AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1106760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106760 MtrunA17_Chr7g0239451 95.489 266 12 0 1 266 1 266 0.0 530
Msa1106760 MtrunA17_Chr7g0239511 76.604 265 62 0 1 265 1 265 9.26e-151 421
Msa1106760 MtrunA17_Chr7g0239501 75.472 265 65 0 1 265 1 265 2.97e-146 410
Msa1106760 MtrunA17_Chr7g0239491 69.173 266 80 2 1 266 1 264 3.69e-137 387
Msa1106760 MtrunA17_Chr7g0239481 71.591 264 74 1 1 264 1 263 4.64e-136 384
Msa1106760 MtrunA17_Chr7g0239461 71.805 266 25 2 1 266 1 216 1.31e-132 373
Msa1106760 MtrunA17_Chr3g0112151 59.316 263 103 1 3 265 73 331 7.95e-108 315
Msa1106760 MtrunA17_Chr4g0032141 57.752 258 99 2 11 265 51 301 1.14e-106 311
Msa1106760 MtrunA17_Chr3g0112261 55.598 259 111 1 7 265 10 264 1.30e-101 297
Msa1106760 MtrunA17_Chr3g0112141 58.566 251 100 1 16 266 17 263 9.78e-101 295
Msa1106760 MtrunA17_Chr3g0112171 58.000 250 101 1 16 265 15 260 1.54e-100 294
Msa1106760 MtrunA17_Chr3g0112271 55.336 253 109 1 13 265 14 262 5.26e-99 290
Msa1106760 MtrunA17_Chr4g0032181 54.468 235 101 2 32 265 17 246 8.90e-89 264
Msa1106760 MtrunA17_Chr4g0075531 34.483 261 150 7 12 266 5 250 4.78e-32 118
Msa1106760 MtrunA17_Chr4g0074511 31.907 257 159 6 16 263 40 289 3.02e-28 109
Msa1106760 MtrunA17_Chr0c30g0494101 32.558 258 154 8 16 263 40 287 5.25e-28 108
Msa1106760 MtrunA17_Chr7g0259521 32.422 256 159 6 16 264 6 254 3.68e-27 105
Msa1106760 MtrunA17_Chr7g0259531 32.184 261 153 8 16 264 11 259 9.66e-25 99.4
Msa1106760 MtrunA17_Chr1g0182511 32.308 260 155 6 16 264 14 263 1.25e-24 99.4
Msa1106760 MtrunA17_Chr7g0272961 31.518 257 159 8 16 263 40 288 4.25e-24 98.2
Msa1106760 MtrunA17_Chr8g0357481 28.137 263 162 6 16 263 14 264 2.85e-23 96.3
Msa1106760 MtrunA17_Chr1g0191751 30.739 257 161 8 16 263 101 349 4.14e-23 96.7
Msa1106760 MtrunA17_Chr3g0122901 30.242 248 156 5 22 263 81 317 3.17e-21 90.9
Msa1106760 MtrunA17_Chr7g0249571 29.268 205 141 4 4 204 26 230 1.35e-19 86.7
Msa1106760 MtrunA17_Chr4g0028911 26.357 258 177 7 16 265 11 263 5.20e-19 84.0
Msa1106760 MtrunA17_Chr4g0028921 26.848 257 177 6 16 265 11 263 7.11e-19 84.0
Msa1106760 MtrunA17_Chr3g0112321 45.631 103 36 3 148 247 2 87 9.10e-19 79.0
Msa1106760 MtrunA17_Chr6g0459351 28.916 249 167 7 21 264 18 261 2.65e-16 76.6
Msa1106760 MtrunA17_Chr4g0026001 28.727 275 169 11 1 265 1 258 1.06e-15 75.1
Msa1106760 MtrunA17_Chr4g0044131 27.308 260 169 7 16 266 8 256 2.66e-15 73.9
Msa1106760 MtrunA17_Chr6g0459281 27.675 271 179 9 1 264 1 261 3.41e-15 73.6
Msa1106760 MtrunA17_Chr7g0244061 29.474 285 173 9 3 266 18 295 5.94e-15 73.2
Msa1106760 MtrunA17_Chr8g0355281 27.638 199 134 5 16 205 69 266 9.35e-15 73.2
Msa1106760 MtrunA17_Chr6g0459301 28.623 276 171 10 1 264 1 262 1.00e-14 72.0
Msa1106760 MtrunA17_Chr7g0252031 27.863 262 170 8 16 266 35 288 1.54e-14 72.0
Msa1106760 MtrunA17_Chr4g0040371 27.547 265 167 5 16 266 19 272 1.95e-13 68.6
Msa1106760 MtrunA17_Chr7g0268591 28.185 259 172 6 16 266 33 285 5.60e-13 67.4
Msa1106760 MtrunA17_Chr3g0084871 29.885 261 166 6 16 265 16 270 7.16e-13 67.0
Msa1106760 MtrunA17_Chr4g0025981 26.210 248 172 6 18 262 43 282 7.25e-13 67.4
Msa1106760 MtrunA17_Chr4g0044111 26.437 261 186 4 7 265 4 260 7.39e-13 67.0
Msa1106760 MtrunA17_Chr7g0266981 26.437 261 186 4 7 265 4 260 7.68e-13 67.0
Msa1106760 MtrunA17_Chr4g0025971 26.378 254 174 6 16 265 14 258 1.01e-12 66.6
Msa1106760 MtrunA17_Chr7g0267011 27.660 188 131 3 16 201 8 192 4.30e-12 63.5
Msa1106760 MtrunA17_Chr7g0267001 25.197 254 164 6 16 266 8 238 8.98e-12 63.5
Msa1106760 MtrunA17_Chr6g0466681 29.651 172 107 5 18 181 66 231 1.34e-11 63.9
Msa1106760 MtrunA17_Chr7g0247041 28.295 258 109 8 21 209 8 258 3.26e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106760 AT5G06060.1 58.039 255 103 1 11 265 4 254 2.27e-106 309
Msa1106760 AT1G07440.1 57.031 256 105 3 10 265 6 256 8.35e-103 300
Msa1106760 AT2G29260.1 54.167 264 117 1 2 265 54 313 7.04e-101 297
Msa1106760 AT2G29320.1 58.238 261 95 5 11 265 7 259 1.73e-100 294
Msa1106760 AT2G29290.2 55.686 255 109 1 11 265 2 252 4.44e-100 293
Msa1106760 AT2G29300.1 57.308 260 98 4 11 265 2 253 2.85e-99 291
Msa1106760 AT2G29300.2 57.308 260 98 4 11 265 2 253 9.91e-99 290
Msa1106760 AT2G29350.1 57.031 256 105 2 10 265 9 259 2.62e-98 289
Msa1106760 AT2G29340.2 55.686 255 109 2 11 265 2 252 6.98e-98 287
