Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138900 | sp|P17642|PRS2_SOLTU | 56.250 | 160 | 65 | 3 | 1 | 160 | 1 | 155 | 4.86e-61 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138900 | G7JLL1 | 97.500 | 160 | 4 | 0 | 1 | 160 | 1 | 160 | 4.44e-111 | 322 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0138900 | 0.867861 | 1.001611e-65 | -8.615850e-47 |
| Msa0004480 | Msa0138900 | 0.887981 | 8.847226e-73 | -8.615850e-47 |
| Msa0006060 | Msa0138900 | 0.805960 | 1.037242e-49 | -8.615850e-47 |
| Msa0011050 | Msa0138900 | 0.806063 | 9.867050e-50 | -8.615850e-47 |
| Msa0017660 | Msa0138900 | 0.807737 | 4.367458e-50 | -8.615850e-47 |
| Msa0026630 | Msa0138900 | 0.822525 | 2.260834e-53 | -8.615850e-47 |
| Msa0035020 | Msa0138900 | 0.805866 | 1.085250e-49 | -8.615850e-47 |
| Msa0043850 | Msa0138900 | 0.848808 | 4.839503e-60 | -8.615850e-47 |
| Msa0048390 | Msa0138900 | 0.801789 | 7.630052e-49 | -8.615850e-47 |
| Msa0059900 | Msa0138900 | 0.805756 | 1.144581e-49 | -8.615850e-47 |
| Msa0060070 | Msa0138900 | 0.816367 | 5.736015e-52 | -8.615850e-47 |
| Msa0061220 | Msa0138900 | 0.851684 | 7.561592e-61 | -8.615850e-47 |
| Msa0061500 | Msa0138900 | 0.818426 | 1.972154e-52 | -8.615850e-47 |
| Msa0071480 | Msa0138900 | 0.815573 | 8.626903e-52 | -8.615850e-47 |
| Msa0077370 | Msa0138900 | 0.814408 | 1.564647e-51 | -8.615850e-47 |
| Msa0082420 | Msa0138900 | 0.825874 | 3.694443e-54 | -8.615850e-47 |
| Msa0090380 | Msa0138900 | 0.856516 | 3.050934e-62 | -8.615850e-47 |
| Msa0090510 | Msa0138900 | 0.853853 | 1.815078e-61 | -8.615850e-47 |
| Msa0098290 | Msa0138900 | 0.810694 | 1.014913e-50 | -8.615850e-47 |
| Msa0104810 | Msa0138900 | 0.801127 | 1.042344e-48 | -8.615850e-47 |
| Msa0117520 | Msa0138900 | 0.818861 | 1.571867e-52 | -8.615850e-47 |
| Msa0119440 | Msa0138900 | 0.835758 | 1.392621e-56 | -8.615850e-47 |
| Msa0136630 | Msa0138900 | 0.864442 | 1.212441e-64 | -8.615850e-47 |
| Msa0137860 | Msa0138900 | 0.851205 | 1.032888e-60 | -8.615850e-47 |
| Msa0137980 | Msa0138900 | 0.840092 | 1.070910e-57 | -8.615850e-47 |
| Msa0138900 | Msa0139670 | 0.817641 | 2.967926e-52 | -8.615850e-47 |
| Msa0138900 | Msa0151220 | 0.812812 | 3.510778e-51 | -8.615850e-47 |
| Msa0138900 | Msa0152560 | 0.832851 | 7.466710e-56 | -8.615850e-47 |
| Msa0138900 | Msa0160960 | 0.822578 | 2.197787e-53 | -8.615850e-47 |
| Msa0138900 | Msa0162690 | 0.811425 | 7.047220e-51 | -8.615850e-47 |
| Msa0138900 | Msa0176260 | 0.854111 | 1.530001e-61 | -8.615850e-47 |
| Msa0138900 | Msa0183910 | 0.856060 | 4.153004e-62 | -8.615850e-47 |
| Msa0138900 | Msa0187310 | 0.850715 | 1.419313e-60 | -8.615850e-47 |
| Msa0138900 | Msa0196880 | 0.817864 | 2.642569e-52 | -8.615850e-47 |
| Msa0138900 | Msa0198730 | 0.819663 | 1.031960e-52 | -8.615850e-47 |
| Msa0138900 | Msa0213430 | 0.850639 | 1.491017e-60 | -8.615850e-47 |
| Msa0138900 | Msa0213540 | 0.828391 | 9.229219e-55 | -8.615850e-47 |
| Msa0138900 | Msa0224130 | 0.857250 | 1.855426e-62 | -8.615850e-47 |
| Msa0138900 | Msa0240270 | 0.802111 | 6.551877e-49 | -8.615850e-47 |
| Msa0138900 | Msa0241480 | 0.834944 | 2.235471e-56 | -8.615850e-47 |
| Msa0138900 | Msa0257490 | 0.815585 | 8.574013e-52 | -8.615850e-47 |
| Msa0138900 | Msa0259440 | 0.839522 | 1.506634e-57 | -8.615850e-47 |
| Msa0138900 | Msa0259580 | 0.833737 | 4.489823e-56 | -8.615850e-47 |
| Msa0138900 | Msa0264680 | 0.837216 | 5.925970e-57 | -8.615850e-47 |
| Msa0138900 | Msa0265270 | 0.855947 | 4.481537e-62 | -8.615850e-47 |
| Msa0138900 | Msa0276430 | 0.850441 | 1.694333e-60 | -8.615850e-47 |
| Msa0138900 | Msa0279430 | 0.857187 | 1.936124e-62 | -8.615850e-47 |
| Msa0138900 | Msa0292950 | 0.811252 | 7.681163e-51 | -8.615850e-47 |
| Msa0138900 | Msa0302730 | 0.850933 | 1.232243e-60 | -8.615850e-47 |
| Msa0138900 | Msa0305620 | 0.839548 | 1.483507e-57 | -8.615850e-47 |
| Msa0138900 | Msa0316470 | 0.837409 | 5.286442e-57 | -8.615850e-47 |
| Msa0138900 | Msa0319020 | 0.868041 | 8.764163e-66 | -8.615850e-47 |
| Msa0138900 | Msa0331020 | 0.835281 | 1.838120e-56 | -8.615850e-47 |
| Msa0138900 | Msa0364790 | 0.854358 | 1.297940e-61 | -8.615850e-47 |
| Msa0138900 | Msa0365950 | 0.812984 | 3.219542e-51 | -8.615850e-47 |
| Msa0138900 | Msa0378010 | 0.800057 | 1.723030e-48 | -8.615850e-47 |
| Msa0138900 | Msa0380600 | 0.866840 | 2.123852e-65 | -8.615850e-47 |
| Msa0138900 | Msa0382370 | 0.800139 | 1.658087e-48 | -8.615850e-47 |
| Msa0138900 | Msa0385500 | 0.800707 | 1.270219e-48 | -8.615850e-47 |
| Msa0138900 | Msa0388730 | 0.824676 | 7.094835e-54 | -8.615850e-47 |
| Msa0138900 | Msa0389210 | 0.812281 | 4.588183e-51 | -8.615850e-47 |
