Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824930 | XP_004497780.1 | 88.319 | 351 | 31 | 2 | 4 | 353 | 3 | 344 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824930 | sp|Q9SLN8|DBR_TOBAC | 61.473 | 353 | 126 | 2 | 1 | 353 | 1 | 343 | 3.12e-160 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824930 | A0A1S2Y2K2 | 88.319 | 351 | 31 | 2 | 4 | 353 | 3 | 344 | 0.0 | 635 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042420 | Msa0824930 | 0.800072 | 1.711050e-48 | -8.615850e-47 |
| Msa0061220 | Msa0824930 | 0.809949 | 1.469080e-50 | -8.615850e-47 |
| Msa0641130 | Msa0824930 | 0.814161 | 1.774052e-51 | -8.615850e-47 |
| Msa0743870 | Msa0824930 | 0.843349 | 1.479683e-58 | -8.615850e-47 |
| Msa0744640 | Msa0824930 | 0.816089 | 6.618170e-52 | -8.615850e-47 |
| Msa0787790 | Msa0824930 | 0.948222 | 1.446465e-106 | -8.615850e-47 |
| Msa0824930 | Msa0841730 | 0.814508 | 1.486866e-51 | -8.615850e-47 |
| Msa0824930 | Msa0852790 | 0.802571 | 5.267028e-49 | -8.615850e-47 |
| Msa0824930 | Msa0863990 | 0.899806 | 1.375082e-77 | -8.615850e-47 |
| Msa0824930 | Msa0870510 | 0.805766 | 1.139130e-49 | -8.615850e-47 |
| Msa0824930 | Msa1016960 | 0.821399 | 4.122186e-53 | -8.615850e-47 |
| Msa0824930 | Msa1058200 | 0.816322 | 5.870338e-52 | -8.615850e-47 |
| Msa0824930 | Msa1070540 | 0.815329 | 9.772836e-52 | -8.615850e-47 |
| Msa0824930 | Msa1101240 | 0.813814 | 2.115581e-51 | -8.615850e-47 |
| Msa0824930 | Msa1157670 | 0.810548 | 1.091515e-50 | -8.615850e-47 |
| Msa0824930 | Msa1212050 | 0.800328 | 1.517688e-48 | -8.615850e-47 |
| Msa0824930 | Msa1214170 | 0.802299 | 5.992512e-49 | -8.615850e-47 |
| Msa0824930 | Msa1218160 | 0.807851 | 4.131186e-50 | -8.615850e-47 |
| Msa0824930 | Msa1225580 | 0.830235 | 3.291875e-55 | -8.615850e-47 |
| Msa0824930 | Msa1260680 | 0.806272 | 8.914655e-50 | -8.615850e-47 |
| Msa0824930 | Msa1355510 | 0.832387 | 9.733901e-56 | -8.615850e-47 |
| Msa0824930 | Msa1407760 | 0.811740 | 6.018980e-51 | -8.615850e-47 |
| Msa0138900 | Msa0824930 | 0.810361 | 1.197370e-50 | -8.615850e-47 |
| Msa0151220 | Msa0824930 | 0.803438 | 3.486730e-49 | -8.615850e-47 |
| Msa0176260 | Msa0824930 | 0.802350 | 5.848296e-49 | -8.615850e-47 |
| Msa0380600 | Msa0824930 | 0.805683 | 1.185785e-49 | -8.615850e-47 |
| Msa0389900 | Msa0824930 | 0.835540 | 1.581696e-56 | -8.615850e-47 |
| Msa0430240 | Msa0824930 | 0.806911 | 6.537353e-50 | -8.615850e-47 |
| Msa0264680 | Msa0824930 | 0.832528 | 8.977327e-56 | -8.615850e-47 |
| Msa0279430 | Msa0824930 | 0.805870 | 1.083186e-49 | -8.615850e-47 |
| Msa0302730 | Msa0824930 | 0.835191 | 1.936782e-56 | -8.615850e-47 |
| Msa0545050 | Msa0824930 | 0.809621 | 1.728591e-50 | -8.615850e-47 |
| Msa0567370 | Msa0824930 | 0.812094 | 5.039431e-51 | -8.615850e-47 |
| Msa0584580 | Msa0824930 | 0.812671 | 3.770820e-51 | -8.615850e-47 |
| Msa0584600 | Msa0824930 | 0.812234 | 4.696380e-51 | -8.615850e-47 |
| Msa0600590 | Msa0824930 | 0.816677 | 4.888859e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824930 | MtrunA17_Chr8g0337361 | 61.429 | 350 | 126 | 1 | 4 | 353 | 62 | 402 | 2.94e-158 | 449 |
| Msa0824930 | MtrunA17_Chr8g0337471 | 60.399 | 351 | 129 | 2 | 4 | 353 | 3 | 344 | 2.09e-157 | 445 |
| Msa0824930 | MtrunA17_Chr8g0337491 | 59.167 | 360 | 126 | 3 | 4 | 351 | 3 | 353 | 5.37e-155 | 442 |
| Msa0824930 | MtrunA17_Chr8g0337451 | 58.807 | 352 | 133 | 3 | 4 | 353 | 3 | 344 | 9.97e-152 | 431 |
| Msa0824930 | MtrunA17_Chr4g0043061 | 58.640 | 353 | 134 | 3 | 3 | 353 | 8 | 350 | 5.11e-150 | 426 |
| Msa0824930 | MtrunA17_Chr8g0337371 | 59.714 | 350 | 131 | 2 | 4 | 353 | 498 | 837 | 2.22e-149 | 441 |
| Msa0824930 | MtrunA17_Chr8g0337371 | 57.849 | 344 | 135 | 2 | 4 | 347 | 51 | 384 | 1.61e-141 | 421 |
| Msa0824930 | MtrunA17_Chr7g0214831 | 59.605 | 354 | 127 | 4 | 4 | 353 | 5 | 346 | 6.38e-143 | 408 |
| Msa0824930 | MtrunA17_Chr8g0337481 | 65.018 | 283 | 90 | 1 | 71 | 353 | 12 | 285 | 1.77e-137 | 392 |
| Msa0824930 | MtrunA17_Chr2g0307121 | 43.099 | 355 | 187 | 4 | 4 | 353 | 2 | 346 | 1.02e-99 | 298 |
| Msa0824930 | MtrunA17_Chr8g0335881 | 60.444 | 225 | 80 | 1 | 4 | 228 | 3 | 218 | 6.44e-93 | 276 |
| Msa0824930 | MtrunA17_Chr5g0445921 | 90.625 | 128 | 12 | 0 | 224 | 351 | 9 | 136 | 1.97e-79 | 239 |
| Msa0824930 | MtrunA17_Chr2g0322531 | 39.607 | 356 | 200 | 6 | 1 | 350 | 1 | 347 | 2.71e-76 | 238 |
| Msa0824930 | MtrunA17_Chr2g0322551 | 40.059 | 337 | 182 | 8 | 1 | 328 | 1 | 326 | 6.52e-71 | 224 |
| Msa0824930 | MtrunA17_Chr2g0322541 | 38.730 | 315 | 176 | 6 | 23 | 329 | 22 | 327 | 2.07e-64 | 209 |
