AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0743870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0743870 MtrunA17_Chr8g0335881 58.442 154 63 1 4 157 3 155 1.55e-59 184
Msa0743870 MtrunA17_Chr8g0337361 58.442 154 63 1 4 157 62 214 1.50e-57 184
Msa0743870 MtrunA17_Chr8g0337451 56.410 156 64 2 4 157 3 156 1.52e-57 182
Msa0743870 MtrunA17_Chr8g0337471 57.419 155 64 2 4 157 3 156 2.15e-57 182
Msa0743870 MtrunA17_Chr4g0043061 56.688 157 64 2 3 157 8 162 6.91e-57 181
Msa0743870 MtrunA17_Chr8g0337491 54.819 166 62 3 4 157 3 167 5.96e-56 181
Msa0743870 MtrunA17_Chr8g0337491 54.717 53 23 1 4 56 369 420 8.54e-11 58.9
Msa0743870 MtrunA17_Chr8g0337371 55.844 154 66 2 4 157 498 649 8.76e-53 179
Msa0743870 MtrunA17_Chr8g0337371 54.305 151 67 2 7 157 54 202 3.43e-50 171
Msa0743870 MtrunA17_Chr7g0214831 55.128 156 68 2 4 158 5 159 3.52e-50 164
Msa0743870 MtrunA17_Chr8g0337481 66.279 86 29 0 72 157 12 97 7.06e-38 130
Msa0743870 MtrunA17_Chr5g0445911 98.113 53 0 1 25 77 1 52 4.26e-30 104
Msa0743870 MtrunA17_Chr2g0307121 35.849 159 95 4 4 157 2 158 1.80e-26 102
Msa0743870 MtrunA17_Chr2g0322531 33.544 158 100 5 1 154 1 157 1.59e-15 72.4
Msa0743870 MtrunA17_Chr2g0322551 32.716 162 101 6 1 156 1 160 5.67e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0743870 AT1G26320.2 59.236 157 58 3 5 157 9 163 8.99e-57 181
Msa0743870 AT1G26320.1 59.236 157 58 3 5 157 9 163 9.07e-57 181
Msa0743870 AT5G17000.2 56.051 157 59 4 7 157 5 157 1.49e-56 177
Msa0743870 AT5G16990.1 56.410 156 59 4 7 157 4 155 3.38e-56 179
Msa0743870 AT3G03080.1 57.692 156 61 2 5 157 9 162 1.81e-55 178
Msa0743870 AT5G17000.1 56.051 157 59 4 7 157 5 157 2.57e-55 177
Msa0743870 AT5G16970.1 55.414 157 60 4 7 157 5 157 2.59e-55 177
Msa0743870 AT5G37940.1 54.430 158 61 4 7 157 12 165 1.92e-53 172
Msa0743870 AT5G38000.1 52.532 158 64 4 7 157 12 165 2.60e-51 167
Msa0743870 AT5G38000.3 52.532 158 64 4 7 157 12 165 3.04e-51 167
Msa0743870 AT5G16960.2 53.846 156 66 3 6 157 5 158 1.28e-50 165
Msa0743870 AT5G16960.1 53.846 156 66 3 6 157 5 158 1.28e-50 165
Msa0743870 AT5G37980.1 50.641 156 70 3 7 157 12 165 2.35e-49 162
Msa0743870 AT3G59845.1 46.584 161 81 3 1 157 1 160 2.29e-43 146
Msa0743870 AT1G65560.1 48.171 164 75 5 1 157 1 161 3.53e-42 144
Msa0743870 AT5G38000.2 50.725 138 57 4 7 137 12 145 4.07e-40 138
Msa0743870 AT1G65560.2 51.807 83 35 2 79 157 4 85 2.69e-22 90.1
