Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022600 | KEH22972.1 | 96.491 | 57 | 2 | 0 | 217 | 273 | 210 | 266 | 4.30e-27 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022600 | sp|Q9LHT0|TRNHF_ARATH | 60.784 | 51 | 20 | 0 | 222 | 272 | 204 | 254 | 2.64e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022600 | A0A072U029 | 96.491 | 57 | 2 | 0 | 217 | 273 | 210 | 266 | 2.05e-27 | 116 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009210 | Msa1022600 | 0.805628 | 1.217625e-49 | -8.615850e-47 |
| Msa0028900 | Msa1022600 | 0.832874 | 7.370373e-56 | -8.615850e-47 |
| Msa0047400 | Msa1022600 | 0.804976 | 1.667705e-49 | -8.615850e-47 |
| Msa0058140 | Msa1022600 | 0.809362 | 1.964356e-50 | -8.615850e-47 |
| Msa0102290 | Msa1022600 | 0.808163 | 3.544677e-50 | -8.615850e-47 |
| Msa0625820 | Msa1022600 | 0.805806 | 1.117420e-49 | -8.615850e-47 |
| Msa0649140 | Msa1022600 | 0.808210 | 3.464693e-50 | -8.615850e-47 |
| Msa0663540 | Msa1022600 | 0.813770 | 2.163049e-51 | -8.615850e-47 |
| Msa0798500 | Msa1022600 | 0.806769 | 7.001916e-50 | -8.615850e-47 |
| Msa0803220 | Msa1022600 | 0.808749 | 2.658106e-50 | -8.615850e-47 |
| Msa0803930 | Msa1022600 | 0.811965 | 5.375820e-51 | -8.615850e-47 |
| Msa0811710 | Msa1022600 | 0.823670 | 1.222586e-53 | -8.615850e-47 |
| Msa0837040 | Msa1022600 | 0.809703 | 1.659454e-50 | -8.615850e-47 |
| Msa0371640 | Msa1022600 | 0.806482 | 8.050005e-50 | -8.615850e-47 |
| Msa0388000 | Msa1022600 | 0.803571 | 3.270967e-49 | -8.615850e-47 |
| Msa1022590 | Msa1022600 | 0.814777 | 1.296061e-51 | -8.615850e-47 |
| Msa1022600 | Msa1061310 | 0.814324 | 1.632588e-51 | -8.615850e-47 |
| Msa1022600 | Msa1061420 | 0.872962 | 2.124158e-67 | -8.615850e-47 |
| Msa1022600 | Msa1085580 | 0.801992 | 6.930226e-49 | -8.615850e-47 |
| Msa1022600 | Msa1106760 | 0.867249 | 1.572526e-65 | -8.615850e-47 |
| Msa1022600 | Msa1150170 | 0.817689 | 2.894546e-52 | -8.615850e-47 |
| Msa1022600 | Msa1235880 | 0.811639 | 6.331784e-51 | -8.615850e-47 |
| Msa1022600 | Msa1444750 | 0.805397 | 1.361795e-49 | -8.615850e-47 |
| Msa0274000 | Msa1022600 | 0.807000 | 6.257616e-50 | -8.615850e-47 |
| Msa0314620 | Msa1022600 | 0.810209 | 1.291667e-50 | -8.615850e-47 |
| Msa0347600 | Msa1022600 | 0.811339 | 7.354959e-51 | -8.615850e-47 |
| Msa0511930 | Msa1022600 | 0.808511 | 2.988165e-50 | -8.615850e-47 |
| Msa0527420 | Msa1022600 | 0.803166 | 3.968180e-49 | -8.615850e-47 |
| Msa0548230 | Msa1022600 | 0.816565 | 5.180403e-52 | -8.615850e-47 |
| Msa0934800 | Msa1022600 | 0.805807 | 1.116602e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022600 | MtrunA17_Chr7g0239451 | 96.491 | 57 | 2 | 0 | 217 | 273 | 210 | 266 | 3.95e-31 | 116 |
| Msa1022600 | MtrunA17_Chr7g0239461 | 79.630 | 54 | 11 | 0 | 220 | 273 | 163 | 216 | 5.66e-22 | 91.3 |
| Msa1022600 | MtrunA17_Chr7g0239511 | 66.129 | 62 | 15 | 1 | 211 | 272 | 210 | 265 | 5.57e-17 | 78.6 |
| Msa1022600 | MtrunA17_Chr7g0239501 | 79.070 | 43 | 9 | 0 | 230 | 272 | 223 | 265 | 7.46e-15 | 72.8 |
| Msa1022600 | MtrunA17_Chr3g0112141 | 55.357 | 56 | 25 | 0 | 218 | 273 | 208 | 263 | 7.84e-14 | 69.7 |
| Msa1022600 | MtrunA17_Chr7g0239491 | 65.306 | 49 | 17 | 0 | 225 | 273 | 216 | 264 | 2.16e-13 | 68.6 |
| Msa1022600 | MtrunA17_Chr7g0239481 | 71.429 | 42 | 12 | 0 | 230 | 271 | 222 | 263 | 6.06e-13 | 67.0 |
| Msa1022600 | MtrunA17_Chr3g0112171 | 60.870 | 46 | 18 | 0 | 227 | 272 | 215 | 260 | 8.44e-13 | 67.0 |
| Msa1022600 | MtrunA17_Chr4g0032181 | 62.500 | 48 | 18 | 0 | 225 | 272 | 199 | 246 | 2.06e-12 | 65.5 |
| Msa1022600 | MtrunA17_Chr3g0112271 | 65.116 | 43 | 15 | 0 | 230 | 272 | 220 | 262 | 2.11e-12 | 65.9 |
| Msa1022600 | MtrunA17_Chr3g0112151 | 65.116 | 43 | 15 | 0 | 230 | 272 | 289 | 331 | 2.37e-12 | 66.2 |
| Msa1022600 | MtrunA17_Chr3g0112261 | 52.941 | 51 | 24 | 0 | 222 | 272 | 214 | 264 | 2.17e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022600 | AT5G06060.1 | 60.784 | 51 | 20 | 0 | 222 | 272 | 204 | 254 | 2.69e-14 | 71.2 |
| Msa1022600 | AT2G29320.2 | 65.909 | 44 | 15 | 0 | 229 | 272 | 198 | 241 | 1.85e-12 | 65.9 |
| Msa1022600 | AT2G30670.1 | 69.767 | 43 | 13 | 0 | 230 | 272 | 210 | 252 | 2.47e-12 | 65.9 |
| Msa1022600 | AT2G29320.1 | 65.909 | 44 | 15 | 0 | 229 | 272 | 216 | 259 | 2.57e-12 | 65.9 |
| Msa1022600 | AT1G07440.1 | 48.649 | 74 | 30 | 2 | 204 | 272 | 186 | 256 | 2.92e-12 | 65.5 |
| Msa1022600 | AT2G29290.1 | 70.000 | 40 | 12 | 0 | 233 | 272 | 196 | 235 | 4.61e-12 | 64.7 |
| Msa1022600 | AT2G29360.1 | 67.442 | 43 | 14 | 0 | 230 | 272 | 219 | 261 | 4.96e-12 | 65.1 |
| Msa1022600 | AT2G29290.2 | 70.000 | 40 | 12 | 0 | 233 | 272 | 213 | 252 | 6.95e-12 | 64.7 |
| Msa1022600 | AT2G29350.3 | 56.897 | 58 | 23 | 1 | 215 | 272 | 166 | 221 | 7.70e-12 | 63.9 |
| Msa1022600 | AT2G29340.2 | 63.636 | 44 | 16 | 0 | 229 | 272 | 209 | 252 | 8.27e-12 | 64.3 |
| Msa1022600 | AT2G29340.1 | 63.636 | 44 | 16 | 0 | 229 | 272 | 209 | 252 | 1.05e-11 | 64.3 |
| Msa1022600 | AT2G29310.2 | 63.636 | 44 | 16 | 0 | 229 | 272 | 207 | 250 | 1.22e-11 | 63.9 |
| Msa1022600 | AT2G29300.1 | 65.909 | 44 | 15 | 0 | 229 | 272 | 210 | 253 | 1.47e-11 | 63.5 |
| Msa1022600 | AT2G29350.1 | 56.897 | 58 | 23 | 1 | 215 | 272 | 204 | 259 | 1.56e-11 | 63.5 |
| Msa1022600 | AT2G29300.2 | 65.909 | 44 | 15 | 0 | 229 | 272 | 210 | 253 | 1.63e-11 | 63.5 |
| Msa1022600 | AT2G29310.1 | 63.636 | 44 | 16 | 0 | 229 | 272 | 209 | 252 | 1.75e-11 | 63.5 |
| Msa1022600 | AT2G29330.1 | 68.293 | 41 | 13 | 0 | 232 | 272 | 212 | 252 | 1.77e-11 | 63.2 |
| Msa1022600 | AT2G29370.1 | 67.442 | 43 | 14 | 0 | 230 | 272 | 219 | 261 | 2.16e-11 | 63.2 |
| Msa1022600 | AT2G29260.1 | 62.791 | 43 | 16 | 0 | 230 | 272 | 271 | 313 | 4.63e-11 | 62.8 |
| Msa1022600 | AT2G29150.1 | 64.286 | 42 | 15 | 0 | 229 | 270 | 217 | 258 | 8.00e-11 | 61.6 |
Find 83 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGGCGGCGCCGCCACTTT+AGG | 0.210231 | 7_1:-49181937 | None:intergenic |
| GCGGCGGCGCCGCCACTTTA+GGG | 0.270438 | 7_1:-49181936 | None:intergenic |
| GTTTGGAGGCAAACTCGTTC+TGG | 0.329311 | 7_1:+49182307 | Msa1022600:CDS |
| GGGCTTTAGGAAATAGTAAC+CGG | 0.375070 | 7_1:+49179354 | Msa1022600:CDS |
| ATAGTAACCGGGTTCTAAAA+AGG | 0.397085 | 7_1:+49179366 | Msa1022600:CDS |
| GAGATTCGAGTACAGCAATA+AGG | 0.405922 | 7_1:-49182368 | None:intergenic |
| GGCCACCGCGCCGGAGTGAA+AGG | 0.411645 | 7_1:-49181908 | None:intergenic |
| TACACATGGCATTGTCTCAT+TGG | 0.414106 | 7_1:-49182860 | None:intergenic |