| Msa0824930 | MtrunA17_Chr5g0445911 | 100.000 | 52 | 0 | 0 | 25 | 76 | 1 | 52 | 1.94e-29 | 108 |
| Msa0824930 | MtrunA17_Chr4g0045041 | 35.321 | 218 | 124 | 5 | 139 | 350 | 416 | 622 | 3.29e-27 | 112 |
| Msa0824930 | MtrunA17_Chr4g0045061 | 34.862 | 218 | 125 | 5 | 139 | 350 | 416 | 622 | 1.32e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824930 | AT1G26320.1 | 62.323 | 353 | 119 | 4 | 5 | 353 | 9 | 351 | 6.54e-156 | 442 |
| Msa0824930 | AT1G26320.2 | 61.473 | 353 | 117 | 4 | 5 | 353 | 9 | 346 | 1.08e-152 | 433 |
| Msa0824930 | AT3G03080.1 | 59.943 | 352 | 128 | 3 | 5 | 353 | 9 | 350 | 3.98e-151 | 429 |
| Msa0824930 | AT5G16990.1 | 59.207 | 353 | 127 | 5 | 6 | 353 | 3 | 343 | 8.25e-151 | 428 |
| Msa0824930 | AT5G17000.1 | 59.322 | 354 | 126 | 5 | 6 | 353 | 4 | 345 | 1.53e-150 | 428 |
| Msa0824930 | AT5G16970.1 | 59.040 | 354 | 127 | 5 | 6 | 353 | 4 | 345 | 2.05e-150 | 427 |
| Msa0824930 | AT5G37940.1 | 58.146 | 356 | 130 | 5 | 5 | 353 | 10 | 353 | 2.23e-147 | 420 |
| Msa0824930 | AT5G37980.1 | 57.790 | 353 | 134 | 4 | 6 | 353 | 11 | 353 | 1.54e-146 | 418 |
| Msa0824930 | AT5G16960.2 | 57.880 | 349 | 133 | 4 | 7 | 351 | 6 | 344 | 6.98e-144 | 411 |
| Msa0824930 | AT5G16960.1 | 57.880 | 349 | 133 | 4 | 7 | 351 | 6 | 344 | 6.98e-144 | 411 |
| Msa0824930 | AT5G38000.1 | 56.374 | 353 | 135 | 5 | 6 | 351 | 11 | 351 | 6.96e-142 | 406 |
| Msa0824930 | AT5G38000.3 | 55.114 | 352 | 138 | 6 | 5 | 349 | 10 | 348 | 2.32e-136 | 392 |
| Msa0824930 | AT3G59845.1 | 53.371 | 356 | 151 | 5 | 1 | 351 | 1 | 346 | 2.88e-129 | 374 |
| Msa0824930 | AT1G65560.1 | 55.125 | 361 | 143 | 7 | 1 | 353 | 1 | 350 | 1.10e-127 | 370 |
| Msa0824930 | AT5G38000.2 | 52.691 | 353 | 129 | 6 | 6 | 351 | 11 | 332 | 2.28e-126 | 366 |
| Msa0824930 | AT5G16980.2 | 48.857 | 350 | 128 | 5 | 6 | 353 | 5 | 305 | 1.53e-110 | 325 |
| Msa0824930 | AT1G65560.2 | 57.651 | 281 | 104 | 4 | 78 | 353 | 4 | 274 | 2.45e-107 | 315 |
| Msa0824930 | AT5G16980.1 | 63.180 | 239 | 79 | 1 | 115 | 353 | 10 | 239 | 5.10e-107 | 313 |
| Msa0824930 | AT5G16980.3 | 63.180 | 239 | 79 | 1 | 115 | 353 | 10 | 239 | 5.10e-107 | 313 |
| Msa0824930 | AT3G59845.2 | 57.480 | 254 | 97 | 3 | 99 | 351 | 1 | 244 | 5.79e-101 | 298 |
| Msa0824930 | AT5G17000.2 | 58.009 | 231 | 79 | 5 | 5 | 229 | 3 | 221 | 2.87e-89 | 268 |
| Msa0824930 | AT1G49670.1 | 33.486 | 218 | 128 | 6 | 139 | 350 | 412 | 618 | 3.31e-23 | 101 |
| Msa0824930 | AT1G49670.2 | 33.491 | 212 | 124 | 6 | 145 | 350 | 441 | 641 | 7.34e-22 | 97.4 |
| Msa0824930 | AT5G37960.1 | 46.988 | 83 | 43 | 1 | 272 | 353 | 25 | 107 | 2.54e-15 | 71.6 |
Find 71 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACATAATCTCCTTTCTT+AGG | 0.186749 | 5_3:+64625036 | None:intergenic |
| TCTCAGCCAATTGTTGGATA+TGG | 0.212277 | 5_3:-64625356 | Msa0824930:intron |
| TTGTTCCTCCTTGTAATTAA+AGG | 0.220154 | 5_3:+64624778 | None:intergenic |
| GTCTTTATCTCTTCAGCATT+TGG | 0.257772 | 5_3:-64625018 | Msa0824930:CDS |
| AAATACATGTCTGTTTGTTT+TGG | 0.259959 | 5_3:+64625972 | None:intergenic |
| GATATATTGAAGAGCAAGTT+TGG | 0.261813 | 5_3:-64624812 | Msa0824930:CDS |
| GTACCTCTTTCCTATTATAC+TGG | 0.275241 | 5_3:-64625203 | Msa0824930:CDS |
| AGATGCTTCAGAAGCTGTTT+TGG | 0.292892 | 5_3:-64625916 | Msa0824930:CDS |
| ACAGCTTCTGAAGCATCTTT+AGG | 0.295485 | 5_3:+64625921 | None:intergenic |
| ACACAATATTGCCGTATGTT+AGG | 0.301864 | 5_3:-64624135 | Msa0824930:CDS |
| ACCAAGTAATCCAGTATAAT+AGG | 0.317896 | 5_3:+64625193 | None:intergenic |
| TTTAGGAAGTTGTAAACTAA+TGG | 0.368693 | 5_3:+64625938 | None:intergenic |
| CTAGCTTTAGACTACATAAC+TGG | 0.371537 | 5_3:-64625999 | Msa0824930:CDS |
| AAGTATATGTCTATTCCTTC+AGG | 0.376687 | 5_3:+64624361 | None:intergenic |
| TCCTATTATACTGGATTACT+TGG | 0.387026 | 5_3:-64625194 | Msa0824930:intron |
| TGTTTCTCTCAGCCAATTGT+TGG | 0.398931 | 5_3:-64625362 | Msa0824930:intron |
| CACAATATTGCCGTATGTTA+GGG | 0.402293 | 5_3:-64624134 | Msa0824930:CDS |
| AAGTGCTGGAAGTAAATATA+AGG | 0.404456 | 5_3:-64624938 | Msa0824930:CDS |
| CATACTCCATATCCAACAAT+TGG | 0.417973 | 5_3:+64625350 | None:intergenic |
| ACTTCTTCAATGTTGCATCT+AGG | 0.430401 | 5_3:+64624753 | None:intergenic |
| TCTTCAGCATTTGGTGCAGT+TGG | 0.434713 | 5_3:-64625009 | Msa0824930:CDS |
| GACATATACTTTGACAATGT+TGG | 0.436284 | 5_3:-64624349 | Msa0824930:CDS |
| AGACATAATCTCCTTTCTTA+GGG | 0.438933 | 5_3:+64625037 | None:intergenic |
| TGTTATGTTGTTGGAAGTGC+TGG | 0.440024 | 5_3:-64624952 | Msa0824930:CDS |
| ATATATTGAAGAGCAAGTTT+GGG | 0.445885 | 5_3:-64624811 | Msa0824930:CDS |
| TCGTTATGTACTTACTGAAT+CGG | 0.449422 | 5_3:+64625809 | None:intergenic |