| Msa0138900 | Msa0389900 | 0.808943 | 2.415695e-50 | -8.615850e-47 |
| Msa0138900 | Msa0412260 | 0.821099 | 4.835014e-53 | -8.615850e-47 |
| Msa0138900 | Msa0413870 | 0.812972 | 3.238787e-51 | -8.615850e-47 |
| Msa0138900 | Msa0427580 | 0.819325 | 1.232214e-52 | -8.615850e-47 |
| Msa0138900 | Msa0430240 | 0.868398 | 6.725110e-66 | -8.615850e-47 |
| Msa0138900 | Msa0456770 | 0.843325 | 1.502039e-58 | -8.615850e-47 |
| Msa0138900 | Msa0472770 | 0.803909 | 2.782787e-49 | -8.615850e-47 |
| Msa0138900 | Msa0484630 | 0.804582 | 2.015435e-49 | -8.615850e-47 |
| Msa0138900 | Msa0484640 | 0.821892 | 3.170731e-53 | -8.615850e-47 |
| Msa0138900 | Msa0484800 | 0.813595 | 2.364536e-51 | -8.615850e-47 |
| Msa0138900 | Msa0500400 | 0.840718 | 7.344932e-58 | -8.615850e-47 |
| Msa0138900 | Msa0518170 | 0.834357 | 3.141778e-56 | -8.615850e-47 |
| Msa0138900 | Msa0519160 | 0.848487 | 5.939147e-60 | -8.615850e-47 |
| Msa0138900 | Msa0529000 | 0.818607 | 1.794587e-52 | -8.615850e-47 |
| Msa0138900 | Msa0534870 | 0.886075 | 4.688241e-72 | -8.615850e-47 |
| Msa0138900 | Msa0536350 | 0.819698 | 1.012919e-52 | -8.615850e-47 |
| Msa0138900 | Msa0545050 | 0.818658 | 1.747776e-52 | -8.615850e-47 |
| Msa0138900 | Msa0561360 | 0.805894 | 1.070924e-49 | -8.615850e-47 |
| Msa0138900 | Msa0567370 | 0.817514 | 3.170266e-52 | -8.615850e-47 |
| Msa0138900 | Msa0574930 | 0.827116 | 1.868115e-54 | -8.615850e-47 |
| Msa0138900 | Msa0584580 | 0.832873 | 7.372589e-56 | -8.615850e-47 |
| Msa0138900 | Msa0584600 | 0.822332 | 2.506999e-53 | -8.615850e-47 |
| Msa0138900 | Msa0592330 | 0.842441 | 2.581199e-58 | -8.615850e-47 |
| Msa0138900 | Msa0600590 | 0.838285 | 3.148856e-57 | -8.615850e-47 |
| Msa0138900 | Msa0604290 | 0.801299 | 9.615987e-49 | -8.615850e-47 |
| Msa0138900 | Msa0628810 | 0.801261 | 9.787267e-49 | -8.615850e-47 |
| Msa0138900 | Msa0629240 | 0.817554 | 3.104559e-52 | -8.615850e-47 |
| Msa0138900 | Msa0631320 | 0.879761 | 9.567500e-70 | -8.615850e-47 |
| Msa0138900 | Msa0641130 | 0.820515 | 6.586466e-53 | -8.615850e-47 |
| Msa0138900 | Msa0645500 | 0.801591 | 8.375550e-49 | -8.615850e-47 |
| Msa0138900 | Msa0654900 | 0.814627 | 1.399414e-51 | -8.615850e-47 |
| Msa0138900 | Msa0657120 | 0.814040 | 1.885845e-51 | -8.615850e-47 |
| Msa0138900 | Msa0669700 | 0.802740 | 4.861707e-49 | -8.615850e-47 |
| Msa0138900 | Msa0679670 | 0.831402 | 1.703812e-55 | -8.615850e-47 |
| Msa0138900 | Msa0697680 | 0.805738 | 1.154596e-49 | -8.615850e-47 |
| Msa0138900 | Msa0698450 | 0.815204 | 1.042019e-51 | -8.615850e-47 |
| Msa0138900 | Msa0698460 | 0.839138 | 1.895566e-57 | -8.615850e-47 |
| Msa0138900 | Msa0701100 | 0.813527 | 2.446284e-51 | -8.615850e-47 |
| Msa0138900 | Msa0703810 | 0.835515 | 1.604607e-56 | -8.615850e-47 |
| Msa0138900 | Msa0709120 | 0.816523 | 5.292906e-52 | -8.615850e-47 |
| Msa0138900 | Msa0713060 | 0.817989 | 2.476714e-52 | -8.615850e-47 |
| Msa0138900 | Msa0720640 | 0.805077 | 1.588934e-49 | -8.615850e-47 |
| Msa0138900 | Msa0724370 | 0.812124 | 4.963851e-51 | -8.615850e-47 |
| Msa0138900 | Msa0735550 | 0.806708 | 7.214555e-50 | -8.615850e-47 |
| Msa0138900 | Msa0743870 | 0.819466 | 1.144693e-52 | -8.615850e-47 |
| Msa0138900 | Msa0744640 | 0.828153 | 1.052987e-54 | -8.615850e-47 |
| Msa0138900 | Msa0748660 | 0.824891 | 6.313831e-54 | -8.615850e-47 |
| Msa0138900 | Msa0764920 | 0.808429 | 3.111118e-50 | -8.615850e-47 |
| Msa0138900 | Msa0769720 | 0.853141 | 2.906865e-61 | -8.615850e-47 |
| Msa0138900 | Msa0772740 | 0.806470 | 8.099405e-50 | -8.615850e-47 |
| Msa0138900 | Msa0775560 | 0.810209 | 1.291695e-50 | -8.615850e-47 |
| Msa0138900 | Msa0787790 | 0.836588 | 8.571112e-57 | -8.615850e-47 |
| Msa0138900 | Msa0796580 | -0.821605 | 3.693631e-53 | -8.615850e-47 |
| Msa0138900 | Msa0812530 | 0.841997 | 3.383691e-58 | -8.615850e-47 |
| Msa0138900 | Msa0812950 | 0.816507 | 5.337012e-52 | -8.615850e-47 |
| Msa0138900 | Msa0824930 | 0.810361 | 1.197370e-50 | -8.615850e-47 |
| Msa0138900 | Msa0829650 | 0.805477 | 1.310258e-49 | -8.615850e-47 |
| Msa0138900 | Msa0841730 | 0.827219 | 1.765393e-54 | -8.615850e-47 |
| Msa0138900 | Msa0844610 | 0.805149 | 1.534828e-49 | -8.615850e-47 |
| Msa0138900 | Msa0852790 | 0.828609 | 8.174076e-55 | -8.615850e-47 |
| Msa0138900 | Msa0853440 | 0.811953 | 5.408519e-51 | -8.615850e-47 |
| Msa0138900 | Msa0863990 | 0.869362 | 3.276519e-66 | -8.615850e-47 |
| Msa0138900 | Msa0867870 | 0.800660 | 1.298433e-48 | -8.615850e-47 |
| Msa0138900 | Msa0870510 | 0.840051 | 1.097521e-57 | -8.615850e-47 |
| Msa0138900 | Msa0930740 | 0.839229 | 1.795678e-57 | -8.615850e-47 |
