Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743870 | XP_004497780.1 | 85.161 | 155 | 23 | 0 | 4 | 158 | 3 | 157 | 4.37e-93 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743870 | sp|Q9SLN8|DBR_TOBAC | 61.146 | 157 | 59 | 1 | 1 | 157 | 1 | 155 | 2.22e-62 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743870 | A0A1S2Y2K2 | 85.161 | 155 | 23 | 0 | 4 | 158 | 3 | 157 | 2.09e-93 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002250 | Msa0743870 | 0.830241 | 3.280683e-55 | -8.615850e-47 |
| Msa0011050 | Msa0743870 | 0.801243 | 9.868882e-49 | -8.615850e-47 |
| Msa0028620 | Msa0743870 | 0.814360 | 1.603350e-51 | -8.615850e-47 |
| Msa0032080 | Msa0743870 | 0.809767 | 1.607781e-50 | -8.615850e-47 |
| Msa0033850 | Msa0743870 | 0.802637 | 5.105405e-49 | -8.615850e-47 |
| Msa0043850 | Msa0743870 | 0.809937 | 1.478460e-50 | -8.615850e-47 |
| Msa0046560 | Msa0743870 | 0.815160 | 1.065776e-51 | -8.615850e-47 |
| Msa0048390 | Msa0743870 | 0.821688 | 3.535184e-53 | -8.615850e-47 |
| Msa0053860 | Msa0743870 | 0.810452 | 1.144801e-50 | -8.615850e-47 |
| Msa0060070 | Msa0743870 | 0.844082 | 9.420678e-59 | -8.615850e-47 |
| Msa0061220 | Msa0743870 | 0.828311 | 9.644989e-55 | -8.615850e-47 |
| Msa0061500 | Msa0743870 | 0.800002 | 1.768188e-48 | -8.615850e-47 |
| Msa0081620 | Msa0743870 | 0.811812 | 5.805041e-51 | -8.615850e-47 |
| Msa0081940 | Msa0743870 | 0.804651 | 1.949808e-49 | -8.615850e-47 |
| Msa0090510 | Msa0743870 | 0.832592 | 8.658460e-56 | -8.615850e-47 |
| Msa0092410 | Msa0743870 | 0.818403 | 1.996267e-52 | -8.615850e-47 |
| Msa0117520 | Msa0743870 | 0.816161 | 6.377581e-52 | -8.615850e-47 |
| Msa0119440 | Msa0743870 | 0.829745 | 4.334514e-55 | -8.615850e-47 |
| Msa0606080 | Msa0743870 | 0.816342 | 5.810365e-52 | -8.615850e-47 |
| Msa0613150 | Msa0743870 | 0.816964 | 4.214167e-52 | -8.615850e-47 |
| Msa0613340 | Msa0743870 | 0.809974 | 1.450940e-50 | -8.615850e-47 |
| Msa0616450 | Msa0743870 | 0.800315 | 1.526425e-48 | -8.615850e-47 |
| Msa0640940 | Msa0743870 | 0.824131 | 9.532855e-54 | -8.615850e-47 |
| Msa0641130 | Msa0743870 | 0.841942 | 3.499229e-58 | -8.615850e-47 |
| Msa0646240 | Msa0743870 | 0.805209 | 1.491098e-49 | -8.615850e-47 |
| Msa0647030 | Msa0743870 | 0.819862 | 9.291482e-53 | -8.615850e-47 |
| Msa0655920 | Msa0743870 | 0.809708 | 1.655613e-50 | -8.615850e-47 |
| Msa0679360 | Msa0743870 | 0.822754 | 2.000553e-53 | -8.615850e-47 |
| Msa0679670 | Msa0743870 | 0.804808 | 1.808257e-49 | -8.615850e-47 |
| Msa0696100 | Msa0743870 | 0.827174 | 1.810204e-54 | -8.615850e-47 |
| Msa0696850 | Msa0743870 | 0.814878 | 1.231113e-51 | -8.615850e-47 |
| Msa0703810 | Msa0743870 | 0.805932 | 1.051361e-49 | -8.615850e-47 |
| Msa0705990 | Msa0743870 | 0.803019 | 4.257497e-49 | -8.615850e-47 |
| Msa0708310 | Msa0743870 | 0.803522 | 3.349387e-49 | -8.615850e-47 |
| Msa0709120 | Msa0743870 | 0.856044 | 4.198049e-62 | -8.615850e-47 |
| Msa0711150 | Msa0743870 | 0.803533 | 3.331485e-49 | -8.615850e-47 |
| Msa0727310 | Msa0743870 | 0.821613 | 3.679592e-53 | -8.615850e-47 |
| Msa0735550 | Msa0743870 | 0.827159 | 1.824469e-54 | -8.615850e-47 |
| Msa0743870 | Msa0746170 | 0.810880 | 9.249127e-51 | -8.615850e-47 |
| Msa0743870 | Msa0746210 | 0.810312 | 1.226958e-50 | -8.615850e-47 |
| Msa0743870 | Msa0750810 | 0.821258 | 4.443639e-53 | -8.615850e-47 |
| Msa0743870 | Msa0758250 | 0.825743 | 3.967795e-54 | -8.615850e-47 |
| Msa0743870 | Msa0764920 | 0.801231 | 9.924729e-49 | -8.615850e-47 |
| Msa0743870 | Msa0772740 | 0.800809 | 1.211063e-48 | -8.615850e-47 |
| Msa0743870 | Msa0787790 | 0.871731 | 5.465117e-67 | -8.615850e-47 |
| Msa0743870 | Msa0789560 | 0.801745 | 7.788359e-49 | -8.615850e-47 |
| Msa0743870 | Msa0796630 | 0.802451 | 5.575672e-49 | -8.615850e-47 |
| Msa0743870 | Msa0812950 | 0.807389 | 5.178024e-50 | -8.615850e-47 |
| Msa0743870 | Msa0823540 | 0.842527 | 2.449667e-58 | -8.615850e-47 |
| Msa0743870 | Msa0824930 | 0.843349 | 1.479683e-58 | -8.615850e-47 |
| Msa0743870 | Msa0829650 | 0.814320 | 1.636038e-51 | -8.615850e-47 |
| Msa0743870 | Msa0831130 | 0.833813 | 4.298696e-56 | -8.615850e-47 |
| Msa0743870 | Msa0837870 | 0.813528 | 2.445182e-51 | -8.615850e-47 |
| Msa0743870 | Msa0844110 | 0.805143 | 1.539094e-49 | -8.615850e-47 |