Msa0743870 AT5G16980.2 33.113 151 62 3 7 157 6 117 1.71e-18 80.5
Msa0743870 AT3G59845.2 55.932 59 24 2 100 157 1 58 2.24e-16 73.9
Msa0743870 AT5G16980.1 73.810 42 11 0 116 157 10 51 6.72e-15 69.7
Msa0743870 AT5G16980.3 73.810 42 11 0 116 157 10 51 6.72e-15 69.7

Find 31 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACATAATCTCCTTTCTT+AGG 0.186749 5_1:-64336879 None:intergenic
TCTCAGCCAATTGTTGGATA+TGG 0.212277 5_1:+64336559 Msa0743870:intron
AAATACATGTCTGTTTGTTT+TGG 0.259959 5_1:-64335739 None:intergenic
GTACCTCTTTCCTATTATAC+TGG 0.275241 5_1:+64336712 Msa0743870:CDS
GCTTCTTCTGAAGCATCTTT+AGG 0.302866 5_1:-64335790 None:intergenic
ACCAAGTAATCCAGTATAAT+AGG 0.317896 5_1:-64336722 None:intergenic
TTTAGGAAGTTGTAAACTAA+TGG 0.368693 5_1:-64335773 None:intergenic
CATTGTGTACTTACTGAATC+TGG 0.374679 5_1:-64335904 None:intergenic
TCCTATTATACTGGATTACT+TGG 0.387026 5_1:+64336721 Msa0743870:CDS
TGTTTCTCTCAGCCAATTGT+TGG 0.398931 5_1:+64336553 Msa0743870:intron
CATACTCCATATCCAACAAT+TGG 0.417973 5_1:-64336565 None:intergenic
CTAGCTTCAGACTACATAAC+TGG 0.420922 5_1:+64335712 Msa0743870:CDS
AGACATAATCTCCTTTCTTA+GGG 0.438933 5_1:-64336878 None:intergenic
GATGCTGTACTCTTCCCATT+TGG 0.449214 5_1:-64336647 None:intergenic
TTTGATGAGGCTATCAGTCT+TGG 0.465767 5_1:-64336674 None:intergenic
TGGTTTGGGGAGTCACCAAA+TGG 0.470534 5_1:+64336632 Msa0743870:CDS
ATTATATATGTAGGTATGCC+TGG 0.474482 5_1:+64336819 Msa0743870:intron
ACTTACTGAATCTGGAGAAA+AGG 0.479229 5_1:-64335896 None:intergenic
CCTGGTATGACTGCTTATGC+AGG 0.485648 5_1:+64336837 Msa0743870:CDS
ATGAGAGGAACCAAAAGAAC+AGG 0.495779 5_1:+64335853 Msa0743870:CDS
AGAACAAGTGATCAACAAAC+AGG 0.499152 5_1:+64335687 Msa0743870:CDS
GAAGTTGGTGTCCCTAAGAA+AGG 0.513037 5_1:+64336867 Msa0743870:CDS
TATGCAGGTTTCTATGAAGT+TGG 0.517868 5_1:+64336852 Msa0743870:CDS
TGCTTCAGAAGAAGCTGTGT+TGG 0.523213 5_1:+64335798 Msa0743870:CDS
CCTGCATAAGCAGTCATACC+AGG 0.538967 5_1:-64336837 None:intergenic
AAGTTGTAAACTAATGGTAG+AGG 0.558112 5_1:-64335767 None:intergenic
AATCCAGTATAATAGGAAAG+AGG 0.565113 5_1:-64336715 None:intergenic
TCTTGTGATCCTTACATGAG+AGG 0.570442 5_1:+64335838 Msa0743870:CDS
ATATGGAGTATGCAAAGTGT+TGG 0.578801 5_1:+64336576 Msa0743870:CDS
CTGGAGAAAAGGAATAAAAG+AGG 0.580653 5_1:-64335885 None:intergenic
GGTTTGGGGAGTCACCAAAT+GGG 0.589430 5_1:+64336633 Msa0743870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTAATTTAAATGTATACT+TGG - chr5_1:64336062-64336081 None:intergenic 15.0%