| GTCACCAAATGGGAAGAGTA+TGG | 0.455053 | 5_3:-64625272 | Msa0824930:CDS |
| CGCGGTCGAATTGTGGTGGC+TGG | 0.464338 | 5_3:-64624286 | Msa0824930:CDS |
| TTTGATGAGGCTATCAGTCT+TGG | 0.465767 | 5_3:+64625241 | None:intergenic |
| TGGTCAACTAGCAAAATTGA+TGG | 0.468450 | 5_3:-64624977 | Msa0824930:CDS |
| TGGTTTGGGGAGTCACCAAA+TGG | 0.470534 | 5_3:-64625283 | Msa0824930:CDS |
| GGTGCAGTTGGTCAAATTGT+TGG | 0.473797 | 5_3:-64624997 | Msa0824930:CDS |
| ATTATATATGTAGGTATGCC+TGG | 0.474482 | 5_3:-64625096 | Msa0824930:intron |
| TTGATGGGATGTTATGTTGT+TGG | 0.475372 | 5_3:-64624961 | Msa0824930:CDS |
| AGAACAAGTGAGCAACAAAC+AGG | 0.480774 | 5_3:-64626024 | Msa0824930:CDS |
| CCTGGTATGACTGCTTATGC+AGG | 0.485648 | 5_3:-64625078 | Msa0824930:CDS |
| CGCGGCGTCTCATGTTAAGA+AGG | 0.487677 | 5_3:+64624305 | None:intergenic |
| ATGAGAGGAACCAAAAGAAC+AGG | 0.495779 | 5_3:-64625861 | Msa0824930:CDS |
| AACATTGCTTCTAATGCAGC+TGG | 0.496232 | 5_3:+64624061 | None:intergenic |
| GATGCCATACTCTTCCCATT+TGG | 0.498706 | 5_3:+64625268 | None:intergenic |
| TGATGAGGCCTTTAATTACA+AGG | 0.501845 | 5_3:-64624786 | Msa0824930:CDS |
| GAAGTTGGTGTCCCTAAGAA+AGG | 0.513037 | 5_3:-64625048 | Msa0824930:CDS |
| CGTTATGTACTTACTGAATC+GGG | 0.514254 | 5_3:+64625810 | None:intergenic |
| TATGCAGGTTTCTATGAAGT+TGG | 0.517868 | 5_3:-64625063 | Msa0824930:CDS |
| TATGTTGAAGATATAGCTAA+AGG | 0.521594 | 5_3:-64624097 | Msa0824930:CDS |
| ATCTTCCCTTCCCTAACATA+CGG | 0.525695 | 5_3:+64624124 | None:intergenic |
| ATGTTCACAGGCAAAAGTGC+TGG | 0.538532 | 5_3:-64624043 | Msa0824930:CDS |
| CCTGCATAAGCAGTCATACC+AGG | 0.538967 | 5_3:+64625078 | None:intergenic |
| CGGGAGAGAAGGAATAAAAG+AGG | 0.542739 | 5_3:+64625829 | None:intergenic |
| AAGTTGTAAACTAATGGTAG+AGG | 0.558112 | 5_3:+64625944 | None:intergenic |
| TAGCTAAAGGCATCGAGAGT+GGG | 0.559907 | 5_3:-64624084 | Msa0824930:CDS |
| AATCCAGTATAATAGGAAAG+AGG | 0.565113 | 5_3:+64625200 | None:intergenic |
| GTTGATAGGTACTTTCCTGA+AGG | 0.565387 | 5_3:-64624376 | Msa0824930:intron |
| GAGACGCCGCGGTCGAATTG+TGG | 0.565480 | 5_3:-64624293 | Msa0824930:CDS |
| TCTTGTGATCCTTACATGAG+AGG | 0.570442 | 5_3:-64625876 | Msa0824930:CDS |
| ATATACTTTGACAATGTTGG+TGG | 0.576525 | 5_3:-64624346 | Msa0824930:CDS |
| ATATGGAGTATGCAAAGTGT+TGG | 0.578801 | 5_3:-64625339 | Msa0824930:CDS |
| GAGCAAGTTTGGGTTTGATG+AGG | 0.579277 | 5_3:-64624801 | Msa0824930:CDS |
| GCATTAGAAGCAATGTTCAC+AGG | 0.584098 | 5_3:-64624055 | Msa0824930:CDS |
| GGTTTGGGGAGTCACCAAAT+GGG | 0.589430 | 5_3:-64625282 | Msa0824930:CDS |
| ACTTACTGAATCGGGAGAGA+AGG | 0.593515 | 5_3:+64625818 | None:intergenic |
| ATATTGCCGTATGTTAGGGA+AGG | 0.608231 | 5_3:-64624130 | Msa0824930:CDS |
| ATAGCTAAAGGCATCGAGAG+TGG | 0.621489 | 5_3:-64624085 | Msa0824930:CDS |
| TATTGCCGTATGTTAGGGAA+GGG | 0.629740 | 5_3:-64624129 | Msa0824930:CDS |
| GCGGCGTCTCATGTTAAGAA+GGG | 0.635176 | 5_3:+64624306 | None:intergenic |
| TATGAACTTGATGAACCTCA+AGG | 0.637072 | 5_3:-64624250 | Msa0824930:CDS |
| GGTCAACTAGCAAAATTGAT+GGG | 0.646505 | 5_3:-64624976 | Msa0824930:CDS |
| ACGCCGCGGTCGAATTGTGG+TGG | 0.652143 | 5_3:-64624290 | Msa0824930:CDS |
| TGAGGCCTTTAATTACAAGG+AGG | 0.704335 | 5_3:-64624783 | Msa0824930:CDS |
| CTTCTTAACATGAGACGCCG+CGG | 0.740483 | 5_3:-64624304 | Msa0824930:CDS |
| CAGCCACCACAATTCGACCG+CGG | 0.745630 | 5_3:+64624287 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTAAAGGTATACT+TGG | + | chr5_3:64624381-64624400 | None:intergenic | 15.0% |
| !!! | TGTAGACAATTTTAATTTAA+AGG | + | chr5_3:64624390-64624409 | None:intergenic | 15.0% |
| !! | TAATGAGTTATTATATATGT+AGG | - | chr5_3:64624936-64624955 | Msa0824930:CDS | 15.0% |
| !! | ATTTATTTATCTAGTATGAA+GGG | - | chr5_3:64625160-64625179 | Msa0824930:intron | 15.0% |
| !!! | TTTTAATTTAAAGGTATACT+TGG | + | chr5_3:64624381-64624400 | None:intergenic | 15.0% |
| !!! | TGTAGACAATTTTAATTTAA+AGG | + | chr5_3:64624390-64624409 | None:intergenic | 15.0% |
| !! | TAATGAGTTATTATATATGT+AGG | - | chr5_3:64624936-64624955 | Msa0824930:CDS | 15.0% |
| !! | ATTTATTTATCTAGTATGAA+GGG | - | chr5_3:64625160-64625179 | Msa0824930:intron | 15.0% |
| !! | AGCGATAAATTAATTCAAAT+CGG | + | chr5_3:64624457-64624476 | None:intergenic | 20.0% |
| !! | TTGAATTAATTTATCGCTTA+AGG | - | chr5_3:64624459-64624478 | Msa0824930:intron | 20.0% |
| !! | TGCTATGATTAAGTATTATA+AGG | - | chr5_3:64624606-64624625 | Msa0824930:intron | 20.0% |
| !! | AAACATCCAAATTTCAAAAA+AGG | - | chr5_3:64624730-64624749 | Msa0824930:intron | 20.0% |
| !! | CATTTATTTATCTAGTATGA+AGG | - | chr5_3:64625159-64625178 | Msa0824930:intron | 20.0% |