| Msa0743870 | Msa0862620 | 0.823561 | 1.296596e-53 | -8.615850e-47 |
| Msa0743870 | Msa0863720 | 0.819362 | 1.208356e-52 | -8.615850e-47 |
| Msa0743870 | Msa0863990 | 0.874201 | 8.128825e-68 | -8.615850e-47 |
| Msa0743870 | Msa0865970 | 0.837798 | 4.202660e-57 | -8.615850e-47 |
| Msa0743870 | Msa0866070 | 0.839343 | 1.677378e-57 | -8.615850e-47 |
| Msa0743870 | Msa0867870 | 0.803068 | 4.157570e-49 | -8.615850e-47 |
| Msa0743870 | Msa0870510 | 0.805847 | 1.095477e-49 | -8.615850e-47 |
| Msa0743870 | Msa0881720 | 0.815635 | 8.355560e-52 | -8.615850e-47 |
| Msa0743870 | Msa0894710 | 0.817159 | 3.810956e-52 | -8.615850e-47 |
| Msa0743870 | Msa0902830 | 0.809529 | 1.808616e-50 | -8.615850e-47 |
| Msa0743870 | Msa0921420 | 0.816394 | 5.656325e-52 | -8.615850e-47 |
| Msa0743870 | Msa0960390 | 0.822594 | 2.178633e-53 | -8.615850e-47 |
| Msa0743870 | Msa0965290 | 0.803806 | 2.924382e-49 | -8.615850e-47 |
| Msa0743870 | Msa0994910 | 0.829560 | 4.809099e-55 | -8.615850e-47 |
| Msa0743870 | Msa0999680 | 0.804630 | 1.969809e-49 | -8.615850e-47 |
| Msa0743870 | Msa1011090 | 0.821061 | 4.932575e-53 | -8.615850e-47 |
| Msa0743870 | Msa1013070 | 0.800683 | 1.284937e-48 | -8.615850e-47 |
| Msa0743870 | Msa1030810 | 0.817185 | 3.759792e-52 | -8.615850e-47 |
| Msa0743870 | Msa1040980 | 0.827138 | 1.846160e-54 | -8.615850e-47 |
| Msa0743870 | Msa1042660 | 0.811867 | 5.647468e-51 | -8.615850e-47 |
| Msa0743870 | Msa1043120 | 0.808828 | 2.556511e-50 | -8.615850e-47 |
| Msa0743870 | Msa1062040 | 0.808053 | 3.741015e-50 | -8.615850e-47 |
| Msa0743870 | Msa1063420 | 0.809852 | 1.541609e-50 | -8.615850e-47 |
| Msa0743870 | Msa1069890 | 0.816789 | 4.613573e-52 | -8.615850e-47 |
| Msa0743870 | Msa1072900 | 0.800583 | 1.346291e-48 | -8.615850e-47 |
| Msa0743870 | Msa1074350 | 0.802082 | 6.642110e-49 | -8.615850e-47 |
| Msa0743870 | Msa1102820 | 0.800800 | 1.215762e-48 | -8.615850e-47 |
| Msa0743870 | Msa1107200 | 0.829177 | 5.955813e-55 | -8.615850e-47 |
| Msa0743870 | Msa1109810 | 0.826654 | 2.409047e-54 | -8.615850e-47 |
| Msa0743870 | Msa1127380 | 0.801695 | 7.974949e-49 | -8.615850e-47 |
| Msa0743870 | Msa1128270 | 0.804734 | 1.873488e-49 | -8.615850e-47 |
| Msa0743870 | Msa1150780 | 0.811996 | 5.292882e-51 | -8.615850e-47 |
| Msa0743870 | Msa1176200 | 0.817841 | 2.674659e-52 | -8.615850e-47 |
| Msa0743870 | Msa1177560 | 0.827087 | 1.898793e-54 | -8.615850e-47 |
| Msa0743870 | Msa1184780 | 0.837895 | 3.967492e-57 | -8.615850e-47 |
| Msa0743870 | Msa1209190 | 0.824521 | 7.715127e-54 | -8.615850e-47 |
| Msa0743870 | Msa1212050 | 0.851659 | 7.683065e-61 | -8.615850e-47 |
| Msa0743870 | Msa1212130 | 0.867521 | 1.287321e-65 | -8.615850e-47 |
| Msa0743870 | Msa1214170 | 0.846918 | 1.606009e-59 | -8.615850e-47 |
| Msa0743870 | Msa1219150 | 0.816338 | 5.822883e-52 | -8.615850e-47 |
| Msa0743870 | Msa1221330 | 0.816430 | 5.551409e-52 | -8.615850e-47 |
| Msa0743870 | Msa1229480 | 0.808643 | 2.799579e-50 | -8.615850e-47 |
| Msa0743870 | Msa1234620 | 0.861260 | 1.162313e-63 | -8.615850e-47 |
| Msa0743870 | Msa1236440 | 0.810319 | 1.222584e-50 | -8.615850e-47 |
| Msa0743870 | Msa1259860 | 0.865950 | 4.070557e-65 | -8.615850e-47 |
| Msa0743870 | Msa1260680 | 0.844579 | 6.925489e-59 | -8.615850e-47 |
| Msa0743870 | Msa1270660 | 0.809137 | 2.194975e-50 | -8.615850e-47 |
| Msa0743870 | Msa1270730 | 0.809823 | 1.563616e-50 | -8.615850e-47 |
| Msa0743870 | Msa1280150 | 0.802774 | 4.783080e-49 | -8.615850e-47 |
| Msa0743870 | Msa1280170 | 0.840754 | 7.185862e-58 | -8.615850e-47 |
| Msa0743870 | Msa1297530 | 0.808370 | 3.202270e-50 | -8.615850e-47 |
| Msa0743870 | Msa1332050 | 0.813468 | 2.520852e-51 | -8.615850e-47 |
| Msa0743870 | Msa1335230 | 0.821697 | 3.517740e-53 | -8.615850e-47 |
| Msa0743870 | Msa1336040 | 0.806766 | 7.015128e-50 | -8.615850e-47 |
| Msa0743870 | Msa1337310 | 0.822925 | 1.824671e-53 | -8.615850e-47 |
| Msa0743870 | Msa1338400 | 0.807339 | 5.305650e-50 | -8.615850e-47 |
| Msa0743870 | Msa1353890 | 0.809074 | 2.264999e-50 | -8.615850e-47 |
| Msa0743870 | Msa1360020 | 0.844663 | 6.575451e-59 | -8.615850e-47 |
| Msa0743870 | Msa1364080 | 0.801053 | 1.079468e-48 | -8.615850e-47 |
| Msa0743870 | Msa1366550 | 0.812806 | 3.521985e-51 | -8.615850e-47 |
