AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1085580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085580 MtrunA17_Chr8g0393271 97.067 341 6 1 1 337 1 341 0.0 686
Msa1085580 MtrunA17_Chr6g0479451 67.742 310 98 2 28 337 24 331 7.51e-157 442
Msa1085580 MtrunA17_Chr8g0375761 66.978 321 102 3 19 337 8 326 9.75e-155 437
Msa1085580 MtrunA17_Chr8g0375821 61.688 308 118 0 29 336 66 373 5.05e-142 406
Msa1085580 MtrunA17_Chr8g0375781 59.062 320 131 0 17 336 17 336 3.69e-141 403
Msa1085580 MtrunA17_Chr8g0375791 58.264 242 95 1 29 264 29 270 1.32e-96 290
Msa1085580 MtrunA17_Chr8g0375901 43.609 266 73 3 71 336 1 189 1.39e-66 207
Msa1085580 MtrunA17_Chr8g0375921 54.839 93 42 0 244 336 70 162 1.66e-31 116
Msa1085580 MtrunA17_Chr8g0375811 57.353 68 28 1 269 336 7 73 5.86e-19 80.1
Msa1085580 MtrunA17_Chr8g0375891 73.077 52 14 0 71 122 47 98 1.44e-17 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085580 AT1G14700.1 65.686 306 103 2 21 325 48 352 1.37e-154 438
Msa1085580 AT1G14700.2 65.033 306 103 3 21 325 48 350 2.26e-151 430
Msa1085580 AT2G01890.1 63.279 305 111 1 21 325 19 322 4.66e-146 416
Msa1085580 AT1G25230.1 63.158 304 111 1 30 333 29 331 1.79e-144 411
Msa1085580 AT1G25230.3 63.158 304 111 1 30 333 52 354 4.64e-144 411
Msa1085580 AT3G17790.1 58.735 332 132 4 5 333 4 333 4.60e-143 408
Msa1085580 AT2G01880.1 59.621 317 125 3 17 332 10 324 3.71e-136 390
Msa1085580 AT1G14700.3 67.578 256 82 1 71 325 1 256 1.24e-132 379
Msa1085580 AT2G01890.2 58.361 305 98 2 21 325 19 294 2.26e-127 367
Msa1085580 AT1G14700.4 67.073 246 80 1 21 266 48 292 2.48e-126 363
Msa1085580 AT1G25230.2 63.498 263 96 0 71 333 1 263 3.80e-126 362
Msa1085580 AT2G01890.3 65.490 255 88 0 71 325 1 255 5.74e-125 359

Find 150 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGTCGTTTCCTATCTTT+TGG 0.188402 7_2:-86367521 Msa1085580:three_prime_UTR
AATAAATACATTCATAATTA+AGG 0.195015 7_2:+86368208 None:intergenic
TACTGGTTGGTATTAATATT+GGG 0.244587 7_2:-86367697 Msa1085580:three_prime_UTR
CACACAACACAGATGTAAAT+TGG 0.249033 7_2:+86370040 None:intergenic
TTACTGGTTGGTATTAATAT+TGG 0.270108 7_2:-86367698 Msa1085580:three_prime_UTR
CAATCATACTTGTGATCCTT+TGG 0.285376 7_2:+86369271 None:intergenic
CAACATAACATGGGTGGTTT+AGG 0.292659 7_2:-86370100 Msa1085580:exon
TATATAAACAAATTATGAAT+TGG 0.295940 7_2:+86367882 None:intergenic
GGGCAAATGTTCGAGCTTTA+CGG 0.308458 7_2:-86367773 Msa1085580:three_prime_UTR
TTCAAAATATTGATCATAGA+TGG 0.323098 7_2:-86369479 Msa1085580:CDS
TACCAACCAGTAAACTCTTA+TGG 0.332160 7_2:+86367708 None:intergenic
CCAGCTTGTATTGTAATTGT+AGG 0.332907 7_2:+86370256 None:intergenic
AACCAATGGTATGAGATATA+TGG 0.347609 7_2:+86370371 None:intergenic
ATAAGCGCAGAAGCGTTCTT+TGG 0.349354 7_2:+86368168 None:intergenic
GAGTGAAGACTTTAGGATAT+TGG 0.354567 7_2:-86368087 Msa1085580:three_prime_UTR
GAATTTCCATAAGAGTTTAC+TGG 0.354633 7_2:-86367714 Msa1085580:three_prime_UTR
ACACTTAGCTTCCTCGTCAT+TGG 0.364659 7_2:-86369953 Msa1085580:CDS
GATTTAATTGTAGACATGAT+AGG 0.377945 7_2:+86367560 None:intergenic
CATGTACATATCAACATTGT+TGG 0.378981 7_2:+86368680 None:intergenic
GTTTGATAAATATTTCTTCC+TGG 0.379352 7_2:+86369234 None:intergenic
AAAATTCCGTTCATGTATCT+TGG 0.382094 7_2:-86367626 Msa1085580:three_prime_UTR
CACTGTAGCTGAATATTTAC+CGG 0.388676 7_2:-86367981 Msa1085580:three_prime_UTR
ATAATAGACCCCAACCAAAA+AGG 0.389472 7_2:+86370155 None:intergenic
GGCAAATGTTCGAGCTTTAC+GGG 0.391605 7_2:-86367772 Msa1085580:three_prime_UTR
ATCTTGTTATCAATCCCTAT+TGG 0.392673 7_2:-86370322 Msa1085580:five_prime_UTR
GTATTAATATTGGGGACTCT+TGG 0.397834 7_2:-86367688 Msa1085580:three_prime_UTR
GCTACATCAATCATGGGAAT+TGG 0.401591 7_2:+86368114 None:intergenic
GCTTCCTCGTCATTGGAGAC+TGG 0.404371 7_2:-86369946 Msa1085580:CDS
TTCCCCAACTTATTTAGATC+AGG 0.415571 7_2:+86368270 None:intergenic
CTCTTCAGCTACATCAATCA+TGG 0.419608 7_2:+86368107 None:intergenic
GGTCCTGATCTAAATAAGTT+GGG 0.421528 7_2:-86368273 Msa1085580:three_prime_UTR
TTGGGGAAAATTGTGAAATC+TGG 0.424049 7_2:-86368255 Msa1085580:three_prime_UTR
ATATAAACAAATTATGAATT+GGG 0.424356 7_2:+86367883 None:intergenic
AGCTGAAGAGTGAAGACTTT+AGG 0.426263 7_2:-86368094 Msa1085580:three_prime_UTR
CAAGTTAAACATTGACTTTG+TGG 0.429435 7_2:-86369772 Msa1085580:CDS