| !!! | AAGTGAAATTTTTTACTAGT+CGG | + | chr5_3:64625390-64625409 | None:intergenic | 20.0% |
| !! | ACTAGTAAAAAATTTCACTT+AGG | - | chr5_3:64625390-64625409 | Msa0824930:intron | 20.0% |
| !! | GCATTCATTAAAAAAAAAGT+TGG | + | chr5_3:64625610-64625629 | None:intergenic | 20.0% |
| !!! | TCATTTATATCCTAAGTTTT+TGG | - | chr5_3:64625883-64625902 | Msa0824930:CDS | 20.0% |
| !! | AGCGATAAATTAATTCAAAT+CGG | + | chr5_3:64624457-64624476 | None:intergenic | 20.0% |
| !! | TTGAATTAATTTATCGCTTA+AGG | - | chr5_3:64624459-64624478 | Msa0824930:intron | 20.0% |
| !! | TGCTATGATTAAGTATTATA+AGG | - | chr5_3:64624606-64624625 | Msa0824930:intron | 20.0% |
| !! | AAACATCCAAATTTCAAAAA+AGG | - | chr5_3:64624730-64624749 | Msa0824930:intron | 20.0% |
| !! | CATTTATTTATCTAGTATGA+AGG | - | chr5_3:64625159-64625178 | Msa0824930:intron | 20.0% |
| !!! | AAGTGAAATTTTTTACTAGT+CGG | + | chr5_3:64625390-64625409 | None:intergenic | 20.0% |
| !! | ACTAGTAAAAAATTTCACTT+AGG | - | chr5_3:64625390-64625409 | Msa0824930:intron | 20.0% |
| !! | GCATTCATTAAAAAAAAAGT+TGG | + | chr5_3:64625610-64625629 | None:intergenic | 20.0% |
| !!! | TCATTTATATCCTAAGTTTT+TGG | - | chr5_3:64625883-64625902 | Msa0824930:CDS | 20.0% |
| !! | AAATACATGTCTGTTTGTTT+TGG | + | chr5_3:64624072-64624091 | None:intergenic | 25.0% |
| ! | TTTAGGAAGTTGTAAACTAA+TGG | + | chr5_3:64624106-64624125 | None:intergenic | 25.0% |
| ! | TGATAGAACCACAATTAATT+TGG | + | chr5_3:64624322-64624341 | None:intergenic | 25.0% |
| ! | ATTCAAATCGGTTGTAAAAA+TGG | + | chr5_3:64624445-64624464 | None:intergenic | 25.0% |
| ! | ACAAATTATGTTGGAACTAA+GGG | - | chr5_3:64624567-64624586 | Msa0824930:intron | 25.0% |
| !!! | AAGTCTCCTTTTTTGAAATT+TGG | + | chr5_3:64624739-64624758 | None:intergenic | 25.0% |
| ! | AAATTTCAAAAAAGGAGACT+TGG | - | chr5_3:64624738-64624757 | Msa0824930:intron | 25.0% |
| ! | TGTGTTCATGTCAATAAATA+AGG | - | chr5_3:64625204-64625223 | Msa0824930:CDS | 25.0% |
| ! | ATATATTGAAGAGCAAGTTT+GGG | - | chr5_3:64625230-64625249 | Msa0824930:CDS | 25.0% |
| ! | ACTTGTATACCAAAATTATC+AGG | - | chr5_3:64625351-64625370 | Msa0824930:CDS | 25.0% |
| ! | CTTGTATACCAAAATTATCA+GGG | - | chr5_3:64625352-64625371 | Msa0824930:CDS | 25.0% |
| ! | TAGAATACAATACTTGCTTT+AGG | - | chr5_3:64625459-64625478 | Msa0824930:intron | 25.0% |
| ! | TTACTTGTTCAATTGTTCAT+AGG | + | chr5_3:64625516-64625535 | None:intergenic | 25.0% |
| ! | AAGTAATGATCAAGAATCTA+AGG | - | chr5_3:64625530-64625549 | Msa0824930:intron | 25.0% |
| !!! | ATTAAGTTTTTTATGCCTTG+AGG | + | chr5_3:64625809-64625828 | None:intergenic | 25.0% |
| ! | AATATTGTGTCCAAAAACTT+AGG | + | chr5_3:64625896-64625915 | None:intergenic | 25.0% |
| ! | TATGTTGAAGATATAGCTAA+AGG | - | chr5_3:64625944-64625963 | Msa0824930:CDS | 25.0% |
| !! | AAATACATGTCTGTTTGTTT+TGG | + | chr5_3:64624072-64624091 | None:intergenic | 25.0% |
| ! | TTTAGGAAGTTGTAAACTAA+TGG | + | chr5_3:64624106-64624125 | None:intergenic | 25.0% |
| ! | TGATAGAACCACAATTAATT+TGG | + | chr5_3:64624322-64624341 | None:intergenic | 25.0% |
| ! | ATTCAAATCGGTTGTAAAAA+TGG | + | chr5_3:64624445-64624464 | None:intergenic | 25.0% |
| ! | ACAAATTATGTTGGAACTAA+GGG | - | chr5_3:64624567-64624586 | Msa0824930:intron | 25.0% |
| !!! | AAGTCTCCTTTTTTGAAATT+TGG | + | chr5_3:64624739-64624758 | None:intergenic | 25.0% |
| ! | AAATTTCAAAAAAGGAGACT+TGG | - | chr5_3:64624738-64624757 | Msa0824930:intron | 25.0% |
| ! | TGTGTTCATGTCAATAAATA+AGG | - | chr5_3:64625204-64625223 | Msa0824930:CDS | 25.0% |
| ! | ATATATTGAAGAGCAAGTTT+GGG | - | chr5_3:64625230-64625249 | Msa0824930:CDS | 25.0% |
| ! | ACTTGTATACCAAAATTATC+AGG | - | chr5_3:64625351-64625370 | Msa0824930:CDS | 25.0% |
| ! | CTTGTATACCAAAATTATCA+GGG | - | chr5_3:64625352-64625371 | Msa0824930:CDS | 25.0% |
| ! | TAGAATACAATACTTGCTTT+AGG | - | chr5_3:64625459-64625478 | Msa0824930:intron | 25.0% |
| ! | TTACTTGTTCAATTGTTCAT+AGG | + | chr5_3:64625516-64625535 | None:intergenic | 25.0% |
| ! | AAGTAATGATCAAGAATCTA+AGG | - | chr5_3:64625530-64625549 | Msa0824930:intron | 25.0% |
| !!! | ATTAAGTTTTTTATGCCTTG+AGG | + | chr5_3:64625809-64625828 | None:intergenic | 25.0% |
| ! | AATATTGTGTCCAAAAACTT+AGG | + | chr5_3:64625896-64625915 | None:intergenic | 25.0% |
| ! | TATGTTGAAGATATAGCTAA+AGG | - | chr5_3:64625944-64625963 | Msa0824930:CDS | 25.0% |
| AAGTTGTAAACTAATGGTAG+AGG | + | chr5_3:64624100-64624119 | None:intergenic | 30.0% | |
| TCGTTATGTACTTACTGAAT+CGG | + | chr5_3:64624235-64624254 | None:intergenic | 30.0% | |
| ! | GAACCACAATTAATTTGGAA+CGG | + | chr5_3:64624317-64624336 | None:intergenic | 30.0% |