| GAAATTATTAGAGATGAAGA+TGG | 0.426154 | 7_1:+49182570 | Msa1022600:CDS |
| TCATGCTTCTTGCACCGGCT+TGG | 0.434711 | 7_1:+49182238 | Msa1022600:CDS |
| TCCGGTGAAACTAGGGCTTT+AGG | 0.436565 | 7_1:+49179341 | Msa1022600:CDS |
| TTTCACTCCGGCGCGGTGGC+CGG | 0.438327 | 7_1:+49181910 | Msa1022600:CDS |
| AGCTATAGCTTTATACCCTT+CGG | 0.447532 | 7_1:-49184276 | None:intergenic |
| ACACGGCGTCCGGTGAAACT+AGG | 0.449662 | 7_1:+49179333 | Msa1022600:CDS |
| GACTTATATAGGTGATGAAA+GGG | 0.454765 | 7_1:+49182828 | Msa1022600:intron |
| TGCATGATTATGTTCAAGTT+CGG | 0.458570 | 7_1:+49179264 | Msa1022600:CDS |
| TTACGTCATGCTTCTTGCAC+CGG | 0.460001 | 7_1:+49182233 | Msa1022600:CDS |
| TCATGGGTGGACACGGCGTC+CGG | 0.461010 | 7_1:+49179323 | Msa1022600:CDS |
| AGGGTGGCCGGCCACCGCGC+CGG | 0.462717 | 7_1:-49181917 | None:intergenic |
| GGACAAATAATAGCTATTGA+TGG | 0.472475 | 7_1:+49184398 | Msa1022600:CDS |
| TAAAGTGGCGGCGCCGCCGC+CGG | 0.474907 | 7_1:+49181939 | Msa1022600:CDS |
| AAAGGGTTCACCGGAGAAGA+TGG | 0.478729 | 7_1:-49181890 | None:intergenic |
| TCAAACTCCTACAGGTCGTA+TGG | 0.485964 | 7_1:+49184310 | Msa1022600:CDS |
| TGACTTATATAGGTGATGAA+AGG | 0.487651 | 7_1:+49182827 | Msa1022600:intron |
| CGCCGCCACTTTAGGGTGGC+CGG | 0.487683 | 7_1:-49181929 | None:intergenic |
| GAGACAATGCCATGTGTACT+TGG | 0.491255 | 7_1:+49182865 | Msa1022600:CDS |
| TCCTAAAGCCCTAGTTTCAC+CGG | 0.494367 | 7_1:-49179342 | None:intergenic |
| TGGTTGATGATGGTGGAGGA+AGG | 0.495360 | 7_1:+49182603 | Msa1022600:CDS |
| GTAGTGTCTCAAACTCCTAC+AGG | 0.497877 | 7_1:+49184302 | Msa1022600:CDS |
| GATGAGTCTTCCATCTTCTC+CGG | 0.505636 | 7_1:+49181880 | Msa1022600:CDS |
| CGTCGGAGAGGTTGCAACTT+GGG | 0.505693 | 7_1:-49179391 | None:intergenic |
| AAGTTTGTGGTGGTTGATGA+TGG | 0.506059 | 7_1:+49182593 | Msa1022600:CDS |
| AGACCTTCCACGTATAATCA+TGG | 0.512600 | 7_1:-49179445 | None:intergenic |
| TAGGTGATGAAAGGGGTGCT+TGG | 0.515788 | 7_1:+49182836 | Msa1022600:intron |
| TTTGTGGTGGTTGATGATGG+TGG | 0.521762 | 7_1:+49182596 | Msa1022600:CDS |
| AGTTCAAAGTCGAGGAGTCA+TGG | 0.521979 | 7_1:+49179306 | Msa1022600:CDS |
| CACGGCGTCCGGTGAAACTA+GGG | 0.524316 | 7_1:+49179334 | Msa1022600:CDS |
| CGTGAAGGAAAGAAAGCAAA+CGG | 0.530763 | 7_1:-49182203 | None:intergenic |
| CGAGGAGTCATGGGTGGACA+CGG | 0.538106 | 7_1:+49179316 | Msa1022600:CDS |
| TTACAGGATTATGACTCCGA+AGG | 0.544242 | 7_1:+49184260 | Msa1022600:intron |
| AACCTCTCCGACGTATATCA+TGG | 0.544794 | 7_1:+49179401 | Msa1022600:CDS |
| GTTCAAAGTCGAGGAGTCAT+GGG | 0.546240 | 7_1:+49179307 | Msa1022600:CDS |
| GGTGGCCGGCCACCCTAAAG+TGG | 0.546756 | 7_1:+49181924 | Msa1022600:CDS |
| GCCACCGCGCCGGAGTGAAA+GGG | 0.548677 | 7_1:-49181907 | None:intergenic |
| GTGGTGGTTGATGATGGTGG+AGG | 0.549333 | 7_1:+49182599 | Msa1022600:CDS |
| GTTCAAGTTCGGAGAAAACA+TGG | 0.562766 | 7_1:+49179275 | Msa1022600:CDS |
| TCCGGTGAACCCTTTCACTC+CGG | 0.564252 | 7_1:+49181898 | Msa1022600:CDS |
| GCGGCGCCGCCACTTTAGGG+TGG | 0.569525 | 7_1:-49181933 | None:intergenic |
| AAAGTAAGTAACTCCGGCGG+CGG | 0.570330 | 7_1:-49181952 | None:intergenic |
| GAAGGGTATAAAGCTATAGC+TGG | 0.570914 | 7_1:+49184278 | Msa1022600:CDS |
| ACGTCGGAGAGGTTGCAACT+TGG | 0.576663 | 7_1:-49179392 | None:intergenic |
| CCAGCTGCATCACATATCAC+TGG | 0.576865 | 7_1:+49184377 | Msa1022600:CDS |
| TTGTGGATTGGTGATGAACG+TGG | 0.585836 | 7_1:+49182540 | Msa1022600:CDS |
| GCCGGAGTGAAAGGGTTCAC+CGG | 0.586504 | 7_1:-49181899 | None:intergenic |
| GGCCGGCCACCCTAAAGTGG+CGG | 0.587917 | 7_1:+49181927 | Msa1022600:CDS |
| TTGGATGCTTGTACGAACTC+AGG | 0.594467 | 7_1:+49182257 | Msa1022600:CDS |
| CAAACTCCTACAGGTCGTAT+GGG | 0.597780 | 7_1:+49184311 | Msa1022600:CDS |
| TACAGGATTATGACTCCGAA+GGG | 0.604075 | 7_1:+49184261 | Msa1022600:intron |
| AAGTTCGGAGAAAACATGGT+GGG | 0.609065 | 7_1:+49179279 | Msa1022600:CDS |
| GCTCCATGATTATACGTGGA+AGG | 0.611476 | 7_1:+49179442 | Msa1022600:CDS |
| GAGATGAAGATGGAAGTTTG+TGG | 0.615825 | 7_1:+49182580 | Msa1022600:CDS |
| CCAGTGATATGTGATGCAGC+TGG | 0.625792 | 7_1:-49184377 | None:intergenic |
| ACCCTTTCACTCCGGCGCGG+TGG | 0.629276 | 7_1:+49181906 | Msa1022600:CDS |
| GTTCGTACAAGCATCCAAGC+CGG | 0.630019 | 7_1:-49182252 | None:intergenic |
| GGCTTTAGGAAATAGTAACC+GGG | 0.633218 | 7_1:+49179355 | Msa1022600:CDS |
| AAGGAAAGAAAGCAAACGGA+GGG | 0.642839 | 7_1:-49182199 | None:intergenic |
| GTTACAAGTCCAAGTACACA+TGG | 0.646996 | 7_1:-49182874 | None:intergenic |
| CAAATAATAGCTATTGATGG+AGG | 0.647210 | 7_1:+49184401 | Msa1022600:CDS |
| GTCTCTCCCATACGACCTGT+AGG | 0.653589 | 7_1:-49184317 | None:intergenic |
| TGACGTAAAGAAATTCGTGA+AGG | 0.658424 | 7_1:-49182218 | None:intergenic |
| TGGGTTGAAGTTCAAAGTCG+AGG | 0.659798 | 7_1:+49179298 | Msa1022600:CDS |
| CACCATGATATACGTCGGAG+AGG | 0.669045 | 7_1:-49179403 | None:intergenic |
| TGGATTGGTGATGAACGTGG+TGG | 0.673467 | 7_1:+49182543 | Msa1022600:CDS |
| CAAAGTCGAGGAGTCATGGG+TGG | 0.674581 | 7_1:+49179310 | Msa1022600:CDS |
| ACTTATATAGGTGATGAAAG+GGG | 0.677257 | 7_1:+49182829 | Msa1022600:intron |
| ACAGCAATAAGGCTTCAGAT+CGG | 0.679844 | 7_1:-49182357 | None:intergenic |
| ATGAAGATGGAAGTTTGTGG+TGG | 0.699282 | 7_1:+49182583 | Msa1022600:CDS |
| GAAGGAAAGAAAGCAAACGG+AGG | 0.713055 | 7_1:-49182200 | None:intergenic |
| ACTCGCTCCATGATTATACG+TGG | 0.713439 | 7_1:+49179438 | Msa1022600:CDS |
| CAAGTTCGGAGAAAACATGG+TGG | 0.730704 | 7_1:+49179278 | Msa1022600:CDS |
| TGAACCCTTTCACTCCGGCG+CGG | 0.737252 | 7_1:+49181903 | Msa1022600:CDS |
| CGTGACACCATGATATACGT+CGG | 0.739255 | 7_1:-49179408 | None:intergenic |
| GTGAAAGTAAGTAACTCCGG+CGG | 0.765676 | 7_1:-49181955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTATTTGAATTGA+AGG | + | chr7_1:49180201-49180220 | Msa1022600:intron | 10.0% |
| !!! | TTTAAAATGATTTTTTAACA+AGG | + | chr7_1:49183158-49183177 | Msa1022600:intron | 10.0% |
| !!! | TTAAAATGATTTTTTAACAA+GGG | + | chr7_1:49183159-49183178 | Msa1022600:intron | 10.0% |
| !!! | AAAAATTGATTAGTATTTTT+AGG | + | chr7_1:49183530-49183549 | Msa1022600:intron | 10.0% |
| !! | AATTAAACATTTATTCACAT+AGG | + | chr7_1:49179793-49179812 | Msa1022600:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+TGG | + | chr7_1:49180306-49180325 | Msa1022600:intron | 15.0% |
| !! | GATTTGATTAAGAAAATAAA+AGG | + | chr7_1:49180433-49180452 | Msa1022600:intron | 15.0% |
| !! | AAAATAAAAGGAAAATTCAA+TGG | + | chr7_1:49180445-49180464 | Msa1022600:intron | 15.0% |
| !! | AAATAAAAGGAAAATTCAAT+GGG | + | chr7_1:49180446-49180465 | Msa1022600:intron | 15.0% |