| Msa0138900 | Msa0945130 | 0.870310 | 1.607871e-66 | -8.615850e-47 |
| Msa0138900 | Msa0968050 | 0.822056 | 2.905586e-53 | -8.615850e-47 |
| Msa0138900 | Msa1013070 | 0.844935 | 5.552644e-59 | -8.615850e-47 |
| Msa0138900 | Msa1016960 | 0.824095 | 9.719038e-54 | -8.615850e-47 |
| Msa0138900 | Msa1023310 | 0.813969 | 1.955061e-51 | -8.615850e-47 |
| Msa0138900 | Msa1034590 | 0.801832 | 7.475285e-49 | -8.615850e-47 |
| Msa0138900 | Msa1054510 | 0.805720 | 1.164828e-49 | -8.615850e-47 |
| Msa0138900 | Msa1058200 | 0.810169 | 1.317435e-50 | -8.615850e-47 |
| Msa0138900 | Msa1062040 | 0.868404 | 6.695813e-66 | -8.615850e-47 |
| Msa0138900 | Msa1070540 | 0.809335 | 1.991100e-50 | -8.615850e-47 |
| Msa0138900 | Msa1074350 | 0.803250 | 3.812182e-49 | -8.615850e-47 |
| Msa0138900 | Msa1082360 | 0.816978 | 4.183959e-52 | -8.615850e-47 |
| Msa0138900 | Msa1089190 | 0.835003 | 2.160750e-56 | -8.615850e-47 |
| Msa0138900 | Msa1094280 | 0.806996 | 6.271986e-50 | -8.615850e-47 |
| Msa0138900 | Msa1101240 | 0.807280 | 5.460867e-50 | -8.615850e-47 |
| Msa0138900 | Msa1107200 | 0.866281 | 3.197890e-65 | -8.615850e-47 |
| Msa0138900 | Msa1109810 | 0.861267 | 1.156503e-63 | -8.615850e-47 |
| Msa0138900 | Msa1111610 | 0.808787 | 2.608885e-50 | -8.615850e-47 |
| Msa0138900 | Msa1113100 | 0.808418 | 3.127545e-50 | -8.615850e-47 |
| Msa0138900 | Msa1128270 | 0.817580 | 3.062782e-52 | -8.615850e-47 |
| Msa0138900 | Msa1131790 | 0.814063 | 1.864566e-51 | -8.615850e-47 |
| Msa0138900 | Msa1150780 | 0.857950 | 1.150914e-62 | -8.615850e-47 |
| Msa0138900 | Msa1156820 | 0.810625 | 1.050277e-50 | -8.615850e-47 |
| Msa0138900 | Msa1176170 | 0.801374 | 9.278609e-49 | -8.615850e-47 |
| Msa0138900 | Msa1176380 | 0.813147 | 2.965243e-51 | -8.615850e-47 |
| Msa0138900 | Msa1181060 | 0.805180 | 1.511638e-49 | -8.615850e-47 |
| Msa0138900 | Msa1183140 | 0.864856 | 8.994616e-65 | -8.615850e-47 |
| Msa0138900 | Msa1206270 | 0.805052 | 1.607889e-49 | -8.615850e-47 |
| Msa0138900 | Msa1208990 | 0.803163 | 3.974973e-49 | -8.615850e-47 |
| Msa0138900 | Msa1214170 | 0.810063 | 1.388470e-50 | -8.615850e-47 |
| Msa0138900 | Msa1218160 | 0.956385 | 3.342224e-114 | -8.615850e-47 |
| Msa0138900 | Msa1221960 | 0.813480 | 2.505200e-51 | -8.615850e-47 |
| Msa0138900 | Msa1225580 | 0.846049 | 2.772295e-59 | -8.615850e-47 |
| Msa0138900 | Msa1229480 | 0.844016 | 9.815489e-59 | -8.615850e-47 |
| Msa0138900 | Msa1234620 | 0.801756 | 7.747817e-49 | -8.615850e-47 |
| Msa0138900 | Msa1236470 | 0.800669 | 1.293402e-48 | -8.615850e-47 |
| Msa0138900 | Msa1238680 | 0.835633 | 1.497582e-56 | -8.615850e-47 |
| Msa0138900 | Msa1240970 | 0.807868 | 4.095602e-50 | -8.615850e-47 |
| Msa0138900 | Msa1244160 | 0.821717 | 3.481445e-53 | -8.615850e-47 |
| Msa0138900 | Msa1246780 | 0.829621 | 4.646721e-55 | -8.615850e-47 |
| Msa0138900 | Msa1252810 | 0.825475 | 4.594542e-54 | -8.615850e-47 |
| Msa0138900 | Msa1256810 | 0.804648 | 1.952856e-49 | -8.615850e-47 |
| Msa0138900 | Msa1259860 | 0.818108 | 2.327766e-52 | -8.615850e-47 |
| Msa0138900 | Msa1260060 | 0.813648 | 2.300924e-51 | -8.615850e-47 |
| Msa0138900 | Msa1260680 | 0.826663 | 2.397298e-54 | -8.615850e-47 |
| Msa0138900 | Msa1265020 | 0.814513 | 1.482688e-51 | -8.615850e-47 |
| Msa0138900 | Msa1277410 | 0.805138 | 1.542740e-49 | -8.615850e-47 |
| Msa0138900 | Msa1277780 | 0.840567 | 8.046011e-58 | -8.615850e-47 |
| Msa0138900 | Msa1280150 | 0.806859 | 6.702516e-50 | -8.615850e-47 |
| Msa0138900 | Msa1280170 | 0.855435 | 6.319301e-62 | -8.615850e-47 |
| Msa0138900 | Msa1285180 | 0.803539 | 3.322143e-49 | -8.615850e-47 |
| Msa0138900 | Msa1285200 | 0.820579 | 6.366867e-53 | -8.615850e-47 |
| Msa0138900 | Msa1285250 | 0.820565 | 6.412142e-53 | -8.615850e-47 |
| Msa0138900 | Msa1286210 | 0.844506 | 7.249020e-59 | -8.615850e-47 |
| Msa0138900 | Msa1286220 | 0.821143 | 4.721743e-53 | -8.615850e-47 |
| Msa0138900 | Msa1307160 | 0.831141 | 1.974479e-55 | -8.615850e-47 |
| Msa0138900 | Msa1307180 | 0.821028 | 5.018318e-53 | -8.615850e-47 |
| Msa0138900 | Msa1309760 | 0.852691 | 3.910577e-61 | -8.615850e-47 |
| Msa0138900 | Msa1312440 | 0.806879 | 6.638380e-50 | -8.615850e-47 |
| Msa0138900 | Msa1316360 | 0.832841 | 7.507037e-56 | -8.615850e-47 |
| Msa0138900 | Msa1316460 | 0.813723 | 2.215590e-51 | -8.615850e-47 |
| Msa0138900 | Msa1334840 | 0.803200 | 3.905411e-49 | -8.615850e-47 |
| Msa0138900 | Msa1337850 | 0.803029 | 4.236499e-49 | -8.615850e-47 |
| Msa0138900 | Msa1355510 | 0.838252 | 3.211454e-57 | -8.615850e-47 |
| Msa0138900 | Msa1360020 | 0.804466 | 2.131688e-49 | -8.615850e-47 |