Msa1106760 AT2G29310.1 56.078 255 108 2 11 265 2 252 1.24e-97 287
Msa1106760 AT2G29340.1 55.686 255 109 2 11 265 2 252 1.59e-97 288
Msa1106760 AT2G29150.1 55.894 263 111 3 1 263 1 258 4.24e-97 286
Msa1106760 AT2G29360.1 54.682 267 113 5 1 265 1 261 1.66e-96 284
Msa1106760 AT2G30670.1 53.516 256 113 2 11 265 2 252 7.00e-95 280
Msa1106760 AT2G29330.1 54.118 255 113 2 11 265 2 252 1.38e-94 279
Msa1106760 AT1G07450.1 54.331 254 111 3 12 265 4 252 1.25e-93 276
Msa1106760 AT2G29370.1 53.846 260 113 3 8 265 7 261 1.16e-92 275
Msa1106760 AT2G29320.2 56.904 239 90 4 32 265 11 241 9.66e-89 264
Msa1106760 AT2G29290.1 53.648 233 104 1 33 265 7 235 1.25e-85 256
Msa1106760 AT2G29310.2 54.274 234 103 2 32 265 21 250 1.00e-83 251
Msa1106760 AT2G29350.3 55.556 225 95 2 41 265 2 221 7.67e-82 246
Msa1106760 AT2G29320.3 59.512 205 73 4 11 209 7 207 1.96e-79 239
Msa1106760 AT2G29340.3 55.224 201 90 0 11 211 2 202 1.21e-77 234
Msa1106760 AT2G29340.4 55.224 201 90 0 11 211 2 202 1.21e-77 234
Msa1106760 AT2G29350.2 57.000 200 86 0 10 209 9 208 1.25e-77 234
Msa1106760 AT2G29310.3 56.500 200 87 0 11 210 2 201 2.99e-77 233
Msa1106760 AT1G07440.2 55.030 169 76 0 10 178 6 174 2.52e-63 196
Msa1106760 AT2G29310.4 54.190 179 82 0 32 210 21 199 5.26e-63 196
Msa1106760 AT2G29170.1 63.542 96 34 1 8 102 7 102 1.98e-39 133
Msa1106760 AT3G03980.1 33.704 270 162 4 7 264 5 269 4.90e-35 127
Msa1106760 AT4G05530.1 34.127 252 157 6 16 266 9 252 1.64e-31 117
Msa1106760 AT5G18210.1 33.205 259 158 5 15 264 7 259 2.79e-31 117
Msa1106760 AT3G05260.1 35.547 256 149 7 16 263 37 284 3.40e-29 112
Msa1106760 AT1G54870.1 33.074 257 155 8 16 263 82 330 3.80e-28 110
Msa1106760 AT1G54870.2 33.074 257 155 8 16 263 84 332 4.18e-28 110
Msa1106760 AT5G18210.2 33.750 240 144 5 15 245 7 240 8.73e-28 108
Msa1106760 AT4G13180.1 32.422 256 159 5 16 264 13 261 2.28e-26 103
Msa1106760 AT3G04000.1 32.963 270 163 4 7 263 5 269 3.03e-25 101
Msa1106760 AT1G24360.1 32.411 253 144 9 22 263 80 316 7.37e-24 98.6
Msa1106760 AT3G12800.1 27.376 263 165 5 16 263 10 261 5.47e-23 95.9
Msa1106760 AT3G03330.1 29.949 197 133 3 12 203 37 233 1.16e-18 84.3
Msa1106760 AT3G55310.1 25.769 260 176 7 16 265 17 269 1.62e-17 80.5
Msa1106760 AT3G55290.2 26.236 263 171 8 16 265 17 269 1.83e-17 80.5
Msa1106760 AT3G55290.1 26.236 263 171 8 16 265 18 270 1.97e-17 80.1
Msa1106760 AT3G46170.1 26.641 259 175 9 16 265 26 278 3.22e-17 79.7
Msa1106760 AT1G63380.3 25.097 259 180 9 16 265 15 268 7.50e-17 78.6
Msa1106760 AT1G63380.1 25.097 259 180 9 16 265 17 270 8.25e-17 78.6
Msa1106760 AT1G63380.4 25.097 259 180 9 16 265 19 272 8.28e-17 78.6
Msa1106760 AT1G63380.2 25.097 259 180 9 16 265 22 275 9.78e-17 78.6
Msa1106760 AT1G62610.3 23.552 259 184 7 16 265 15 268 1.60e-15 75.1
Msa1106760 AT1G62610.4 23.552 259 184 7 16 265 19 272 1.74e-15 74.7
Msa1106760 AT1G62610.1 23.552 259 184 7 16 265 14 267 1.76e-15 74.7
Msa1106760 AT1G62610.2 23.552 259 184 7 16 265 13 266 1.96e-15 74.7
Msa1106760 AT3G42960.1 27.675 271 168 8 11 266 5 262 2.26e-15 74.3
Msa1106760 AT2G17845.1 24.621 264 173 8 16 263 47 300 3.10e-15 74.7
Msa1106760 AT3G51680.1 28.723 282 180 9 1 266 20 296 1.09e-14 72.8
Msa1106760 AT5G04900.1 27.604 192 130 5 22 205 83 273 1.25e-14 73.2
Msa1106760 AT3G26760.1 26.616 263 172 7 16 265 36 290 2.77e-14 71.6
Msa1106760 AT1G49670.1 31.250 224 130 10 18 225 6 221 3.83e-14 72.4
Msa1106760 AT1G49670.2 31.250 224 130 10 18 225 6 221 3.92e-14 72.4
Msa1106760 AT2G47130.1 28.571 259 164 9 16 265 6 252 2.36e-13 68.6
Msa1106760 AT5G50590.2 29.167 192 125 6 16 202 45 230 4.81e-13 67.4
Msa1106760 AT5G50690.2 29.167 192 125 6 16 202 45 230 4.81e-13 67.4
Msa1106760 AT3G47350.1 28.866 194 127 6 18 206 46 233 5.25e-13 68.2
Msa1106760 AT3G47350.2 28.866 194 127 6 18 206 46 233 6.13e-13 68.2
Msa1106760 AT5G50590.1 30.286 175 112 5 16 185 45 214 6.49e-13 67.8
Msa1106760 AT5G50690.1 30.286 175 112 5 16 185 45 214 6.49e-13 67.8
Msa1106760 AT3G03350.2 31.169 154 97 3 51 203 207 352 7.97e-13 68.2
Msa1106760 AT4G13250.1 24.670 227 147 5 22 228 165 387 1.30e-12 67.8
Msa1106760 AT4G03140.1 25.769 260 177 7 16 266 78 330 1.25e-11 64.3
Msa1106760 AT1G67730.1 28.505 214 136 6 17 217 50 259 1.51e-11 63.9
Msa1106760 AT3G59710.3 34.307 137 81 4 13 145 13 144 3.00e-11 62.8