| TAGTCATGTAGACAAAGTAA+TGG | + | chr5_3:64624419-64624438 | None:intergenic | 30.0% | |
| GACAAATTATGTTGGAACTA+AGG | - | chr5_3:64624566-64624585 | Msa0824930:intron | 30.0% | |
| TATGTGATTATCTCTTCTAG+AGG | - | chr5_3:64624635-64624654 | Msa0824930:intron | 30.0% | |
| AATCCAGTATAATAGGAAAG+AGG | + | chr5_3:64624844-64624863 | None:intergenic | 30.0% | |
| TCCTATTATACTGGATTACT+TGG | - | chr5_3:64624847-64624866 | Msa0824930:intron | 30.0% | |
| ACCAAGTAATCCAGTATAAT+AGG | + | chr5_3:64624851-64624870 | None:intergenic | 30.0% | |
| ATTATATATGTAGGTATGCC+TGG | - | chr5_3:64624945-64624964 | Msa0824930:CDS | 30.0% | |
| AGACATAATCTCCTTTCTTA+GGG | + | chr5_3:64625007-64625026 | None:intergenic | 30.0% | |
| AAGACATAATCTCCTTTCTT+AGG | + | chr5_3:64625008-64625027 | None:intergenic | 30.0% | |
| !! | AAGTGCTGGAAGTAAATATA+AGG | - | chr5_3:64625103-64625122 | Msa0824930:intron | 30.0% |
| GATATATTGAAGAGCAAGTT+TGG | - | chr5_3:64625229-64625248 | Msa0824930:CDS | 30.0% | |
| TTGTTCCTCCTTGTAATTAA+AGG | + | chr5_3:64625266-64625285 | None:intergenic | 30.0% | |
| CTAATCTTAGCTGAGAAAAA+TGG | + | chr5_3:64625560-64625579 | None:intergenic | 30.0% | |
| GTTCTGTTTCAATTGTTGAT+AGG | - | chr5_3:64625651-64625670 | Msa0824930:intron | 30.0% | |
| AAGTATATGTCTATTCCTTC+AGG | + | chr5_3:64625683-64625702 | None:intergenic | 30.0% | |
| GACATATACTTTGACAATGT+TGG | - | chr5_3:64625692-64625711 | Msa0824930:intron | 30.0% | |
| ATATACTTTGACAATGTTGG+TGG | - | chr5_3:64625695-64625714 | Msa0824930:intron | 30.0% | |
| AAGTTGTAAACTAATGGTAG+AGG | + | chr5_3:64624100-64624119 | None:intergenic | 30.0% | |
| TCGTTATGTACTTACTGAAT+CGG | + | chr5_3:64624235-64624254 | None:intergenic | 30.0% | |
| ! | GAACCACAATTAATTTGGAA+CGG | + | chr5_3:64624317-64624336 | None:intergenic | 30.0% |
| TAGTCATGTAGACAAAGTAA+TGG | + | chr5_3:64624419-64624438 | None:intergenic | 30.0% | |
| GACAAATTATGTTGGAACTA+AGG | - | chr5_3:64624566-64624585 | Msa0824930:intron | 30.0% | |
| TATGTGATTATCTCTTCTAG+AGG | - | chr5_3:64624635-64624654 | Msa0824930:intron | 30.0% | |
| AATCCAGTATAATAGGAAAG+AGG | + | chr5_3:64624844-64624863 | None:intergenic | 30.0% | |
| TCCTATTATACTGGATTACT+TGG | - | chr5_3:64624847-64624866 | Msa0824930:intron | 30.0% | |
| ACCAAGTAATCCAGTATAAT+AGG | + | chr5_3:64624851-64624870 | None:intergenic | 30.0% | |
| ATTATATATGTAGGTATGCC+TGG | - | chr5_3:64624945-64624964 | Msa0824930:CDS | 30.0% | |
| AGACATAATCTCCTTTCTTA+GGG | + | chr5_3:64625007-64625026 | None:intergenic | 30.0% | |
| AAGACATAATCTCCTTTCTT+AGG | + | chr5_3:64625008-64625027 | None:intergenic | 30.0% | |
| !! | AAGTGCTGGAAGTAAATATA+AGG | - | chr5_3:64625103-64625122 | Msa0824930:intron | 30.0% |
| GATATATTGAAGAGCAAGTT+TGG | - | chr5_3:64625229-64625248 | Msa0824930:CDS | 30.0% | |
| TTGTTCCTCCTTGTAATTAA+AGG | + | chr5_3:64625266-64625285 | None:intergenic | 30.0% | |
| CTAATCTTAGCTGAGAAAAA+TGG | + | chr5_3:64625560-64625579 | None:intergenic | 30.0% | |
| GTTCTGTTTCAATTGTTGAT+AGG | - | chr5_3:64625651-64625670 | Msa0824930:intron | 30.0% | |
| AAGTATATGTCTATTCCTTC+AGG | + | chr5_3:64625683-64625702 | None:intergenic | 30.0% | |
| GACATATACTTTGACAATGT+TGG | - | chr5_3:64625692-64625711 | Msa0824930:intron | 30.0% | |
| ATATACTTTGACAATGTTGG+TGG | - | chr5_3:64625695-64625714 | Msa0824930:intron | 30.0% | |
| !! | CTAGCTTTAGACTACATAAC+TGG | - | chr5_3:64624042-64624061 | Msa0824930:CDS | 35.0% |
| !!! | GTTGTTTTTGCCTGTTCTTT+TGG | + | chr5_3:64624193-64624212 | None:intergenic | 35.0% |
| CGTTATGTACTTACTGAATC+GGG | + | chr5_3:64624234-64624253 | None:intergenic | 35.0% | |
| ! | CACAATTAATTTGGAACGGA+TGG | + | chr5_3:64624313-64624332 | None:intergenic | 35.0% |
| CATCCGTTCCAAATTAATTG+TGG | - | chr5_3:64624311-64624330 | Msa0824930:CDS | 35.0% | |
| ! | CCAACATAATTTGTCGTCTT+AGG | + | chr5_3:64624561-64624580 | None:intergenic | 35.0% |
| CCTAAGACGACAAATTATGT+TGG | - | chr5_3:64624558-64624577 | Msa0824930:intron | 35.0% | |
| CATACTCCATATCCAACAAT+TGG | + | chr5_3:64624694-64624713 | None:intergenic | 35.0% | |
| ATATGGAGTATGCAAAGTGT+TGG | - | chr5_3:64624702-64624721 | Msa0824930:intron | 35.0% | |
| ! | TCAAAAAAGGAGACTTGGTT+TGG | - | chr5_3:64624743-64624762 | Msa0824930:intron | 35.0% |
| ! | CAAAAAAGGAGACTTGGTTT+GGG | - | chr5_3:64624744-64624763 | Msa0824930:intron | 35.0% |
| ! | AAAAAAGGAGACTTGGTTTG+GGG | - | chr5_3:64624745-64624764 | Msa0824930:intron | 35.0% |
| GTACCTCTTTCCTATTATAC+TGG | - | chr5_3:64624838-64624857 | Msa0824930:intron | 35.0% | |