!! AGTATACATTTAAATTAAAG+AGG + chr5_1:64336062-64336081 Msa0743870:intron 15.0%
!!! ACTTTTTTCTTTGTAAAATA+TGG - chr5_1:64336131-64336150 None:intergenic 15.0%
!!! ATATTTTACAAAGAAAAAAG+TGG + chr5_1:64336130-64336149 Msa0743870:intron 15.0%
!! ATATGATTAAGTCTATTATA+AGG + chr5_1:64336480-64336499 Msa0743870:intron 15.0%
!! TAATGAGTTATTATATATGT+AGG + chr5_1:64336810-64336829 Msa0743870:intron 15.0%
!!! CTTTAATTTAAATGTATACT+TGG - chr5_1:64336062-64336081 None:intergenic 15.0%
!! AGTATACATTTAAATTAAAG+AGG + chr5_1:64336062-64336081 Msa0743870:intron 15.0%
!!! ACTTTTTTCTTTGTAAAATA+TGG - chr5_1:64336131-64336150 None:intergenic 15.0%
!!! ATATTTTACAAAGAAAAAAG+TGG + chr5_1:64336130-64336149 Msa0743870:intron 15.0%
!! ATATGATTAAGTCTATTATA+AGG + chr5_1:64336480-64336499 Msa0743870:intron 15.0%
!! TAATGAGTTATTATATATGT+AGG + chr5_1:64336810-64336829 Msa0743870:intron 15.0%
!! AAACATCCAAATTTCAAAAA+AGG + chr5_1:64336604-64336623 Msa0743870:CDS 20.0%
!! AAACATCCAAATTTCAAAAA+AGG + chr5_1:64336604-64336623 Msa0743870:CDS 20.0%
!! AAATACATGTCTGTTTGTTT+TGG - chr5_1:64335742-64335761 None:intergenic 25.0%
! TTTAGGAAGTTGTAAACTAA+TGG - chr5_1:64335776-64335795 None:intergenic 25.0%
!! TTTTGGATATGATAAAACCA+CGG - chr5_1:64336012-64336031 None:intergenic 25.0%
!! TGTTATTTGAACAACCAATT+TGG + chr5_1:64336087-64336106 Msa0743870:intron 25.0%
! TACAAAGAAAAAAGTGGTAT+TGG + chr5_1:64336136-64336155 Msa0743870:intron 25.0%
! ATTCAAATCGGTTGTAAAAA+TGG - chr5_1:64336320-64336339 None:intergenic 25.0%
! TTGAGCGATAAAATTCAAAT+CGG - chr5_1:64336332-64336351 None:intergenic 25.0%
!!! AAGTCTCCTTTTTTGAAATT+TGG - chr5_1:64336613-64336632 None:intergenic 25.0%
! AAATTTCAAAAAAGGAGACT+TGG + chr5_1:64336612-64336631 Msa0743870:CDS 25.0%
!! AAATACATGTCTGTTTGTTT+TGG - chr5_1:64335742-64335761 None:intergenic 25.0%
! TTTAGGAAGTTGTAAACTAA+TGG - chr5_1:64335776-64335795 None:intergenic 25.0%
!! TTTTGGATATGATAAAACCA+CGG - chr5_1:64336012-64336031 None:intergenic 25.0%
!! TGTTATTTGAACAACCAATT+TGG + chr5_1:64336087-64336106 Msa0743870:intron 25.0%
! TACAAAGAAAAAAGTGGTAT+TGG + chr5_1:64336136-64336155 Msa0743870:intron 25.0%
! ATTCAAATCGGTTGTAAAAA+TGG - chr5_1:64336320-64336339 None:intergenic 25.0%
! TTGAGCGATAAAATTCAAAT+CGG - chr5_1:64336332-64336351 None:intergenic 25.0%