Msa1106760 AT2G47140.1 27.099 262 165 8 16 265 6 253 3.72e-11 62.4
Msa1106760 AT3G59710.2 34.307 137 81 4 13 145 42 173 4.34e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCAATACTTATTTAATTA+AGG 0.138846 7_3:+47332824 Msa1106760:three_prime_UTR
ATCTTCTTCATCCATAAATT+TGG 0.149081 7_3:+47332156 Msa1106760:three_prime_UTR
GTTGAAGAGTTAGCTGAATT+TGG 0.164853 7_3:+47329699 Msa1106760:CDS
TTTCTTGTGTTTGGACTATT+TGG 0.213432 7_3:-47332666 None:intergenic
CCATTCTAATGCCAAGTTCT+TGG 0.242739 7_3:-47331063 None:intergenic
GTGTTTACTTCTTCCGTTGC+AGG 0.266264 7_3:+47330883 Msa1106760:CDS
AGAAAAGTATTTGTTATATC+AGG 0.268806 7_3:+47332409 Msa1106760:three_prime_UTR
CTTCTAAAGGAATCTGGATA+TGG 0.270015 7_3:+47330853 Msa1106760:CDS
TCCAATACTTATTTAATTAA+GGG 0.321367 7_3:+47332825 Msa1106760:three_prime_UTR
AGCAAGGGATTTAATGTAAC+AGG 0.352537 7_3:+47329786 Msa1106760:CDS
ACCCTTAATTAAATAAGTAT+TGG 0.370642 7_3:-47332826 None:intergenic
TGTCTTGTAACTACGTTGTT+TGG 0.378196 7_3:+47332291 Msa1106760:three_prime_UTR
ATTGTTTCTTCTATCTTTCA+AGG 0.382915 7_3:+47329858 Msa1106760:CDS
AGAAGATATTAATAAATGTT+TGG 0.384019 7_3:+47329752 Msa1106760:CDS
TCCGAAAGTGATGTCTTAAC+AGG 0.388653 7_3:-47331125 None:intergenic
CGAGATTAAGCCACCACATA+TGG 0.395264 7_3:+47332528 Msa1106760:three_prime_UTR
CACCCACTTCTAAAGGAATC+TGG 0.397044 7_3:+47330847 Msa1106760:CDS
TGTGACACTTAATTTCTTGT+TGG 0.404925 7_3:-47332435 None:intergenic
TTAATAAATGTTTGGAAGAG+TGG 0.412448 7_3:+47329760 Msa1106760:CDS
ACCTGTTAAGACATCACTTT+CGG 0.414846 7_3:+47331124 Msa1106760:CDS
GCTTCCTTAACATGTGCCTC+AGG 0.419216 7_3:-47332865 None:intergenic
TGTCCCTGAGGCACATGTTA+AGG 0.423121 7_3:+47332861 Msa1106760:three_prime_UTR
CCAAGAACTTGGCATTAGAA+TGG 0.430035 7_3:+47331063 Msa1106760:CDS
TCTGTTTATGCTGCCACTAA+AGG 0.430275 7_3:+47330928 Msa1106760:CDS
AAGAAGATAAAGGAGATAGA+AGG 0.433354 7_3:-47332141 None:intergenic
TGAACAACGCAAGAAACTAA+TGG 0.437497 7_3:+47329833 Msa1106760:CDS
ACAGGTGGAACCCGTGGCAT+TGG 0.442684 7_3:+47329441 Msa1106760:CDS
AGCTATAGCTTTATACCCTT+CGG 0.447532 7_3:-47331948 None:intergenic
CGTGCAAATGCTGTGGCACC+TGG 0.452656 7_3:+47331101 Msa1106760:CDS
TTTATGGATGAAGAAGATAA+AGG 0.461769 7_3:-47332151 None:intergenic
GAATCAATTCACCAAGAACT+TGG 0.462001 7_3:+47331052 Msa1106760:CDS
GCAGCATAAACAGATAAAAC+AGG 0.469195 7_3:-47330919 None:intergenic
GGACAAATAATAGCTATTGA+TGG 0.472475 7_3:+47332070 Msa1106760:CDS
CAGGTGGAACCCGTGGCATT+GGG 0.482263 7_3:+47329442 Msa1106760:CDS
TCAAACTCCTACAGGTCGTA+TGG 0.485964 7_3:+47331982 Msa1106760:CDS
GAAGATATATCAACTACATT+GGG 0.486365 7_3:+47330784 Msa1106760:CDS
AAATCATGGATGATGAAGAA+AGG 0.490737 7_3:-47332237 None:intergenic
GCTTTCTATTAATCAACTTG+TGG 0.497241 7_3:-47332615 None:intergenic
GTAGTGTCTCAAACTCCTAC+AGG 0.497877 7_3:+47331974 Msa1106760:CDS
ACTTGCACACCCACTTCTAA+AGG 0.498917 7_3:+47330840 Msa1106760:CDS
CAAGAACTTGGCATTAGAAT+GGG 0.500423 7_3:+47331064 Msa1106760:CDS
AATCATGGATGATGAAGAAA+GGG 0.501258 7_3:-47332236 None:intergenic
TGAAGATATATCAACTACAT+TGG 0.504873 7_3:+47330783 Msa1106760:CDS
AGTGATGTCTTAACAGGTCC+AGG 0.505141 7_3:-47331119 None:intergenic
TTCTAAAGGAATCTGGATAT+GGG 0.510619 7_3:+47330854 Msa1106760:CDS
GCACTCAAACGACAAAATCA+TGG 0.519879 7_3:-47332251 None:intergenic
ATGACAGTTTCCAACAAAAG+TGG 0.520166 7_3:-47332637 None:intergenic
ATCACTTTCGGAATCAATCA+TGG 0.531450 7_3:+47331136 Msa1106760:CDS
CTTAGTCTCTCAAGCACAAG+AGG 0.532219 7_3:+47332370 Msa1106760:three_prime_UTR
TTACAGGATTATGACTCCGA+AGG 0.544242 7_3:+47331932 Msa1106760:intron
TATCCAGATTCCTTTAGAAG+TGG 0.549645 7_3:-47330850 None:intergenic
ATCCAGATTCCTTTAGAAGT+GGG 0.552090 7_3:-47330849 None:intergenic
AACAAAGTTAAGCAGCATCA+AGG 0.560242 7_3:+47329380 Msa1106760:CDS
TTGAGAAGCCACCTACTGAT+CGG 0.563261 7_3:+47332720 Msa1106760:three_prime_UTR
CTTCCTTAACATGTGCCTCA+GGG 0.566055 7_3:-47332864 None:intergenic
GCAGCATCAAGGATAAAAGA+TGG 0.570695 7_3:+47329391 Msa1106760:CDS
GAAGGGTATAAAGCTATAGC+TGG 0.570914 7_3:+47331950 Msa1106760:CDS
CCAGCTGCATCACATATCAC+TGG 0.576865 7_3:+47332049 Msa1106760:CDS
GAAGAAAGGGAAAAGAGAGA+AGG 0.579791 7_3:-47332223 None:intergenic
GATAAAAGATGGTCACTACA+TGG 0.585575 7_3:+47329402 Msa1106760:CDS
TTTGGAAGAGTGGAAAAGCA+AGG 0.587401 7_3:+47329770 Msa1106760:CDS
TTGGAAGAGTGGAAAAGCAA+GGG 0.587834 7_3:+47329771 Msa1106760:CDS
AGGAAATTACCCAATGCCAC+GGG 0.590532 7_3:-47329451 None:intergenic