| Msa0743870 | Msa1369920 | -0.850293 | 1.864447e-60 | -8.615850e-47 |
| Msa0743870 | Msa1370590 | 0.834975 | 2.196614e-56 | -8.615850e-47 |
| Msa0743870 | Msa1384100 | 0.837895 | 3.968938e-57 | -8.615850e-47 |
| Msa0743870 | Msa1386890 | 0.859349 | 4.399304e-63 | -8.615850e-47 |
| Msa0743870 | Msa1399260 | 0.837406 | 5.295811e-57 | -8.615850e-47 |
| Msa0743870 | Msa1400930 | 0.829793 | 4.218575e-55 | -8.615850e-47 |
| Msa0743870 | Msa1407760 | 0.829660 | 4.545216e-55 | -8.615850e-47 |
| Msa0743870 | Msa1411980 | 0.814298 | 1.654262e-51 | -8.615850e-47 |
| Msa0743870 | Msa1419840 | 0.804247 | 2.367571e-49 | -8.615850e-47 |
| Msa0743870 | Msa1424630 | 0.827969 | 1.166023e-54 | -8.615850e-47 |
| Msa0743870 | Msa1428780 | 0.800742 | 1.249382e-48 | -8.615850e-47 |
| Msa0743870 | Msa1430130 | 0.826507 | 2.611355e-54 | -8.615850e-47 |
| Msa0743870 | Msa1430550 | 0.811582 | 6.513964e-51 | -8.615850e-47 |
| Msa0743870 | Msa1434040 | 0.839505 | 1.521843e-57 | -8.615850e-47 |
| Msa0743870 | Msa1437730 | 0.833720 | 4.533865e-56 | -8.615850e-47 |
| Msa0743870 | Msa1442920 | 0.803536 | 3.326939e-49 | -8.615850e-47 |
| Msa0743870 | Msa1444120 | 0.844198 | 8.771048e-59 | -8.615850e-47 |
| Msa0743870 | Msa1456230 | 0.828294 | 9.740885e-55 | -8.615850e-47 |
| Msa0743870 | Msa1458340 | 0.805963 | 1.035653e-49 | -8.615850e-47 |
| Msa0743870 | Msa1460750 | 0.824852 | 6.447176e-54 | -8.615850e-47 |
| Msa0743870 | Msa1463030 | 0.823193 | 1.580445e-53 | -8.615850e-47 |
| Msa0743870 | Msa1465210 | 0.817819 | 2.706222e-52 | -8.615850e-47 |
| Msa0124320 | Msa0743870 | 0.825413 | 4.752426e-54 | -8.615850e-47 |
| Msa0128430 | Msa0743870 | 0.806032 | 1.001798e-49 | -8.615850e-47 |
| Msa0130720 | Msa0743870 | 0.817630 | 2.985440e-52 | -8.615850e-47 |
| Msa0130850 | Msa0743870 | 0.822290 | 2.564500e-53 | -8.615850e-47 |
| Msa0136630 | Msa0743870 | 0.858729 | 6.746701e-63 | -8.615850e-47 |
| Msa0138900 | Msa0743870 | 0.819466 | 1.144693e-52 | -8.615850e-47 |
| Msa0139670 | Msa0743870 | 0.855956 | 4.455156e-62 | -8.615850e-47 |
| Msa0152560 | Msa0743870 | 0.825348 | 4.924042e-54 | -8.615850e-47 |
| Msa0160960 | Msa0743870 | 0.849165 | 3.851459e-60 | -8.615850e-47 |
| Msa0162690 | Msa0743870 | 0.812393 | 4.336295e-51 | -8.615850e-47 |
| Msa0173960 | Msa0743870 | 0.810491 | 1.122477e-50 | -8.615850e-47 |
| Msa0176260 | Msa0743870 | 0.835110 | 2.030306e-56 | -8.615850e-47 |
| Msa0176750 | Msa0743870 | 0.812645 | 3.819220e-51 | -8.615850e-47 |
| Msa0183910 | Msa0743870 | 0.822476 | 2.321387e-53 | -8.615850e-47 |
| Msa0187310 | Msa0743870 | 0.816376 | 5.709689e-52 | -8.615850e-47 |
| Msa0187830 | Msa0743870 | 0.819438 | 1.161683e-52 | -8.615850e-47 |
| Msa0194010 | Msa0743870 | 0.808139 | 3.586135e-50 | -8.615850e-47 |
| Msa0198300 | Msa0743870 | 0.810589 | 1.069054e-50 | -8.615850e-47 |
| Msa0202800 | Msa0743870 | 0.806688 | 7.283195e-50 | -8.615850e-47 |
| Msa0213430 | Msa0743870 | 0.840937 | 6.436199e-58 | -8.615850e-47 |
| Msa0220750 | Msa0743870 | 0.800452 | 1.431893e-48 | -8.615850e-47 |
| Msa0224130 | Msa0743870 | 0.809799 | 1.582999e-50 | -8.615850e-47 |
| Msa0234090 | Msa0743870 | 0.807811 | 4.211891e-50 | -8.615850e-47 |
| Msa0235880 | Msa0743870 | 0.822259 | 2.606941e-53 | -8.615850e-47 |
| Msa0364790 | Msa0743870 | 0.811255 | 7.672765e-51 | -8.615850e-47 |
| Msa0380600 | Msa0743870 | 0.864558 | 1.115395e-64 | -8.615850e-47 |
| Msa0382370 | Msa0743870 | 0.846732 | 1.805152e-59 | -8.615850e-47 |
| Msa0388730 | Msa0743870 | 0.813645 | 2.304488e-51 | -8.615850e-47 |
| Msa0389210 | Msa0743870 | 0.808753 | 2.652697e-50 | -8.615850e-47 |
| Msa0390530 | Msa0743870 | 0.806385 | 8.442229e-50 | -8.615850e-47 |
| Msa0393430 | Msa0743870 | 0.803830 | 2.890759e-49 | -8.615850e-47 |
| Msa0394120 | Msa0743870 | 0.807195 | 5.690431e-50 | -8.615850e-47 |
| Msa0395980 | Msa0743870 | 0.802508 | 5.427239e-49 | -8.615850e-47 |
| Msa0403490 | Msa0743870 | 0.814446 | 1.534460e-51 | -8.615850e-47 |
| Msa0403770 | Msa0743870 | 0.817676 | 2.914038e-52 | -8.615850e-47 |
| Msa0427580 | Msa0743870 | 0.821524 | 3.856551e-53 | -8.615850e-47 |
| Msa0430240 | Msa0743870 | 0.864576 | 1.100793e-64 | -8.615850e-47 |
| Msa0432160 | Msa0743870 | 0.847775 | 9.343835e-60 | -8.615850e-47 |