| Msa0138900 | Msa1364080 | 0.848016 | 8.016458e-60 | -8.615850e-47 |
| Msa0138900 | Msa1369920 | -0.818875 | 1.559907e-52 | -8.615850e-47 |
| Msa0138900 | Msa1380220 | 0.803134 | 4.030551e-49 | -8.615850e-47 |
| Msa0138900 | Msa1382020 | 0.813262 | 2.798437e-51 | -8.615850e-47 |
| Msa0138900 | Msa1389640 | 0.818840 | 1.589073e-52 | -8.615850e-47 |
| Msa0138900 | Msa1407760 | 0.838411 | 2.922108e-57 | -8.615850e-47 |
| Msa0138900 | Msa1421210 | 0.807640 | 4.580428e-50 | -8.615850e-47 |
| Msa0138900 | Msa1423540 | 0.826375 | 2.807704e-54 | -8.615850e-47 |
| Msa0138900 | Msa1433410 | 0.858714 | 6.813888e-63 | -8.615850e-47 |
| Msa0138900 | Msa1437730 | 0.814645 | 1.386749e-51 | -8.615850e-47 |
| Msa0138900 | Msa1443620 | 0.856825 | 2.476061e-62 | -8.615850e-47 |
| Msa0138900 | Msa1443640 | 0.820928 | 5.292682e-53 | -8.615850e-47 |
| Msa0138900 | Msa1444120 | 0.800037 | 1.739397e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138900 | MtrunA17_Chr4g0067841 | 97.500 | 160 | 4 | 0 | 1 | 160 | 1 | 160 | 8.54e-115 | 322 |
| Msa0138900 | MtrunA17_Chr2g0295211 | 73.585 | 159 | 42 | 0 | 1 | 159 | 1 | 159 | 5.93e-89 | 256 |
| Msa0138900 | MtrunA17_Chr2g0295021 | 40.385 | 156 | 92 | 1 | 1 | 156 | 1 | 155 | 7.55e-38 | 127 |
| Msa0138900 | MtrunA17_Chr2g0295001 | 40.385 | 156 | 92 | 1 | 1 | 156 | 1 | 155 | 7.55e-38 | 127 |
| Msa0138900 | MtrunA17_Chr2g0295041 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 1.92e-35 | 120 |
| Msa0138900 | MtrunA17_Chr2g0295064 | 39.103 | 156 | 94 | 1 | 1 | 156 | 68 | 222 | 6.78e-35 | 121 |
| Msa0138900 | MtrunA17_Chr2g0295051 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 7.50e-35 | 119 |
| Msa0138900 | MtrunA17_Chr6g0462311 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 4.58e-34 | 117 |
| Msa0138900 | MtrunA17_Chr4g0067951 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 1.15e-33 | 116 |
| Msa0138900 | MtrunA17_Chr2g0295104 | 35.032 | 157 | 101 | 1 | 1 | 157 | 1 | 156 | 3.09e-31 | 110 |
| Msa0138900 | MtrunA17_Chr2g0295124 | 35.032 | 157 | 101 | 1 | 1 | 157 | 1 | 156 | 3.48e-31 | 110 |
| Msa0138900 | MtrunA17_Chr2g0295141 | 34.615 | 156 | 101 | 1 | 1 | 156 | 1 | 155 | 6.98e-30 | 106 |
| Msa0138900 | MtrunA17_Chr2g0295081 | 33.974 | 156 | 102 | 1 | 1 | 156 | 1 | 155 | 1.52e-29 | 105 |
| Msa0138900 | MtrunA17_Chr2g0295091 | 33.758 | 157 | 103 | 1 | 1 | 157 | 1 | 156 | 6.35e-29 | 104 |
| Msa0138900 | MtrunA17_Chr6g0462291 | 38.406 | 138 | 84 | 1 | 1 | 138 | 1 | 137 | 2.20e-28 | 103 |
| Msa0138900 | MtrunA17_Chr4g0067921 | 36.076 | 158 | 97 | 3 | 1 | 156 | 1 | 156 | 1.71e-27 | 100 |
| Msa0138900 | MtrunA17_Chr3g0100201 | 29.221 | 154 | 101 | 3 | 6 | 155 | 5 | 154 | 2.73e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAATCTCTAGCCATTTA+TGG | 0.194905 | 1_3:-72118377 | None:intergenic |
| ATAGCATGTGTGGCCATAAA+TGG | 0.272259 | 1_3:+72118364 | Msa0138900:three_prime_UTR |
| ACAAACTGTGGTAAGAGCTT+TGG | 0.325990 | 1_3:-72117221 | None:intergenic |
| TGATTGAAGGGGATCCATTA+GGG | 0.331913 | 1_3:+72117962 | Msa0138900:CDS |
| CAAACTGTGGTAAGAGCTTT+GGG | 0.338115 | 1_3:-72117220 | None:intergenic |
| CATGCTATAAGAACTTATTA+AGG | 0.375284 | 1_3:-72118349 | None:intergenic |
| TTCTAAGAAATTTCGTTTCA+AGG | 0.377486 | 1_3:+72117010 | Msa0138900:five_prime_UTR |
| ATGATTGAAGGGGATCCATT+AGG | 0.378730 | 1_3:+72117961 | Msa0138900:CDS |
| ATTGAAGGAGATGGAGGAGC+TGG | 0.382904 | 1_3:+72117260 | Msa0138900:CDS |
| ATGGCTAGAGATTGGTGGTT+TGG | 0.393597 | 1_3:+72118383 | Msa0138900:three_prime_UTR |
| GATTCAAGCTTGTCCCCTAA+TGG | 0.396419 | 1_3:-72117976 | None:intergenic |
| TGGAGGTTGTCTATGTAAAA+TGG | 0.399526 | 1_3:+72118035 | Msa0138900:CDS |
| TGTGCAACCATAGGGACATT+TGG | 0.430897 | 1_3:+72118304 | Msa0138900:three_prime_UTR |
| AGGAAGATGTAAAGGAAGGA+AGG | 0.431562 | 1_3:+72118097 | Msa0138900:CDS |
| TGCAAATACACTATGATTGA+AGG | 0.436438 | 1_3:+72117949 | Msa0138900:CDS |
| GCTTGAATCTGTTGCTTATG+AGG | 0.438070 | 1_3:+72117990 | Msa0138900:CDS |
| GCAAGCAGTTACAAGACTAT+TGG | 0.438215 | 1_3:+72118057 | Msa0138900:CDS |
| AAAGATGTTAGTATAATTGA+AGG | 0.444869 | 1_3:+72117245 | Msa0138900:CDS |
| ATAAGTTAGAAGCTATGTAT+TGG | 0.452726 | 1_3:+72118419 | Msa0138900:three_prime_UTR |
| AAAGATTGATGTGCTTGATA+AGG | 0.454495 | 1_3:+72117915 | Msa0138900:CDS |
| ACGCGATGGTGCAACGGTTG+AGG | 0.456171 | 1_3:-72117159 | None:intergenic |
| TGCTTATGAGGTGAAGTTTG+AGG | 0.471590 | 1_3:+72118002 | Msa0138900:CDS |
| AAGTTTGAGGCTACAAATGA+TGG | 0.474637 | 1_3:+72118015 | Msa0138900:CDS |
| AGACCAAGAGGGAGAGACTT+TGG | 0.478186 | 1_3:-72117053 | None:intergenic |
| TCTAAGAAATTTCGTTTCAA+GGG | 0.482824 | 1_3:+72117011 | Msa0138900:five_prime_UTR |