| !! | AATTAAATTGCAAGAAATAA+AGG | + | chr7_1:49180796-49180815 | Msa1022600:intron | 15.0% |
| !! | GAAATATGTATGAAAATATT+TGG | + | chr7_1:49181389-49181408 | Msa1022600:intron | 15.0% |
| !!! | TCACAATTTTTAACAAAAAA+TGG | + | chr7_1:49181453-49181472 | Msa1022600:intron | 15.0% |
| !!! | TTATTTTCTTGACATTTTTT+TGG | - | chr7_1:49181538-49181557 | None:intergenic | 15.0% |
| !!! | AAAAATTTTCTATATGTTCT+TGG | - | chr7_1:49181561-49181580 | None:intergenic | 15.0% |
| !!! | AGAACATATAGAAAATTTTT+AGG | + | chr7_1:49181561-49181580 | Msa1022600:intron | 15.0% |
| !!! | CAATTTTTTTGAATTTAAAC+AGG | + | chr7_1:49183225-49183244 | Msa1022600:intron | 15.0% |
| !!! | AACTTCTAAAAATTTGTTTA+CGG | + | chr7_1:49183789-49183808 | Msa1022600:intron | 15.0% |
| !!! | ATTTTTTATTTAGCATAGAA+AGG | + | chr7_1:49184011-49184030 | Msa1022600:intron | 15.0% |
| !!! | TTTTTTTTTTTTACAGAGTA+AGG | + | chr7_1:49184047-49184066 | Msa1022600:intron | 15.0% |
| !! | AAAGAATTACAATTCATTAT+AGG | + | chr7_1:49184187-49184206 | Msa1022600:intron | 15.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | - | chr7_1:49179966-49179985 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | + | chr7_1:49179966-49179985 | Msa1022600:intron | 20.0% |
| !!! | AAAAATGTTTTTGTTTCTGT+TGG | + | chr7_1:49180283-49180302 | Msa1022600:intron | 20.0% |
| !! | AATAAAAGGAAAATTCAATG+GGG | + | chr7_1:49180447-49180466 | Msa1022600:intron | 20.0% |
| !!! | ATTTTTCATAATAAACCTTG+GGG | - | chr7_1:49180479-49180498 | None:intergenic | 20.0% |
| !!! | CATTTTTCATAATAAACCTT+GGG | - | chr7_1:49180480-49180499 | None:intergenic | 20.0% |
| !!! | ACATTTTTCATAATAAACCT+TGG | - | chr7_1:49180481-49180500 | None:intergenic | 20.0% |
| !!! | TTTATGCACTTTTAATTTCT+TGG | - | chr7_1:49180725-49180744 | None:intergenic | 20.0% |
| !! | GAATTAGAATGTAAATACTT+AGG | - | chr7_1:49180768-49180787 | None:intergenic | 20.0% |
| !! | TATGTGAATTAGTGTAAAAT+TGG | - | chr7_1:49181105-49181124 | None:intergenic | 20.0% |
| !! | TTTCACAAGAAATTAACAAA+AGG | + | chr7_1:49181280-49181299 | Msa1022600:intron | 20.0% |
| !! | TAAAAGTGGAAAAATATATG+TGG | - | chr7_1:49181329-49181348 | None:intergenic | 20.0% |
| !!! | GTTGGAATTTTTTTTGATTT+TGG | + | chr7_1:49182499-49182518 | Msa1022600:intron | 20.0% |
| !!! | CAAATTTTTAAAAGACTGAA+AGG | + | chr7_1:49183382-49183401 | Msa1022600:intron | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr7_1:49183543-49183562 | Msa1022600:intron | 20.0% |
| !! | ATAACACATATTATATACAG+AGG | + | chr7_1:49183567-49183586 | Msa1022600:intron | 20.0% |
| !!! | ACATATTTTTTTTTTGGTAG+TGG | - | chr7_1:49183651-49183670 | None:intergenic | 20.0% |
| !!! | ACTCACACATATTTTTTTTT+TGG | - | chr7_1:49183657-49183676 | None:intergenic | 20.0% |
| !! | TTGGTTATGAATTAATCTTT+AGG | + | chr7_1:49183752-49183771 | Msa1022600:intron | 20.0% |
| !! | TGGTTATGAATTAATCTTTA+GGG | + | chr7_1:49183753-49183772 | Msa1022600:intron | 20.0% |
| !! | GTAGAAATTTCAAGATATTT+AGG | - | chr7_1:49184127-49184146 | None:intergenic | 20.0% |
| ! | TTACTTCTAATTGTTCTATG+AGG | - | chr7_1:49179583-49179602 | None:intergenic | 25.0% |
| ! | ATATAATCGACAATTCATTC+CGG | - | chr7_1:49179701-49179720 | None:intergenic | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | + | chr7_1:49179965-49179984 | Msa1022600:intron | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | + | chr7_1:49179970-49179989 | Msa1022600:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | + | chr7_1:49179971-49179990 | Msa1022600:intron | 25.0% |
| ! | GATTAGTGAATTGCAAAATA+TGG | + | chr7_1:49180385-49180404 | Msa1022600:intron | 25.0% |
| ! | ATATGGTCAAAGTATGATTA+AGG | + | chr7_1:49180402-49180421 | Msa1022600:intron | 25.0% |
| ! | GTATGTTTAGATGAATGTTT+AGG | - | chr7_1:49180557-49180576 | None:intergenic | 25.0% |
| ! | GCATTAGATAGTAAAAAAAG+TGG | + | chr7_1:49180891-49180910 | Msa1022600:intron | 25.0% |
| !! | TTGGCTTATAATTTTTCTTG+TGG | - | chr7_1:49181060-49181079 | None:intergenic | 25.0% |
| ! | ACAAGAAAAATTATAAGCCA+AGG | + | chr7_1:49181059-49181078 | Msa1022600:intron | 25.0% |
| !!! | TGTTTTGAATGTGTGATAAT+TGG | - | chr7_1:49181161-49181180 | None:intergenic | 25.0% |
| ! | TAAAGAACAACTCTAAATCA+GGG | + | chr7_1:49181182-49181201 | Msa1022600:intron | 25.0% |
| ! | TAATTGTTGCATGTTAAAAG+TGG | - | chr7_1:49181343-49181362 | None:intergenic | 25.0% |
| !!! | CATATTTCTTGATAGTTTTG+TGG | - | chr7_1:49181377-49181396 | None:intergenic | 25.0% |
| !!! | TACCACATATTTTTTAACCA+AGG | + | chr7_1:49181495-49181514 | Msa1022600:intron | 25.0% |
| ! | AACCTTGGTTAAAAAATATG+TGG | - | chr7_1:49181500-49181519 | None:intergenic | 25.0% |
| !!! | TGTTTTTATGTGTTAAACCT+TGG | - | chr7_1:49181515-49181534 | None:intergenic | 25.0% |
| !!! | AGGATTTTTTAGACAAGTTT+TGG | + | chr7_1:49181581-49181600 | Msa1022600:intron | 25.0% |
| ! | AAATGGCAGAAATAGAAAAA+AGG | + | chr7_1:49181682-49181701 | Msa1022600:intron | 25.0% |
| ! | AATGGCAGAAATAGAAAAAA+GGG | + | chr7_1:49181683-49181702 | Msa1022600:intron | 25.0% |
| !! | ATGAAGGTTCTAATAAAATG+GGG | - | chr7_1:49181797-49181816 | None:intergenic | 25.0% |
| !! | GATGAAGGTTCTAATAAAAT+GGG | - | chr7_1:49181798-49181817 | None:intergenic | 25.0% |
| !! | AGATGAAGGTTCTAATAAAA+TGG | - | chr7_1:49181799-49181818 | None:intergenic | 25.0% |
| ! | GTGCAAAAAAATTCGAAAAA+GGG | - | chr7_1:49181980-49181999 | None:intergenic | 25.0% |
| ! | AGTGCAAAAAAATTCGAAAA+AGG | - | chr7_1:49181981-49182000 | None:intergenic | 25.0% |
| !!! | TGTTTTGAAAATTTCGATAC+CGG | - | chr7_1:49182036-49182055 | None:intergenic | 25.0% |
| !! | TATGTATGATTTTAGATCCA+AGG | - | chr7_1:49182070-49182089 | None:intergenic | 25.0% |
| !!! | TTTTGATTTTGGTTTGAGAT+TGG | + | chr7_1:49182510-49182529 | Msa1022600:intron | 25.0% |
| ! | GAAATTATTAGAGATGAAGA+TGG | + | chr7_1:49182570-49182589 | Msa1022600:CDS | 25.0% |
| !!! | TGAATGTGAAATTTTGACTA+AGG | + | chr7_1:49182801-49182820 | Msa1022600:intron | 25.0% |
| !!! | GAATGTGAAATTTTGACTAA+GGG | + | chr7_1:49182802-49182821 | Msa1022600:intron | 25.0% |
| ! | TTTGCAAAATTCACATGTAA+GGG | - | chr7_1:49183436-49183455 | None:intergenic | 25.0% |
| ! | ATTTGCAAAATTCACATGTA+AGG | - | chr7_1:49183437-49183456 | None:intergenic | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr7_1:49183542-49183561 | Msa1022600:intron | 25.0% |
| !! | TATGTGTTATACCCTAATTT+TGG | - | chr7_1:49183557-49183576 | None:intergenic | 25.0% |