| Msa0432670 | Msa0743870 | 0.807318 | 5.360273e-50 | -8.615850e-47 |
| Msa0472770 | Msa0743870 | 0.801165 | 1.023899e-48 | -8.615850e-47 |
| Msa0476680 | Msa0743870 | 0.851172 | 1.055397e-60 | -8.615850e-47 |
| Msa0240270 | Msa0743870 | 0.831827 | 1.338275e-55 | -8.615850e-47 |
| Msa0265270 | Msa0743870 | 0.803888 | 2.811439e-49 | -8.615850e-47 |
| Msa0269560 | Msa0743870 | 0.813063 | 3.093878e-51 | -8.615850e-47 |
| Msa0302730 | Msa0743870 | 0.809802 | 1.580047e-50 | -8.615850e-47 |
| Msa0314000 | Msa0743870 | 0.806829 | 6.800954e-50 | -8.615850e-47 |
| Msa0319290 | Msa0743870 | 0.815731 | 7.953526e-52 | -8.615850e-47 |
| Msa0347750 | Msa0743870 | 0.810314 | 1.225763e-50 | -8.615850e-47 |
| Msa0482940 | Msa0743870 | 0.841154 | 5.644795e-58 | -8.615850e-47 |
| Msa0484800 | Msa0743870 | 0.808259 | 3.381515e-50 | -8.615850e-47 |
| Msa0491000 | Msa0743870 | 0.803154 | 3.992393e-49 | -8.615850e-47 |
| Msa0500400 | Msa0743870 | 0.839335 | 1.684781e-57 | -8.615850e-47 |
| Msa0516240 | Msa0743870 | 0.807877 | 4.077559e-50 | -8.615850e-47 |
| Msa0518170 | Msa0743870 | 0.827836 | 1.255383e-54 | -8.615850e-47 |
| Msa0519160 | Msa0743870 | 0.822526 | 2.259300e-53 | -8.615850e-47 |
| Msa0521010 | Msa0743870 | 0.849232 | 3.690324e-60 | -8.615850e-47 |
| Msa0526070 | Msa0743870 | -0.801615 | 8.281903e-49 | -8.615850e-47 |
| Msa0545050 | Msa0743870 | 0.840578 | 7.993547e-58 | -8.615850e-47 |
| Msa0558390 | Msa0743870 | 0.814247 | 1.697519e-51 | -8.615850e-47 |
| Msa0566350 | Msa0743870 | 0.811421 | 7.061837e-51 | -8.615850e-47 |
| Msa0566750 | Msa0743870 | 0.818015 | 2.442949e-52 | -8.615850e-47 |
| Msa0573890 | Msa0743870 | 0.814619 | 1.405207e-51 | -8.615850e-47 |
| Msa0581400 | Msa0743870 | 0.820865 | 5.470818e-53 | -8.615850e-47 |
| Msa0583670 | Msa0743870 | 0.804016 | 2.644353e-49 | -8.615850e-47 |
| Msa0584580 | Msa0743870 | 0.804419 | 2.179825e-49 | -8.615850e-47 |
| Msa0584600 | Msa0743870 | 0.809329 | 1.996585e-50 | -8.615850e-47 |
| Msa0600450 | Msa0743870 | 0.807847 | 4.138022e-50 | -8.615850e-47 |
| Msa0600590 | Msa0743870 | 0.838318 | 3.087972e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743870 | MtrunA17_Chr8g0335881 | 58.442 | 154 | 63 | 1 | 4 | 157 | 3 | 155 | 1.55e-59 | 184 |
| Msa0743870 | MtrunA17_Chr8g0337361 | 58.442 | 154 | 63 | 1 | 4 | 157 | 62 | 214 | 1.50e-57 | 184 |
| Msa0743870 | MtrunA17_Chr8g0337451 | 56.410 | 156 | 64 | 2 | 4 | 157 | 3 | 156 | 1.52e-57 | 182 |
| Msa0743870 | MtrunA17_Chr8g0337471 | 57.419 | 155 | 64 | 2 | 4 | 157 | 3 | 156 | 2.15e-57 | 182 |
| Msa0743870 | MtrunA17_Chr4g0043061 | 56.688 | 157 | 64 | 2 | 3 | 157 | 8 | 162 | 6.91e-57 | 181 |
| Msa0743870 | MtrunA17_Chr8g0337491 | 54.819 | 166 | 62 | 3 | 4 | 157 | 3 | 167 | 5.96e-56 | 181 |
| Msa0743870 | MtrunA17_Chr8g0337491 | 54.717 | 53 | 23 | 1 | 4 | 56 | 369 | 420 | 8.54e-11 | 58.9 |
| Msa0743870 | MtrunA17_Chr8g0337371 | 55.844 | 154 | 66 | 2 | 4 | 157 | 498 | 649 | 8.76e-53 | 179 |
| Msa0743870 | MtrunA17_Chr8g0337371 | 54.305 | 151 | 67 | 2 | 7 | 157 | 54 | 202 | 3.43e-50 | 171 |
| Msa0743870 | MtrunA17_Chr7g0214831 | 55.128 | 156 | 68 | 2 | 4 | 158 | 5 | 159 | 3.52e-50 | 164 |
| Msa0743870 | MtrunA17_Chr8g0337481 | 66.279 | 86 | 29 | 0 | 72 | 157 | 12 | 97 | 7.06e-38 | 130 |
| Msa0743870 | MtrunA17_Chr5g0445911 | 98.113 | 53 | 0 | 1 | 25 | 77 | 1 | 52 | 4.26e-30 | 104 |
| Msa0743870 | MtrunA17_Chr2g0307121 | 35.849 | 159 | 95 | 4 | 4 | 157 | 2 | 158 | 1.80e-26 | 102 |
| Msa0743870 | MtrunA17_Chr2g0322531 | 33.544 | 158 | 100 | 5 | 1 | 154 | 1 | 157 | 1.59e-15 | 72.4 |
| Msa0743870 | MtrunA17_Chr2g0322551 | 32.716 | 162 | 101 | 6 | 1 | 156 | 1 | 160 | 5.67e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0743870 | AT1G26320.2 | 59.236 | 157 | 58 | 3 | 5 | 157 | 9 | 163 | 8.99e-57 | 181 |
| Msa0743870 | AT1G26320.1 | 59.236 | 157 | 58 | 3 | 5 | 157 | 9 | 163 | 9.07e-57 | 181 |
| Msa0743870 | AT5G17000.2 | 56.051 | 157 | 59 | 4 | 7 | 157 | 5 | 157 | 1.49e-56 | 177 |
| Msa0743870 | AT5G16990.1 | 56.410 | 156 | 59 | 4 | 7 | 157 | 4 | 155 | 3.38e-56 | 179 |
| Msa0743870 | AT3G03080.1 | 57.692 | 156 | 61 | 2 | 5 | 157 | 9 | 162 | 1.81e-55 | 178 |
| Msa0743870 | AT5G17000.1 | 56.051 | 157 | 59 | 4 | 7 | 157 | 5 | 157 | 2.57e-55 | 177 |