| AGACCAAAGTCTCTCCCTCT+TGG | 0.498721 | 1_3:+72117050 | Msa0138900:five_prime_UTR |
| GTTAGTATAATTGAAGGAGA+TGG | 0.504523 | 1_3:+72117251 | Msa0138900:CDS |
| TGTTAAAGAGGAAGATGTAA+AGG | 0.506693 | 1_3:+72118089 | Msa0138900:CDS |
| AACCATTCCAAATGTCCCTA+TGG | 0.508956 | 1_3:-72118311 | None:intergenic |
| TAATAAGTGTGTGCAACCAT+AGG | 0.510404 | 1_3:+72118295 | Msa0138900:three_prime_UTR |
| GAAGGAAGGGAAAGTACCAT+TGG | 0.512113 | 1_3:+72118111 | Msa0138900:CDS |
| CATTGGAATTTACAAAGTTG+TGG | 0.512917 | 1_3:+72118128 | Msa0138900:CDS |
| GGAAGATGTAAAGGAAGGAA+GGG | 0.521833 | 1_3:+72118098 | Msa0138900:CDS |
| GAACAAGTCAACTTCAATGA+AGG | 0.526221 | 1_3:+72117290 | Msa0138900:CDS |
| GCAAATACACTATGATTGAA+GGG | 0.531266 | 1_3:+72117950 | Msa0138900:CDS |
| AAAGAGGAAGATGTAAAGGA+AGG | 0.539687 | 1_3:+72118093 | Msa0138900:CDS |
| CACAACTTTGTAAATTCCAA+TGG | 0.553300 | 1_3:-72118127 | None:intergenic |
| AATAAGTGTGTGCAACCATA+GGG | 0.557043 | 1_3:+72118296 | Msa0138900:three_prime_UTR |
| AGTATAATTGAAGGAGATGG+AGG | 0.558565 | 1_3:+72117254 | Msa0138900:CDS |
| ATAAGTTCTTATAGCATGTG+TGG | 0.566334 | 1_3:+72118354 | Msa0138900:three_prime_UTR |
| AACCATAGGGACATTTGGAA+TGG | 0.577205 | 1_3:+72118309 | Msa0138900:three_prime_UTR |
| GGCCATAAATGGCTAGAGAT+TGG | 0.582190 | 1_3:+72118375 | Msa0138900:three_prime_UTR |
| TTTGTTTCAGATATTTGAAG+GGG | 0.583251 | 1_3:-72117894 | None:intergenic |
| TGAGGAATACTCATGTGTAA+AGG | 0.583283 | 1_3:-72117141 | None:intergenic |
| CAAATACACTATGATTGAAG+GGG | 0.588174 | 1_3:+72117951 | Msa0138900:CDS |
| CATAAATGGCTAGAGATTGG+TGG | 0.589589 | 1_3:+72118378 | Msa0138900:three_prime_UTR |
| GAACATACGCGATGGTGCAA+CGG | 0.605469 | 1_3:-72117165 | None:intergenic |
| CTAACATCTTTAACAAACTG+TGG | 0.611198 | 1_3:-72117233 | None:intergenic |
| TTTGAGGCTACAAATGATGG+AGG | 0.641637 | 1_3:+72118018 | Msa0138900:CDS |
| TGTGAATGATATAGACCAAG+AGG | 0.653527 | 1_3:-72117065 | None:intergenic |
| GTGAATGATATAGACCAAGA+GGG | 0.661189 | 1_3:-72117064 | None:intergenic |
| GATTGAAGGGGATCCATTAG+GGG | 0.664801 | 1_3:+72117963 | Msa0138900:CDS |
| AAAGCTGTGAACATACGCGA+TGG | 0.674937 | 1_3:-72117173 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTTTTATAAAAAAAAAG+TGG | - | chr1_3:72117577-72117596 | None:intergenic | 10.0% |
| !! | AAAAATATTACAAATTTGAA+TGG | - | chr1_3:72118251-72118270 | None:intergenic | 10.0% |
| !!! | AAGTTTTTATAAAAAAAAAG+TGG | - | chr1_3:72117577-72117596 | None:intergenic | 10.0% |
| !! | AAAAATATTACAAATTTGAA+TGG | - | chr1_3:72118251-72118270 | None:intergenic | 10.0% |
| !! | AATCTAAAAAAATTCACTAT+GGG | + | chr1_3:72117110-72117129 | Msa0138900:exon | 15.0% |
| !! | CTAAGATAAAATTTCTATTT+AGG | - | chr1_3:72117516-72117535 | None:intergenic | 15.0% |
| !! | AATCTAAAAAAATTCACTAT+GGG | + | chr1_3:72117110-72117129 | Msa0138900:exon | 15.0% |
| !! | CTAAGATAAAATTTCTATTT+AGG | - | chr1_3:72117516-72117535 | None:intergenic | 15.0% |
| !!! | TTTTAGATTGAAGATTTACA+AGG | - | chr1_3:72117099-72117118 | None:intergenic | 20.0% |
| !! | CAATCTAAAAAAATTCACTA+TGG | + | chr1_3:72117109-72117128 | Msa0138900:exon | 20.0% |
| !! | AAAGATGTTAGTATAATTGA+AGG | + | chr1_3:72117245-72117264 | Msa0138900:CDS | 20.0% |
| !! | AATTCTTTAACCAATATTTC+GGG | - | chr1_3:72117493-72117512 | None:intergenic | 20.0% |
| !! | GAATTCTTTAACCAATATTT+CGG | - | chr1_3:72117494-72117513 | None:intergenic | 20.0% |
| !!! | AAAATATTTTTGGATTGCTT+CGG | + | chr1_3:72117781-72117800 | Msa0138900:intron | 20.0% |
| !!! | TTTTGTTTCAGATATTTGAA+GGG | - | chr1_3:72117898-72117917 | None:intergenic | 20.0% |
| !!! | TTTTAGATTGAAGATTTACA+AGG | - | chr1_3:72117099-72117118 | None:intergenic | 20.0% |
| !! | CAATCTAAAAAAATTCACTA+TGG | + | chr1_3:72117109-72117128 | Msa0138900:exon | 20.0% |
| !! | AAAGATGTTAGTATAATTGA+AGG | + | chr1_3:72117245-72117264 | Msa0138900:CDS | 20.0% |
| !! | AATTCTTTAACCAATATTTC+GGG | - | chr1_3:72117493-72117512 | None:intergenic | 20.0% |
| !! | GAATTCTTTAACCAATATTT+CGG | - | chr1_3:72117494-72117513 | None:intergenic | 20.0% |
| !!! | AAAATATTTTTGGATTGCTT+CGG | + | chr1_3:72117781-72117800 | Msa0138900:intron | 20.0% |
| !!! | TTTTGTTTCAGATATTTGAA+GGG | - | chr1_3:72117898-72117917 | None:intergenic | 20.0% |
| !! | TTCTAAGAAATTTCGTTTCA+AGG | + | chr1_3:72117010-72117029 | Msa0138900:five_prime_UTR | 25.0% |
| ! | TCTAAGAAATTTCGTTTCAA+GGG | + | chr1_3:72117011-72117030 | Msa0138900:five_prime_UTR | 25.0% |
| ! | ATTCTTTAACCAATATTTCG+GGG | - | chr1_3:72117492-72117511 | None:intergenic | 25.0% |
| ! | ATTCAAGAAATAAACTTCTC+TGG | - | chr1_3:72117838-72117857 | None:intergenic | 25.0% |