CAAACTCCTACAGGTCGTAT+GGG 0.597780 7_3:+47331983 Msa1106760:CDS
TACAGGATTATGACTCCGAA+GGG 0.604075 7_3:+47331933 Msa1106760:intron
AAGGAAATTACCCAATGCCA+CGG 0.607902 7_3:-47329452 None:intergenic
GGTATGACTGCGATAGTGAC+AGG 0.612583 7_3:+47329423 Msa1106760:CDS
ACTACAATATTCCGATCAGT+AGG 0.619922 7_3:-47332731 None:intergenic
CTTGGCATTAGAATGGGCAA+AGG 0.624391 7_3:+47331070 Msa1106760:CDS
CCAGTGATATGTGATGCAGC+TGG 0.625792 7_3:-47332049 None:intergenic
AACATGTGCCTCAGGGACAA+CGG 0.642021 7_3:-47332857 None:intergenic
CAAATAATAGCTATTGATGG+AGG 0.647210 7_3:+47332073 Msa1106760:CDS
GGTGTGCAAGTTGACACAAA+TGG 0.648867 7_3:-47330828 None:intergenic
TAATATTCGTGCAAATGCTG+TGG 0.649939 7_3:+47331094 Msa1106760:CDS
ATAGTGACAGGTGGAACCCG+TGG 0.650350 7_3:+47329435 Msa1106760:CDS
ACAATATTCCGATCAGTAGG+TGG 0.652096 7_3:-47332728 None:intergenic
GTCTCTCCCATACGACCTGT+AGG 0.653589 7_3:-47331989 None:intergenic
AATGTTAACCGTTGTCCCTG+AGG 0.658229 7_3:+47332849 Msa1106760:three_prime_UTR
GTAGTTATCAACTAGAAACA+TGG 0.666186 7_3:+47329353 Msa1106760:exon
ATGACTGCGATAGTGACAGG+TGG 0.740029 7_3:+47329426 Msa1106760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAAATCAATTTAAA+AGG - chr7_3:47329525-47329544 None:intergenic 10.0%
!!! ATAAAGTTGTTTTTTTTTAA+AGG - chr7_3:47329627-47329646 None:intergenic 10.0%
!!! ATATAATTTTATTTTTTGAC+AGG + chr7_3:47329954-47329973 Msa1106760:intron 10.0%
!!! TATAATTTTATTTTTTGACA+GGG + chr7_3:47329955-47329974 Msa1106760:intron 10.0%
!! GAAAAACTAAAAAATTTATA+CGG + chr7_3:47330416-47330435 Msa1106760:intron 10.0%
!! CTAATTTAATATGTTATACA+TGG + chr7_3:47329565-47329584 Msa1106760:intron 15.0%
!! AGAAGATATTAATAAATGTT+TGG + chr7_3:47329752-47329771 Msa1106760:CDS 15.0%
!!! AAAATTATATACATGTTTTG+AGG - chr7_3:47329944-47329963 None:intergenic 15.0%
!!! TTGTTTATTTTGTTCTTTTT+TGG - chr7_3:47330113-47330132 None:intergenic 15.0%
!! TATTTATTATCCAAGAAATT+GGG - chr7_3:47330294-47330313 None:intergenic 15.0%
!! ATATTTATTATCCAAGAAAT+TGG - chr7_3:47330295-47330314 None:intergenic 15.0%
!! TATAGAAATCTTTGTATATA+AGG + chr7_3:47330447-47330466 Msa1106760:intron 15.0%
!! ATAGAAATCTTTGTATATAA+GGG + chr7_3:47330448-47330467 Msa1106760:intron 15.0%
!!! TAAAAAAAATTTTACGAAAG+GGG - chr7_3:47330606-47330625 None:intergenic 15.0%
!!! CTAAAAAAAATTTTACGAAA+GGG - chr7_3:47330607-47330626 None:intergenic 15.0%
!!! CTTTCGTAAAATTTTTTTTA+GGG + chr7_3:47330606-47330625 Msa1106760:intron 15.0%
!! TTATATATTGTCAAAAAACA+GGG - chr7_3:47330688-47330707 None:intergenic 15.0%
!! ATTATATATTGTCAAAAAAC+AGG - chr7_3:47330689-47330708 None:intergenic 15.0%
!!! ATATAATGTTACCTTATTTT+AGG + chr7_3:47330711-47330730 Msa1106760:intron 15.0%
!!! TCAAATTCATTTTATTAAAG+AGG - chr7_3:47330966-47330985 None:intergenic 15.0%
!!! ATCAAATTATTGTTTTACAT+AGG - chr7_3:47331021-47331040 None:intergenic 15.0%
!!! AACTTCTAAAAATTTGTTTA+CGG + chr7_3:47331484-47331503 Msa1106760:intron 15.0%
!!! ATTTTTTATTTAGCATAGAA+AGG + chr7_3:47331680-47331699 Msa1106760:intron 15.0%
!!! TTTTTTTTTTTTACAGAGTA+AGG + chr7_3:47331719-47331738 Msa1106760:intron 15.0%
!! AAAGAATTACAATTCATTAT+AGG + chr7_3:47331859-47331878 Msa1106760:intron 15.0%
!!! AAAAAAAGTATCCAAATTTA+TGG - chr7_3:47332170-47332189 None:intergenic 15.0%
!! TGGTAATTAAAAGAAAAATT+TGG + chr7_3:47332548-47332567 Msa1106760:three_prime_UTR 15.0%
!! ATCCAATACTTATTTAATTA+AGG + chr7_3:47332824-47332843 Msa1106760:three_prime_UTR 15.0%
!! TCCAATACTTATTTAATTAA+GGG + chr7_3:47332825-47332844 Msa1106760:three_prime_UTR 15.0%
!! TCTTAATGGCAAAATTAAAA+AGG + chr7_3:47329483-47329502 Msa1106760:intron 20.0%
!! CTTAGGCATAATATAAAAAA+GGG + chr7_3:47330000-47330019 Msa1106760:intron 20.0%
!! AATTATGATGTATTACGTAA+GGG - chr7_3:47330027-47330046 None:intergenic 20.0%
!! AAATTATGATGTATTACGTA+AGG - chr7_3:47330028-47330047 None:intergenic 20.0%
!! TTAAGATTAATTACTCTAGT+AGG + chr7_3:47330227-47330246 Msa1106760:intron 20.0%
!! TTATAAAATTCCCAATTTCT+TGG + chr7_3:47330281-47330300 Msa1106760:intron 20.0%
!! AAATATACTTAATATTAGCG+AGG + chr7_3:47330318-47330337 Msa1106760:intron 20.0%
!! AAACTAAAAAATTTATACGG+AGG + chr7_3:47330419-47330438 Msa1106760:intron 20.0%
!! AACTAAAAAATTTATACGGA+GGG + chr7_3:47330420-47330439 Msa1106760:intron 20.0%
!! TAGAAATCTTTGTATATAAG+GGG + chr7_3:47330449-47330468 Msa1106760:intron 20.0%
!! ATATAGCAAATTAAGACAAA+AGG + chr7_3:47330476-47330495 Msa1106760:intron 20.0%