| !! | CATATTTTATGCATTGTCTA+GGG | - | chr7_1:49183605-49183624 | None:intergenic | 25.0% |
| !!! | ACTATTACTACTTTTAGTAG+TGG | - | chr7_1:49183948-49183967 | None:intergenic | 25.0% |
| ! | AATTTAGTGACTTCTAAATC+TGG | - | chr7_1:49183994-49184013 | None:intergenic | 25.0% |
| ! | TGCATGATTATGTTCAAGTT+CGG | + | chr7_1:49179264-49179283 | Msa1022600:CDS | 30.0% |
| TATAATCGACAATTCATTCC+GGG | - | chr7_1:49179700-49179719 | None:intergenic | 30.0% | |
| TTAATTTCTTGCAAACGTGT+GGG | - | chr7_1:49179779-49179798 | None:intergenic | 30.0% | |
| ! | TTTAATTTCTTGCAAACGTG+TGG | - | chr7_1:49179780-49179799 | None:intergenic | 30.0% |
| !! | AGCTGTTTTATCTTGGTTTT+CGG | + | chr7_1:49179906-49179925 | Msa1022600:intron | 30.0% |
| ! | TACGTTTGAACCTTTTAAAC+CGG | + | chr7_1:49179944-49179963 | Msa1022600:intron | 30.0% |
| !! | TAAGATATCACCGGTTTAAA+AGG | - | chr7_1:49179957-49179976 | None:intergenic | 30.0% |
| TAGGATACTATAGTCGTTAT+GGG | - | chr7_1:49180065-49180084 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | - | chr7_1:49180066-49180085 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | + | chr7_1:49180066-49180085 | Msa1022600:intron | 30.0% | |
| AAATTAAAGACGGTTCCTAT+AGG | - | chr7_1:49180084-49180103 | None:intergenic | 30.0% | |
| TTCTTCACTTAGCAAACTTT+AGG | - | chr7_1:49180155-49180174 | None:intergenic | 30.0% | |
| !! | AAGTTTGCTAAGTGAAGAAT+TGG | + | chr7_1:49180156-49180175 | Msa1022600:intron | 30.0% |
| !! | ACATTTTTGAGAGAGAACTA+CGG | - | chr7_1:49180271-49180290 | None:intergenic | 30.0% |
| GGAATTTGAAGAATAGAAAG+AGG | + | chr7_1:49180327-49180346 | Msa1022600:intron | 30.0% | |
| ! | CTAGCTATATATCTAAAGTG+AGG | + | chr7_1:49180608-49180627 | Msa1022600:intron | 30.0% |
| !!! | CTTTTAATTTCTTGGCAAAG+AGG | - | chr7_1:49180717-49180736 | None:intergenic | 30.0% |
| ATGAGATGCTTATGAAACAA+TGG | + | chr7_1:49180847-49180866 | Msa1022600:intron | 30.0% | |
| CTTATGAAACAATGGACAAA+GGG | + | chr7_1:49180855-49180874 | Msa1022600:intron | 30.0% | |
| ! | GACAAAGGGTTAGTAATAAT+AGG | + | chr7_1:49180869-49180888 | Msa1022600:intron | 30.0% |
| GAAAATGAAGCATATCAACA+TGG | + | chr7_1:49180917-49180936 | Msa1022600:intron | 30.0% | |
| TGGTGAAAAACAACAAAAAG+TGG | + | chr7_1:49180937-49180956 | Msa1022600:intron | 30.0% | |
| !! | ATCCATTTTGGCATTTTCAA+AGG | + | chr7_1:49181006-49181025 | Msa1022600:intron | 30.0% |
| !! | TCCATTTTGGCATTTTCAAA+GGG | + | chr7_1:49181007-49181026 | Msa1022600:intron | 30.0% |
| AATTATAAGCCAAGGAATCA+TGG | + | chr7_1:49181067-49181086 | Msa1022600:intron | 30.0% | |
| AATTTCATACCATGATTCCT+TGG | - | chr7_1:49181079-49181098 | None:intergenic | 30.0% | |
| GTAAAGAACAACTCTAAATC+AGG | + | chr7_1:49181181-49181200 | Msa1022600:intron | 30.0% | |
| AAAGAACAACTCTAAATCAG+GGG | + | chr7_1:49181183-49181202 | Msa1022600:intron | 30.0% | |
| ! | CAATTTTCACAAGAAATGCT+GGG | + | chr7_1:49181624-49181643 | Msa1022600:intron | 30.0% |
| TAGCATACTGGAAAAAGAAA+TGG | + | chr7_1:49181665-49181684 | Msa1022600:intron | 30.0% | |
| ATGGCAGAAATAGAAAAAAG+GGG | + | chr7_1:49181684-49181703 | Msa1022600:intron | 30.0% | |
| !! | GTTGTATTTTAGAGAGATGA+AGG | - | chr7_1:49181813-49181832 | None:intergenic | 30.0% |
| AAGAATTACCTCTGTTAAGA+TGG | + | chr7_1:49182105-49182124 | Msa1022600:intron | 30.0% | |
| ATTGTTTGAGAATCAGAAAC+TGG | + | chr7_1:49182398-49182417 | Msa1022600:intron | 30.0% | |
| ! | TTGAGATTGGTGAATTTTTG+TGG | + | chr7_1:49182523-49182542 | Msa1022600:intron | 30.0% |
| ! | ATTGGTGAATTTTTGTGGAT+TGG | + | chr7_1:49182528-49182547 | Msa1022600:CDS | 30.0% |
| AATAGAAGAGGGAAAGAAAA+TGG | + | chr7_1:49182748-49182767 | Msa1022600:intron | 30.0% | |
| ! | ACTAAGGGTTTGACTTATAT+AGG | + | chr7_1:49182817-49182836 | Msa1022600:intron | 30.0% |
| TGACTTATATAGGTGATGAA+AGG | + | chr7_1:49182827-49182846 | Msa1022600:intron | 30.0% | |
| GACTTATATAGGTGATGAAA+GGG | + | chr7_1:49182828-49182847 | Msa1022600:intron | 30.0% | |
| ACTTATATAGGTGATGAAAG+GGG | + | chr7_1:49182829-49182848 | Msa1022600:intron | 30.0% | |
| TGGACTCTAACAAACTTAAA+AGG | + | chr7_1:49182936-49182955 | Msa1022600:intron | 30.0% | |
| GGACTCTAACAAACTTAAAA+GGG | + | chr7_1:49182937-49182956 | Msa1022600:intron | 30.0% | |
| ! | ATGTAAATAACAAAAGTGCG+AGG | + | chr7_1:49182966-49182985 | Msa1022600:intron | 30.0% |
| AAAAGACTAAAATGCCCATA+GGG | + | chr7_1:49183260-49183279 | Msa1022600:intron | 30.0% | |
| ! | TTCAAACGCAATTTTTGAAC+TGG | + | chr7_1:49183304-49183323 | Msa1022600:intron | 30.0% |
| ACTTATTCACACTACTTGAA+AGG | + | chr7_1:49183352-49183371 | Msa1022600:intron | 30.0% | |
| TTGATCAGAGACATATCAAA+TGG | + | chr7_1:49183489-49183508 | Msa1022600:intron | 30.0% | |
| CACATATTATATACAGAGGT+CGG | + | chr7_1:49183571-49183590 | Msa1022600:intron | 30.0% | |
| ACATATTATATACAGAGGTC+GGG | + | chr7_1:49183572-49183591 | Msa1022600:intron | 30.0% | |
| ! | GCATATTTTATGCATTGTCT+AGG | - | chr7_1:49183606-49183625 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr7_1:49183607-49183626 | Msa1022600:intron | 30.0% | |
| CATAAAATATGCAAGGTCTA+GGG | + | chr7_1:49183614-49183633 | Msa1022600:intron | 30.0% | |
| !!! | TTTTTTTTTTGGTAGTGGCT+GGG | - | chr7_1:49183646-49183665 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTTTGGTAGTGGC+TGG | - | chr7_1:49183647-49183666 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGAAGTAGCATAG+TGG | - | chr7_1:49183685-49183704 | None:intergenic | 30.0% |
| AAAAGTTCTCGAGTAAATAG+TGG | + | chr7_1:49183704-49183723 | Msa1022600:intron | 30.0% | |
| AAGTAGTAATAGTTCACGTT+TGG | + | chr7_1:49183955-49183974 | Msa1022600:intron | 30.0% | |
| GAGTAAGGATAATTATTGAG+AGG | + | chr7_1:49184062-49184081 | Msa1022600:intron | 30.0% | |
| ! | ATGTTTATACTGCTTGTTAC+AGG | + | chr7_1:49184244-49184263 | Msa1022600:intron | 30.0% |
| GGACAAATAATAGCTATTGA+TGG | + | chr7_1:49184398-49184417 | Msa1022600:CDS | 30.0% | |
| CAAATAATAGCTATTGATGG+AGG | + | chr7_1:49184401-49184420 | Msa1022600:CDS | 30.0% | |
| !! | ATAGTAACCGGGTTCTAAAA+AGG | + | chr7_1:49179366-49179385 | Msa1022600:CDS | 35.0% |
| ATAATCGACAATTCATTCCG+GGG | - | chr7_1:49179699-49179718 | None:intergenic | 35.0% | |
| AGTGAACTTAGGATTTAGGA+GGG | - | chr7_1:49179724-49179743 | None:intergenic | 35.0% | |
| TAATTTCTTGCAAACGTGTG+GGG | - | chr7_1:49179778-49179797 | None:intergenic | 35.0% | |
| GAAAACCAAGATAAAACAGC+TGG | - | chr7_1:49179907-49179926 | None:intergenic | 35.0% | |
| !! | GCTGTTTTATCTTGGTTTTC+GGG | + | chr7_1:49179907-49179926 | Msa1022600:intron | 35.0% |