| !! | GTATTTCTATTATGATATGC+AGG | + | chr1_3:72117868-72117887 | Msa0138900:intron | 25.0% |
| ! | TTTGTTTCAGATATTTGAAG+GGG | - | chr1_3:72117897-72117916 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTCAGATATTTGA+AGG | - | chr1_3:72117899-72117918 | None:intergenic | 25.0% |
| ! | CATGCTATAAGAACTTATTA+AGG | - | chr1_3:72118352-72118371 | None:intergenic | 25.0% |
| ! | ATAAGTTAGAAGCTATGTAT+TGG | + | chr1_3:72118419-72118438 | Msa0138900:three_prime_UTR | 25.0% |
| !! | TTCTAAGAAATTTCGTTTCA+AGG | + | chr1_3:72117010-72117029 | Msa0138900:five_prime_UTR | 25.0% |
| ! | TCTAAGAAATTTCGTTTCAA+GGG | + | chr1_3:72117011-72117030 | Msa0138900:five_prime_UTR | 25.0% |
| ! | ATTCTTTAACCAATATTTCG+GGG | - | chr1_3:72117492-72117511 | None:intergenic | 25.0% |
| ! | ATTCAAGAAATAAACTTCTC+TGG | - | chr1_3:72117838-72117857 | None:intergenic | 25.0% |
| !! | GTATTTCTATTATGATATGC+AGG | + | chr1_3:72117868-72117887 | Msa0138900:intron | 25.0% |
| ! | TTTGTTTCAGATATTTGAAG+GGG | - | chr1_3:72117897-72117916 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTCAGATATTTGA+AGG | - | chr1_3:72117899-72117918 | None:intergenic | 25.0% |
| ! | CATGCTATAAGAACTTATTA+AGG | - | chr1_3:72118352-72118371 | None:intergenic | 25.0% |
| ! | ATAAGTTAGAAGCTATGTAT+TGG | + | chr1_3:72118419-72118438 | Msa0138900:three_prime_UTR | 25.0% |
| CTAACATCTTTAACAAACTG+TGG | - | chr1_3:72117236-72117255 | None:intergenic | 30.0% | |
| GTTAGTATAATTGAAGGAGA+TGG | + | chr1_3:72117251-72117270 | Msa0138900:CDS | 30.0% | |
| AAATGTTTAACCAATGTCGT+TGG | + | chr1_3:72117606-72117625 | Msa0138900:intron | 30.0% | |
| AATGTTTAACCAATGTCGTT+GGG | + | chr1_3:72117607-72117626 | Msa0138900:intron | 30.0% | |
| AAAGATTGATGTGCTTGATA+AGG | + | chr1_3:72117915-72117934 | Msa0138900:CDS | 30.0% | |
| TGCAAATACACTATGATTGA+AGG | + | chr1_3:72117949-72117968 | Msa0138900:CDS | 30.0% | |
| GCAAATACACTATGATTGAA+GGG | + | chr1_3:72117950-72117969 | Msa0138900:CDS | 30.0% | |
| CAAATACACTATGATTGAAG+GGG | + | chr1_3:72117951-72117970 | Msa0138900:CDS | 30.0% | |
| !! | TGGAGATTTTGATGTTAAAG+AGG | + | chr1_3:72118077-72118096 | Msa0138900:CDS | 30.0% |
| TGTTAAAGAGGAAGATGTAA+AGG | + | chr1_3:72118089-72118108 | Msa0138900:CDS | 30.0% | |
| CACAACTTTGTAAATTCCAA+TGG | - | chr1_3:72118130-72118149 | None:intergenic | 30.0% | |
| CATTGGAATTTACAAAGTTG+TGG | + | chr1_3:72118128-72118147 | Msa0138900:CDS | 30.0% | |
| AAAAATCAAGCATAGACTTG+TGG | - | chr1_3:72118174-72118193 | None:intergenic | 30.0% | |
| ATAAGTTCTTATAGCATGTG+TGG | + | chr1_3:72118354-72118373 | Msa0138900:three_prime_UTR | 30.0% | |
| CTAACATCTTTAACAAACTG+TGG | - | chr1_3:72117236-72117255 | None:intergenic | 30.0% | |
| GTTAGTATAATTGAAGGAGA+TGG | + | chr1_3:72117251-72117270 | Msa0138900:CDS | 30.0% | |
| AAATGTTTAACCAATGTCGT+TGG | + | chr1_3:72117606-72117625 | Msa0138900:intron | 30.0% | |
| AATGTTTAACCAATGTCGTT+GGG | + | chr1_3:72117607-72117626 | Msa0138900:intron | 30.0% | |
| AAAGATTGATGTGCTTGATA+AGG | + | chr1_3:72117915-72117934 | Msa0138900:CDS | 30.0% | |
| TGCAAATACACTATGATTGA+AGG | + | chr1_3:72117949-72117968 | Msa0138900:CDS | 30.0% | |
| GCAAATACACTATGATTGAA+GGG | + | chr1_3:72117950-72117969 | Msa0138900:CDS | 30.0% | |
| CAAATACACTATGATTGAAG+GGG | + | chr1_3:72117951-72117970 | Msa0138900:CDS | 30.0% | |
| !! | TGGAGATTTTGATGTTAAAG+AGG | + | chr1_3:72118077-72118096 | Msa0138900:CDS | 30.0% |
| TGTTAAAGAGGAAGATGTAA+AGG | + | chr1_3:72118089-72118108 | Msa0138900:CDS | 30.0% | |
| CACAACTTTGTAAATTCCAA+TGG | - | chr1_3:72118130-72118149 | None:intergenic | 30.0% | |
| CATTGGAATTTACAAAGTTG+TGG | + | chr1_3:72118128-72118147 | Msa0138900:CDS | 30.0% | |
| AAAAATCAAGCATAGACTTG+TGG | - | chr1_3:72118174-72118193 | None:intergenic | 30.0% | |
| ATAAGTTCTTATAGCATGTG+TGG | + | chr1_3:72118354-72118373 | Msa0138900:three_prime_UTR | 30.0% | |
| GTGAATGATATAGACCAAGA+GGG | - | chr1_3:72117067-72117086 | None:intergenic | 35.0% | |
| TGTGAATGATATAGACCAAG+AGG | - | chr1_3:72117068-72117087 | None:intergenic | 35.0% | |
| TGAGGAATACTCATGTGTAA+AGG | - | chr1_3:72117144-72117163 | None:intergenic | 35.0% | |
| AGTATAATTGAAGGAGATGG+AGG | + | chr1_3:72117254-72117273 | Msa0138900:CDS | 35.0% | |
| GAACAAGTCAACTTCAATGA+AGG | + | chr1_3:72117290-72117309 | Msa0138900:CDS | 35.0% | |
| ! | TCTAAGACCTCAATATGTGT+TGG | - | chr1_3:72117352-72117371 | None:intergenic | 35.0% |
| ATGTTTAACCAATGTCGTTG+GGG | + | chr1_3:72117608-72117627 | Msa0138900:intron | 35.0% | |
| !!! | ATATTTTTGGATTGCTTCGG+TGG | + | chr1_3:72117784-72117803 | Msa0138900:intron | 35.0% |