!! TATAGCAAATTAAGACAAAA+GGG + chr7_3:47330477-47330496 Msa1106760:intron 20.0%
!!! TATAGAAATATTTGGTTTCT+GGG - chr7_3:47330578-47330597 None:intergenic 20.0%
!!! ATATAGAAATATTTGGTTTC+TGG - chr7_3:47330579-47330598 None:intergenic 20.0%
!!! AAAAAAAATTTTACGAAAGG+GGG - chr7_3:47330605-47330624 None:intergenic 20.0%
!!! CCTAAAAAAAATTTTACGAA+AGG - chr7_3:47330608-47330627 None:intergenic 20.0%
!!! CCTTTCGTAAAATTTTTTTT+AGG + chr7_3:47330605-47330624 Msa1106760:intron 20.0%
!!! AATTCATTTTATTAAAGAGG+AGG - chr7_3:47330963-47330982 None:intergenic 20.0%
!! GTAAAACAATAATTTGATTC+AGG + chr7_3:47331023-47331042 Msa1106760:intron 20.0%
!! ATATTGCATATTATATACAG+AGG + chr7_3:47331260-47331279 Msa1106760:intron 20.0%
!!! ACATATTTTTTTTTTGGTAG+TGG - chr7_3:47331345-47331364 None:intergenic 20.0%
!!! ACTCACACATATTTTTTTTT+TGG - chr7_3:47331351-47331370 None:intergenic 20.0%
!! TTGGTTATGAATTAATCTTT+AGG + chr7_3:47331447-47331466 Msa1106760:intron 20.0%
!! TGGTTATGAATTAATCTTTA+GGG + chr7_3:47331448-47331467 Msa1106760:intron 20.0%
!! GTAGAAATTTCAAGATATTT+AGG - chr7_3:47331799-47331818 None:intergenic 20.0%
!!! AGAAAAGTATTTGTTATATC+AGG + chr7_3:47332409-47332428 Msa1106760:three_prime_UTR 20.0%
!!! TTTCTTTTAATTACCATATG+TGG - chr7_3:47332544-47332563 None:intergenic 20.0%
!! ACCCTTAATTAAATAAGTAT+TGG - chr7_3:47332829-47332848 None:intergenic 20.0%
! TTCCTTATCTTAACTCTTAA+TGG + chr7_3:47329469-47329488 Msa1106760:intron 25.0%
! ATGTTATACATGGTAATTGA+TGG + chr7_3:47329575-47329594 Msa1106760:intron 25.0%
! TTAATAAATGTTTGGAAGAG+TGG + chr7_3:47329760-47329779 Msa1106760:CDS 25.0%
!! ATTGTTTCTTCTATCTTTCA+AGG + chr7_3:47329858-47329877 Msa1106760:CDS 25.0%
!!! CCTTTTTTATATTATGCCTA+AGG - chr7_3:47330002-47330021 None:intergenic 25.0%
! CCTTAGGCATAATATAAAAA+AGG + chr7_3:47329999-47330018 Msa1106760:intron 25.0%
! ATTATGATGTATTACGTAAG+GGG - chr7_3:47330026-47330045 None:intergenic 25.0%
! ATCTTAATGTTGTCTTTCAA+AGG - chr7_3:47330214-47330233 None:intergenic 25.0%
! AGAAATCTTTGTATATAAGG+GGG + chr7_3:47330450-47330469 Msa1106760:intron 25.0%
! AGCATTGTTTACCTAAAATA+AGG - chr7_3:47330725-47330744 None:intergenic 25.0%
!! GTTATCTACTATTTTCTTCA+TGG - chr7_3:47330758-47330777 None:intergenic 25.0%
! TGAAGATATATCAACTACAT+TGG + chr7_3:47330783-47330802 Msa1106760:CDS 25.0%
! GAAGATATATCAACTACATT+GGG + chr7_3:47330784-47330803 Msa1106760:CDS 25.0%
!! CATATTTTATGCATTGTCTA+GGG - chr7_3:47331298-47331317 None:intergenic 25.0%
!!! TTAGTCGAGAACTTTTTTTT+TGG - chr7_3:47331395-47331414 None:intergenic 25.0%
!!! ACTATTACTACTTTTAGTAG+TGG - chr7_3:47331617-47331636 None:intergenic 25.0%
! AATTTAGTGACTTCTAAATC+TGG - chr7_3:47331663-47331682 None:intergenic 25.0%
! TTTATGGATGAAGAAGATAA+AGG - chr7_3:47332154-47332173 None:intergenic 25.0%
! ATCTTCTTCATCCATAAATT+TGG + chr7_3:47332156-47332175 Msa1106760:three_prime_UTR 25.0%
!! CTTAATCTCGTTTTATGTTT+GGG - chr7_3:47332518-47332537 None:intergenic 25.0%
!!! AGTACAATTGTAGTTTTTTC+TGG - chr7_3:47332771-47332790 None:intergenic 25.0%
GTAGTTATCAACTAGAAACA+TGG + chr7_3:47329353-47329372 Msa1106760:exon 30.0%
TGCCATTAAGAGTTAAGATA+AGG - chr7_3:47329474-47329493 None:intergenic 30.0%
! CACATTGTTGTGATTTTATC+AGG + chr7_3:47330055-47330074 Msa1106760:intron 30.0%
!!! TTTTTTGGTAGTAAAATGCG+AGG - chr7_3:47330098-47330117 None:intergenic 30.0%
AAATCATGTGAGACGAATTT+AGG - chr7_3:47330160-47330179 None:intergenic 30.0%
GTATAGCAATGTTTACTGAA+AGG - chr7_3:47330549-47330568 None:intergenic 30.0%
GGGGTGTATATAGAAATATT+TGG - chr7_3:47330586-47330605 None:intergenic 30.0%
! TATTTTCTTCATGGTAGGTT+TGG - chr7_3:47330749-47330768 None:intergenic 30.0%
! TCTACTATTTTCTTCATGGT+AGG - chr7_3:47330754-47330773 None:intergenic 30.0%
! TTCTAAAGGAATCTGGATAT+GGG + chr7_3:47330854-47330873 Msa1106760:CDS 30.0%
! AATAGCTTTTAAACCTGCAA+CGG - chr7_3:47330899-47330918 None:intergenic 30.0%
ACAATAATTTGATTCAGGAG+CGG + chr7_3:47331028-47331047 Msa1106760:intron 30.0%
TGCATTTGTTCATGTAAGAT+AGG + chr7_3:47331161-47331180 Msa1106760:intron 30.0%
CGAGAACTTTAATAACATGT+TGG - chr7_3:47331206-47331225 None:intergenic 30.0%
TGCATATTATATACAGAGGT+CGG + chr7_3:47331264-47331283 Msa1106760:intron 30.0%
! GCATATTTTATGCATTGTCT+AGG - chr7_3:47331299-47331318 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + chr7_3:47331300-47331319 Msa1106760:intron 30.0%