AATTGCCGAGTTCTTCTTCG+TGG 0.432299 7_2:-86369329 Msa1085580:CDS
TCTATTCTAAAATGCAAGGT+TGG 0.435042 7_2:-86367650 Msa1085580:three_prime_UTR
TAATGAGTGACCTCAAGAAT+TGG 0.436245 7_2:+86368999 None:intergenic
TTAAAATTAATAAAATCATA+TGG 0.442708 7_2:-86368048 Msa1085580:three_prime_UTR
TACATTATGCGATATAAGTA+AGG 0.442744 7_2:-86368319 Msa1085580:exon
ATTGACTTTGTGGTATCAAC+CGG 0.442770 7_2:-86369762 Msa1085580:CDS
AATCTCTTAGTGCTGTTTCG+AGG 0.448837 7_2:+86369114 None:intergenic
GAGAAGGAATATTGAAAAGC+AGG 0.451116 7_2:+86369699 None:intergenic
CAAAGGATCACAAGTATGAT+TGG 0.454103 7_2:-86369270 Msa1085580:CDS
ATGTATCTTGGTCTTTCGAT+TGG 0.457897 7_2:-86367614 Msa1085580:three_prime_UTR
CTTCCTCGTCATTGGAGACT+GGG 0.458606 7_2:-86369945 Msa1085580:CDS
CATAGACAGGAAGCGCGGTT+AGG 0.460415 7_2:+86367471 None:intergenic
CTATTCTAAAATGCAAGGTT+GGG 0.461686 7_2:-86367649 Msa1085580:three_prime_UTR
TTCAGCTACAGTGCAGTGTA+TGG 0.463765 7_2:+86367991 None:intergenic
GAGGTGTGTTAAGAGCTCTT+TGG 0.465895 7_2:+86369025 None:intergenic
ATATTGGTACATATAAATAT+AGG 0.469836 7_2:-86368071 Msa1085580:three_prime_UTR
ATATTTATCAAACCTCTTGA+AGG 0.471888 7_2:-86369224 Msa1085580:intron
AGAAAGTACTTGTCCACAAA+AGG 0.472357 7_2:+86369298 None:intergenic
TTTGATAAATATTTCTTCCT+GGG 0.475526 7_2:+86369235 None:intergenic
GAAGCCATGCGTTTGATCTC+CGG 0.479900 7_2:+86367962 None:intergenic
GTGGCATCTGCTTTGACAGC+AGG 0.480379 7_2:+86369974 None:intergenic
TATCTTGGTCTTTCGATTGG+TGG 0.482754 7_2:-86367611 Msa1085580:three_prime_UTR
GGGTCCTGATCTAAATAAGT+TGG 0.487351 7_2:-86368274 Msa1085580:three_prime_UTR
CCTGAAAAGCAACTTGAGAC+TGG 0.496595 7_2:+86369903 None:intergenic
AATGTTGATATGTACATGAA+TGG 0.499703 7_2:-86368675 Msa1085580:CDS
AGCAACTTGAGACTGGTTGT+AGG 0.500595 7_2:+86369910 None:intergenic
GAATGGGCACGACCACTGCT+TGG 0.505736 7_2:-86368658 Msa1085580:CDS
CAACATCTCCTCTGTAGTCA+TGG 0.506496 7_2:+86369523 None:intergenic
TATATATAAGAAGTTGTGTT+GGG 0.512307 7_2:+86370192 None:intergenic
TTCTATGACGATGGATTGAC+TGG 0.514825 7_2:-86369732 Msa1085580:CDS
TGATAACAAGATGGATGGAA+AGG 0.515973 7_2:+86370333 None:intergenic
AAGAAGGAAAGAGCATAGAC+AGG 0.517335 7_2:+86367458 None:intergenic
TATCGCATAATGTAACTCCT+TGG 0.517717 7_2:+86368328 None:intergenic
ATTGGAGAGGTGTACTTCCC+AGG 0.523199 7_2:-86369252 Msa1085580:CDS
CAGTTCTTGACTAGTGGTGG+AGG 0.524399 7_2:-86368509 Msa1085580:CDS
TGTCAAATCCGCATCTAAAG+AGG 0.529916 7_2:-86368295 Msa1085580:three_prime_UTR
CATCATCCACTGAGAAGCAT+AGG 0.532278 7_2:-86369062 Msa1085580:CDS
AATATCGTAATAGACAACTT+TGG 0.533584 7_2:+86368382 None:intergenic
TCCAAGTGGAAGATTGTTGT+GGG 0.534086 7_2:-86369086 Msa1085580:CDS
CGATTGGTGGTGATCCTCGA+AGG 0.536073 7_2:-86367598 Msa1085580:three_prime_UTR
GACTAGTGGTGGAGGCTCAA+AGG 0.536931 7_2:-86368501 Msa1085580:CDS
TGCCATATATCTCATACCAT+TGG 0.537657 7_2:-86370373 Msa1085580:five_prime_UTR
CTTGTCCATTATTGACTCCA+CGG 0.537915 7_2:-86370407 None:intergenic
ACTGGTTGGTATTAATATTG+GGG 0.538191 7_2:-86367696 Msa1085580:three_prime_UTR
TACAACACAACAACATAACA+TGG 0.538531 7_2:-86370110 Msa1085580:exon
GGGATTGATAACAAGATGGA+TGG 0.540448 7_2:+86370328 None:intergenic
CAGATGTAAATTGGAATCCA+TGG 0.540833 7_2:+86370049 None:intergenic
CAGCAGGGTGCTCAATGCGT+TGG 0.541284 7_2:+86369990 None:intergenic
ATGTTGATATGTACATGAAT+GGG 0.543838 7_2:-86368674 Msa1085580:CDS
AAATTGGAATCCATGGCCAC+AGG 0.544307 7_2:+86370056 None:intergenic
ATATATATAAGAAGTTGTGT+TGG 0.546028 7_2:+86370191 None:intergenic
GATAACAAGATGGATGGAAA+GGG 0.549414 7_2:+86370334 None:intergenic
TTCCAAGTGGAAGATTGTTG+TGG 0.555121 7_2:-86369087 Msa1085580:CDS
GGAGACAATTTCTATGACGA+TGG 0.555932 7_2:-86369741 Msa1085580:CDS
AATTGGAATCCATGGCCACA+GGG 0.558266 7_2:+86370057 None:intergenic
ATTGAAGAGAAACCATGGTA+TGG 0.558377 7_2:-86367860 Msa1085580:three_prime_UTR
TGGCATCTGCTTTGACAGCA+GGG 0.559566 7_2:+86369975 None:intergenic
GACAGGAAGCGCGGTTAGGA+CGG 0.560353 7_2:+86367475 None:intergenic
GAGTGACCTCAAGAATTGGC+AGG 0.565375 7_2:+86369003 None:intergenic
AGAGCTCTTTGGTGTCGCCA+TGG 0.570466 7_2:+86369036 None:intergenic
ATTGGAGACTGGGGAAGGAA+AGG 0.574215 7_2:-86369935 Msa1085580:CDS
ATCAGGACCCTCTTTAGATG+CGG 0.574714 7_2:+86368287 None:intergenic
GTGGTGGAGGCTCAAAGGCA+TGG 0.574843 7_2:-86368496 Msa1085580:CDS
TACTTATGTGTTCCAAGCAG+TGG 0.576046 7_2:+86368646 None:intergenic