!!! AAGTCTCCTTTTTTGAAATT+TGG - chr5_1:64336613-64336632 None:intergenic 25.0%
! AAATTTCAAAAAAGGAGACT+TGG + chr5_1:64336612-64336631 Msa0743870:CDS 25.0%
AAGTTGTAAACTAATGGTAG+AGG - chr5_1:64335770-64335789 None:intergenic 30.0%
!!! GTTATTTTTGCCTGTTCTTT+TGG - chr5_1:64335866-64335885 None:intergenic 30.0%
CAAATAAGTTGTCACCAAAT+TGG - chr5_1:64336104-64336123 None:intergenic 30.0%
ACTTTATCTCTCTATTGCTA+TGG - chr5_1:64336170-64336189 None:intergenic 30.0%
! GATTTGAATTTTATCGCTCA+AGG + chr5_1:64336331-64336350 Msa0743870:intron 30.0%
ACGAATTATGTTGGAACTAA+GGG + chr5_1:64336439-64336458 Msa0743870:intron 30.0%
TATGTGATTATCTCTTCTAG+AGG + chr5_1:64336509-64336528 Msa0743870:intron 30.0%
AATCCAGTATAATAGGAAAG+AGG - chr5_1:64336718-64336737 None:intergenic 30.0%
TCCTATTATACTGGATTACT+TGG + chr5_1:64336721-64336740 Msa0743870:CDS 30.0%
ACCAAGTAATCCAGTATAAT+AGG - chr5_1:64336725-64336744 None:intergenic 30.0%
ATTATATATGTAGGTATGCC+TGG + chr5_1:64336819-64336838 Msa0743870:intron 30.0%
AAGTTGTAAACTAATGGTAG+AGG - chr5_1:64335770-64335789 None:intergenic 30.0%
!!! GTTATTTTTGCCTGTTCTTT+TGG - chr5_1:64335866-64335885 None:intergenic 30.0%
CAAATAAGTTGTCACCAAAT+TGG - chr5_1:64336104-64336123 None:intergenic 30.0%
ACTTTATCTCTCTATTGCTA+TGG - chr5_1:64336170-64336189 None:intergenic 30.0%
! GATTTGAATTTTATCGCTCA+AGG + chr5_1:64336331-64336350 Msa0743870:intron 30.0%
ACGAATTATGTTGGAACTAA+GGG + chr5_1:64336439-64336458 Msa0743870:intron 30.0%
TATGTGATTATCTCTTCTAG+AGG + chr5_1:64336509-64336528 Msa0743870:intron 30.0%
AATCCAGTATAATAGGAAAG+AGG - chr5_1:64336718-64336737 None:intergenic 30.0%
TCCTATTATACTGGATTACT+TGG + chr5_1:64336721-64336740 Msa0743870:CDS 30.0%
ACCAAGTAATCCAGTATAAT+AGG - chr5_1:64336725-64336744 None:intergenic 30.0%
ATTATATATGTAGGTATGCC+TGG + chr5_1:64336819-64336838 Msa0743870:intron 30.0%
AGAACAAGTGATCAACAAAC+AGG + chr5_1:64335687-64335706 Msa0743870:CDS 35.0%
CTGGAGAAAAGGAATAAAAG+AGG - chr5_1:64335888-64335907 None:intergenic 35.0%
ACTTACTGAATCTGGAGAAA+AGG - chr5_1:64335899-64335918 None:intergenic 35.0%
CATTGTGTACTTACTGAATC+TGG - chr5_1:64335907-64335926 None:intergenic 35.0%
TGATAAAACCACGGCTAATT+TGG - chr5_1:64336003-64336022 None:intergenic 35.0%
! GAACTTCGCAACACTTATTT+TGG - chr5_1:64336029-64336048 None:intergenic 35.0%
!! AGAAAAAAGTGGTATTGGCA+CGG + chr5_1:64336141-64336160 Msa0743870:intron 35.0%
GACGAATTATGTTGGAACTA+AGG + chr5_1:64336438-64336457 Msa0743870:intron 35.0%