CATAAAATATGCAAGGTCTA+GGG + chr7_3:47331307-47331326 Msa1106760:intron 30.0%
!!! TTTTTTTTTTGGTAGTGGCT+GGG - chr7_3:47331340-47331359 None:intergenic 30.0%
!!! ATTTTTTTTTTGGTAGTGGC+TGG - chr7_3:47331341-47331360 None:intergenic 30.0%
AAAAGTTCTCGACTAAATAG+TGG + chr7_3:47331399-47331418 Msa1106760:intron 30.0%
AAGTAGTAATAGTTCACGTT+TGG + chr7_3:47331624-47331643 Msa1106760:intron 30.0%
GAGTAAGGATAATTATTGAG+AGG + chr7_3:47331734-47331753 Msa1106760:intron 30.0%
! ATGTTTATACTGCTTGTTAC+AGG + chr7_3:47331916-47331935 Msa1106760:intron 30.0%
GGACAAATAATAGCTATTGA+TGG + chr7_3:47332070-47332089 Msa1106760:CDS 30.0%
CAAATAATAGCTATTGATGG+AGG + chr7_3:47332073-47332092 Msa1106760:CDS 30.0%
AAGAAGATAAAGGAGATAGA+AGG - chr7_3:47332144-47332163 None:intergenic 30.0%
AATCATGGATGATGAAGAAA+GGG - chr7_3:47332239-47332258 None:intergenic 30.0%
AAATCATGGATGATGAAGAA+AGG - chr7_3:47332240-47332259 None:intergenic 30.0%
TGTGACACTTAATTTCTTGT+TGG - chr7_3:47332438-47332457 None:intergenic 30.0%
! GCTTAATCTCGTTTTATGTT+TGG - chr7_3:47332519-47332538 None:intergenic 30.0%
!! CTTTTAATTACCATATGTGG+TGG - chr7_3:47332541-47332560 None:intergenic 30.0%
! TTAAGCTACAATCCTTTTAG+TGG - chr7_3:47332589-47332608 None:intergenic 30.0%
GCTTTCTATTAATCAACTTG+TGG - chr7_3:47332618-47332637 None:intergenic 30.0%
!!! TAATAGAAAGCCACTTTTGT+TGG + chr7_3:47332627-47332646 Msa1106760:three_prime_UTR 30.0%
TTTCTTGTGTTTGGACTATT+TGG - chr7_3:47332669-47332688 None:intergenic 30.0%
! TGATCTGATTTTCTTGTGTT+TGG - chr7_3:47332678-47332697 None:intergenic 30.0%
AACAAAGTTAAGCAGCATCA+AGG + chr7_3:47329380-47329399 Msa1106760:CDS 35.0%
GATAAAAGATGGTCACTACA+TGG + chr7_3:47329402-47329421 Msa1106760:CDS 35.0%
GTTGAAGAGTTAGCTGAATT+TGG + chr7_3:47329699-47329718 Msa1106760:CDS 35.0%
AGCAAGGGATTTAATGTAAC+AGG + chr7_3:47329786-47329805 Msa1106760:CDS 35.0%
TGAACAACGCAAGAAACTAA+TGG + chr7_3:47329833-47329852 Msa1106760:CDS 35.0%
!!! TACATGTTTTGAGGACTTAG+AGG - chr7_3:47329935-47329954 None:intergenic 35.0%
! GAGACGAATTTAGGATAATG+TGG - chr7_3:47330151-47330170 None:intergenic 35.0%
AGGCACGTTATTAGAAACAA+AGG + chr7_3:47330338-47330357 Msa1106760:intron 35.0%
GGCACGTTATTAGAAACAAA+GGG + chr7_3:47330339-47330358 Msa1106760:intron 35.0%
AAAGGGCCATAAACATTTAC+AGG + chr7_3:47330494-47330513 Msa1106760:intron 35.0%
CTGAAGCCTGTAAATGTTTA+TGG - chr7_3:47330503-47330522 None:intergenic 35.0%
TACAGCCTTTCAACATGTTT+GGG + chr7_3:47330523-47330542 Msa1106760:intron 35.0%
! AGAAATATTTGGTTTCTGGG+CGG - chr7_3:47330575-47330594 None:intergenic 35.0%
ATATTGTCAAAAAACAGGGC+CGG - chr7_3:47330684-47330703 None:intergenic 35.0%
! TTGGGAACAAATTTTGTGTC+TGG + chr7_3:47330802-47330821 Msa1106760:CDS 35.0%
! ATCCAGATTCCTTTAGAAGT+GGG - chr7_3:47330852-47330871 None:intergenic 35.0%
! TATCCAGATTCCTTTAGAAG+TGG - chr7_3:47330853-47330872 None:intergenic 35.0%
! CTTCTAAAGGAATCTGGATA+TGG + chr7_3:47330853-47330872 Msa1106760:CDS 35.0%
GCAGCATAAACAGATAAAAC+AGG - chr7_3:47330922-47330941 None:intergenic 35.0%
GAGGAAAAACATACCTTTAG+TGG - chr7_3:47330944-47330963 None:intergenic 35.0%
GAATCAATTCACCAAGAACT+TGG + chr7_3:47331052-47331071 Msa1106760:CDS 35.0%
CAAGAACTTGGCATTAGAAT+GGG + chr7_3:47331064-47331083 Msa1106760:CDS 35.0%
TAATATTCGTGCAAATGCTG+TGG + chr7_3:47331094-47331113 Msa1106760:CDS 35.0%
ACCTGTTAAGACATCACTTT+CGG + chr7_3:47331124-47331143 Msa1106760:CDS 35.0%
ATCACTTTCGGAATCAATCA+TGG + chr7_3:47331136-47331155 Msa1106760:CDS 35.0%
GCATATTATATACAGAGGTC+GGG + chr7_3:47331265-47331284 Msa1106760:intron 35.0%
CATATTATATACAGAGGTCG+GGG + chr7_3:47331266-47331285 Msa1106760:intron 35.0%
GCATAAAATATGCAAGGTCT+AGG + chr7_3:47331306-47331325 Msa1106760:intron 35.0%
!!! TTTTTTTTTGGTAGTGGCTG+GGG - chr7_3:47331339-47331358 None:intergenic 35.0%
!! TTTTTGGTGAAGTAGCATAG+TGG - chr7_3:47331379-47331398 None:intergenic 35.0%
! TCTTCTCAGAGTATCACATT+TGG + chr7_3:47331428-47331447 Msa1106760:intron 35.0%
!! AGCTATAGCTTTATACCCTT+CGG - chr7_3:47331951-47331970 None:intergenic 35.0%
TGTCTTGTAACTACGTTGTT+TGG + chr7_3:47332291-47332310 Msa1106760:three_prime_UTR 35.0%
! TGCTTGAGAGACTAAGTTTT+TGG - chr7_3:47332366-47332385 None:intergenic 35.0%
! ATTTTCCGTCAACCACTAAA+AGG + chr7_3:47332574-47332593 Msa1106760:three_prime_UTR 35.0%
! ACAATCCTTTTAGTGGTTGA+CGG - chr7_3:47332582-47332601 None:intergenic 35.0%