AACACATAAGTAGCACGGAC+AGG 0.579071 7_2:-86368635 Msa1085580:intron
ATCGTCATAGAAATTGTCTC+CGG 0.579752 7_2:+86369743 None:intergenic
GCTCAACAGACATAAATCCT+TGG 0.581775 7_2:+86368420 None:intergenic
CACATGCAGTTCTTGACTAG+TGG 0.586138 7_2:-86368515 Msa1085580:CDS
TTCCATAAGAGTTTACTGGT+TGG 0.588978 7_2:-86367710 Msa1085580:three_prime_UTR
ATGCAGTTCTTGACTAGTGG+TGG 0.590078 7_2:-86368512 Msa1085580:CDS
TCCCACAACAATCTTCCACT+TGG 0.590197 7_2:+86369085 None:intergenic
AATAGGGATTGATAACAAGA+TGG 0.591800 7_2:+86370324 None:intergenic
GAGACTTAACTACCTTCAAG+AGG 0.592693 7_2:+86369212 None:intergenic
GGCATCTATTCTAAAATGCA+AGG 0.596935 7_2:-86367654 Msa1085580:three_prime_UTR
CAAGCAAGAATATGAACCAA+TGG 0.597490 7_2:+86370357 None:intergenic
TGTTGATATCATTATAACAA+AGG 0.597794 7_2:+86368232 None:intergenic
TCGTCATTGGAGACTGGGGA+AGG 0.599769 7_2:-86369940 Msa1085580:CDS
TGGGGACTCTTGGTTGACTG+AGG 0.603490 7_2:-86367678 Msa1085580:three_prime_UTR
GTCCTGATCTAAATAAGTTG+GGG 0.608869 7_2:-86368272 Msa1085580:three_prime_UTR
ACACCTCCTGCCAATTCTTG+AGG 0.609620 7_2:-86369009 Msa1085580:intron
TCTTCAGCTACATCAATCAT+GGG 0.610082 7_2:+86368108 None:intergenic
GGAGGCTCAAAGGCATGGAA+AGG 0.610802 7_2:-86368491 Msa1085580:CDS
AGAAGGAATATTGAAAAGCA+GGG 0.612677 7_2:+86369700 None:intergenic
TGTATCCACGAAGAAGAACT+CGG 0.613760 7_2:+86369324 None:intergenic
CTACAGTGCAGTGTATGGAA+AGG 0.618957 7_2:+86367996 None:intergenic
GTCAAATCCGCATCTAAAGA+GGG 0.620588 7_2:-86368294 Msa1085580:three_prime_UTR
GGACTCTTGGTTGACTGAGG+CGG 0.623569 7_2:-86367675 Msa1085580:three_prime_UTR
GGCGGTGTAGATATCTGAGA+AGG 0.631188 7_2:+86369683 None:intergenic
TATATATTGAAGAGAAACCA+TGG 0.631434 7_2:-86367865 Msa1085580:three_prime_UTR
ATCATCCACTGAGAAGCATA+GGG 0.633029 7_2:-86369061 Msa1085580:CDS
CAAGTACTTTCTCAAGCCAA+AGG 0.638020 7_2:-86369287 Msa1085580:CDS
TTTACCGGAGATCAAACGCA+TGG 0.638708 7_2:-86367966 Msa1085580:three_prime_UTR
CACTAGTCAAGAACTGCATG+TGG 0.640187 7_2:+86368516 None:intergenic
CTGAGAAGCATAGGGCACCA+TGG 0.640827 7_2:-86369053 Msa1085580:CDS
TAAGAGATTCAACTTCCAAG+TGG 0.644464 7_2:-86369100 Msa1085580:CDS
TTGGAATCCATGGCCACAGG+GGG 0.651995 7_2:+86370059 None:intergenic
ACACAACAACATAACATGGG+TGG 0.658211 7_2:-86370106 Msa1085580:exon
CAATTAAATCTAGACTGTCG+AGG 0.660420 7_2:-86367547 Msa1085580:three_prime_UTR
TGGTGCCCTATGCTTCTCAG+TGG 0.661788 7_2:+86369056 None:intergenic
CTTGGAACACATAAGTAGCA+CGG 0.662651 7_2:-86368640 Msa1085580:CDS
ACAACACAACAACATAACAT+GGG 0.663500 7_2:-86370109 Msa1085580:exon
TTCCTCGTCATTGGAGACTG+GGG 0.664337 7_2:-86369944 Msa1085580:CDS
AAGAGCATAGACAGGAAGCG+CGG 0.664503 7_2:+86367466 None:intergenic
GATCACAAGTATGATTGGAG+AGG 0.668923 7_2:-86369265 Msa1085580:CDS
TTCCCCAGTCTCCAATGACG+AGG 0.673800 7_2:+86369942 None:intergenic
GAAAGACCAAGATACATGAA+CGG 0.676225 7_2:+86367620 None:intergenic
ATTGTCTATATATGACTCTG+TGG 0.681054 7_2:-86368147 Msa1085580:three_prime_UTR
ACTGGAATATATCCATACCA+TGG 0.686900 7_2:+86367848 None:intergenic
TGACCTCAAGAATTGGCAGG+AGG 0.696725 7_2:+86369006 None:intergenic
AATGACGAGGAAGCTAAGTG+TGG 0.707391 7_2:+86369955 None:intergenic
TTGGGCAACCATGACTACAG+AGG 0.718174 7_2:-86369531 Msa1085580:CDS
TTAAATCTAGACTGTCGAGG+TGG 0.719032 7_2:-86367544 Msa1085580:three_prime_UTR
AAATGTTCGAGCTTTACGGG+CGG 0.726001 7_2:-86367769 Msa1085580:three_prime_UTR
ATTGGAATCCATGGCCACAG+GGG 0.738974 7_2:+86370058 None:intergenic
ATGGCATGCATCATTCACCG+TGG 0.763567 7_2:+86370390 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAATAAAAATTCAGA+TGG - chr7_2:86368056-86368075 Msa1085580:three_prime_UTR 10.0%
!! ATTAAAATAAAAATTCAGAT+GGG - chr7_2:86368057-86368076 Msa1085580:three_prime_UTR 10.0%
!! AATAAATACATTCATAATTA+AGG + chr7_2:86369659-86369678 None:intergenic 10.0%
!! ATATAAACAAATTATGAATT+GGG + chr7_2:86369984-86370003 None:intergenic 10.0%
!! TATATAAACAAATTATGAAT+TGG + chr7_2:86369985-86370004 None:intergenic 10.0%
!!! CAAATTTCATTTTAAAATGA+GGG + chr7_2:86369160-86369179 None:intergenic 15.0%
!! TATGTTACCTTAATTTAAAT+TGG - chr7_2:86369260-86369279 Msa1085580:CDS 15.0%
!!! ATTTATTTTTTGAAAACTTC+TGG - chr7_2:86369672-86369691 Msa1085580:CDS 15.0%
!! ATATTGGTACATATAAATAT+AGG - chr7_2:86369793-86369812 Msa1085580:intron 15.0%