| ! | AAGTTTGAGGCTACAAATGA+TGG | + | chr1_3:72118015-72118034 | Msa0138900:CDS | 35.0% |
| TGGAGGTTGTCTATGTAAAA+TGG | + | chr1_3:72118035-72118054 | Msa0138900:CDS | 35.0% | |
| AAAGAGGAAGATGTAAAGGA+AGG | + | chr1_3:72118093-72118112 | Msa0138900:CDS | 35.0% | |
| TAATAAGTGTGTGCAACCAT+AGG | + | chr1_3:72118295-72118314 | Msa0138900:three_prime_UTR | 35.0% | |
| AATAAGTGTGTGCAACCATA+GGG | + | chr1_3:72118296-72118315 | Msa0138900:three_prime_UTR | 35.0% | |
| GTGAATGATATAGACCAAGA+GGG | - | chr1_3:72117067-72117086 | None:intergenic | 35.0% | |
| TGTGAATGATATAGACCAAG+AGG | - | chr1_3:72117068-72117087 | None:intergenic | 35.0% | |
| TGAGGAATACTCATGTGTAA+AGG | - | chr1_3:72117144-72117163 | None:intergenic | 35.0% | |
| AGTATAATTGAAGGAGATGG+AGG | + | chr1_3:72117254-72117273 | Msa0138900:CDS | 35.0% | |
| GAACAAGTCAACTTCAATGA+AGG | + | chr1_3:72117290-72117309 | Msa0138900:CDS | 35.0% | |
| ! | TCTAAGACCTCAATATGTGT+TGG | - | chr1_3:72117352-72117371 | None:intergenic | 35.0% |
| ATGTTTAACCAATGTCGTTG+GGG | + | chr1_3:72117608-72117627 | Msa0138900:intron | 35.0% | |
| !!! | ATATTTTTGGATTGCTTCGG+TGG | + | chr1_3:72117784-72117803 | Msa0138900:intron | 35.0% |
| ! | AAGTTTGAGGCTACAAATGA+TGG | + | chr1_3:72118015-72118034 | Msa0138900:CDS | 35.0% |
| TGGAGGTTGTCTATGTAAAA+TGG | + | chr1_3:72118035-72118054 | Msa0138900:CDS | 35.0% | |
| AAAGAGGAAGATGTAAAGGA+AGG | + | chr1_3:72118093-72118112 | Msa0138900:CDS | 35.0% | |
| TAATAAGTGTGTGCAACCAT+AGG | + | chr1_3:72118295-72118314 | Msa0138900:three_prime_UTR | 35.0% | |
| AATAAGTGTGTGCAACCATA+GGG | + | chr1_3:72118296-72118315 | Msa0138900:three_prime_UTR | 35.0% | |
| CAAACTGTGGTAAGAGCTTT+GGG | - | chr1_3:72117223-72117242 | None:intergenic | 40.0% | |
| ACAAACTGTGGTAAGAGCTT+TGG | - | chr1_3:72117224-72117243 | None:intergenic | 40.0% | |
| AGTCGATCCAACACATATTG+AGG | + | chr1_3:72117342-72117361 | Msa0138900:intron | 40.0% | |
| TAATCACTGCCCCGAAATAT+TGG | + | chr1_3:72117480-72117499 | Msa0138900:intron | 40.0% | |
| TGTTTAACCAATGTCGTTGG+GGG | + | chr1_3:72117609-72117628 | Msa0138900:intron | 40.0% | |
| TTTATCTGATGTCGACCCAA+TGG | - | chr1_3:72117815-72117834 | None:intergenic | 40.0% | |
| ATGATTGAAGGGGATCCATT+AGG | + | chr1_3:72117961-72117980 | Msa0138900:CDS | 40.0% | |
| TGATTGAAGGGGATCCATTA+GGG | + | chr1_3:72117962-72117981 | Msa0138900:CDS | 40.0% | |
| ! | GCTTGAATCTGTTGCTTATG+AGG | + | chr1_3:72117990-72118009 | Msa0138900:CDS | 40.0% |
| TGCTTATGAGGTGAAGTTTG+AGG | + | chr1_3:72118002-72118021 | Msa0138900:CDS | 40.0% | |
| ! | TTTGAGGCTACAAATGATGG+AGG | + | chr1_3:72118018-72118037 | Msa0138900:CDS | 40.0% |
| GCAAGCAGTTACAAGACTAT+TGG | + | chr1_3:72118057-72118076 | Msa0138900:CDS | 40.0% | |
| AGGAAGATGTAAAGGAAGGA+AGG | + | chr1_3:72118097-72118116 | Msa0138900:CDS | 40.0% | |
| GGAAGATGTAAAGGAAGGAA+GGG | + | chr1_3:72118098-72118117 | Msa0138900:CDS | 40.0% | |
| AACCATAGGGACATTTGGAA+TGG | + | chr1_3:72118309-72118328 | Msa0138900:three_prime_UTR | 40.0% | |
| AACCATTCCAAATGTCCCTA+TGG | - | chr1_3:72118314-72118333 | None:intergenic | 40.0% | |
| ATAGCATGTGTGGCCATAAA+TGG | + | chr1_3:72118364-72118383 | Msa0138900:three_prime_UTR | 40.0% | |
| CACCAATCTCTAGCCATTTA+TGG | - | chr1_3:72118380-72118399 | None:intergenic | 40.0% | |
| CATAAATGGCTAGAGATTGG+TGG | + | chr1_3:72118378-72118397 | Msa0138900:three_prime_UTR | 40.0% | |
| CAAACTGTGGTAAGAGCTTT+GGG | - | chr1_3:72117223-72117242 | None:intergenic | 40.0% | |
| ACAAACTGTGGTAAGAGCTT+TGG | - | chr1_3:72117224-72117243 | None:intergenic | 40.0% | |
| AGTCGATCCAACACATATTG+AGG | + | chr1_3:72117342-72117361 | Msa0138900:intron | 40.0% | |
| TAATCACTGCCCCGAAATAT+TGG | + | chr1_3:72117480-72117499 | Msa0138900:intron | 40.0% | |
| TGTTTAACCAATGTCGTTGG+GGG | + | chr1_3:72117609-72117628 | Msa0138900:intron | 40.0% | |
| TTTATCTGATGTCGACCCAA+TGG | - | chr1_3:72117815-72117834 | None:intergenic | 40.0% | |
| ATGATTGAAGGGGATCCATT+AGG | + | chr1_3:72117961-72117980 | Msa0138900:CDS | 40.0% | |
| TGATTGAAGGGGATCCATTA+GGG | + | chr1_3:72117962-72117981 | Msa0138900:CDS | 40.0% | |
| ! | GCTTGAATCTGTTGCTTATG+AGG | + | chr1_3:72117990-72118009 | Msa0138900:CDS | 40.0% |
| TGCTTATGAGGTGAAGTTTG+AGG | + | chr1_3:72118002-72118021 | Msa0138900:CDS | 40.0% | |
| ! | TTTGAGGCTACAAATGATGG+AGG | + | chr1_3:72118018-72118037 | Msa0138900:CDS | 40.0% |
| GCAAGCAGTTACAAGACTAT+TGG | + | chr1_3:72118057-72118076 | Msa0138900:CDS | 40.0% | |
| AGGAAGATGTAAAGGAAGGA+AGG | + | chr1_3:72118097-72118116 | Msa0138900:CDS | 40.0% | |
| GGAAGATGTAAAGGAAGGAA+GGG | + | chr1_3:72118098-72118117 | Msa0138900:CDS | 40.0% | |