| TATGCAGGTTTCTATGAAGT+TGG | - | chr5_3:64624978-64624997 | Msa0824930:CDS | 35.0% | |
| GTCTTTATCTCTTCAGCATT+TGG | - | chr5_3:64625023-64625042 | Msa0824930:CDS | 35.0% | |
| TGGTCAACTAGCAAAATTGA+TGG | - | chr5_3:64625064-64625083 | Msa0824930:CDS | 35.0% | |
| GGTCAACTAGCAAAATTGAT+GGG | - | chr5_3:64625065-64625084 | Msa0824930:CDS | 35.0% | |
| TTGATGGGATGTTATGTTGT+TGG | - | chr5_3:64625080-64625099 | Msa0824930:CDS | 35.0% | |
| TGATGAGGCCTTTAATTACA+AGG | - | chr5_3:64625255-64625274 | Msa0824930:CDS | 35.0% | |
| ACTTCTTCAATGTTGCATCT+AGG | + | chr5_3:64625291-64625310 | None:intergenic | 35.0% | |
| GTTCATAGGATAATTAACGC+CGG | + | chr5_3:64625502-64625521 | None:intergenic | 35.0% | |
| TATGAACTTGATGAACCTCA+AGG | - | chr5_3:64625791-64625810 | Msa0824930:intron | 35.0% | |
| ACACAATATTGCCGTATGTT+AGG | - | chr5_3:64625906-64625925 | Msa0824930:CDS | 35.0% | |
| CACAATATTGCCGTATGTTA+GGG | - | chr5_3:64625907-64625926 | Msa0824930:CDS | 35.0% | |
| !! | CTAGCTTTAGACTACATAAC+TGG | - | chr5_3:64624042-64624061 | Msa0824930:CDS | 35.0% |
| !!! | GTTGTTTTTGCCTGTTCTTT+TGG | + | chr5_3:64624193-64624212 | None:intergenic | 35.0% |
| CGTTATGTACTTACTGAATC+GGG | + | chr5_3:64624234-64624253 | None:intergenic | 35.0% | |
| ! | CACAATTAATTTGGAACGGA+TGG | + | chr5_3:64624313-64624332 | None:intergenic | 35.0% |
| CATCCGTTCCAAATTAATTG+TGG | - | chr5_3:64624311-64624330 | Msa0824930:CDS | 35.0% | |
| ! | CCAACATAATTTGTCGTCTT+AGG | + | chr5_3:64624561-64624580 | None:intergenic | 35.0% |
| CCTAAGACGACAAATTATGT+TGG | - | chr5_3:64624558-64624577 | Msa0824930:intron | 35.0% | |
| CATACTCCATATCCAACAAT+TGG | + | chr5_3:64624694-64624713 | None:intergenic | 35.0% | |
| ATATGGAGTATGCAAAGTGT+TGG | - | chr5_3:64624702-64624721 | Msa0824930:intron | 35.0% | |
| ! | TCAAAAAAGGAGACTTGGTT+TGG | - | chr5_3:64624743-64624762 | Msa0824930:intron | 35.0% |
| ! | CAAAAAAGGAGACTTGGTTT+GGG | - | chr5_3:64624744-64624763 | Msa0824930:intron | 35.0% |
| ! | AAAAAAGGAGACTTGGTTTG+GGG | - | chr5_3:64624745-64624764 | Msa0824930:intron | 35.0% |
| GTACCTCTTTCCTATTATAC+TGG | - | chr5_3:64624838-64624857 | Msa0824930:intron | 35.0% | |
| TATGCAGGTTTCTATGAAGT+TGG | - | chr5_3:64624978-64624997 | Msa0824930:CDS | 35.0% | |
| GTCTTTATCTCTTCAGCATT+TGG | - | chr5_3:64625023-64625042 | Msa0824930:CDS | 35.0% | |
| TGGTCAACTAGCAAAATTGA+TGG | - | chr5_3:64625064-64625083 | Msa0824930:CDS | 35.0% | |
| GGTCAACTAGCAAAATTGAT+GGG | - | chr5_3:64625065-64625084 | Msa0824930:CDS | 35.0% | |
| TTGATGGGATGTTATGTTGT+TGG | - | chr5_3:64625080-64625099 | Msa0824930:CDS | 35.0% | |
| TGATGAGGCCTTTAATTACA+AGG | - | chr5_3:64625255-64625274 | Msa0824930:CDS | 35.0% | |
| ACTTCTTCAATGTTGCATCT+AGG | + | chr5_3:64625291-64625310 | None:intergenic | 35.0% | |
| GTTCATAGGATAATTAACGC+CGG | + | chr5_3:64625502-64625521 | None:intergenic | 35.0% | |
| TATGAACTTGATGAACCTCA+AGG | - | chr5_3:64625791-64625810 | Msa0824930:intron | 35.0% | |
| ACACAATATTGCCGTATGTT+AGG | - | chr5_3:64625906-64625925 | Msa0824930:CDS | 35.0% | |
| CACAATATTGCCGTATGTTA+GGG | - | chr5_3:64625907-64625926 | Msa0824930:CDS | 35.0% | |
| AGAACAAGTGAGCAACAAAC+AGG | - | chr5_3:64624017-64624036 | Msa0824930:CDS | 40.0% | |
| !! | ACAGCTTCTGAAGCATCTTT+AGG | + | chr5_3:64624123-64624142 | None:intergenic | 40.0% |
| ! | AGATGCTTCAGAAGCTGTTT+TGG | - | chr5_3:64624125-64624144 | Msa0824930:CDS | 40.0% |
| TCTTGTGATCCTTACATGAG+AGG | - | chr5_3:64624165-64624184 | Msa0824930:CDS | 40.0% | |
| !!! | CTTTTGGTTCCTCTCATGTA+AGG | + | chr5_3:64624177-64624196 | None:intergenic | 40.0% |
| ATGAGAGGAACCAAAAGAAC+AGG | - | chr5_3:64624180-64624199 | Msa0824930:CDS | 40.0% | |
| ! | GAACGTCGCAACACTTATTT+TGG | + | chr5_3:64624348-64624367 | None:intergenic | 40.0% |
| AGTTAAACTGTAACACCTCG+TGG | - | chr5_3:64624488-64624507 | Msa0824930:intron | 40.0% | |
| TAAAGAATGTTGTGTCCACG+AGG | + | chr5_3:64624506-64624525 | None:intergenic | 40.0% | |
| TGTTTCTCTCAGCCAATTGT+TGG | - | chr5_3:64624679-64624698 | Msa0824930:intron | 40.0% | |
| TCTCAGCCAATTGTTGGATA+TGG | - | chr5_3:64624685-64624704 | Msa0824930:intron | 40.0% | |
| TTTGATGAGGCTATCAGTCT+TGG | + | chr5_3:64624803-64624822 | None:intergenic | 40.0% | |
| !! | CAGCATGCTCAATTTTGATG+AGG | + | chr5_3:64624816-64624835 | None:intergenic | 40.0% |
| ! | TGTTATGTTGTTGGAAGTGC+TGG | - | chr5_3:64625089-64625108 | Msa0824930:intron | 40.0% |
| TGAGGCCTTTAATTACAAGG+AGG | - | chr5_3:64625258-64625277 | Msa0824930:CDS | 40.0% | |
| ! | TTGGATCGCCCTGATAATTT+TGG | + | chr5_3:64625363-64625382 | None:intergenic | 40.0% |