!!! TTACTTTTAATTCATAAAAC+TGG + chr7_2:86370037-86370056 None:intergenic 15.0%
!!! TTTTATGAATTAAAAGAGTT+GGG - chr7_2:86370071-86370090 Msa1085580:CDS 15.0%
!! TATATATAAGAAGTTGTGTT+GGG + chr7_2:86367675-86367694 None:intergenic 20.0%
!! ATATATATAAGAAGTTGTGT+TGG + chr7_2:86367676-86367695 None:intergenic 20.0%
!! TGTAAAAAAACTTGTCTTAA+AGG + chr7_2:86368017-86368036 None:intergenic 20.0%
!!! GATCAATATTTTGAAGAAAT+GGG + chr7_2:86368380-86368399 None:intergenic 20.0%
!!! TGATCAATATTTTGAAGAAA+TGG + chr7_2:86368381-86368400 None:intergenic 20.0%
!! TTCAAAATATTGATCATAGA+TGG - chr7_2:86368385-86368404 Msa1085580:CDS 20.0%
!! TGATAAGTTAGAATAATGAA+TGG + chr7_2:86368447-86368466 None:intergenic 20.0%
!! TTTGATAAATATTTCTTCCT+GGG + chr7_2:86368632-86368651 None:intergenic 20.0%
!!! TAGGACAGTATTTTTTAATT+GGG + chr7_2:86369090-86369109 None:intergenic 20.0%
!!! GCAAATTTCATTTTAAAATG+AGG + chr7_2:86369161-86369180 None:intergenic 20.0%
!!! CATTTTAAAATGAAATTTGC+AGG - chr7_2:86369161-86369180 Msa1085580:intron 20.0%
!! TGTTGATATCATTATAACAA+AGG + chr7_2:86369635-86369654 None:intergenic 20.0%
!!! GTTTTATGAATTAAAAGAGT+TGG - chr7_2:86370070-86370089 Msa1085580:CDS 20.0%
! AAACTTGTCTTAAAGGAATT+TGG + chr7_2:86368010-86368029 None:intergenic 25.0%
!!! CATTATACCATTGTTTTTGA+AGG + chr7_2:86368212-86368231 None:intergenic 25.0%
! CTTCAAAAACAATGGTATAA+TGG - chr7_2:86368210-86368229 Msa1085580:three_prime_UTR 25.0%
! AATTAGAAGAGTGAATGAAA+AGG + chr7_2:86368265-86368284 None:intergenic 25.0%
! TGTGAACAAAAAAAGATCTT+TGG + chr7_2:86368416-86368435 None:intergenic 25.0%
! GTTTGATAAATATTTCTTCC+TGG + chr7_2:86368633-86368652 None:intergenic 25.0%
! ATATTTATCAAACCTCTTGA+AGG - chr7_2:86368640-86368659 Msa1085580:CDS 25.0%
! TCTTAATAATTTCTGTGATG+AGG + chr7_2:86368677-86368696 None:intergenic 25.0%
! AACTAGCACTCAAATTAAAA+AGG - chr7_2:86368893-86368912 Msa1085580:intron 25.0%
! ACTAGCACTCAAATTAAAAA+GGG - chr7_2:86368894-86368913 Msa1085580:intron 25.0%
!! TGACTTAAAATTTCCACTTT+TGG - chr7_2:86369025-86369044 Msa1085580:CDS 25.0%
!!! GTAGGACAGTATTTTTTAAT+TGG + chr7_2:86369091-86369110 None:intergenic 25.0%
! TCCTACTAGTTATAAAGATA+AGG - chr7_2:86369105-86369124 Msa1085580:CDS 25.0%
! ACCTTATCTTTATAACTAGT+AGG + chr7_2:86369109-86369128 None:intergenic 25.0%
! GGATGTTTATCAGTAAATAA+AGG + chr7_2:86369139-86369158 None:intergenic 25.0%
! AATGTTGATATGTACATGAA+TGG - chr7_2:86369189-86369208 Msa1085580:intron 25.0%
! ATGTTGATATGTACATGAAT+GGG - chr7_2:86369190-86369209 Msa1085580:intron 25.0%
! AGCAAGTCCAATTTAAATTA+AGG + chr7_2:86369270-86369289 None:intergenic 25.0%
! AAAACCACTCAATTTCATTA+AGG + chr7_2:86369324-86369343 None:intergenic 25.0%
! TTGATAAAAATAGGAGAGAT+GGG - chr7_2:86369401-86369420 Msa1085580:intron 25.0%
! AATATCGTAATAGACAACTT+TGG + chr7_2:86369485-86369504 None:intergenic 25.0%
!! GTTGTCTATTACGATATTTT+TGG - chr7_2:86369487-86369506 Msa1085580:CDS 25.0%
! TACATTATGCGATATAAGTA+AGG - chr7_2:86369545-86369564 Msa1085580:intron 25.0%
! TATATATTGAAGAGAAACCA+TGG - chr7_2:86369999-86370018 Msa1085580:CDS 25.0%
!! TTACTGGTTGGTATTAATAT+TGG - chr7_2:86370166-86370185 Msa1085580:five_prime_UTR 25.0%
!! TACTGGTTGGTATTAATATT+GGG - chr7_2:86370167-86370186 Msa1085580:five_prime_UTR 25.0%
! GATTTAATTGTAGACATGAT+AGG + chr7_2:86370307-86370326 None:intergenic 25.0%
AACCAATGGTATGAGATATA+TGG + chr7_2:86367496-86367515 None:intergenic 30.0%
! AATAGGGATTGATAACAAGA+TGG + chr7_2:86367543-86367562 None:intergenic 30.0%
! ATCTTGTTATCAATCCCTAT+TGG - chr7_2:86367542-86367561 Msa1085580:three_prime_UTR 30.0%
GAAAAATGTTGTAGCCAATA+GGG + chr7_2:86367559-86367578 None:intergenic 30.0%
AGAAAAATGTTGTAGCCAAT+AGG + chr7_2:86367560-86367579 None:intergenic 30.0%
TACAATACAAGCTGGATTAA+TGG - chr7_2:86367616-86367635 Msa1085580:three_prime_UTR 30.0%
TACAACACAACAACATAACA+TGG - chr7_2:86367754-86367773 Msa1085580:three_prime_UTR 30.0%
ACAACACAACAACATAACAT+GGG - chr7_2:86367755-86367774 Msa1085580:three_prime_UTR 30.0%
!! CAAGTTAAACATTGACTTTG+TGG - chr7_2:86368092-86368111 Msa1085580:three_prime_UTR 30.0%
AGAAGGAATATTGAAAAGCA+GGG + chr7_2:86368167-86368186 None:intergenic 30.0%
!!! AGATCTTTTTTTGTTCACAC+TGG - chr7_2:86368417-86368436 Msa1085580:CDS 30.0%
CATGTACATATCAACATTGT+TGG + chr7_2:86369187-86369206 None:intergenic 30.0%
