716620
chr5_1 mRNA 10095168 10105388 10095168 ID=Msa0716620-mRNA-1;Parent=Msa0716620;Name=Msa0716620-mRNA-1;_AED=0.17;_eAED=0.17;_QI=91|0.63|0.5|1|0.54|0.41|12|0|580
chr5_1 exon 10095168 10095254 10095168 ID=Msa0716620-mRNA-1:exon:4098;Parent=Msa0716620-mRNA-1
chr5_1 exon 10095580 10095764 10095580 ID=Msa0716620-mRNA-1:exon:4097;Parent=Msa0716620-mRNA-1
chr5_1 exon 10095856 10096093 10095856 ID=Msa0716620-mRNA-1:exon:4096;Parent=Msa0716620-mRNA-1
chr5_1 exon 10096233 10096367 10096233 ID=Msa0716620-mRNA-1:exon:4095;Parent=Msa0716620-mRNA-1
chr5_1 exon 10096451 10096679 10096451 ID=Msa0716620-mRNA-1:exon:4094;Parent=Msa0716620-mRNA-1
chr5_1 exon 10103724 10103731 10103724 ID=Msa0716620-mRNA-1:exon:4093;Parent=Msa0716620-mRNA-1
chr5_1 exon 10103790 10103873 10103790 ID=Msa0716620-mRNA-1:exon:4092;Parent=Msa0716620-mRNA-1
chr5_1 exon 10104199 10104383 10104199 ID=Msa0716620-mRNA-1:exon:4091;Parent=Msa0716620-mRNA-1
chr5_1 exon 10104476 10104713 10104476 ID=Msa0716620-mRNA-1:exon:4090;Parent=Msa0716620-mRNA-1
chr5_1 exon 10104848 10104982 10104848 ID=Msa0716620-mRNA-1:exon:4089;Parent=Msa0716620-mRNA-1
chr5_1 exon 10105062 10105307 10105062 ID=Msa0716620-mRNA-1:exon:4088;Parent=Msa0716620-mRNA-1
chr5_1 exon 10105328 10105388 10105328 ID=Msa0716620-mRNA-1:exon:4087;Parent=Msa0716620-mRNA-1
chr5_1 five_prime_UTR 10105328 10105388 10105328 ID=Msa0716620-mRNA-1:five_prime_utr;Parent=Msa0716620-mRNA-1
chr5_1 five_prime_UTR 10105278 10105307 10105278 ID=Msa0716620-mRNA-1:five_prime_utr;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10105062 10105277 10105062 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10104848 10104982 10104848 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10104476 10104713 10104476 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10104199 10104383 10104199 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10103790 10103873 10103790 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10103724 10103731 10103724 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10096451 10096679 10096451 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10096233 10096367 10096233 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10095856 10096093 10095856 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10095580 10095764 10095580 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
chr5_1 CDS 10095168 10095254 10095168 ID=Msa0716620-mRNA-1:cds;Parent=Msa0716620-mRNA-1
Gene Sequence

>Msa0716620

ATGGCAACTGAAAACAAAATCCTCATCCTAGGACCAACAGGAGCCATTGGAAGACACATAGTTTGGGCAAGTATTAAAGCAGGAAATCCAACATATGCTTTGGTTAGAAAAACACCTGGCAATGTTAACAAGCCAAAGCTTATTACAGCTGCTAATCCTGAAACCAAGGAAGAGCTTATTGACAATTACCAATCTTTAGGAGTTATTCTACTTGAAGGTGATATAAATGATCATGAAACTCTTGTTAAGGCAATCAAGCAAGTTGATATTGTGATCTGTGCTGCTGGTAGACTACTAATTGAAGATCAGGTCAAAATTATTAAAGCAATTAAAGAAGCTGGAAACGTTAAGAAATTTTTCCCATCTGAATTTGGGCTAGACGTGGACCGTCATGAGGCAGTTGAGCCAGTTAGACAAGTTTTTGAAGAAAAAGCAAGTATCCGAAGAGTAATTGAATCCGAAGGAGTTCCTTACACTTACCTTTGTTGCCACGCCTTTACGGGTTACTTCTTACGTAACTTGGCTCAACTCGACGCAACTGATCCTCCTCGGGACAAAGTTGTCATTCTTGGAGATGGAAATGTGAAAGGAGCTTATGTAACTGAGGCTGATGTGGGAACTTTTACCATTAGAGCAGCAAATGATCCCAACACATTGAACAAAGCTGTCCATATTAGACTCCCCAAGAATTATTTGACCCAAAATGAGGTTATTGCTCTTTGGGAGAAAAAGATTGGAAAAACTCTTGAGAAAACTTATGTTTCAGAGGAACAAATTGATCCAGCCAAAGATATTGAAGCTTCTGAAGCCTATCCTGATGTGACATACACCACTGCTGATGAATATTTGAATCAATTTTTTCACAGTTATTTTTTTCCAATGGCAACTGAAAACAAAATCCTCATCCTAGGACCAACAGGAGCTATTGGAAGACACATAGTTTGGGCAAGTATTAAAGCAGGAAATCCAACATATGCTTTGGTTAGAAAAACACCTGGCAATGTTAACAAGCCAAAGCTTATTACAGCTGCTAATCCTGAAACCAAGGAAGAGCTTATTGATAATTACCAATCTTTAGGAGTTATTCTACTTGAAGGTGATATAAATGATCATGAAACTCTTGTTAAGGCAATCAAGCAAGTTGACATTGTGATCTGTGCTGCTGGTAGACTACTAATTGAGGATCAGGTCAAGATTATTAAAGCAATTAAAGAAGCTGGAAACGTTAAGAAATTTTTCCCATCTGAATTTGGGCTAGACGTGGACCGTCATGTGGCCGTTGAGCCAGTTAGACAAGTTTTTGAAGAAAAAGCAAGTATCCGAAGAGTAATTGAAGCCGAAGGAGTTCCTTACACTTACCTTTGTTGCCACGCCTTTACCGGTTACTTCTTACGTAACTTGGCTCAACTCGACGCAACTGATCCTCCTCGGGACAAAGTTGTCATTCTTGGAGATGGAAATGTGAAAGGAGCTTATGTAACTGAGGCTGATGTGGGAACTTTTACCATTAGAGCAGCAAATGATCCCAACACATTGAACAAAGCTGTCCATATTAGACTCCCCAAAAATTATTTGACCCAAAATGAGGTCATTGCCCTTTGGGAGAAAAAGATTGGGAAGACTCTTGAGAAAACTTATGTTTCAGAGGAACAAATTGATCCAGCCAAAGATATTGAAGCTTCTGAAGCCTATCCTGATGTGACATACACCACTGCTGATGAATATTTGAATCAATTTGTC

Protein sequence

>Msa0716620

MATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHEAVEPVRQVFEEKASIRRVIESEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQIDPAKDIEASEAYPDVTYTTADEYLNQFFHSYFFPMATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHVAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQIDPAKDIEASEAYPDVTYTTADEYLNQFV