| TTTGCTAAGTGAAGAATTGG+AGG | + | chr7_1:49180159-49180178 | Msa1022600:intron | 35.0% | |
| TTGCTAAGTGAAGAATTGGA+GGG | + | chr7_1:49180160-49180179 | Msa1022600:intron | 35.0% | |
| GCATGTTTAGATGTATGTCT+AGG | - | chr7_1:49180583-49180602 | None:intergenic | 35.0% | |
| GCTTATGAAACAATGGACAA+AGG | + | chr7_1:49180854-49180873 | Msa1022600:intron | 35.0% | |
| ! | TCTTGCTTGCTTAGGAATTT+TGG | - | chr7_1:49180985-49181004 | None:intergenic | 35.0% |
| !! | CCATTTTGGCATTTTCAAAG+GGG | + | chr7_1:49181008-49181027 | Msa1022600:intron | 35.0% |
| TTTCTTGTGGCTTTCACATT+GGG | - | chr7_1:49181047-49181066 | None:intergenic | 35.0% | |
| ! | TTTTCTTGTGGCTTTCACAT+TGG | - | chr7_1:49181048-49181067 | None:intergenic | 35.0% |
| GTGATAATTGGTTGCTTAGT+TGG | - | chr7_1:49181149-49181168 | None:intergenic | 35.0% | |
| ATACACCATAGCAAGACTTT+AGG | + | chr7_1:49181239-49181258 | Msa1022600:intron | 35.0% | |
| TTGATCCTAAAGTCTTGCTA+TGG | - | chr7_1:49181247-49181266 | None:intergenic | 35.0% | |
| ! | GCAATTTTCACAAGAAATGC+TGG | + | chr7_1:49181623-49181642 | Msa1022600:intron | 35.0% |
| TTCTTGATTCTTGTTCGATC+AGG | + | chr7_1:49182168-49182187 | Msa1022600:intron | 35.0% | |
| TGACGTAAAGAAATTCGTGA+AGG | - | chr7_1:49182221-49182240 | None:intergenic | 35.0% | |
| CCAAACGTAAAAAACGGTTT+CGG | - | chr7_1:49182293-49182312 | None:intergenic | 35.0% | |
| !!! | AAACCGTTTTTTACGTTTGG+AGG | + | chr7_1:49182293-49182312 | Msa1022600:CDS | 35.0% |
| TTGCCTCCAAACGTAAAAAA+CGG | - | chr7_1:49182299-49182318 | None:intergenic | 35.0% | |
| TTGATGAATTCGTCGTTGTA+CGG | + | chr7_1:49182422-49182441 | Msa1022600:intron | 35.0% | |
| TTATGGAGGATGAGAAAAGT+TGG | + | chr7_1:49182693-49182712 | Msa1022600:intron | 35.0% | |
| ! | AGGATGAGAAAAGTTGGTTA+GGG | + | chr7_1:49182699-49182718 | Msa1022600:intron | 35.0% |
| GGACTTGTAACAAACTCTTA+TGG | + | chr7_1:49182886-49182905 | Msa1022600:intron | 35.0% | |
| TCTTATGGACCAATAGCATT+TGG | + | chr7_1:49182901-49182920 | Msa1022600:intron | 35.0% | |
| GAAAAGACTAAAATGCCCAT+AGG | + | chr7_1:49183259-49183278 | Msa1022600:intron | 35.0% | |
| AAAGACTAAAATGCCCATAG+GGG | + | chr7_1:49183261-49183280 | Msa1022600:intron | 35.0% | |
| ACTGAAAGGAATCTTGACAT+AGG | + | chr7_1:49183396-49183415 | Msa1022600:intron | 35.0% | |
| AATGGCTTGAAATGCAAGAA+AGG | + | chr7_1:49183507-49183526 | Msa1022600:intron | 35.0% | |
| CATATTATATACAGAGGTCG+GGG | + | chr7_1:49183573-49183592 | Msa1022600:intron | 35.0% | |
| GCATAAAATATGCAAGGTCT+AGG | + | chr7_1:49183613-49183632 | Msa1022600:intron | 35.0% | |
| ! | TCTTCTCAGAGTATCACATT+TGG | + | chr7_1:49183733-49183752 | Msa1022600:intron | 35.0% |
| !! | AGCTATAGCTTTATACCCTT+CGG | - | chr7_1:49184279-49184298 | None:intergenic | 35.0% |
| ! | GTTCAAGTTCGGAGAAAACA+TGG | + | chr7_1:49179275-49179294 | Msa1022600:CDS | 40.0% |
| AAGTTCGGAGAAAACATGGT+GGG | + | chr7_1:49179279-49179298 | Msa1022600:CDS | 40.0% | |
| !! | GGGCTTTAGGAAATAGTAAC+CGG | + | chr7_1:49179354-49179373 | Msa1022600:CDS | 40.0% |
| !! | GGCTTTAGGAAATAGTAACC+GGG | + | chr7_1:49179355-49179374 | Msa1022600:CDS | 40.0% |
| !!! | TTGGGAACCTTTTTAGAACC+CGG | - | chr7_1:49179376-49179395 | None:intergenic | 40.0% |
| AGACCTTCCACGTATAATCA+TGG | - | chr7_1:49179448-49179467 | None:intergenic | 40.0% | |
| CTAAAACTCGAGACAACACT+CGG | + | chr7_1:49179494-49179513 | Msa1022600:intron | 40.0% | |
| TAGATAACCAAACCCATCCA+TGG | - | chr7_1:49179550-49179569 | None:intergenic | 40.0% | |
| ! | TGGATGGGTTTGGTTATCTA+CGG | + | chr7_1:49179550-49179569 | Msa1022600:intron | 40.0% |
| ATCGCATAATCCAAAACACG+AGG | + | chr7_1:49179669-49179688 | Msa1022600:intron | 40.0% | |
| TAATCGACAATTCATTCCGG+GGG | - | chr7_1:49179698-49179717 | None:intergenic | 40.0% | |
| GAGTGAACTTAGGATTTAGG+AGG | - | chr7_1:49179725-49179744 | None:intergenic | 40.0% | |
| GCTGAGTGAACTTAGGATTT+AGG | - | chr7_1:49179728-49179747 | None:intergenic | 40.0% | |
| AATATCAAAAGTCCTGCACC+CGG | - | chr7_1:49179751-49179770 | None:intergenic | 40.0% | |
| TAAAAATACAAGCGCAAGCG+TGG | + | chr7_1:49179837-49179856 | Msa1022600:intron | 40.0% | |
| CAAGCGTGGAAATAAAGACT+AGG | + | chr7_1:49179851-49179870 | Msa1022600:intron | 40.0% | |
| ! | TGGAGGGAGAAGAATGTTTT+TGG | + | chr7_1:49180176-49180195 | Msa1022600:intron | 40.0% |
| GTGGATTTGATCCCTTAATC+GGG | - | chr7_1:49180249-49180268 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAT+CGG | - | chr7_1:49180250-49180269 | None:intergenic | 40.0% |
| !! | TTTTTGAGAGAGAACTACGG+TGG | - | chr7_1:49180268-49180287 | None:intergenic | 40.0% |
| AAGAATAGAAAGAGGCCTCA+AGG | + | chr7_1:49180335-49180354 | Msa1022600:intron | 40.0% | |
| AGAATAGAAAGAGGCCTCAA+GGG | + | chr7_1:49180336-49180355 | Msa1022600:intron | 40.0% | |
| CATGGGATTAGGAAATTGTG+AGG | + | chr7_1:49180359-49180378 | Msa1022600:intron | 40.0% | |
| GGATTAGGAAATTGTGAGGT+TGG | + | chr7_1:49180363-49180382 | Msa1022600:intron | 40.0% | |
| ! | GTATCTAGGGCATGATGTAA+AGG | - | chr7_1:49180685-49180704 | None:intergenic | 40.0% |
| CATGCCCTAGATACATTCTA+TGG | + | chr7_1:49180691-49180710 | Msa1022600:intron | 40.0% | |
| GAGGCCATAGAATGTATCTA+GGG | - | chr7_1:49180698-49180717 | None:intergenic | 40.0% | |
| AGAGGCCATAGAATGTATCT+AGG | - | chr7_1:49180699-49180718 | None:intergenic | 40.0% | |
| AATGGATCTCTTGCTTGCTT+AGG | - | chr7_1:49180993-49181012 | None:intergenic | 40.0% | |
| ! | AGCAAGCAAGAGATCCATTT+TGG | + | chr7_1:49180994-49181013 | Msa1022600:intron | 40.0% |
| ! | CCCCTTTGAAAATGCCAAAA+TGG | - | chr7_1:49181011-49181030 | None:intergenic | 40.0% |
| ! | GGCATTTTCAAAGGGGTTTT+AGG | + | chr7_1:49181015-49181034 | Msa1022600:intron | 40.0% |
| TTCTTGTGGCTTTCACATTG+GGG | - | chr7_1:49181046-49181065 | None:intergenic | 40.0% | |
| ! | TGCTATGGTGTATTGATCCT+TGG | - | chr7_1:49181232-49181251 | None:intergenic | 40.0% |
| !!! | TAGACAAGTTTTGGACAGAC+AGG | + | chr7_1:49181590-49181609 | Msa1022600:intron | 40.0% |
| !!! | AGACAAGTTTTGGACAGACA+GGG | + | chr7_1:49181591-49181610 | Msa1022600:intron | 40.0% |
| TTCACAAGAAATGCTGGGAA+AGG | + | chr7_1:49181629-49181648 | Msa1022600:intron | 40.0% | |
| TCACAAGAAATGCTGGGAAA+GGG | + | chr7_1:49181630-49181649 | Msa1022600:intron | 40.0% | |
| CAGAAATAGAAAAAAGGGGC+TGG | + | chr7_1:49181688-49181707 | Msa1022600:intron | 40.0% | |
| ATCATCTTAGAGAGAGAGGA+GGG | - | chr7_1:49181840-49181859 | None:intergenic | 40.0% | |
| AATCATCTTAGAGAGAGAGG+AGG | - | chr7_1:49181841-49181860 | None:intergenic | 40.0% | |