ATCACCTTAATGAAATTGAG+TGG - chr7_2:86369317-86369336 Msa1085580:CDS 30.0%
! AAGGAGACGTTGATAAAAAT+AGG - chr7_2:86369392-86369411 Msa1085580:intron 30.0%
! GTTGATAAAAATAGGAGAGA+TGG - chr7_2:86369400-86369419 Msa1085580:intron 30.0%
TGATAAAAATAGGAGAGATG+GGG - chr7_2:86369402-86369421 Msa1085580:intron 30.0%
ATTGTCTATATATGACTCTG+TGG - chr7_2:86369717-86369736 Msa1085580:CDS 30.0%
GAATTTCCATAAGAGTTTAC+TGG - chr7_2:86370150-86370169 Msa1085580:five_prime_UTR 30.0%
! ACTGGTTGGTATTAATATTG+GGG - chr7_2:86370168-86370187 Msa1085580:five_prime_UTR 30.0%
!! TCTATTCTAAAATGCAAGGT+TGG - chr7_2:86370214-86370233 Msa1085580:five_prime_UTR 30.0%
!! CTATTCTAAAATGCAAGGTT+GGG - chr7_2:86370215-86370234 Msa1085580:five_prime_UTR 30.0%
AAAATTCCGTTCATGTATCT+TGG - chr7_2:86370238-86370257 Msa1085580:intron 30.0%
TGCCATATATCTCATACCAT+TGG - chr7_2:86367491-86367510 Msa1085580:three_prime_UTR 35.0%
CAAGCAAGAATATGAACCAA+TGG + chr7_2:86367510-86367529 None:intergenic 35.0%
GATAACAAGATGGATGGAAA+GGG + chr7_2:86367533-86367552 None:intergenic 35.0%
TGATAACAAGATGGATGGAA+AGG + chr7_2:86367534-86367553 None:intergenic 35.0%
CCAGCTTGTATTGTAATTGT+AGG + chr7_2:86367611-86367630 None:intergenic 35.0%
CCTACAATTACAATACAAGC+TGG - chr7_2:86367608-86367627 Msa1085580:three_prime_UTR 35.0%
ATAATAGACCCCAACCAAAA+AGG + chr7_2:86367712-86367731 None:intergenic 35.0%
CAGATGTAAATTGGAATCCA+TGG + chr7_2:86367818-86367837 None:intergenic 35.0%
CACACAACACAGATGTAAAT+TGG + chr7_2:86367827-86367846 None:intergenic 35.0%
AAAAATTCAGATGGGAAGAG+TGG - chr7_2:86368065-86368084 Msa1085580:three_prime_UTR 35.0%
! ATTGACTTTGTGGTATCAAC+CGG - chr7_2:86368102-86368121 Msa1085580:three_prime_UTR 35.0%
ATCGTCATAGAAATTGTCTC+CGG + chr7_2:86368124-86368143 None:intergenic 35.0%
GAGAAGGAATATTGAAAAGC+AGG + chr7_2:86368168-86368187 None:intergenic 35.0%
!!! GATCTGCTTGTTTTAGTGTT+GGG - chr7_2:86368315-86368334 Msa1085580:exon 35.0%
TGAATGATTATGCGGAGATA+GGG + chr7_2:86368483-86368502 None:intergenic 35.0%
TATCTCCGCATAATCATTCA+CGG - chr7_2:86368483-86368502 Msa1085580:CDS 35.0%
AAGAACCGTGAATGATTATG+CGG + chr7_2:86368491-86368510 None:intergenic 35.0%
!! AGAAAGTACTTGTCCACAAA+AGG + chr7_2:86368569-86368588 None:intergenic 35.0%
CAATCATACTTGTGATCCTT+TGG + chr7_2:86368596-86368615 None:intergenic 35.0%
CAAAGGATCACAAGTATGAT+TGG - chr7_2:86368594-86368613 Msa1085580:intron 35.0%
ATGTGTGTGATTCTAAACGA+AGG - chr7_2:86368726-86368745 Msa1085580:intron 35.0%
TAAGAGATTCAACTTCCAAG+TGG - chr7_2:86368764-86368783 Msa1085580:intron 35.0%
TAATGAGTGACCTCAAGAAT+TGG + chr7_2:86368868-86368887 None:intergenic 35.0%
!! GCATGTTTTGAATCTATCCA+AGG - chr7_2:86369519-86369538 Msa1085580:CDS 35.0%
TATCGCATAATGTAACTCCT+TGG + chr7_2:86369539-86369558 None:intergenic 35.0%
GGTCCTGATCTAAATAAGTT+GGG - chr7_2:86369591-86369610 Msa1085580:intron 35.0%
GTCCTGATCTAAATAAGTTG+GGG - chr7_2:86369592-86369611 Msa1085580:intron 35.0%
TTCCCCAACTTATTTAGATC+AGG + chr7_2:86369597-86369616 None:intergenic 35.0%
TTGGGGAAAATTGTGAAATC+TGG - chr7_2:86369609-86369628 Msa1085580:intron 35.0%
TCTTCAGCTACATCAATCAT+GGG + chr7_2:86369759-86369778 None:intergenic 35.0%
!! GAGTGAAGACTTTAGGATAT+TGG - chr7_2:86369777-86369796 Msa1085580:CDS 35.0%
CACTGTAGCTGAATATTTAC+CGG - chr7_2:86369883-86369902 Msa1085580:intron 35.0%
ATTGAAGAGAAACCATGGTA+TGG - chr7_2:86370004-86370023 Msa1085580:CDS 35.0%
ACTGGAATATATCCATACCA+TGG + chr7_2:86370019-86370038 None:intergenic 35.0%
TTCCATAAGAGTTTACTGGT+TGG - chr7_2:86370154-86370173 Msa1085580:five_prime_UTR 35.0%
TACCAACCAGTAAACTCTTA+TGG + chr7_2:86370159-86370178 None:intergenic 35.0%
GTATTAATATTGGGGACTCT+TGG - chr7_2:86370176-86370195 Msa1085580:five_prime_UTR 35.0%
!! GGCATCTATTCTAAAATGCA+AGG - chr7_2:86370210-86370229 Msa1085580:five_prime_UTR 35.0%
GAAAGACCAAGATACATGAA+CGG + chr7_2:86370247-86370266 None:intergenic 35.0%
! ATGTATCTTGGTCTTTCGAT+TGG - chr7_2:86370250-86370269 Msa1085580:intron 35.0%
! ATCCTCGAAGGTTATCTTTT+TGG - chr7_2:86370278-86370297 Msa1085580:five_prime_UTR 35.0%
! TCCTCGAAGGTTATCTTTTT+GGG - chr7_2:86370279-86370298 Msa1085580:five_prime_UTR 35.0%
CAATTAAATCTAGACTGTCG+AGG - chr7_2:86370317-86370336 Msa1085580:five_prime_UTR 35.0%
! AGAGTCGTTTCCTATCTTTT+GGG - chr7_2:86370344-86370363 Msa1085580:five_prime_UTR 35.0%