CATACTCCATATCCAACAAT+TGG - chr5_1:64336568-64336587 None:intergenic 35.0%
ATATGGAGTATGCAAAGTGT+TGG + chr5_1:64336576-64336595 Msa0743870:CDS 35.0%
! TCAAAAAAGGAGACTTGGTT+TGG + chr5_1:64336617-64336636 Msa0743870:CDS 35.0%
! CAAAAAAGGAGACTTGGTTT+GGG + chr5_1:64336618-64336637 Msa0743870:CDS 35.0%
! AAAAAAGGAGACTTGGTTTG+GGG + chr5_1:64336619-64336638 Msa0743870:CDS 35.0%
GTACCTCTTTCCTATTATAC+TGG + chr5_1:64336712-64336731 Msa0743870:CDS 35.0%
TATGCAGGTTTCTATGAAGT+TGG + chr5_1:64336852-64336871 Msa0743870:CDS 35.0%
AGAACAAGTGATCAACAAAC+AGG + chr5_1:64335687-64335706 Msa0743870:CDS 35.0%
CTGGAGAAAAGGAATAAAAG+AGG - chr5_1:64335888-64335907 None:intergenic 35.0%
ACTTACTGAATCTGGAGAAA+AGG - chr5_1:64335899-64335918 None:intergenic 35.0%
CATTGTGTACTTACTGAATC+TGG - chr5_1:64335907-64335926 None:intergenic 35.0%
TGATAAAACCACGGCTAATT+TGG - chr5_1:64336003-64336022 None:intergenic 35.0%
! GAACTTCGCAACACTTATTT+TGG - chr5_1:64336029-64336048 None:intergenic 35.0%
!! AGAAAAAAGTGGTATTGGCA+CGG + chr5_1:64336141-64336160 Msa0743870:intron 35.0%
GACGAATTATGTTGGAACTA+AGG + chr5_1:64336438-64336457 Msa0743870:intron 35.0%
CATACTCCATATCCAACAAT+TGG - chr5_1:64336568-64336587 None:intergenic 35.0%
ATATGGAGTATGCAAAGTGT+TGG + chr5_1:64336576-64336595 Msa0743870:CDS 35.0%
! TCAAAAAAGGAGACTTGGTT+TGG + chr5_1:64336617-64336636 Msa0743870:CDS 35.0%
! CAAAAAAGGAGACTTGGTTT+GGG + chr5_1:64336618-64336637 Msa0743870:CDS 35.0%
! AAAAAAGGAGACTTGGTTTG+GGG + chr5_1:64336619-64336638 Msa0743870:CDS 35.0%
GTACCTCTTTCCTATTATAC+TGG + chr5_1:64336712-64336731 Msa0743870:CDS 35.0%
TATGCAGGTTTCTATGAAGT+TGG + chr5_1:64336852-64336871 Msa0743870:CDS 35.0%
CTAGCTTCAGACTACATAAC+TGG + chr5_1:64335712-64335731 Msa0743870:CDS 40.0%
!! GCTTCTTCTGAAGCATCTTT+AGG - chr5_1:64335793-64335812 None:intergenic 40.0%
TCTTGTGATCCTTACATGAG+AGG + chr5_1:64335838-64335857 Msa0743870:CDS 40.0%
!!! CTTTTGGTTCCTCTCATGTA+AGG - chr5_1:64335850-64335869 None:intergenic 40.0%
ATGAGAGGAACCAAAAGAAC+AGG + chr5_1:64335853-64335872 Msa0743870:CDS 40.0%
AAACCACGGCTAATTTGGAA+CGG - chr5_1:64335998-64336017 None:intergenic 40.0%
AGTTAAACTGTAACACCTCG+TGG + chr5_1:64336360-64336379 Msa0743870:intron 40.0%
TTAAGAATGTTGTGTCCACG+AGG - chr5_1:64336378-64336397 None:intergenic 40.0%
TTCATCTGTGCGAAAAGCTT+AGG + chr5_1:64336413-64336432 Msa0743870:intron 40.0%