| Msa0743870 | AT5G16970.1 | 55.414 | 157 | 60 | 4 | 7 | 157 | 5 | 157 | 2.59e-55 | 177 |
| Msa0743870 | AT5G37940.1 | 54.430 | 158 | 61 | 4 | 7 | 157 | 12 | 165 | 1.92e-53 | 172 |
| Msa0743870 | AT5G38000.1 | 52.532 | 158 | 64 | 4 | 7 | 157 | 12 | 165 | 2.60e-51 | 167 |
| Msa0743870 | AT5G38000.3 | 52.532 | 158 | 64 | 4 | 7 | 157 | 12 | 165 | 3.04e-51 | 167 |
| Msa0743870 | AT5G16960.2 | 53.846 | 156 | 66 | 3 | 6 | 157 | 5 | 158 | 1.28e-50 | 165 |
| Msa0743870 | AT5G16960.1 | 53.846 | 156 | 66 | 3 | 6 | 157 | 5 | 158 | 1.28e-50 | 165 |
| Msa0743870 | AT5G37980.1 | 50.641 | 156 | 70 | 3 | 7 | 157 | 12 | 165 | 2.35e-49 | 162 |
| Msa0743870 | AT3G59845.1 | 46.584 | 161 | 81 | 3 | 1 | 157 | 1 | 160 | 2.29e-43 | 146 |
| Msa0743870 | AT1G65560.1 | 48.171 | 164 | 75 | 5 | 1 | 157 | 1 | 161 | 3.53e-42 | 144 |
| Msa0743870 | AT5G38000.2 | 50.725 | 138 | 57 | 4 | 7 | 137 | 12 | 145 | 4.07e-40 | 138 |
| Msa0743870 | AT1G65560.2 | 51.807 | 83 | 35 | 2 | 79 | 157 | 4 | 85 | 2.69e-22 | 90.1 |
| Msa0743870 | AT5G16980.2 | 33.113 | 151 | 62 | 3 | 7 | 157 | 6 | 117 | 1.71e-18 | 80.5 |
| Msa0743870 | AT3G59845.2 | 55.932 | 59 | 24 | 2 | 100 | 157 | 1 | 58 | 2.24e-16 | 73.9 |
| Msa0743870 | AT5G16980.1 | 73.810 | 42 | 11 | 0 | 116 | 157 | 10 | 51 | 6.72e-15 | 69.7 |
| Msa0743870 | AT5G16980.3 | 73.810 | 42 | 11 | 0 | 116 | 157 | 10 | 51 | 6.72e-15 | 69.7 |
Find 31 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACATAATCTCCTTTCTT+AGG | 0.186749 | 5_1:-64336879 | None:intergenic |
| TCTCAGCCAATTGTTGGATA+TGG | 0.212277 | 5_1:+64336559 | Msa0743870:intron |
| AAATACATGTCTGTTTGTTT+TGG | 0.259959 | 5_1:-64335739 | None:intergenic |
| GTACCTCTTTCCTATTATAC+TGG | 0.275241 | 5_1:+64336712 | Msa0743870:CDS |
| GCTTCTTCTGAAGCATCTTT+AGG | 0.302866 | 5_1:-64335790 | None:intergenic |
| ACCAAGTAATCCAGTATAAT+AGG | 0.317896 | 5_1:-64336722 | None:intergenic |
| TTTAGGAAGTTGTAAACTAA+TGG | 0.368693 | 5_1:-64335773 | None:intergenic |
| CATTGTGTACTTACTGAATC+TGG | 0.374679 | 5_1:-64335904 | None:intergenic |
| TCCTATTATACTGGATTACT+TGG | 0.387026 | 5_1:+64336721 | Msa0743870:CDS |
| TGTTTCTCTCAGCCAATTGT+TGG | 0.398931 | 5_1:+64336553 | Msa0743870:intron |
| CATACTCCATATCCAACAAT+TGG | 0.417973 | 5_1:-64336565 | None:intergenic |
| CTAGCTTCAGACTACATAAC+TGG | 0.420922 | 5_1:+64335712 | Msa0743870:CDS |
| AGACATAATCTCCTTTCTTA+GGG | 0.438933 | 5_1:-64336878 | None:intergenic |
| GATGCTGTACTCTTCCCATT+TGG | 0.449214 | 5_1:-64336647 | None:intergenic |
| TTTGATGAGGCTATCAGTCT+TGG | 0.465767 | 5_1:-64336674 | None:intergenic |
| TGGTTTGGGGAGTCACCAAA+TGG | 0.470534 | 5_1:+64336632 | Msa0743870:CDS |
| ATTATATATGTAGGTATGCC+TGG | 0.474482 | 5_1:+64336819 | Msa0743870:intron |
| ACTTACTGAATCTGGAGAAA+AGG | 0.479229 | 5_1:-64335896 | None:intergenic |
| CCTGGTATGACTGCTTATGC+AGG | 0.485648 | 5_1:+64336837 | Msa0743870:CDS |
| ATGAGAGGAACCAAAAGAAC+AGG | 0.495779 | 5_1:+64335853 | Msa0743870:CDS |
| AGAACAAGTGATCAACAAAC+AGG | 0.499152 | 5_1:+64335687 | Msa0743870:CDS |
| GAAGTTGGTGTCCCTAAGAA+AGG | 0.513037 | 5_1:+64336867 | Msa0743870:CDS |
| TATGCAGGTTTCTATGAAGT+TGG | 0.517868 | 5_1:+64336852 | Msa0743870:CDS |
| TGCTTCAGAAGAAGCTGTGT+TGG | 0.523213 | 5_1:+64335798 | Msa0743870:CDS |
| CCTGCATAAGCAGTCATACC+AGG | 0.538967 | 5_1:-64336837 | None:intergenic |
| AAGTTGTAAACTAATGGTAG+AGG | 0.558112 | 5_1:-64335767 | None:intergenic |
| AATCCAGTATAATAGGAAAG+AGG | 0.565113 | 5_1:-64336715 | None:intergenic |
| TCTTGTGATCCTTACATGAG+AGG | 0.570442 | 5_1:+64335838 | Msa0743870:CDS |
| ATATGGAGTATGCAAAGTGT+TGG | 0.578801 | 5_1:+64336576 | Msa0743870:CDS |
| CTGGAGAAAAGGAATAAAAG+AGG | 0.580653 | 5_1:-64335885 | None:intergenic |
| GGTTTGGGGAGTCACCAAAT+GGG | 0.589430 | 5_1:+64336633 | Msa0743870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTAATTTAAATGTATACT+TGG | - | chr5_1:64336062-64336081 | None:intergenic | 15.0% |
| !! | AGTATACATTTAAATTAAAG+AGG | + | chr5_1:64336062-64336081 | Msa0743870:intron | 15.0% |
| !!! | ACTTTTTTCTTTGTAAAATA+TGG | - | chr5_1:64336131-64336150 | None:intergenic | 15.0% |
| !!! | ATATTTTACAAAGAAAAAAG+TGG | + | chr5_1:64336130-64336149 | Msa0743870:intron | 15.0% |
| !! | ATATGATTAAGTCTATTATA+AGG | + | chr5_1:64336480-64336499 | Msa0743870:intron | 15.0% |