| AAAATTATCAGGGCGATCCA+AGG | - | chr5_3:64625362-64625381 | Msa0824930:intron | 40.0% | |
| AAATTATCAGGGCGATCCAA+GGG | - | chr5_3:64625363-64625382 | Msa0824930:intron | 40.0% | |
| !!! | TTTTTTACTAGTCGGTCCCT+TGG | + | chr5_3:64625382-64625401 | None:intergenic | 40.0% |
| !!! | TTTAGGCCTCACTTTTTGCT+GGG | - | chr5_3:64625476-64625495 | Msa0824930:intron | 40.0% |
| ! | GTTGATAGGTACTTTCCTGA+AGG | - | chr5_3:64625665-64625684 | Msa0824930:intron | 40.0% |
| ATATTGCCGTATGTTAGGGA+AGG | - | chr5_3:64625911-64625930 | Msa0824930:CDS | 40.0% | |
| TATTGCCGTATGTTAGGGAA+GGG | - | chr5_3:64625912-64625931 | Msa0824930:CDS | 40.0% | |
| ATCTTCCCTTCCCTAACATA+CGG | + | chr5_3:64625920-64625939 | None:intergenic | 40.0% | |
| AACATTGCTTCTAATGCAGC+TGG | + | chr5_3:64625983-64626002 | None:intergenic | 40.0% | |
| GCATTAGAAGCAATGTTCAC+AGG | - | chr5_3:64625986-64626005 | Msa0824930:CDS | 40.0% | |
| AGAACAAGTGAGCAACAAAC+AGG | - | chr5_3:64624017-64624036 | Msa0824930:CDS | 40.0% | |
| !! | ACAGCTTCTGAAGCATCTTT+AGG | + | chr5_3:64624123-64624142 | None:intergenic | 40.0% |
| ! | AGATGCTTCAGAAGCTGTTT+TGG | - | chr5_3:64624125-64624144 | Msa0824930:CDS | 40.0% |
| TCTTGTGATCCTTACATGAG+AGG | - | chr5_3:64624165-64624184 | Msa0824930:CDS | 40.0% | |
| !!! | CTTTTGGTTCCTCTCATGTA+AGG | + | chr5_3:64624177-64624196 | None:intergenic | 40.0% |
| ATGAGAGGAACCAAAAGAAC+AGG | - | chr5_3:64624180-64624199 | Msa0824930:CDS | 40.0% | |
| ! | GAACGTCGCAACACTTATTT+TGG | + | chr5_3:64624348-64624367 | None:intergenic | 40.0% |
| AGTTAAACTGTAACACCTCG+TGG | - | chr5_3:64624488-64624507 | Msa0824930:intron | 40.0% | |
| TAAAGAATGTTGTGTCCACG+AGG | + | chr5_3:64624506-64624525 | None:intergenic | 40.0% | |
| TGTTTCTCTCAGCCAATTGT+TGG | - | chr5_3:64624679-64624698 | Msa0824930:intron | 40.0% | |
| TCTCAGCCAATTGTTGGATA+TGG | - | chr5_3:64624685-64624704 | Msa0824930:intron | 40.0% | |
| TTTGATGAGGCTATCAGTCT+TGG | + | chr5_3:64624803-64624822 | None:intergenic | 40.0% | |
| !! | CAGCATGCTCAATTTTGATG+AGG | + | chr5_3:64624816-64624835 | None:intergenic | 40.0% |
| ! | TGTTATGTTGTTGGAAGTGC+TGG | - | chr5_3:64625089-64625108 | Msa0824930:intron | 40.0% |
| TGAGGCCTTTAATTACAAGG+AGG | - | chr5_3:64625258-64625277 | Msa0824930:CDS | 40.0% | |
| ! | TTGGATCGCCCTGATAATTT+TGG | + | chr5_3:64625363-64625382 | None:intergenic | 40.0% |
| AAAATTATCAGGGCGATCCA+AGG | - | chr5_3:64625362-64625381 | Msa0824930:intron | 40.0% | |
| AAATTATCAGGGCGATCCAA+GGG | - | chr5_3:64625363-64625382 | Msa0824930:intron | 40.0% | |
| !!! | TTTTTTACTAGTCGGTCCCT+TGG | + | chr5_3:64625382-64625401 | None:intergenic | 40.0% |
| !!! | TTTAGGCCTCACTTTTTGCT+GGG | - | chr5_3:64625476-64625495 | Msa0824930:intron | 40.0% |
| ! | GTTGATAGGTACTTTCCTGA+AGG | - | chr5_3:64625665-64625684 | Msa0824930:intron | 40.0% |
| ATATTGCCGTATGTTAGGGA+AGG | - | chr5_3:64625911-64625930 | Msa0824930:CDS | 40.0% | |
| TATTGCCGTATGTTAGGGAA+GGG | - | chr5_3:64625912-64625931 | Msa0824930:CDS | 40.0% | |
| ATCTTCCCTTCCCTAACATA+CGG | + | chr5_3:64625920-64625939 | None:intergenic | 40.0% | |
| AACATTGCTTCTAATGCAGC+TGG | + | chr5_3:64625983-64626002 | None:intergenic | 40.0% | |
| GCATTAGAAGCAATGTTCAC+AGG | - | chr5_3:64625986-64626005 | Msa0824930:CDS | 40.0% | |
| CGGGAGAGAAGGAATAAAAG+AGG | + | chr5_3:64624215-64624234 | None:intergenic | 45.0% | |
| ACTTACTGAATCGGGAGAGA+AGG | + | chr5_3:64624226-64624245 | None:intergenic | 45.0% | |
| GTCACCAAATGGGAAGAGTA+TGG | - | chr5_3:64624769-64624788 | Msa0824930:CDS | 45.0% | |
| GATGCCATACTCTTCCCATT+TGG | + | chr5_3:64624776-64624795 | None:intergenic | 45.0% | |
| !! | GAAGTTGGTGTCCCTAAGAA+AGG | - | chr5_3:64624993-64625012 | Msa0824930:CDS | 45.0% |
| !! | TCTTCAGCATTTGGTGCAGT+TGG | - | chr5_3:64625032-64625051 | Msa0824930:CDS | 45.0% |
| GGTGCAGTTGGTCAAATTGT+TGG | - | chr5_3:64625044-64625063 | Msa0824930:CDS | 45.0% | |
| ! | GAGCAAGTTTGGGTTTGATG+AGG | - | chr5_3:64625240-64625259 | Msa0824930:CDS | 45.0% |
| !!! | CTTTAGGCCTCACTTTTTGC+TGG | - | chr5_3:64625475-64625494 | Msa0824930:intron | 45.0% |
| !! | ATAGCTAAAGGCATCGAGAG+TGG | - | chr5_3:64625956-64625975 | Msa0824930:CDS | 45.0% |
| !! | TAGCTAAAGGCATCGAGAGT+GGG | - | chr5_3:64625957-64625976 | Msa0824930:CDS | 45.0% |
| ! | ATGTTCACAGGCAAAAGTGC+TGG | - | chr5_3:64625998-64626017 | Msa0824930:CDS | 45.0% |
| CGGGAGAGAAGGAATAAAAG+AGG | + | chr5_3:64624215-64624234 | None:intergenic | 45.0% | |
| ACTTACTGAATCGGGAGAGA+AGG | + | chr5_3:64624226-64624245 | None:intergenic | 45.0% | |
| GTCACCAAATGGGAAGAGTA+TGG | - | chr5_3:64624769-64624788 | Msa0824930:CDS | 45.0% | |