CTTAGGACGACGAATTATGT+TGG + chr5_1:64336430-64336449 Msa0743870:intron 40.0%
TGTTTCTCTCAGCCAATTGT+TGG + chr5_1:64336553-64336572 Msa0743870:intron 40.0%
TCTCAGCCAATTGTTGGATA+TGG + chr5_1:64336559-64336578 Msa0743870:intron 40.0%
TTTGATGAGGCTATCAGTCT+TGG - chr5_1:64336677-64336696 None:intergenic 40.0%
!! CAGCATGCTCAATTTTGATG+AGG - chr5_1:64336690-64336709 None:intergenic 40.0%
CTAGCTTCAGACTACATAAC+TGG + chr5_1:64335712-64335731 Msa0743870:CDS 40.0%
!! GCTTCTTCTGAAGCATCTTT+AGG - chr5_1:64335793-64335812 None:intergenic 40.0%
TCTTGTGATCCTTACATGAG+AGG + chr5_1:64335838-64335857 Msa0743870:CDS 40.0%
!!! CTTTTGGTTCCTCTCATGTA+AGG - chr5_1:64335850-64335869 None:intergenic 40.0%
ATGAGAGGAACCAAAAGAAC+AGG + chr5_1:64335853-64335872 Msa0743870:CDS 40.0%
AAACCACGGCTAATTTGGAA+CGG - chr5_1:64335998-64336017 None:intergenic 40.0%
AGTTAAACTGTAACACCTCG+TGG + chr5_1:64336360-64336379 Msa0743870:intron 40.0%
TTAAGAATGTTGTGTCCACG+AGG - chr5_1:64336378-64336397 None:intergenic 40.0%
TTCATCTGTGCGAAAAGCTT+AGG + chr5_1:64336413-64336432 Msa0743870:intron 40.0%
CTTAGGACGACGAATTATGT+TGG + chr5_1:64336430-64336449 Msa0743870:intron 40.0%
TGTTTCTCTCAGCCAATTGT+TGG + chr5_1:64336553-64336572 Msa0743870:intron 40.0%
TCTCAGCCAATTGTTGGATA+TGG + chr5_1:64336559-64336578 Msa0743870:intron 40.0%
TTTGATGAGGCTATCAGTCT+TGG - chr5_1:64336677-64336696 None:intergenic 40.0%
!! CAGCATGCTCAATTTTGATG+AGG - chr5_1:64336690-64336709 None:intergenic 40.0%
TGCTTCAGAAGAAGCTGTGT+TGG + chr5_1:64335798-64335817 Msa0743870:CDS 45.0%
! ACGGCTAATTTGGAACGGAT+GGG - chr5_1:64335993-64336012 None:intergenic 45.0%
GATGCTGTACTCTTCCCATT+TGG - chr5_1:64336650-64336669 None:intergenic 45.0%
!! GAAGTTGGTGTCCCTAAGAA+AGG + chr5_1:64336867-64336886 Msa0743870:CDS 45.0%
TGCTTCAGAAGAAGCTGTGT+TGG + chr5_1:64335798-64335817 Msa0743870:CDS 45.0%
! ACGGCTAATTTGGAACGGAT+GGG - chr5_1:64335993-64336012 None:intergenic 45.0%
GATGCTGTACTCTTCCCATT+TGG - chr5_1:64336650-64336669 None:intergenic 45.0%
!! GAAGTTGGTGTCCCTAAGAA+AGG + chr5_1:64336867-64336886 Msa0743870:CDS 45.0%
! GGCTAATTTGGAACGGATGG+GGG - chr5_1:64335991-64336010 None:intergenic 50.0%
! CGGCTAATTTGGAACGGATG+GGG - chr5_1:64335992-64336011 None:intergenic 50.0%
! CACGGCTAATTTGGAACGGA+TGG - chr5_1:64335994-64336013 None:intergenic 50.0%
CATCCGTTCCAAATTAGCCG+TGG + chr5_1:64335992-64336011 Msa0743870:intron 50.0%
! TGGTTTGGGGAGTCACCAAA+TGG + chr5_1:64336632-64336651 Msa0743870:CDS 50.0%