| CAGAATCATCTTAGAGAGAG+AGG | - | chr7_1:49181844-49181863 | None:intergenic | 40.0% | |
| AGGGTGAAAGTAAGTAACTC+CGG | - | chr7_1:49181961-49181980 | None:intergenic | 40.0% | |
| AAAACATAACACGAACGCCT+TGG | + | chr7_1:49182050-49182069 | Msa1022600:intron | 40.0% | |
| ! | TTTTTCCCGTCCTTTAAGCT+CGG | - | chr7_1:49182136-49182155 | None:intergenic | 40.0% |
| AAGGAAAGAAAGCAAACGGA+GGG | - | chr7_1:49182202-49182221 | None:intergenic | 40.0% | |
| CGTGAAGGAAAGAAAGCAAA+CGG | - | chr7_1:49182206-49182225 | None:intergenic | 40.0% | |
| !!! | CCGAAACCGTTTTTTACGTT+TGG | + | chr7_1:49182290-49182309 | Msa1022600:CDS | 40.0% |
| ACAGCAATAAGGCTTCAGAT+CGG | - | chr7_1:49182360-49182379 | None:intergenic | 40.0% | |
| GAGATTCGAGTACAGCAATA+AGG | - | chr7_1:49182371-49182390 | None:intergenic | 40.0% | |
| TAGCGTGAACAACAACTTGT+TGG | + | chr7_1:49182481-49182500 | Msa1022600:intron | 40.0% | |
| GAGATGAAGATGGAAGTTTG+TGG | + | chr7_1:49182580-49182599 | Msa1022600:CDS | 40.0% | |
| ATGAAGATGGAAGTTTGTGG+TGG | + | chr7_1:49182583-49182602 | Msa1022600:CDS | 40.0% | |
| !! | AAGTTTGTGGTGGTTGATGA+TGG | + | chr7_1:49182593-49182612 | Msa1022600:CDS | 40.0% |
| GTTATGGAGGAAGAGAAAGT+TGG | + | chr7_1:49182649-49182668 | Msa1022600:intron | 40.0% | |
| ! | GAGGAAGAGAAAGTTGGTTA+GGG | + | chr7_1:49182655-49182674 | Msa1022600:intron | 40.0% |
| ! | GAGGATGAGAAAAGTTGGTT+AGG | + | chr7_1:49182698-49182717 | Msa1022600:intron | 40.0% |
| ! | ATGAGAAAAGTTGGTTAGGG+TGG | + | chr7_1:49182702-49182721 | Msa1022600:intron | 40.0% |
| ! | TGAGAAAAGTTGGTTAGGGT+GGG | + | chr7_1:49182703-49182722 | Msa1022600:intron | 40.0% |
| TACACATGGCATTGTCTCAT+TGG | - | chr7_1:49182863-49182882 | None:intergenic | 40.0% | |
| GTTACAAGTCCAAGTACACA+TGG | - | chr7_1:49182877-49182896 | None:intergenic | 40.0% | |
| ACCAATAGCATTTGGACACA+TGG | + | chr7_1:49182909-49182928 | Msa1022600:intron | 40.0% | |
| !! | TCGAGTCATTTTAGTCCCTA+GGG | - | chr7_1:49183121-49183140 | None:intergenic | 40.0% |
| !! | TTCGAGTCATTTTAGTCCCT+AGG | - | chr7_1:49183122-49183141 | None:intergenic | 40.0% |
| TTACAGGATTATGACTCCGA+AGG | + | chr7_1:49184260-49184279 | Msa1022600:intron | 40.0% | |
| TACAGGATTATGACTCCGAA+GGG | + | chr7_1:49184261-49184280 | Msa1022600:intron | 40.0% | |
| ! | GAAGGGTATAAAGCTATAGC+TGG | + | chr7_1:49184278-49184297 | Msa1022600:CDS | 40.0% |
| CAAGTTCGGAGAAAACATGG+TGG | + | chr7_1:49179278-49179297 | Msa1022600:CDS | 45.0% | |
| ! | TGGGTTGAAGTTCAAAGTCG+AGG | + | chr7_1:49179298-49179317 | Msa1022600:CDS | 45.0% |
| AGTTCAAAGTCGAGGAGTCA+TGG | + | chr7_1:49179306-49179325 | Msa1022600:CDS | 45.0% | |
| GTTCAAAGTCGAGGAGTCAT+GGG | + | chr7_1:49179307-49179326 | Msa1022600:CDS | 45.0% | |
| TCCTAAAGCCCTAGTTTCAC+CGG | - | chr7_1:49179345-49179364 | None:intergenic | 45.0% | |
| AACCTCTCCGACGTATATCA+TGG | + | chr7_1:49179401-49179420 | Msa1022600:CDS | 45.0% | |
| CGTGACACCATGATATACGT+CGG | - | chr7_1:49179411-49179430 | None:intergenic | 45.0% | |
| ACTCGCTCCATGATTATACG+TGG | + | chr7_1:49179438-49179457 | Msa1022600:CDS | 45.0% | |
| GCTCCATGATTATACGTGGA+AGG | + | chr7_1:49179442-49179461 | Msa1022600:CDS | 45.0% | |
| AACTTGAGTGTAGTATCGCG+TGG | + | chr7_1:49179468-49179487 | Msa1022600:intron | 45.0% | |
| TCCTAGAAATGGCCATGGAT+GGG | + | chr7_1:49179535-49179554 | Msa1022600:intron | 45.0% | |
| !! | CATTTTGGGGGTGATGTTGT+CGG | - | chr7_1:49179630-49179649 | None:intergenic | 45.0% |
| !! | ACATAGCTGAGGCATTTTGG+GGG | - | chr7_1:49179642-49179661 | None:intergenic | 45.0% |
| !! | CACATAGCTGAGGCATTTTG+GGG | - | chr7_1:49179643-49179662 | None:intergenic | 45.0% |
| !! | CCACATAGCTGAGGCATTTT+GGG | - | chr7_1:49179644-49179663 | None:intergenic | 45.0% |
| CCAAAATGCCTCAGCTATGT+GGG | + | chr7_1:49179642-49179661 | Msa1022600:intron | 45.0% | |
| AATCCTAAGTTCACTCAGCC+CGG | + | chr7_1:49179729-49179748 | Msa1022600:intron | 45.0% | |
| ATATCAAAAGTCCTGCACCC+GGG | - | chr7_1:49179750-49179769 | None:intergenic | 45.0% | |
| !! | AGTCGCCAGCTGTTTTATCT+TGG | + | chr7_1:49179899-49179918 | Msa1022600:intron | 45.0% |
| AGCAAAACCCTTGAGAATCG+AGG | + | chr7_1:49180002-49180021 | Msa1022600:intron | 45.0% | |
| GCGCGCGTAGAAATTAAAGA+CGG | - | chr7_1:49180094-49180113 | None:intergenic | 45.0% | |
| TTGCCTACGTACCCGATTAA+GGG | + | chr7_1:49180235-49180254 | Msa1022600:intron | 45.0% | |
| GGGCATGATGTAAAGGACAA+TGG | - | chr7_1:49180678-49180697 | None:intergenic | 45.0% | |
| ! | CCTTGGTGTGAGAATTTGCA+AGG | - | chr7_1:49181215-49181234 | None:intergenic | 45.0% |
| CCTTGCAAATTCTCACACCA+AGG | + | chr7_1:49181212-49181231 | Msa1022600:intron | 45.0% | |
| !!! | GACAAGTTTTGGACAGACAG+GGG | + | chr7_1:49181592-49181611 | Msa1022600:intron | 45.0% |
| CACAAGAAATGCTGGGAAAG+GGG | + | chr7_1:49181631-49181650 | Msa1022600:intron | 45.0% | |
| ACAAGAAATGCTGGGAAAGG+GGG | + | chr7_1:49181632-49181651 | Msa1022600:intron | 45.0% | |
| ATAGAAAAAAGGGGCTGGAG+CGG | + | chr7_1:49181693-49181712 | Msa1022600:intron | 45.0% | |
| GTCGGTTGGGTTAAATGCAT+GGG | + | chr7_1:49181741-49181760 | Msa1022600:intron | 45.0% | |
| GATGAGTCTTCCATCTTCTC+CGG | + | chr7_1:49181880-49181899 | Msa1022600:CDS | 45.0% | |
| GTGAAAGTAAGTAACTCCGG+CGG | - | chr7_1:49181958-49181977 | None:intergenic | 45.0% | |
| TCCTCTCCTAAACTCGAATC+CGG | + | chr7_1:49182014-49182033 | Msa1022600:intron | 45.0% | |
| ! | TCGATACCGGATTCGAGTTT+AGG | - | chr7_1:49182023-49182042 | None:intergenic | 45.0% |
| GAAGGAAAGAAAGCAAACGG+AGG | - | chr7_1:49182203-49182222 | None:intergenic | 45.0% | |
| TTACGTCATGCTTCTTGCAC+CGG | + | chr7_1:49182233-49182252 | Msa1022600:CDS | 45.0% | |
| TTGGATGCTTGTACGAACTC+AGG | + | chr7_1:49182257-49182276 | Msa1022600:CDS | 45.0% | |
| AATTCGTCGTTGTACGGTGA+TGG | + | chr7_1:49182428-49182447 | Msa1022600:intron | 45.0% | |
| !! | TTGTGGATTGGTGATGAACG+TGG | + | chr7_1:49182540-49182559 | Msa1022600:CDS | 45.0% |
| !! | TTTGTGGTGGTTGATGATGG+TGG | + | chr7_1:49182596-49182615 | Msa1022600:CDS | 45.0% |
| ! | ATGGTGGAGGAAGGTTGTTA+GGG | + | chr7_1:49182612-49182631 | Msa1022600:intron | 45.0% |
| ! | GGAGGAAGAGAAAGTTGGTT+AGG | + | chr7_1:49182654-49182673 | Msa1022600:intron | 45.0% |
| GTTGGTTAGGGTGATAGAAG+TGG | + | chr7_1:49182667-49182686 | Msa1022600:intron | 45.0% | |
| GGTGATAGAAGTGGTGGTTA+TGG | + | chr7_1:49182676-49182695 | Msa1022600:intron | 45.0% | |
| GATAGAAGTGGTGGTTATGG+AGG | + | chr7_1:49182679-49182698 | Msa1022600:intron | 45.0% | |