ATGACAGTTTCCAACAAAAG+TGG - chr7_3:47332640-47332659 None:intergenic 35.0%
ACTACAATATTCCGATCAGT+AGG - chr7_3:47332734-47332753 None:intergenic 35.0%
GCAGCATCAAGGATAAAAGA+TGG + chr7_3:47329391-47329410 Msa1106760:CDS 40.0%
AAGGAAATTACCCAATGCCA+CGG - chr7_3:47329455-47329474 None:intergenic 40.0%
TTTGGAAGAGTGGAAAAGCA+AGG + chr7_3:47329770-47329789 Msa1106760:CDS 40.0%
TTGGAAGAGTGGAAAAGCAA+GGG + chr7_3:47329771-47329790 Msa1106760:CDS 40.0%
! GGTCTGTAAAACTCTAGGAA+CGG - chr7_3:47329981-47330000 None:intergenic 40.0%
CCTAAGGTCTGTAAAACTCT+AGG - chr7_3:47329986-47330005 None:intergenic 40.0%
! CCTAGAGTTTTACAGACCTT+AGG + chr7_3:47329983-47330002 Msa1106760:intron 40.0%
GTACAGCCTTTCAACATGTT+TGG + chr7_3:47330522-47330541 Msa1106760:intron 40.0%
AAAGGCCCAAACATGTTGAA+AGG - chr7_3:47330531-47330550 None:intergenic 40.0%
TCTGTTTATGCTGCCACTAA+AGG + chr7_3:47330928-47330947 Msa1106760:CDS 40.0%
CCATTCTAATGCCAAGTTCT+TGG - chr7_3:47331066-47331085 None:intergenic 40.0%
CCAAGAACTTGGCATTAGAA+TGG + chr7_3:47331063-47331082 Msa1106760:CDS 40.0%
TCCGAAAGTGATGTCTTAAC+AGG - chr7_3:47331128-47331147 None:intergenic 40.0%
TACCAACTGAGCTAAGTTCA+CGG - chr7_3:47331237-47331256 None:intergenic 40.0%
! TGAACTTAGCTCAGTTGGTA+GGG + chr7_3:47331237-47331256 Msa1106760:intron 40.0%
TTACAGGATTATGACTCCGA+AGG + chr7_3:47331932-47331951 Msa1106760:intron 40.0%
TACAGGATTATGACTCCGAA+GGG + chr7_3:47331933-47331952 Msa1106760:intron 40.0%
! GAAGGGTATAAAGCTATAGC+TGG + chr7_3:47331950-47331969 Msa1106760:CDS 40.0%
GAAGAAAGGGAAAAGAGAGA+AGG - chr7_3:47332226-47332245 None:intergenic 40.0%
GCACTCAAACGACAAAATCA+TGG - chr7_3:47332254-47332273 None:intergenic 40.0%
ACAATATTCCGATCAGTAGG+TGG - chr7_3:47332731-47332750 None:intergenic 40.0%
AGGAAATTACCCAATGCCAC+GGG - chr7_3:47329454-47329473 None:intergenic 45.0%
!!! TTTTTTTTAGGGCCCCCTAC+CGG + chr7_3:47330617-47330636 Msa1106760:intron 45.0%
! GGTGTGCAAGTTGACACAAA+TGG - chr7_3:47330831-47330850 None:intergenic 45.0%
ACTTGCACACCCACTTCTAA+AGG + chr7_3:47330840-47330859 Msa1106760:CDS 45.0%
! CACCCACTTCTAAAGGAATC+TGG + chr7_3:47330847-47330866 Msa1106760:CDS 45.0%
GTGTTTACTTCTTCCGTTGC+AGG + chr7_3:47330883-47330902 Msa1106760:CDS 45.0%
CTTGGCATTAGAATGGGCAA+AGG + chr7_3:47331070-47331089 Msa1106760:CDS 45.0%
AGTGATGTCTTAACAGGTCC+AGG - chr7_3:47331122-47331141 None:intergenic 45.0%
TGAGCTAAGTTCACGGAGAT+TGG - chr7_3:47331230-47331249 None:intergenic 45.0%
GTGAACTTAGCTCAGTTGGT+AGG + chr7_3:47331236-47331255 Msa1106760:intron 45.0%
GTAGTGTCTCAAACTCCTAC+AGG + chr7_3:47331974-47331993 Msa1106760:CDS 45.0%
TCAAACTCCTACAGGTCGTA+TGG + chr7_3:47331982-47332001 Msa1106760:CDS 45.0%
CAAACTCCTACAGGTCGTAT+GGG + chr7_3:47331983-47332002 Msa1106760:CDS 45.0%
CTTAGTCTCTCAAGCACAAG+AGG + chr7_3:47332370-47332389 Msa1106760:three_prime_UTR 45.0%
CGAGATTAAGCCACCACATA+TGG + chr7_3:47332528-47332547 Msa1106760:three_prime_UTR 45.0%
TTGAGAAGCCACCTACTGAT+CGG + chr7_3:47332720-47332739 Msa1106760:three_prime_UTR 45.0%
AATGTTAACCGTTGTCCCTG+AGG + chr7_3:47332849-47332868 Msa1106760:three_prime_UTR 45.0%
CTTCCTTAACATGTGCCTCA+GGG - chr7_3:47332867-47332886 None:intergenic 45.0%
!!! TATTTTTATATTTTTAAACT+AGG + chr7_3:47329667-47329686 Msa1106760:intron 5.0%
!! CAATTAAATAAAAATATAAA+TGG - chr7_3:47329907-47329926 None:intergenic 5.0%
!!! ATGATATAATTTAATTTTTT+TGG + chr7_3:47330186-47330205 Msa1106760:intron 5.0%
!!! TGATATAATTTAATTTTTTT+GGG + chr7_3:47330187-47330206 Msa1106760:intron 5.0%
!!! AAAAATTTTGATATTTTTTT+GGG - chr7_3:47330365-47330384 None:intergenic 5.0%
!!! AAAAAATTTTGATATTTTTT+TGG - chr7_3:47330366-47330385 None:intergenic 5.0%
!!! TTTTTTGATAATAATTTTTT+TGG + chr7_3:47330382-47330401 Msa1106760:intron 5.0%
GGTATGACTGCGATAGTGAC+AGG + chr7_3:47329423-47329442 Msa1106760:CDS 50.0%
ATGACTGCGATAGTGACAGG+TGG + chr7_3:47329426-47329445 Msa1106760:CDS 50.0%
CTCCGTGAACTTAGCTCAGT+TGG + chr7_3:47331232-47331251 Msa1106760:intron 50.0%
CCAGTGATATGTGATGCAGC+TGG - chr7_3:47332052-47332071 None:intergenic 50.0%
CCAGCTGCATCACATATCAC+TGG + chr7_3:47332049-47332068 Msa1106760:CDS 50.0%
AACATGTGCCTCAGGGACAA+CGG - chr7_3:47332860-47332879 None:intergenic 50.0%
TGTCCCTGAGGCACATGTTA+AGG + chr7_3:47332861-47332880 Msa1106760:three_prime_UTR 50.0%
GCTTCCTTAACATGTGCCTC+AGG - chr7_3:47332868-47332887 None:intergenic 50.0%
ATAGTGACAGGTGGAACCCG+TGG + chr7_3:47329435-47329454 Msa1106760:CDS 55.0%