| !! | TAATGAGTTATTATATATGT+AGG | + | chr5_1:64336810-64336829 | Msa0743870:intron | 15.0% |
| !!! | CTTTAATTTAAATGTATACT+TGG | - | chr5_1:64336062-64336081 | None:intergenic | 15.0% |
| !! | AGTATACATTTAAATTAAAG+AGG | + | chr5_1:64336062-64336081 | Msa0743870:intron | 15.0% |
| !!! | ACTTTTTTCTTTGTAAAATA+TGG | - | chr5_1:64336131-64336150 | None:intergenic | 15.0% |
| !!! | ATATTTTACAAAGAAAAAAG+TGG | + | chr5_1:64336130-64336149 | Msa0743870:intron | 15.0% |
| !! | ATATGATTAAGTCTATTATA+AGG | + | chr5_1:64336480-64336499 | Msa0743870:intron | 15.0% |
| !! | TAATGAGTTATTATATATGT+AGG | + | chr5_1:64336810-64336829 | Msa0743870:intron | 15.0% |
| !! | AAACATCCAAATTTCAAAAA+AGG | + | chr5_1:64336604-64336623 | Msa0743870:CDS | 20.0% |
| !! | AAACATCCAAATTTCAAAAA+AGG | + | chr5_1:64336604-64336623 | Msa0743870:CDS | 20.0% |
| !! | AAATACATGTCTGTTTGTTT+TGG | - | chr5_1:64335742-64335761 | None:intergenic | 25.0% |
| ! | TTTAGGAAGTTGTAAACTAA+TGG | - | chr5_1:64335776-64335795 | None:intergenic | 25.0% |
| !! | TTTTGGATATGATAAAACCA+CGG | - | chr5_1:64336012-64336031 | None:intergenic | 25.0% |
| !! | TGTTATTTGAACAACCAATT+TGG | + | chr5_1:64336087-64336106 | Msa0743870:intron | 25.0% |
| ! | TACAAAGAAAAAAGTGGTAT+TGG | + | chr5_1:64336136-64336155 | Msa0743870:intron | 25.0% |
| ! | ATTCAAATCGGTTGTAAAAA+TGG | - | chr5_1:64336320-64336339 | None:intergenic | 25.0% |
| ! | TTGAGCGATAAAATTCAAAT+CGG | - | chr5_1:64336332-64336351 | None:intergenic | 25.0% |
| !!! | AAGTCTCCTTTTTTGAAATT+TGG | - | chr5_1:64336613-64336632 | None:intergenic | 25.0% |
| ! | AAATTTCAAAAAAGGAGACT+TGG | + | chr5_1:64336612-64336631 | Msa0743870:CDS | 25.0% |
| !! | AAATACATGTCTGTTTGTTT+TGG | - | chr5_1:64335742-64335761 | None:intergenic | 25.0% |
| ! | TTTAGGAAGTTGTAAACTAA+TGG | - | chr5_1:64335776-64335795 | None:intergenic | 25.0% |
| !! | TTTTGGATATGATAAAACCA+CGG | - | chr5_1:64336012-64336031 | None:intergenic | 25.0% |
| !! | TGTTATTTGAACAACCAATT+TGG | + | chr5_1:64336087-64336106 | Msa0743870:intron | 25.0% |
| ! | TACAAAGAAAAAAGTGGTAT+TGG | + | chr5_1:64336136-64336155 | Msa0743870:intron | 25.0% |
| ! | ATTCAAATCGGTTGTAAAAA+TGG | - | chr5_1:64336320-64336339 | None:intergenic | 25.0% |
| ! | TTGAGCGATAAAATTCAAAT+CGG | - | chr5_1:64336332-64336351 | None:intergenic | 25.0% |
| !!! | AAGTCTCCTTTTTTGAAATT+TGG | - | chr5_1:64336613-64336632 | None:intergenic | 25.0% |
| ! | AAATTTCAAAAAAGGAGACT+TGG | + | chr5_1:64336612-64336631 | Msa0743870:CDS | 25.0% |
| AAGTTGTAAACTAATGGTAG+AGG | - | chr5_1:64335770-64335789 | None:intergenic | 30.0% | |
| !!! | GTTATTTTTGCCTGTTCTTT+TGG | - | chr5_1:64335866-64335885 | None:intergenic | 30.0% |
| CAAATAAGTTGTCACCAAAT+TGG | - | chr5_1:64336104-64336123 | None:intergenic | 30.0% | |
| ACTTTATCTCTCTATTGCTA+TGG | - | chr5_1:64336170-64336189 | None:intergenic | 30.0% | |
| ! | GATTTGAATTTTATCGCTCA+AGG | + | chr5_1:64336331-64336350 | Msa0743870:intron | 30.0% |
| ACGAATTATGTTGGAACTAA+GGG | + | chr5_1:64336439-64336458 | Msa0743870:intron | 30.0% | |
| TATGTGATTATCTCTTCTAG+AGG | + | chr5_1:64336509-64336528 | Msa0743870:intron | 30.0% | |
| AATCCAGTATAATAGGAAAG+AGG | - | chr5_1:64336718-64336737 | None:intergenic | 30.0% | |
| TCCTATTATACTGGATTACT+TGG | + | chr5_1:64336721-64336740 | Msa0743870:CDS | 30.0% | |
| ACCAAGTAATCCAGTATAAT+AGG | - | chr5_1:64336725-64336744 | None:intergenic | 30.0% | |
| ATTATATATGTAGGTATGCC+TGG | + | chr5_1:64336819-64336838 | Msa0743870:intron | 30.0% | |
| AAGTTGTAAACTAATGGTAG+AGG | - | chr5_1:64335770-64335789 | None:intergenic | 30.0% | |
| !!! | GTTATTTTTGCCTGTTCTTT+TGG | - | chr5_1:64335866-64335885 | None:intergenic | 30.0% |
| CAAATAAGTTGTCACCAAAT+TGG | - | chr5_1:64336104-64336123 | None:intergenic | 30.0% | |
| ACTTTATCTCTCTATTGCTA+TGG | - | chr5_1:64336170-64336189 | None:intergenic | 30.0% | |
| ! | GATTTGAATTTTATCGCTCA+AGG | + | chr5_1:64336331-64336350 | Msa0743870:intron | 30.0% |
| ACGAATTATGTTGGAACTAA+GGG | + | chr5_1:64336439-64336458 | Msa0743870:intron | 30.0% | |
| TATGTGATTATCTCTTCTAG+AGG | + | chr5_1:64336509-64336528 | Msa0743870:intron | 30.0% | |
| AATCCAGTATAATAGGAAAG+AGG | - | chr5_1:64336718-64336737 | None:intergenic | 30.0% | |
| TCCTATTATACTGGATTACT+TGG | + | chr5_1:64336721-64336740 | Msa0743870:CDS | 30.0% | |