| GATGCCATACTCTTCCCATT+TGG | + | chr5_3:64624776-64624795 | None:intergenic | 45.0% | |
| !! | GAAGTTGGTGTCCCTAAGAA+AGG | - | chr5_3:64624993-64625012 | Msa0824930:CDS | 45.0% |
| !! | TCTTCAGCATTTGGTGCAGT+TGG | - | chr5_3:64625032-64625051 | Msa0824930:CDS | 45.0% |
| GGTGCAGTTGGTCAAATTGT+TGG | - | chr5_3:64625044-64625063 | Msa0824930:CDS | 45.0% | |
| ! | GAGCAAGTTTGGGTTTGATG+AGG | - | chr5_3:64625240-64625259 | Msa0824930:CDS | 45.0% |
| !!! | CTTTAGGCCTCACTTTTTGC+TGG | - | chr5_3:64625475-64625494 | Msa0824930:intron | 45.0% |
| !! | ATAGCTAAAGGCATCGAGAG+TGG | - | chr5_3:64625956-64625975 | Msa0824930:CDS | 45.0% |
| !! | TAGCTAAAGGCATCGAGAGT+GGG | - | chr5_3:64625957-64625976 | Msa0824930:CDS | 45.0% |
| ! | ATGTTCACAGGCAAAAGTGC+TGG | - | chr5_3:64625998-64626017 | Msa0824930:CDS | 45.0% |
| ! | TGGTTTGGGGAGTCACCAAA+TGG | - | chr5_3:64624758-64624777 | Msa0824930:CDS | 50.0% |
| GGTTTGGGGAGTCACCAAAT+GGG | - | chr5_3:64624759-64624778 | Msa0824930:CDS | 50.0% | |
| CCTGCATAAGCAGTCATACC+AGG | + | chr5_3:64624966-64624985 | None:intergenic | 50.0% | |
| CCTGGTATGACTGCTTATGC+AGG | - | chr5_3:64624963-64624982 | Msa0824930:CDS | 50.0% | |
| GCGGCGTCTCATGTTAAGAA+GGG | + | chr5_3:64625738-64625757 | None:intergenic | 50.0% | |
| CTTCTTAACATGAGACGCCG+CGG | - | chr5_3:64625737-64625756 | Msa0824930:intron | 50.0% | |
| ! | TGGTTTGGGGAGTCACCAAA+TGG | - | chr5_3:64624758-64624777 | Msa0824930:CDS | 50.0% |
| GGTTTGGGGAGTCACCAAAT+GGG | - | chr5_3:64624759-64624778 | Msa0824930:CDS | 50.0% | |
| CCTGCATAAGCAGTCATACC+AGG | + | chr5_3:64624966-64624985 | None:intergenic | 50.0% | |
| CCTGGTATGACTGCTTATGC+AGG | - | chr5_3:64624963-64624982 | Msa0824930:CDS | 50.0% | |
| GCGGCGTCTCATGTTAAGAA+GGG | + | chr5_3:64625738-64625757 | None:intergenic | 50.0% | |
| CTTCTTAACATGAGACGCCG+CGG | - | chr5_3:64625737-64625756 | Msa0824930:intron | 50.0% | |
| CGCGGCGTCTCATGTTAAGA+AGG | + | chr5_3:64625739-64625758 | None:intergenic | 55.0% | |
| CGCGGCGTCTCATGTTAAGA+AGG | + | chr5_3:64625739-64625758 | None:intergenic | 55.0% | |
| !!! | GGCCTCACTTTTTGCTGGGC+CGG | - | chr5_3:64625480-64625499 | Msa0824930:intron | 60.0% |
| CAGCCACCACAATTCGACCG+CGG | + | chr5_3:64625757-64625776 | None:intergenic | 60.0% | |
| !!! | GGCCTCACTTTTTGCTGGGC+CGG | - | chr5_3:64625480-64625499 | Msa0824930:intron | 60.0% |
| CAGCCACCACAATTCGACCG+CGG | + | chr5_3:64625757-64625776 | None:intergenic | 60.0% | |
| CGCCGGCCCAGCAAAAAGTG+AGG | + | chr5_3:64625485-64625504 | None:intergenic | 65.0% | |
| GAGACGCCGCGGTCGAATTG+TGG | - | chr5_3:64625748-64625767 | Msa0824930:intron | 65.0% | |
| ACGCCGCGGTCGAATTGTGG+TGG | - | chr5_3:64625751-64625770 | Msa0824930:intron | 65.0% | |
| CGCGGTCGAATTGTGGTGGC+TGG | - | chr5_3:64625755-64625774 | Msa0824930:intron | 65.0% | |
| CGCCGGCCCAGCAAAAAGTG+AGG | + | chr5_3:64625485-64625504 | None:intergenic | 65.0% | |
| GAGACGCCGCGGTCGAATTG+TGG | - | chr5_3:64625748-64625767 | Msa0824930:intron | 65.0% | |
| ACGCCGCGGTCGAATTGTGG+TGG | - | chr5_3:64625751-64625770 | Msa0824930:intron | 65.0% | |
| CGCGGTCGAATTGTGGTGGC+TGG | - | chr5_3:64625755-64625774 | Msa0824930:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64624012 | 64626051 | 64624012 | ID=Msa0824930;Name=Msa0824930 |
| chr5_3 | mRNA | 64624012 | 64626051 | 64624012 | ID=Msa0824930-mRNA-1;Parent=Msa0824930;Name=Msa0824930-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|5|0|353 |
| chr5_3 | exon | 64625824 | 64626051 | 64625824 | ID=Msa0824930-mRNA-1:exon:20161;Parent=Msa0824930-mRNA-1 |
| chr5_3 | exon | 64625195 | 64625372 | 64625195 | ID=Msa0824930-mRNA-1:exon:20160;Parent=Msa0824930-mRNA-1 |
| chr5_3 | exon | 64624912 | 64625105 | 64624912 | ID=Msa0824930-mRNA-1:exon:20159;Parent=Msa0824930-mRNA-1 |
| chr5_3 | exon | 64624755 | 64624837 | 64624755 | ID=Msa0824930-mRNA-1:exon:20158;Parent=Msa0824930-mRNA-1 |
| chr5_3 | exon | 64624012 | 64624390 | 64624012 | ID=Msa0824930-mRNA-1:exon:20157;Parent=Msa0824930-mRNA-1 |
| chr5_3 | CDS | 64625824 | 64626051 | 64625824 | ID=Msa0824930-mRNA-1:cds;Parent=Msa0824930-mRNA-1 |
| chr5_3 | CDS | 64625195 | 64625372 | 64625195 | ID=Msa0824930-mRNA-1:cds;Parent=Msa0824930-mRNA-1 |
| chr5_3 | CDS | 64624912 | 64625105 | 64624912 | ID=Msa0824930-mRNA-1:cds;Parent=Msa0824930-mRNA-1 |
| chr5_3 | CDS | 64624755 | 64624837 | 64624755 | ID=Msa0824930-mRNA-1:cds;Parent=Msa0824930-mRNA-1 |
| chr5_3 | CDS | 64624012 | 64624390 | 64624012 | ID=Msa0824930-mRNA-1:cds;Parent=Msa0824930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