! GGGATTGATAACAAGATGGA+TGG + chr7_2:86367539-86367558 None:intergenic 40.0%
! TACCTAGTGTAGTGCCTTTT+TGG - chr7_2:86367695-86367714 Msa1085580:three_prime_UTR 40.0%
!! AACCAAAAAGGCACTACACT+AGG + chr7_2:86367700-86367719 None:intergenic 40.0%
!! TAGTGTAGTGCCTTTTTGGT+TGG - chr7_2:86367699-86367718 Msa1085580:three_prime_UTR 40.0%
!!! AGTGTAGTGCCTTTTTGGTT+GGG - chr7_2:86367700-86367719 Msa1085580:three_prime_UTR 40.0%
ACACAACAACATAACATGGG+TGG - chr7_2:86367758-86367777 Msa1085580:three_prime_UTR 40.0%
CAACATAACATGGGTGGTTT+AGG - chr7_2:86367764-86367783 Msa1085580:three_prime_UTR 40.0%
GGAGACAATTTCTATGACGA+TGG - chr7_2:86368123-86368142 Msa1085580:three_prime_UTR 40.0%
!! TTCTATGACGATGGATTGAC+TGG - chr7_2:86368132-86368151 Msa1085580:three_prime_UTR 40.0%
!!! TTGTTTTTGAAGGCTGTTGG+CGG + chr7_2:86368202-86368221 None:intergenic 40.0%
!!! CCATTGTTTTTGAAGGCTGT+TGG + chr7_2:86368205-86368224 None:intergenic 40.0%
CCAACAGCCTTCAAAAACAA+TGG - chr7_2:86368202-86368221 Msa1085580:three_prime_UTR 40.0%
!!! CGATCTGCTTGTTTTAGTGT+TGG - chr7_2:86368314-86368333 Msa1085580:exon 40.0%
GAATGATTATGCGGAGATAG+GGG + chr7_2:86368482-86368501 None:intergenic 40.0%
GTGAATGATTATGCGGAGAT+AGG + chr7_2:86368484-86368503 None:intergenic 40.0%
TGTATCCACGAAGAAGAACT+CGG + chr7_2:86368543-86368562 None:intergenic 40.0%
CAAGTACTTTCTCAAGCCAA+AGG - chr7_2:86368577-86368596 Msa1085580:intron 40.0%
GATCACAAGTATGATTGGAG+AGG - chr7_2:86368599-86368618 Msa1085580:intron 40.0%
GAGACTTAACTACCTTCAAG+AGG + chr7_2:86368655-86368674 None:intergenic 40.0%
!! AATCTCTTAGTGCTGTTTCG+AGG + chr7_2:86368753-86368772 None:intergenic 40.0%
TTCCAAGTGGAAGATTGTTG+TGG - chr7_2:86368777-86368796 Msa1085580:intron 40.0%
TCCAAGTGGAAGATTGTTGT+GGG - chr7_2:86368778-86368797 Msa1085580:intron 40.0%
! ATCATCCACTGAGAAGCATA+GGG - chr7_2:86368803-86368822 Msa1085580:intron 40.0%
TACTTATGTGTTCCAAGCAG+TGG + chr7_2:86369221-86369240 None:intergenic 40.0%
CTTGGAACACATAAGTAGCA+CGG - chr7_2:86369224-86369243 Msa1085580:intron 40.0%
! GGGGTCAAGTTTTACTATGA+CGG - chr7_2:86369421-86369440 Msa1085580:intron 40.0%
! AAGTTTTACTATGACGGCCA+AGG - chr7_2:86369427-86369446 Msa1085580:intron 40.0%
GCTCAACAGACATAAATCCT+TGG + chr7_2:86369447-86369466 None:intergenic 40.0%
TGTCAAATCCGCATCTAAAG+AGG - chr7_2:86369569-86369588 Msa1085580:intron 40.0%
GTCAAATCCGCATCTAAAGA+GGG - chr7_2:86369570-86369589 Msa1085580:intron 40.0%
GGGTCCTGATCTAAATAAGT+TGG - chr7_2:86369590-86369609 Msa1085580:intron 40.0%
GCTACATCAATCATGGGAAT+TGG + chr7_2:86369753-86369772 None:intergenic 40.0%
CTCTTCAGCTACATCAATCA+TGG + chr7_2:86369760-86369779 None:intergenic 40.0%
AGCTGAAGAGTGAAGACTTT+AGG - chr7_2:86369770-86369789 Msa1085580:CDS 40.0%
! TATCTTGGTCTTTCGATTGG+TGG - chr7_2:86370253-86370272 Msa1085580:intron 40.0%
TCCCAAAAAGATAACCTTCG+AGG + chr7_2:86370283-86370302 None:intergenic 40.0%
TTAAATCTAGACTGTCGAGG+TGG - chr7_2:86370320-86370339 Msa1085580:five_prime_UTR 40.0%
! CAGAGTCGTTTCCTATCTTT+TGG - chr7_2:86370343-86370362 Msa1085580:five_prime_UTR 40.0%
! GAGTCGTTTCCTATCTTTTG+GGG - chr7_2:86370345-86370364 Msa1085580:five_prime_UTR 40.0%
! AGTCGTTTCCTATCTTTTGG+GGG - chr7_2:86370346-86370365 Msa1085580:five_prime_UTR 40.0%
!!! GTGTAGTGCCTTTTTGGTTG+GGG - chr7_2:86367701-86367720 Msa1085580:three_prime_UTR 45.0%
AATTGGAATCCATGGCCACA+GGG + chr7_2:86367810-86367829 None:intergenic 45.0%
AAATTGGAATCCATGGCCAC+AGG + chr7_2:86367811-86367830 None:intergenic 45.0%
AATGACGAGGAAGCTAAGTG+TGG + chr7_2:86367912-86367931 None:intergenic 45.0%
ACACTTAGCTTCCTCGTCAT+TGG - chr7_2:86367911-86367930 Msa1085580:three_prime_UTR 45.0%
! AGCAACTTGAGACTGGTTGT+AGG + chr7_2:86367957-86367976 None:intergenic 45.0%
CCTGAAAAGCAACTTGAGAC+TGG + chr7_2:86367964-86367983 None:intergenic 45.0%
!!! CCAGTCTCAAGTTGCTTTTC+AGG - chr7_2:86367961-86367980 Msa1085580:three_prime_UTR 45.0%
CAACATCTCCTCTGTAGTCA+TGG + chr7_2:86368344-86368363 None:intergenic 45.0%
AATTGCCGAGTTCTTCTTCG+TGG - chr7_2:86368535-86368554 Msa1085580:intron 45.0%
! CGTGGATACAACTCCTTTTG+TGG - chr7_2:86368553-86368572 Msa1085580:intron 45.0%
TCCCACAACAATCTTCCACT+TGG + chr7_2:86368782-86368801 None:intergenic 45.0%
! CATCATCCACTGAGAAGCAT+AGG - chr7_2:86368802-86368821 Msa1085580:intron 45.0%