| ACCAAGTAATCCAGTATAAT+AGG | - | chr5_1:64336725-64336744 | None:intergenic | 30.0% | |
| ATTATATATGTAGGTATGCC+TGG | + | chr5_1:64336819-64336838 | Msa0743870:intron | 30.0% | |
| AGAACAAGTGATCAACAAAC+AGG | + | chr5_1:64335687-64335706 | Msa0743870:CDS | 35.0% | |
| CTGGAGAAAAGGAATAAAAG+AGG | - | chr5_1:64335888-64335907 | None:intergenic | 35.0% | |
| ACTTACTGAATCTGGAGAAA+AGG | - | chr5_1:64335899-64335918 | None:intergenic | 35.0% | |
| CATTGTGTACTTACTGAATC+TGG | - | chr5_1:64335907-64335926 | None:intergenic | 35.0% | |
| TGATAAAACCACGGCTAATT+TGG | - | chr5_1:64336003-64336022 | None:intergenic | 35.0% | |
| ! | GAACTTCGCAACACTTATTT+TGG | - | chr5_1:64336029-64336048 | None:intergenic | 35.0% |
| !! | AGAAAAAAGTGGTATTGGCA+CGG | + | chr5_1:64336141-64336160 | Msa0743870:intron | 35.0% |
| GACGAATTATGTTGGAACTA+AGG | + | chr5_1:64336438-64336457 | Msa0743870:intron | 35.0% | |
| CATACTCCATATCCAACAAT+TGG | - | chr5_1:64336568-64336587 | None:intergenic | 35.0% | |
| ATATGGAGTATGCAAAGTGT+TGG | + | chr5_1:64336576-64336595 | Msa0743870:CDS | 35.0% | |
| ! | TCAAAAAAGGAGACTTGGTT+TGG | + | chr5_1:64336617-64336636 | Msa0743870:CDS | 35.0% |
| ! | CAAAAAAGGAGACTTGGTTT+GGG | + | chr5_1:64336618-64336637 | Msa0743870:CDS | 35.0% |
| ! | AAAAAAGGAGACTTGGTTTG+GGG | + | chr5_1:64336619-64336638 | Msa0743870:CDS | 35.0% |
| GTACCTCTTTCCTATTATAC+TGG | + | chr5_1:64336712-64336731 | Msa0743870:CDS | 35.0% | |
| TATGCAGGTTTCTATGAAGT+TGG | + | chr5_1:64336852-64336871 | Msa0743870:CDS | 35.0% | |
| AGAACAAGTGATCAACAAAC+AGG | + | chr5_1:64335687-64335706 | Msa0743870:CDS | 35.0% | |
| CTGGAGAAAAGGAATAAAAG+AGG | - | chr5_1:64335888-64335907 | None:intergenic | 35.0% | |
| ACTTACTGAATCTGGAGAAA+AGG | - | chr5_1:64335899-64335918 | None:intergenic | 35.0% | |
| CATTGTGTACTTACTGAATC+TGG | - | chr5_1:64335907-64335926 | None:intergenic | 35.0% | |
| TGATAAAACCACGGCTAATT+TGG | - | chr5_1:64336003-64336022 | None:intergenic | 35.0% | |
| ! | GAACTTCGCAACACTTATTT+TGG | - | chr5_1:64336029-64336048 | None:intergenic | 35.0% |
| !! | AGAAAAAAGTGGTATTGGCA+CGG | + | chr5_1:64336141-64336160 | Msa0743870:intron | 35.0% |
| GACGAATTATGTTGGAACTA+AGG | + | chr5_1:64336438-64336457 | Msa0743870:intron | 35.0% | |
| CATACTCCATATCCAACAAT+TGG | - | chr5_1:64336568-64336587 | None:intergenic | 35.0% | |
| ATATGGAGTATGCAAAGTGT+TGG | + | chr5_1:64336576-64336595 | Msa0743870:CDS | 35.0% | |
| ! | TCAAAAAAGGAGACTTGGTT+TGG | + | chr5_1:64336617-64336636 | Msa0743870:CDS | 35.0% |
| ! | CAAAAAAGGAGACTTGGTTT+GGG | + | chr5_1:64336618-64336637 | Msa0743870:CDS | 35.0% |
| ! | AAAAAAGGAGACTTGGTTTG+GGG | + | chr5_1:64336619-64336638 | Msa0743870:CDS | 35.0% |
| GTACCTCTTTCCTATTATAC+TGG | + | chr5_1:64336712-64336731 | Msa0743870:CDS | 35.0% | |
| TATGCAGGTTTCTATGAAGT+TGG | + | chr5_1:64336852-64336871 | Msa0743870:CDS | 35.0% | |
| CTAGCTTCAGACTACATAAC+TGG | + | chr5_1:64335712-64335731 | Msa0743870:CDS | 40.0% | |
| !! | GCTTCTTCTGAAGCATCTTT+AGG | - | chr5_1:64335793-64335812 | None:intergenic | 40.0% |
| TCTTGTGATCCTTACATGAG+AGG | + | chr5_1:64335838-64335857 | Msa0743870:CDS | 40.0% | |
| !!! | CTTTTGGTTCCTCTCATGTA+AGG | - | chr5_1:64335850-64335869 | None:intergenic | 40.0% |
| ATGAGAGGAACCAAAAGAAC+AGG | + | chr5_1:64335853-64335872 | Msa0743870:CDS | 40.0% | |
| AAACCACGGCTAATTTGGAA+CGG | - | chr5_1:64335998-64336017 | None:intergenic | 40.0% | |
| AGTTAAACTGTAACACCTCG+TGG | + | chr5_1:64336360-64336379 | Msa0743870:intron | 40.0% | |
| TTAAGAATGTTGTGTCCACG+AGG | - | chr5_1:64336378-64336397 | None:intergenic | 40.0% | |
| TTCATCTGTGCGAAAAGCTT+AGG | + | chr5_1:64336413-64336432 | Msa0743870:intron | 40.0% | |
| CTTAGGACGACGAATTATGT+TGG | + | chr5_1:64336430-64336449 | Msa0743870:intron | 40.0% | |
| TGTTTCTCTCAGCCAATTGT+TGG | + | chr5_1:64336553-64336572 | Msa0743870:intron | 40.0% | |
| TCTCAGCCAATTGTTGGATA+TGG | + | chr5_1:64336559-64336578 | Msa0743870:intron | 40.0% | |
| TTTGATGAGGCTATCAGTCT+TGG | - | chr5_1:64336677-64336696 | None:intergenic | 40.0% | |
| !! | CAGCATGCTCAATTTTGATG+AGG | - | chr5_1:64336690-64336709 | None:intergenic | 40.0% |
| CTAGCTTCAGACTACATAAC+TGG | + | chr5_1:64335712-64335731 | Msa0743870:CDS | 40.0% | |