| AACCATAGGGACATTTGGAA+TGG | + | chr1_3:72118309-72118328 | Msa0138900:three_prime_UTR | 40.0% | |
| AACCATTCCAAATGTCCCTA+TGG | - | chr1_3:72118314-72118333 | None:intergenic | 40.0% | |
| ATAGCATGTGTGGCCATAAA+TGG | + | chr1_3:72118364-72118383 | Msa0138900:three_prime_UTR | 40.0% | |
| CACCAATCTCTAGCCATTTA+TGG | - | chr1_3:72118380-72118399 | None:intergenic | 40.0% | |
| CATAAATGGCTAGAGATTGG+TGG | + | chr1_3:72118378-72118397 | Msa0138900:three_prime_UTR | 40.0% | |
| AAAGCTGTGAACATACGCGA+TGG | - | chr1_3:72117176-72117195 | None:intergenic | 45.0% | |
| !! | TGCTTCGGTGGTTTTACCAT+TGG | + | chr1_3:72117796-72117815 | Msa0138900:intron | 45.0% |
| !! | GCTTCGGTGGTTTTACCATT+GGG | + | chr1_3:72117797-72117816 | Msa0138900:intron | 45.0% |
| GATTGAAGGGGATCCATTAG+GGG | + | chr1_3:72117963-72117982 | Msa0138900:CDS | 45.0% | |
| GATTCAAGCTTGTCCCCTAA+TGG | - | chr1_3:72117979-72117998 | None:intergenic | 45.0% | |
| !! | GAAGGAAGGGAAAGTACCAT+TGG | + | chr1_3:72118111-72118130 | Msa0138900:CDS | 45.0% |
| TGTGCAACCATAGGGACATT+TGG | + | chr1_3:72118304-72118323 | Msa0138900:three_prime_UTR | 45.0% | |
| GGCCATAAATGGCTAGAGAT+TGG | + | chr1_3:72118375-72118394 | Msa0138900:three_prime_UTR | 45.0% | |
| ! | ATGGCTAGAGATTGGTGGTT+TGG | + | chr1_3:72118383-72118402 | Msa0138900:three_prime_UTR | 45.0% |
| AAAGCTGTGAACATACGCGA+TGG | - | chr1_3:72117176-72117195 | None:intergenic | 45.0% | |
| !! | TGCTTCGGTGGTTTTACCAT+TGG | + | chr1_3:72117796-72117815 | Msa0138900:intron | 45.0% |
| !! | GCTTCGGTGGTTTTACCATT+GGG | + | chr1_3:72117797-72117816 | Msa0138900:intron | 45.0% |
| GATTGAAGGGGATCCATTAG+GGG | + | chr1_3:72117963-72117982 | Msa0138900:CDS | 45.0% | |
| GATTCAAGCTTGTCCCCTAA+TGG | - | chr1_3:72117979-72117998 | None:intergenic | 45.0% | |
| !! | GAAGGAAGGGAAAGTACCAT+TGG | + | chr1_3:72118111-72118130 | Msa0138900:CDS | 45.0% |
| TGTGCAACCATAGGGACATT+TGG | + | chr1_3:72118304-72118323 | Msa0138900:three_prime_UTR | 45.0% | |
| GGCCATAAATGGCTAGAGAT+TGG | + | chr1_3:72118375-72118394 | Msa0138900:three_prime_UTR | 45.0% | |
| ! | ATGGCTAGAGATTGGTGGTT+TGG | + | chr1_3:72118383-72118402 | Msa0138900:three_prime_UTR | 45.0% |
| !!! | CTAAAATTTAATAATTTTTT+TGG | - | chr1_3:72117412-72117431 | None:intergenic | 5.0% |
| !!! | AAATATTGATAAAATATTTT+TGG | + | chr1_3:72117771-72117790 | Msa0138900:intron | 5.0% |
| !!! | CTAAAATTTAATAATTTTTT+TGG | - | chr1_3:72117412-72117431 | None:intergenic | 5.0% |
| !!! | AAATATTGATAAAATATTTT+TGG | + | chr1_3:72117771-72117790 | Msa0138900:intron | 5.0% |
| AGACCAAAGTCTCTCCCTCT+TGG | + | chr1_3:72117050-72117069 | Msa0138900:five_prime_UTR | 50.0% | |
| AGACCAAGAGGGAGAGACTT+TGG | - | chr1_3:72117056-72117075 | None:intergenic | 50.0% | |
| GAACATACGCGATGGTGCAA+CGG | - | chr1_3:72117168-72117187 | None:intergenic | 50.0% | |
| ATTGAAGGAGATGGAGGAGC+TGG | + | chr1_3:72117260-72117279 | Msa0138900:CDS | 50.0% | |
| AAAGAGTCCCCCAACGACAT+TGG | - | chr1_3:72117619-72117638 | None:intergenic | 50.0% | |
| AGACCAAAGTCTCTCCCTCT+TGG | + | chr1_3:72117050-72117069 | Msa0138900:five_prime_UTR | 50.0% | |
| AGACCAAGAGGGAGAGACTT+TGG | - | chr1_3:72117056-72117075 | None:intergenic | 50.0% | |
| GAACATACGCGATGGTGCAA+CGG | - | chr1_3:72117168-72117187 | None:intergenic | 50.0% | |
| ATTGAAGGAGATGGAGGAGC+TGG | + | chr1_3:72117260-72117279 | Msa0138900:CDS | 50.0% | |
| AAAGAGTCCCCCAACGACAT+TGG | - | chr1_3:72117619-72117638 | None:intergenic | 50.0% | |
| ACGCGATGGTGCAACGGTTG+AGG | - | chr1_3:72117162-72117181 | None:intergenic | 60.0% | |
| ACGCGATGGTGCAACGGTTG+AGG | - | chr1_3:72117162-72117181 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 72116974 | 72118473 | 72116974 | ID=Msa0138900;Name=Msa0138900 |
| chr1_3 | mRNA | 72116974 | 72118473 | 72116974 | ID=Msa0138900-mRNA-1;Parent=Msa0138900;Name=Msa0138900-mRNA-1;_AED=0.32;_eAED=0.32;_QI=154|1|1|1|1|1|2|285|160 |
| chr1_3 | exon | 72116974 | 72117311 | 72116974 | ID=Msa0138900-mRNA-1:exon:25142;Parent=Msa0138900-mRNA-1 |
| chr1_3 | exon | 72117890 | 72118473 | 72117890 | ID=Msa0138900-mRNA-1:exon:25143;Parent=Msa0138900-mRNA-1 |
| chr1_3 | five_prime_UTR | 72116974 | 72117127 | 72116974 | ID=Msa0138900-mRNA-1:five_prime_utr;Parent=Msa0138900-mRNA-1 |
| chr1_3 | CDS | 72117128 | 72117311 | 72117128 | ID=Msa0138900-mRNA-1:cds;Parent=Msa0138900-mRNA-1 |
| chr1_3 | CDS | 72117890 | 72118188 | 72117890 | ID=Msa0138900-mRNA-1:cds;Parent=Msa0138900-mRNA-1 |
| chr1_3 | three_prime_UTR | 72118189 | 72118473 | 72118189 | ID=Msa0138900-mRNA-1:three_prime_utr;Parent=Msa0138900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