| ! | GAGAAAAGTTGGTTAGGGTG+GGG | + | chr7_1:49182704-49182723 | Msa1022600:intron | 45.0% |
| ! | AGAAAAGTTGGTTAGGGTGG+GGG | + | chr7_1:49182705-49182724 | Msa1022600:intron | 45.0% |
| TCACGTGGGAGAAATAGAAG+AGG | + | chr7_1:49182736-49182755 | Msa1022600:intron | 45.0% | |
| CACGTGGGAGAAATAGAAGA+GGG | + | chr7_1:49182737-49182756 | Msa1022600:intron | 45.0% | |
| GAGACAATGCCATGTGTACT+TGG | + | chr7_1:49182865-49182884 | Msa1022600:CDS | 45.0% | |
| GCCATGTGTCCAAATGCTAT+TGG | - | chr7_1:49182913-49182932 | None:intergenic | 45.0% | |
| !! | CGAGTCATTTTAGTCCCTAG+GGG | - | chr7_1:49183120-49183139 | None:intergenic | 45.0% |
| ! | TGAGTCAGTTTTGCCCCTAT+GGG | - | chr7_1:49183277-49183296 | None:intergenic | 45.0% |
| ! | TTGAGTCAGTTTTGCCCCTA+TGG | - | chr7_1:49183278-49183297 | None:intergenic | 45.0% |
| GTAGTGTCTCAAACTCCTAC+AGG | + | chr7_1:49184302-49184321 | Msa1022600:CDS | 45.0% | |
| TCAAACTCCTACAGGTCGTA+TGG | + | chr7_1:49184310-49184329 | Msa1022600:CDS | 45.0% | |
| CAAACTCCTACAGGTCGTAT+GGG | + | chr7_1:49184311-49184330 | Msa1022600:CDS | 45.0% | |
| TCCGGTGAAACTAGGGCTTT+AGG | + | chr7_1:49179341-49179360 | Msa1022600:CDS | 50.0% | |
| CACCATGATATACGTCGGAG+AGG | - | chr7_1:49179406-49179425 | None:intergenic | 50.0% | |
| !! | ATTTCTAGGACGTAGTGCGG+AGG | - | chr7_1:49179525-49179544 | None:intergenic | 50.0% |
| TCCGCACTACGTCCTAGAAA+TGG | + | chr7_1:49179524-49179543 | Msa1022600:intron | 50.0% | |
| !! | GCCATTTCTAGGACGTAGTG+CGG | - | chr7_1:49179528-49179547 | None:intergenic | 50.0% |
| CTACGTCCTAGAAATGGCCA+TGG | + | chr7_1:49179530-49179549 | Msa1022600:intron | 50.0% | |
| GTCCTAGAAATGGCCATGGA+TGG | + | chr7_1:49179534-49179553 | Msa1022600:intron | 50.0% | |
| ACCCATCCATGGCCATTTCT+AGG | - | chr7_1:49179539-49179558 | None:intergenic | 50.0% | |
| ! | GAAATGGCCATGGATGGGTT+TGG | + | chr7_1:49179540-49179559 | Msa1022600:intron | 50.0% |
| CCCAAAATGCCTCAGCTATG+TGG | + | chr7_1:49179641-49179660 | Msa1022600:intron | 50.0% | |
| !! | CCCACATAGCTGAGGCATTT+TGG | - | chr7_1:49179645-49179664 | None:intergenic | 50.0% |
| CGATCAATCCCACATAGCTG+AGG | - | chr7_1:49179653-49179672 | None:intergenic | 50.0% | |
| ATCCTAAGTTCACTCAGCCC+GGG | + | chr7_1:49179730-49179749 | Msa1022600:intron | 50.0% | |
| TAACTCTCGAATCTCCCCAG+TGG | + | chr7_1:49179876-49179895 | Msa1022600:intron | 50.0% | |
| AACCCTTGAGAATCGAGGTC+CGG | + | chr7_1:49180007-49180026 | Msa1022600:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr7_1:49180025-49180044 | Msa1022600:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr7_1:49180030-49180049 | Msa1022600:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr7_1:49180037-49180056 | Msa1022600:intron | 50.0% |
| CTTAATCGGGTACGTAGGCA+AGG | - | chr7_1:49180236-49180255 | None:intergenic | 50.0% | |
| CTTGCCTACGTACCCGATTA+AGG | + | chr7_1:49180234-49180253 | Msa1022600:intron | 50.0% | |
| GATCCCTTAATCGGGTACGT+AGG | - | chr7_1:49180241-49180260 | None:intergenic | 50.0% | |
| TTCCTAATCCCATGCCCTTG+AGG | - | chr7_1:49180353-49180372 | None:intergenic | 50.0% | |
| !! | TCAATGGGGTTTTGACCCCA+AGG | + | chr7_1:49180461-49180480 | Msa1022600:intron | 50.0% |
| AGTGAGGTGTGTGCATGTGT+CGG | + | chr7_1:49180624-49180643 | Msa1022600:intron | 50.0% | |
| CAAGAAATGCTGGGAAAGGG+GGG | + | chr7_1:49181633-49181652 | Msa1022600:intron | 50.0% | |
| AAGAAATGCTGGGAAAGGGG+GGG | + | chr7_1:49181634-49181653 | Msa1022600:intron | 50.0% | |
| TAGAAAAAAGGGGCTGGAGC+GGG | + | chr7_1:49181694-49181713 | Msa1022600:intron | 50.0% | |
| CGACCTAACCCATAACCCAT+GGG | - | chr7_1:49181725-49181744 | None:intergenic | 50.0% | |
| !! | CCATGGGTTATGGGTTAGGT+CGG | + | chr7_1:49181723-49181742 | Msa1022600:intron | 50.0% |
| !! | GGTTATGGGTTAGGTCGGTT+GGG | + | chr7_1:49181728-49181747 | Msa1022600:intron | 50.0% |
| GGTCGGTTGGGTTAAATGCA+TGG | + | chr7_1:49181740-49181759 | Msa1022600:intron | 50.0% | |
| AAAGGGTTCACCGGAGAAGA+TGG | - | chr7_1:49181893-49181912 | None:intergenic | 50.0% | |
| AAAGTAAGTAACTCCGGCGG+CGG | - | chr7_1:49181955-49181974 | None:intergenic | 50.0% | |
| ! | ACCGGATTCGAGTTTAGGAG+AGG | - | chr7_1:49182018-49182037 | None:intergenic | 50.0% |
| CGGTTTCGCCATCTTAACAG+AGG | - | chr7_1:49182116-49182135 | None:intergenic | 50.0% | |
| GATGGCGAAACCGAGCTTAA+AGG | + | chr7_1:49182123-49182142 | Msa1022600:intron | 50.0% | |
| GCGAAACCGAGCTTAAAGGA+CGG | + | chr7_1:49182127-49182146 | Msa1022600:intron | 50.0% | |
| CGAAACCGAGCTTAAAGGAC+GGG | + | chr7_1:49182128-49182147 | Msa1022600:intron | 50.0% | |
| GTTCGTACAAGCATCCAAGC+CGG | - | chr7_1:49182255-49182274 | None:intergenic | 50.0% | |
| GTTTGGAGGCAAACTCGTTC+TGG | + | chr7_1:49182307-49182326 | Msa1022600:CDS | 50.0% | |
| !! | CGTTGTACGGTGATGGATTG+CGG | + | chr7_1:49182435-49182454 | Msa1022600:intron | 50.0% |
| !! | TGGATTGGTGATGAACGTGG+TGG | + | chr7_1:49182543-49182562 | Msa1022600:CDS | 50.0% |
| !! | TGGTTGATGATGGTGGAGGA+AGG | + | chr7_1:49182603-49182622 | Msa1022600:CDS | 50.0% |
| !! | GATGGTGGAGGAAGGTTGTT+AGG | + | chr7_1:49182611-49182630 | Msa1022600:intron | 50.0% |
| GGTTAGGGTGATAGAAGTGG+TGG | + | chr7_1:49182670-49182689 | Msa1022600:intron | 50.0% | |
| TGGGGGAAGAAATGTCACGT+GGG | + | chr7_1:49182722-49182741 | Msa1022600:intron | 50.0% | |
| !! | TAGGTGATGAAAGGGGTGCT+TGG | + | chr7_1:49182836-49182855 | Msa1022600:intron | 50.0% |
| GCATTTGGACACATGGCACT+TGG | + | chr7_1:49182916-49182935 | Msa1022600:intron | 50.0% | |
| AAACGACCAAAACGCCCCTA+GGG | + | chr7_1:49183103-49183122 | Msa1022600:intron | 50.0% | |
| !!! | TTTAGTCCCTAGGGGCGTTT+TGG | - | chr7_1:49183112-49183131 | None:intergenic | 50.0% |
| CCAGTGATATGTGATGCAGC+TGG | - | chr7_1:49184380-49184399 | None:intergenic | 50.0% | |
| CCAGCTGCATCACATATCAC+TGG | + | chr7_1:49184377-49184396 | Msa1022600:CDS | 50.0% | |
| CAAAGTCGAGGAGTCATGGG+TGG | + | chr7_1:49179310-49179329 | Msa1022600:CDS | 55.0% | |
| CGTCGGAGAGGTTGCAACTT+GGG | - | chr7_1:49179394-49179413 | None:intergenic | 55.0% | |
| ACGTCGGAGAGGTTGCAACT+TGG | - | chr7_1:49179395-49179414 | None:intergenic | 55.0% | |
| AAACAGCTGGCGACTCCACT+GGG | - | chr7_1:49179894-49179913 | None:intergenic | 55.0% | |
| AAAACAGCTGGCGACTCCAC+TGG | - | chr7_1:49179895-49179914 | None:intergenic | 55.0% | |
| ACCCTTGAGAATCGAGGTCC+GGG | + | chr7_1:49180008-49180027 | Msa1022600:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | chr7_1:49180012-49180031 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr7_1:49180029-49180048 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr7_1:49180026-49180045 | Msa1022600:intron | 55.0% |