CAAAAAACAGGGCCGGTCCT+AGG - chr7_3:47330677-47330696 None:intergenic 55.0%
GTCTCTCCCATACGACCTGT+AGG - chr7_3:47331992-47332011 None:intergenic 55.0%
ACAGGTGGAACCCGTGGCAT+TGG + chr7_3:47329441-47329460 Msa1106760:CDS 60.0%
CAGGTGGAACCCGTGGCATT+GGG + chr7_3:47329442-47329461 Msa1106760:CDS 60.0%
CGTGCAAATGCTGTGGCACC+TGG + chr7_3:47331101-47331120 Msa1106760:CDS 60.0%
! TTTAGGGCCCCCTACCGGCA+AGG + chr7_3:47330622-47330641 Msa1106760:intron 65.0%
TTAGGGCCCCCTACCGGCAA+GGG + chr7_3:47330623-47330642 Msa1106760:intron 65.0%
CGGTCCTAGGCATAGGCCAG+GGG - chr7_3:47330664-47330683 None:intergenic 65.0%
CCGGTCCTAGGCATAGGCCA+GGG - chr7_3:47330665-47330684 None:intergenic 65.0%
CCCTGGCCTATGCCTAGGAC+CGG + chr7_3:47330662-47330681 Msa1106760:intron 65.0%
ACAGGGCCGGTCCTAGGCAT+AGG - chr7_3:47330671-47330690 None:intergenic 65.0%
CTAGGGCCCTTGCCGGTAGG+GGG - chr7_3:47330632-47330651 None:intergenic 70.0%
CCTAGGGCCCTTGCCGGTAG+GGG - chr7_3:47330633-47330652 None:intergenic 70.0%
GCCTAGGGCCCTTGCCGGTA+GGG - chr7_3:47330634-47330653 None:intergenic 70.0%
! GGCATAGGCCAGGGGTGCGA+CGG - chr7_3:47330656-47330675 None:intergenic 70.0%
CGCACCCCTGGCCTATGCCT+AGG + chr7_3:47330657-47330676 Msa1106760:intron 70.0%
GCCGGTCCTAGGCATAGGCC+AGG - chr7_3:47330666-47330685 None:intergenic 70.0%
CCCCTACCGGCAAGGGCCCT+AGG + chr7_3:47330630-47330649 Msa1106760:intron 75.0%
GGCCTAGGGCCCTTGCCGGT+AGG - chr7_3:47330635-47330654 None:intergenic 75.0%
CGACGGCCTAGGGCCCTTGC+CGG - chr7_3:47330639-47330658 None:intergenic 75.0%
! GCCAGGGGTGCGACGGCCTA+GGG - chr7_3:47330649-47330668 None:intergenic 75.0%
! GCCCTAGGCCGTCGCACCCC+TGG + chr7_3:47330645-47330664 Msa1106760:intron 80.0%
!! GGCCAGGGGTGCGACGGCCT+AGG - chr7_3:47330650-47330669 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 47329295 47332916 47329295 ID=Msa1106760;Name=Msa1106760
chr7_3 mRNA 47329295 47332916 47329295 ID=Msa1106760-mRNA-1;Parent=Msa1106760;Name=Msa1106760-mRNA-1;_AED=0.21;_eAED=0.21;_QI=77|1|1|1|0.75|0.8|5|808|266
chr7_3 exon 47329295 47329463 47329295 ID=Msa1106760-mRNA-1:exon:9642;Parent=Msa1106760-mRNA-1
chr7_3 exon 47329689 47329896 47329689 ID=Msa1106760-mRNA-1:exon:9643;Parent=Msa1106760-mRNA-1
chr7_3 exon 47330733 47330949 47330733 ID=Msa1106760-mRNA-1:exon:9644;Parent=Msa1106760-mRNA-1
chr7_3 exon 47331045 47331157 47331045 ID=Msa1106760-mRNA-1:exon:9645;Parent=Msa1106760-mRNA-1
chr7_3 exon 47331938 47332916 47331938 ID=Msa1106760-mRNA-1:exon:9646;Parent=Msa1106760-mRNA-1
chr7_3 five_prime_UTR 47329295 47329371 47329295 ID=Msa1106760-mRNA-1:five_prime_utr;Parent=Msa1106760-mRNA-1
chr7_3 CDS 47329372 47329463 47329372 ID=Msa1106760-mRNA-1:cds;Parent=Msa1106760-mRNA-1
chr7_3 CDS 47329689 47329896 47329689 ID=Msa1106760-mRNA-1:cds;Parent=Msa1106760-mRNA-1
chr7_3 CDS 47330733 47330949 47330733 ID=Msa1106760-mRNA-1:cds;Parent=Msa1106760-mRNA-1
chr7_3 CDS 47331045 47331157 47331045 ID=Msa1106760-mRNA-1:cds;Parent=Msa1106760-mRNA-1
chr7_3 CDS 47331938 47332108 47331938 ID=Msa1106760-mRNA-1:cds;Parent=Msa1106760-mRNA-1
chr7_3 three_prime_UTR 47332109 47332916 47332109 ID=Msa1106760-mRNA-1:three_prime_utr;Parent=Msa1106760-mRNA-1
Gene Sequence

>Msa1106760

ATGGCTGAAACAAAGTTAAGCAGCATCAAGGATAAAAGATGGTCACTACATGGTATGACTGCGATAGTGACAGGTGGAACCCGTGGCATTGGGTACGCAATTGTTGAAGAGTTAGCTGAATTTGGAGCATCTGTTCATATATGTGCACGTAATGAAGAAGATATTAATAAATGTTTGGAAGAGTGGAAAAGCAAGGGATTTAATGTAACAGGATCAGTATGTGATATACTATTTCATGAACAACGCAAGAAACTAATGGAAATTGTTTCTTCTATCTTTCAAGGAAAGCTCAATATTCTAGTAAACAATGCTGCCAAACCTACCATGAAGAAAATAGTAGATAACACTGATGAAGATATATCAACTACATTGGGAACAAATTTTGTGTCTGGTTACCATTTGTGTCAACTTGCACACCCACTTCTAAAGGAATCTGGATATGGGAGCATAGTGTTTACTTCTTCCGTTGCAGGTTTAAAAGCTATTCCTGTTTTATCTGTTTATGCTGCCACTAAAGGAGCGGTGAATCAATTCACCAAGAACTTGGCATTAGAATGGGCAAAGGATAATATTCGTGCAAATGCTGTGGCACCTGGACCTGTTAAGACATCACTTTCGGAATCAATCATGGATTATGACTCCGAAGGGTATAAAGCTATAGCTGGTGTAGTGTCTCAAACTCCTACAGGTCGTATGGGAGAGACTAAAGAGATATCAGCACTAGTTGCTTTTCTTTGTCTTCCAGCTGCATCACATATCACTGGACAAATAATAGCTATTGATGGAGGTTACACTTCATAG
Protein sequence

>Msa1106760

MAETKLSSIKDKRWSLHGMTAIVTGGTRGIGYAIVEELAEFGASVHICARNEEDINKCLEEWKSKGFNVTGSVCDILFHEQRKKLMEIVSSIFQGKLNILVNNAAKPTMKKIVDNTDEDISTTLGTNFVSGYHLCQLAHPLLKESGYGSIVFTSSVAGLKAIPVLSVYAATKGAVNQFTKNLALEWAKDNIRANAVAPGPVKTSLSESIMDYDSEGYKAIAGVVSQTPTGRMGETKEISALVAFLCLPAASHITGQIIAIDGGYTS*