GAGGTGTGTTAAGAGCTCTT+TGG + chr7_2:86368842-86368861 None:intergenic 45.0%
CTGGTTAAGGAAGCCAAAAG+TGG + chr7_2:86369041-86369060 None:intergenic 45.0%
AACACATAAGTAGCACGGAC+AGG - chr7_2:86369229-86369248 Msa1085580:CDS 45.0%
CACTAGTCAAGAACTGCATG+TGG + chr7_2:86369351-86369370 None:intergenic 45.0%
CACATGCAGTTCTTGACTAG+TGG - chr7_2:86369349-86369368 Msa1085580:intron 45.0%
ATGCAGTTCTTGACTAGTGG+TGG - chr7_2:86369352-86369371 Msa1085580:intron 45.0%
ATCAGGACCCTCTTTAGATG+CGG + chr7_2:86369580-86369599 None:intergenic 45.0%
!! ATAAGCGCAGAAGCGTTCTT+TGG + chr7_2:86369699-86369718 None:intergenic 45.0%
CTACAGTGCAGTGTATGGAA+AGG + chr7_2:86369871-86369890 None:intergenic 45.0%
TTCAGCTACAGTGCAGTGTA+TGG + chr7_2:86369876-86369895 None:intergenic 45.0%
TTTACCGGAGATCAAACGCA+TGG - chr7_2:86369898-86369917 Msa1085580:intron 45.0%
GGGCAAATGTTCGAGCTTTA+CGG - chr7_2:86370091-86370110 Msa1085580:CDS 45.0%
GGCAAATGTTCGAGCTTTAC+GGG - chr7_2:86370092-86370111 Msa1085580:CDS 45.0%
AAATGTTCGAGCTTTACGGG+CGG - chr7_2:86370095-86370114 Msa1085580:exon 45.0%
!! GTTTCCTATCTTTTGGGGGT+CGG - chr7_2:86370350-86370369 Msa1085580:five_prime_UTR 45.0%
!! TTAATAAATAATGATAAAAA+TGG + chr7_2:86368042-86368061 None:intergenic 5.0%
!! TTAAAATTAATAAAATCATA+TGG - chr7_2:86369816-86369835 Msa1085580:intron 5.0%
ATGGCATGCATCATTCACCG+TGG + chr7_2:86367477-86367496 None:intergenic 50.0%
ATTGGAATCCATGGCCACAG+GGG + chr7_2:86367809-86367828 None:intergenic 50.0%
TGGCATCTGCTTTGACAGCA+GGG + chr7_2:86367892-86367911 None:intergenic 50.0%
CTTCCTCGTCATTGGAGACT+GGG - chr7_2:86367919-86367938 Msa1085580:three_prime_UTR 50.0%
TTCCTCGTCATTGGAGACTG+GGG - chr7_2:86367920-86367939 Msa1085580:three_prime_UTR 50.0%
ATTGGAGACTGGGGAAGGAA+AGG - chr7_2:86367929-86367948 Msa1085580:three_prime_UTR 50.0%
GGCGGTGTAGATATCTGAGA+AGG + chr7_2:86368184-86368203 None:intergenic 50.0%
TTGGGCAACCATGACTACAG+AGG - chr7_2:86368333-86368352 Msa1085580:CDS 50.0%
! ATTGGAGAGGTGTACTTCCC+AGG - chr7_2:86368612-86368631 Msa1085580:intron 50.0%
ACACCTCCTGCCAATTCTTG+AGG - chr7_2:86368855-86368874 Msa1085580:intron 50.0%
TGACCTCAAGAATTGGCAGG+AGG + chr7_2:86368861-86368880 None:intergenic 50.0%
GAGTGACCTCAAGAATTGGC+AGG + chr7_2:86368864-86368883 None:intergenic 50.0%
GAAATGTTAACCAGTGCCCC+CGG - chr7_2:86368916-86368935 Msa1085580:intron 50.0%
AAATGTTAACCAGTGCCCCC+GGG - chr7_2:86368917-86368936 Msa1085580:intron 50.0%
TAACTCCTTAACCAGTGCCC+CGG + chr7_2:86368938-86368957 None:intergenic 50.0%
CATAAGTAGCACGGACAGGT+AGG - chr7_2:86369233-86369252 Msa1085580:CDS 50.0%
CAGTTCTTGACTAGTGGTGG+AGG - chr7_2:86369355-86369374 Msa1085580:intron 50.0%
GAAGCCATGCGTTTGATCTC+CGG + chr7_2:86369905-86369924 None:intergenic 50.0%
! CGGTTAGGACGGACTTAAGA+AGG + chr7_2:86370381-86370400 None:intergenic 50.0%
TTGGAATCCATGGCCACAGG+GGG + chr7_2:86367808-86367827 None:intergenic 55.0%
GTGGCATCTGCTTTGACAGC+AGG + chr7_2:86367893-86367912 None:intergenic 55.0%
GCTTCCTCGTCATTGGAGAC+TGG - chr7_2:86367918-86367937 Msa1085580:three_prime_UTR 55.0%
TTCCCCAGTCTCCAATGACG+AGG + chr7_2:86367925-86367944 None:intergenic 55.0%
TCGTCATTGGAGACTGGGGA+AGG - chr7_2:86367924-86367943 Msa1085580:three_prime_UTR 55.0%
TGGTGCCCTATGCTTCTCAG+TGG + chr7_2:86368811-86368830 None:intergenic 55.0%
! CTGAGAAGCATAGGGCACCA+TGG - chr7_2:86368811-86368830 Msa1085580:intron 55.0%
!! AGAGCTCTTTGGTGTCGCCA+TGG + chr7_2:86368831-86368850 None:intergenic 55.0%
AATGTTAACCAGTGCCCCCG+GGG - chr7_2:86368918-86368937 Msa1085580:intron 55.0%
AACTCCTTAACCAGTGCCCC+GGG + chr7_2:86368937-86368956 None:intergenic 55.0%
TCATGTTAACCAGTGCCCCC+GGG + chr7_2:86369067-86369086 None:intergenic 55.0%
GTCATGTTAACCAGTGCCCC+CGG + chr7_2:86369068-86369087 None:intergenic 55.0%
! GACTAGTGGTGGAGGCTCAA+AGG - chr7_2:86369363-86369382 Msa1085580:intron 55.0%
! GGAGGCTCAAAGGCATGGAA+AGG - chr7_2:86369373-86369392 Msa1085580:intron 55.0%
TGGGGACTCTTGGTTGACTG+AGG - chr7_2:86370186-86370205 Msa1085580:five_prime_UTR 55.0%
GGACTCTTGGTTGACTGAGG+CGG - chr7_2:86370189-86370208 Msa1085580:five_prime_UTR 55.0%
!! CGATTGGTGGTGATCCTCGA+AGG - chr7_2:86370266-86370285 Msa1085580:intron 55.0%
CCAACCGACCCCCAAAAGAT+AGG + chr7_2:86370357-86370376 None:intergenic 55.0%