| !! | GCTTCTTCTGAAGCATCTTT+AGG | - | chr5_1:64335793-64335812 | None:intergenic | 40.0% |
| TCTTGTGATCCTTACATGAG+AGG | + | chr5_1:64335838-64335857 | Msa0743870:CDS | 40.0% | |
| !!! | CTTTTGGTTCCTCTCATGTA+AGG | - | chr5_1:64335850-64335869 | None:intergenic | 40.0% |
| ATGAGAGGAACCAAAAGAAC+AGG | + | chr5_1:64335853-64335872 | Msa0743870:CDS | 40.0% | |
| AAACCACGGCTAATTTGGAA+CGG | - | chr5_1:64335998-64336017 | None:intergenic | 40.0% | |
| AGTTAAACTGTAACACCTCG+TGG | + | chr5_1:64336360-64336379 | Msa0743870:intron | 40.0% | |
| TTAAGAATGTTGTGTCCACG+AGG | - | chr5_1:64336378-64336397 | None:intergenic | 40.0% | |
| TTCATCTGTGCGAAAAGCTT+AGG | + | chr5_1:64336413-64336432 | Msa0743870:intron | 40.0% | |
| CTTAGGACGACGAATTATGT+TGG | + | chr5_1:64336430-64336449 | Msa0743870:intron | 40.0% | |
| TGTTTCTCTCAGCCAATTGT+TGG | + | chr5_1:64336553-64336572 | Msa0743870:intron | 40.0% | |
| TCTCAGCCAATTGTTGGATA+TGG | + | chr5_1:64336559-64336578 | Msa0743870:intron | 40.0% | |
| TTTGATGAGGCTATCAGTCT+TGG | - | chr5_1:64336677-64336696 | None:intergenic | 40.0% | |
| !! | CAGCATGCTCAATTTTGATG+AGG | - | chr5_1:64336690-64336709 | None:intergenic | 40.0% |
| TGCTTCAGAAGAAGCTGTGT+TGG | + | chr5_1:64335798-64335817 | Msa0743870:CDS | 45.0% | |
| ! | ACGGCTAATTTGGAACGGAT+GGG | - | chr5_1:64335993-64336012 | None:intergenic | 45.0% |
| GATGCTGTACTCTTCCCATT+TGG | - | chr5_1:64336650-64336669 | None:intergenic | 45.0% | |
| !! | GAAGTTGGTGTCCCTAAGAA+AGG | + | chr5_1:64336867-64336886 | Msa0743870:CDS | 45.0% |
| TGCTTCAGAAGAAGCTGTGT+TGG | + | chr5_1:64335798-64335817 | Msa0743870:CDS | 45.0% | |
| ! | ACGGCTAATTTGGAACGGAT+GGG | - | chr5_1:64335993-64336012 | None:intergenic | 45.0% |
| GATGCTGTACTCTTCCCATT+TGG | - | chr5_1:64336650-64336669 | None:intergenic | 45.0% | |
| !! | GAAGTTGGTGTCCCTAAGAA+AGG | + | chr5_1:64336867-64336886 | Msa0743870:CDS | 45.0% |
| ! | GGCTAATTTGGAACGGATGG+GGG | - | chr5_1:64335991-64336010 | None:intergenic | 50.0% |
| ! | CGGCTAATTTGGAACGGATG+GGG | - | chr5_1:64335992-64336011 | None:intergenic | 50.0% |
| ! | CACGGCTAATTTGGAACGGA+TGG | - | chr5_1:64335994-64336013 | None:intergenic | 50.0% |
| CATCCGTTCCAAATTAGCCG+TGG | + | chr5_1:64335992-64336011 | Msa0743870:intron | 50.0% | |
| ! | TGGTTTGGGGAGTCACCAAA+TGG | + | chr5_1:64336632-64336651 | Msa0743870:CDS | 50.0% |
| GGTTTGGGGAGTCACCAAAT+GGG | + | chr5_1:64336633-64336652 | Msa0743870:CDS | 50.0% | |
| CCTGCATAAGCAGTCATACC+AGG | - | chr5_1:64336840-64336859 | None:intergenic | 50.0% | |
| CCTGGTATGACTGCTTATGC+AGG | + | chr5_1:64336837-64336856 | Msa0743870:CDS | 50.0% | |
| ! | GGCTAATTTGGAACGGATGG+GGG | - | chr5_1:64335991-64336010 | None:intergenic | 50.0% |
| ! | CGGCTAATTTGGAACGGATG+GGG | - | chr5_1:64335992-64336011 | None:intergenic | 50.0% |
| ! | CACGGCTAATTTGGAACGGA+TGG | - | chr5_1:64335994-64336013 | None:intergenic | 50.0% |
| CATCCGTTCCAAATTAGCCG+TGG | + | chr5_1:64335992-64336011 | Msa0743870:intron | 50.0% | |
| ! | TGGTTTGGGGAGTCACCAAA+TGG | + | chr5_1:64336632-64336651 | Msa0743870:CDS | 50.0% |
| GGTTTGGGGAGTCACCAAAT+GGG | + | chr5_1:64336633-64336652 | Msa0743870:CDS | 50.0% | |
| CCTGCATAAGCAGTCATACC+AGG | - | chr5_1:64336840-64336859 | None:intergenic | 50.0% | |
| CCTGGTATGACTGCTTATGC+AGG | + | chr5_1:64336837-64336856 | Msa0743870:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 64335682 | 64336896 | 64335682 | ID=Msa0743870;Name=Msa0743870 |
| chr5_1 | mRNA | 64335682 | 64336896 | 64335682 | ID=Msa0743870-mRNA-1;Parent=Msa0743870;Name=Msa0743870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|158 |
| chr5_1 | exon | 64335682 | 64335912 | 64335682 | ID=Msa0743870-mRNA-1:exon:19003;Parent=Msa0743870-mRNA-1 |
| chr5_1 | exon | 64336565 | 64336742 | 64336565 | ID=Msa0743870-mRNA-1:exon:19004;Parent=Msa0743870-mRNA-1 |
| chr5_1 | exon | 64336832 | 64336896 | 64336832 | ID=Msa0743870-mRNA-1:exon:19005;Parent=Msa0743870-mRNA-1 |
| chr5_1 | CDS | 64335682 | 64335912 | 64335682 | ID=Msa0743870-mRNA-1:cds;Parent=Msa0743870-mRNA-1 |
| chr5_1 | CDS | 64336565 | 64336742 | 64336565 | ID=Msa0743870-mRNA-1:cds;Parent=Msa0743870-mRNA-1 |
| chr5_1 | CDS | 64336832 | 64336896 | 64336832 | ID=Msa0743870-mRNA-1:cds;Parent=Msa0743870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