| AGAAAGAGGCCTCAAGGGCA+TGG | + | chr7_1:49180341-49180360 | Msa1022600:intron | 55.0% | |
| ! | GAAAGAGGCCTCAAGGGCAT+GGG | + | chr7_1:49180342-49180361 | Msa1022600:intron | 55.0% |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | + | chr7_1:49180636-49180655 | Msa1022600:intron | 55.0% |
| AGAAATGCTGGGAAAGGGGG+GGG | + | chr7_1:49181635-49181654 | Msa1022600:intron | 55.0% | |
| ! | GGGGGGTGTACATAGCATAC+TGG | + | chr7_1:49181653-49181672 | Msa1022600:intron | 55.0% |
| ! | GGGTTGCACCCATGGGTTAT+GGG | + | chr7_1:49181714-49181733 | Msa1022600:intron | 55.0% |
| ! | GCACCCATGGGTTATGGGTT+AGG | + | chr7_1:49181719-49181738 | Msa1022600:intron | 55.0% |
| CCGACCTAACCCATAACCCA+TGG | - | chr7_1:49181726-49181745 | None:intergenic | 55.0% | |
| !! | GGGTTATGGGTTAGGTCGGT+TGG | + | chr7_1:49181727-49181746 | Msa1022600:intron | 55.0% |
| TCCGGTGAACCCTTTCACTC+CGG | + | chr7_1:49181898-49181917 | Msa1022600:CDS | 55.0% | |
| !! | TCATGCTTCTTGCACCGGCT+TGG | + | chr7_1:49182238-49182257 | Msa1022600:CDS | 55.0% |
| !! | TGTACGGTGATGGATTGCGG+TGG | + | chr7_1:49182438-49182457 | Msa1022600:intron | 55.0% |
| !! | GTGGTGGTTGATGATGGTGG+AGG | + | chr7_1:49182599-49182618 | Msa1022600:CDS | 55.0% |
| GTGGAGGAAGGTTGTTAGGG+AGG | + | chr7_1:49182615-49182634 | Msa1022600:intron | 55.0% | |
| GAGGAAGGTTGTTAGGGAGG+TGG | + | chr7_1:49182618-49182637 | Msa1022600:intron | 55.0% | |
| GGTTGTTAGGGAGGTGGAAG+TGG | + | chr7_1:49182624-49182643 | Msa1022600:intron | 55.0% | |
| TGTTAGGGAGGTGGAAGTGG+TGG | + | chr7_1:49182627-49182646 | Msa1022600:intron | 55.0% | |
| GGAGGTGGAAGTGGTGGTTA+TGG | + | chr7_1:49182633-49182652 | Msa1022600:intron | 55.0% | |
| GGTGGAAGTGGTGGTTATGG+AGG | + | chr7_1:49182636-49182655 | Msa1022600:intron | 55.0% | |
| GTGGGGGAAGAAATGTCACG+TGG | + | chr7_1:49182721-49182740 | Msa1022600:intron | 55.0% | |
| GAAACGACCAAAACGCCCCT+AGG | + | chr7_1:49183102-49183121 | Msa1022600:intron | 55.0% | |
| GTCTCTCCCATACGACCTGT+AGG | - | chr7_1:49184320-49184339 | None:intergenic | 55.0% | |
| CGAGGAGTCATGGGTGGACA+CGG | + | chr7_1:49179316-49179335 | Msa1022600:CDS | 60.0% | |
| ACACGGCGTCCGGTGAAACT+AGG | + | chr7_1:49179333-49179352 | Msa1022600:CDS | 60.0% | |
| CACGGCGTCCGGTGAAACTA+GGG | + | chr7_1:49179334-49179353 | Msa1022600:CDS | 60.0% | |
| CCAAAACACGAGGCAACCCC+CGG | + | chr7_1:49179679-49179698 | Msa1022600:intron | 60.0% | |
| CACCCGGGCTGAGTGAACTT+AGG | - | chr7_1:49179735-49179754 | None:intergenic | 60.0% | |
| AACAGCTGGCGACTCCACTG+GGG | - | chr7_1:49179893-49179912 | None:intergenic | 60.0% | |
| CTCCCGGACCTCGATTCTCA+AGG | - | chr7_1:49180013-49180032 | None:intergenic | 60.0% | |
| ! | GGCCTCAAGGGCATGGGATT+AGG | + | chr7_1:49180348-49180367 | Msa1022600:intron | 60.0% |
| GAAATGCTGGGAAAGGGGGG+GGG | + | chr7_1:49181636-49181655 | Msa1022600:intron | 60.0% | |
| ! | CGGGTTGCACCCATGGGTTA+TGG | + | chr7_1:49181713-49181732 | Msa1022600:intron | 60.0% |
| GCCGGAGTGAAAGGGTTCAC+CGG | - | chr7_1:49181902-49181921 | None:intergenic | 60.0% | |
| TGAACCCTTTCACTCCGGCG+CGG | + | chr7_1:49181903-49181922 | Msa1022600:CDS | 60.0% | |
| TCATGGGTGGACACGGCGTC+CGG | + | chr7_1:49179323-49179342 | Msa1022600:CDS | 65.0% | |
| CGGCGCGTGTTGTCGCGTTT+AGG | - | chr7_1:49179610-49179629 | None:intergenic | 65.0% | |
| ! | CCGGGGGTTGCCTCGTGTTT+TGG | - | chr7_1:49179682-49179701 | None:intergenic | 65.0% |
| AGTTCACTCAGCCCGGGTGC+AGG | + | chr7_1:49179736-49179755 | Msa1022600:intron | 65.0% | |
| !! | CTGGAGCGGGTTGCACCCAT+GGG | + | chr7_1:49181707-49181726 | Msa1022600:intron | 65.0% |
| !! | GCTGGAGCGGGTTGCACCCA+TGG | + | chr7_1:49181706-49181725 | Msa1022600:intron | 70.0% |
| ACCCTTTCACTCCGGCGCGG+TGG | + | chr7_1:49181906-49181925 | Msa1022600:CDS | 70.0% | |
| GCCACCGCGCCGGAGTGAAA+GGG | - | chr7_1:49181910-49181929 | None:intergenic | 70.0% | |
| TTTCACTCCGGCGCGGTGGC+CGG | + | chr7_1:49181910-49181929 | Msa1022600:CDS | 70.0% | |
| GGTGGCCGGCCACCCTAAAG+TGG | + | chr7_1:49181924-49181943 | Msa1022600:CDS | 70.0% | |
| GGCCGGCCACCCTAAAGTGG+CGG | + | chr7_1:49181927-49181946 | Msa1022600:CDS | 70.0% | |
| !! | CGCCGCCACTTTAGGGTGGC+CGG | - | chr7_1:49181932-49181951 | None:intergenic | 70.0% |
| GGCCACCGCGCCGGAGTGAA+AGG | - | chr7_1:49181911-49181930 | None:intergenic | 75.0% | |
| ! | GCGGCGCCGCCACTTTAGGG+TGG | - | chr7_1:49181936-49181955 | None:intergenic | 75.0% |
| ! | GCGGCGGCGCCGCCACTTTA+GGG | - | chr7_1:49181939-49181958 | None:intergenic | 75.0% |
| TAAAGTGGCGGCGCCGCCGC+CGG | + | chr7_1:49181939-49181958 | Msa1022600:CDS | 75.0% | |
| !! | GGCGGCGGCGCCGCCACTTT+AGG | - | chr7_1:49181940-49181959 | None:intergenic | 80.0% |
| ! | AGGGTGGCCGGCCACCGCGC+CGG | - | chr7_1:49181920-49181939 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 49179263 | 49184436 | 49179263 | ID=Msa1022600;Name=Msa1022600 |
| chr7_1 | mRNA | 49179263 | 49184436 | 49179263 | ID=Msa1022600-mRNA-1;Parent=Msa1022600;Name=Msa1022600-mRNA-1;_AED=0.84;_eAED=0.84;_QI=0|0|0|0.16|1|1|6|0|273 |
| chr7_1 | exon | 49179263 | 49179463 | 49179263 | ID=Msa1022600-mRNA-1:exon:9633;Parent=Msa1022600-mRNA-1 |
| chr7_1 | exon | 49181874 | 49181962 | 49181874 | ID=Msa1022600-mRNA-1:exon:9634;Parent=Msa1022600-mRNA-1 |
| chr7_1 | exon | 49182190 | 49182400 | 49182190 | ID=Msa1022600-mRNA-1:exon:9635;Parent=Msa1022600-mRNA-1 |
| chr7_1 | exon | 49182528 | 49182624 | 49182528 | ID=Msa1022600-mRNA-1:exon:9636;Parent=Msa1022600-mRNA-1 |
| chr7_1 | exon | 49182839 | 49182891 | 49182839 | ID=Msa1022600-mRNA-1:exon:9637;Parent=Msa1022600-mRNA-1 |
| chr7_1 | exon | 49184266 | 49184436 | 49184266 | ID=Msa1022600-mRNA-1:exon:9638;Parent=Msa1022600-mRNA-1 |
| chr7_1 | CDS | 49179263 | 49179463 | 49179263 | ID=Msa1022600-mRNA-1:cds;Parent=Msa1022600-mRNA-1 |
| chr7_1 | CDS | 49181874 | 49181962 | 49181874 | ID=Msa1022600-mRNA-1:cds;Parent=Msa1022600-mRNA-1 |
| chr7_1 | CDS | 49182190 | 49182400 | 49182190 | ID=Msa1022600-mRNA-1:cds;Parent=Msa1022600-mRNA-1 |
| chr7_1 | CDS | 49182528 | 49182624 | 49182528 | ID=Msa1022600-mRNA-1:cds;Parent=Msa1022600-mRNA-1 |
| chr7_1 | CDS | 49182839 | 49182891 | 49182839 | ID=Msa1022600-mRNA-1:cds;Parent=Msa1022600-mRNA-1 |
| chr7_1 | CDS | 49184266 | 49184436 | 49184266 | ID=Msa1022600-mRNA-1:cds;Parent=Msa1022600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