GGTTTGGGGAGTCACCAAAT+GGG + chr5_1:64336633-64336652 Msa0743870:CDS 50.0%
CCTGCATAAGCAGTCATACC+AGG - chr5_1:64336840-64336859 None:intergenic 50.0%
CCTGGTATGACTGCTTATGC+AGG + chr5_1:64336837-64336856 Msa0743870:CDS 50.0%
! GGCTAATTTGGAACGGATGG+GGG - chr5_1:64335991-64336010 None:intergenic 50.0%
! CGGCTAATTTGGAACGGATG+GGG - chr5_1:64335992-64336011 None:intergenic 50.0%
! CACGGCTAATTTGGAACGGA+TGG - chr5_1:64335994-64336013 None:intergenic 50.0%
CATCCGTTCCAAATTAGCCG+TGG + chr5_1:64335992-64336011 Msa0743870:intron 50.0%
! TGGTTTGGGGAGTCACCAAA+TGG + chr5_1:64336632-64336651 Msa0743870:CDS 50.0%
GGTTTGGGGAGTCACCAAAT+GGG + chr5_1:64336633-64336652 Msa0743870:CDS 50.0%
CCTGCATAAGCAGTCATACC+AGG - chr5_1:64336840-64336859 None:intergenic 50.0%
CCTGGTATGACTGCTTATGC+AGG + chr5_1:64336837-64336856 Msa0743870:CDS 50.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 64335682 64336896 64335682 ID=Msa0743870;Name=Msa0743870
chr5_1 mRNA 64335682 64336896 64335682 ID=Msa0743870-mRNA-1;Parent=Msa0743870;Name=Msa0743870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|158
chr5_1 exon 64335682 64335912 64335682 ID=Msa0743870-mRNA-1:exon:19003;Parent=Msa0743870-mRNA-1
chr5_1 exon 64336565 64336742 64336565 ID=Msa0743870-mRNA-1:exon:19004;Parent=Msa0743870-mRNA-1
chr5_1 exon 64336832 64336896 64336832 ID=Msa0743870-mRNA-1:exon:19005;Parent=Msa0743870-mRNA-1
chr5_1 CDS 64335682 64335912 64335682 ID=Msa0743870-mRNA-1:cds;Parent=Msa0743870-mRNA-1
chr5_1 CDS 64336565 64336742 64336565 ID=Msa0743870-mRNA-1:cds;Parent=Msa0743870-mRNA-1
chr5_1 CDS 64336832 64336896 64336832 ID=Msa0743870-mRNA-1:cds;Parent=Msa0743870-mRNA-1
Gene Sequence

>Msa0743870

ATGGGAGAACAAGTGATCAACAAACAGGTTCTAGCTTCAGACTACATAACTGGTAATCCAAAACAAACAGACATGTATTTGAAAACCTCTACCATTAGTTTACAACTTCCTAAAGATGCTTCAGAAGAAGCTGTGTTGGTTAAGAACTTAGTTTTATCTTGTGATCCTTACATGAGAGGAACCAAAAGAACAGGCAAAAATAACCTCTTTTATTCCTTTTCTCCAGATTCACCAATTGTTGGATATGGAGTATGCAAAGTGTTGGATTCTAAACATCCAAATTTCAAAAAAGGAGACTTGGTTTGGGGAGTCACCAAATGGGAAGAGTACAGCATCATCACCAAGACTGATAGCCTCATCAAAATTGAGCATGCTGATGTACCTCTTTCCTATTATACTGGATTACTTGGTATGCCTGGTATGACTGCTTATGCAGGTTTCTATGAAGTTGGTGTCCCTAAGAAAGGAGATTAT

Protein sequence

>Msa0743870

MGEQVINKQVLASDYITGNPKQTDMYLKTSTISLQLPKDASEEAVLVKNLVLSCDPYMRGTKRTGKNNLFYSFSPDSPIVGYGVCKVLDSKHPNFKKGDLVWGVTKWEEYSIITKTDSLIKIEHADVPLSYYTGLLGMPGMTAYAGFYEVGVPKKGDY