!! CCTATCTTTTGGGGGTCGGT+TGG - chr7_2:86370354-86370373 Msa1085580:five_prime_UTR 55.0%
! CATAGACAGGAAGCGCGGTT+AGG + chr7_2:86370396-86370415 None:intergenic 55.0%
CAAGTAGCCTAAGCCCCCTG+TGG - chr7_2:86367792-86367811 Msa1085580:three_prime_UTR 60.0%
! CAGCAGGGTGCTCAATGCGT+TGG + chr7_2:86367877-86367896 None:intergenic 60.0%
ACTCCTTAACCAGTGCCCCG+GGG + chr7_2:86368936-86368955 None:intergenic 60.0%
GGCTTCCTTAACCAGTGCCC+CGG - chr7_2:86369046-86369065 Msa1085580:CDS 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr7_2:86369047-86369066 Msa1085580:CDS 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr7_2:86369048-86369067 Msa1085580:CDS 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - chr7_2:86369049-86369068 Msa1085580:CDS 60.0%
CATGTTAACCAGTGCCCCCG+GGG + chr7_2:86369066-86369085 None:intergenic 60.0%
GAATGGGCACGACCACTGCT+TGG - chr7_2:86369206-86369225 Msa1085580:intron 60.0%
! GTGGTGGAGGCTCAAAGGCA+TGG - chr7_2:86369368-86369387 Msa1085580:intron 60.0%
! GACAGGAAGCGCGGTTAGGA+CGG + chr7_2:86370392-86370411 None:intergenic 60.0%
TCCATGGCCACAGGGGGCTT+AGG + chr7_2:86367802-86367821 None:intergenic 65.0%
CTCCTTAACCAGTGCCCCGG+GGG + chr7_2:86368935-86368954 None:intergenic 65.0%
GCCTAAGCCCCCTGTGGCCA+TGG - chr7_2:86367798-86367817 Msa1085580:three_prime_UTR 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr7_2:86368930-86368949 Msa1085580:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr7_2:86368930-86368949 None:intergenic 70.0%
AACCAGTGCCCCCGGGGCAC+TGG - chr7_2:86368924-86368943 Msa1085580:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG + chr7_2:86369055-86369074 None:intergenic 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr7_2:86369055-86369074 Msa1085580:CDS 75.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr7_2:86368924-86368943 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 86367470 86370416 86367470 ID=Msa1085580;Name=Msa1085580
chr7_2 mRNA 86367470 86370416 86367470 ID=Msa1085580-mRNA-1;Parent=Msa1085580;Name=Msa1085580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=282|1|1|1|0.85|0.75|8|855|337
chr7_2 exon 86367470 86368538 86367470 ID=Msa1085580-mRNA-1:exon:23378;Parent=Msa1085580-mRNA-1
chr7_2 exon 86368636 86368703 86368636 ID=Msa1085580-mRNA-1:exon:23377;Parent=Msa1085580-mRNA-1
chr7_2 exon 86369010 86369138 86369010 ID=Msa1085580-mRNA-1:exon:23376;Parent=Msa1085580-mRNA-1
chr7_2 exon 86369225 86369352 86369225 ID=Msa1085580-mRNA-1:exon:23375;Parent=Msa1085580-mRNA-1
chr7_2 exon 86369448 86369555 86369448 ID=Msa1085580-mRNA-1:exon:23374;Parent=Msa1085580-mRNA-1
chr7_2 exon 86369655 86369811 86369655 ID=Msa1085580-mRNA-1:exon:23373;Parent=Msa1085580-mRNA-1
chr7_2 exon 86369904 86370245 86369904 ID=Msa1085580-mRNA-1:exon:23372;Parent=Msa1085580-mRNA-1
chr7_2 exon 86370267 86370416 86370267 ID=Msa1085580-mRNA-1:exon:23371;Parent=Msa1085580-mRNA-1
chr7_2 five_prime_UTR 86370267 86370416 86370267 ID=Msa1085580-mRNA-1:five_prime_utr;Parent=Msa1085580-mRNA-1
chr7_2 five_prime_UTR 86370114 86370245 86370114 ID=Msa1085580-mRNA-1:five_prime_utr;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86369904 86370113 86369904 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86369655 86369811 86369655 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86369448 86369555 86369448 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86369225 86369352 86369225 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86369010 86369138 86369010 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86368636 86368703 86368636 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 CDS 86368325 86368538 86368325 ID=Msa1085580-mRNA-1:cds;Parent=Msa1085580-mRNA-1
chr7_2 three_prime_UTR 86367470 86368324 86367470 ID=Msa1085580-mRNA-1:three_prime_utr;Parent=Msa1085580-mRNA-1
Gene Sequence

>Msa1085580

ATGGGTGGTTTAGGAAGAACAAGTAGCCTAAGCCCCCTGTGGCCATGGATTCCAATTTACATCTGTGTTGTGTGTGTAAGTGTAAATGTATCAGCTGAGCTCCAACGCATTGAGCACCCTGCTGTCAAAGCAGATGCCACACTTAGCTTCCTCGTCATTGGAGACTGGGGAAGGAAAGGAACCTACAACCAGTCTCAAGTTGCTTTTCAGATGGGAAGAGTGGCTGACAAGTTAAACATTGACTTTGTGGTATCAACCGGAGACAATTTCTATGACGATGGATTGACTGGTGTACATGACCCTGCTTTTCAATATTCCTTCTCAGATATCTACACCGCCAACAGCCTTCAAAAACAATGGTATAATGTGTTGGGCAACCATGACTACAGAGGAGATGTTGAAGCTCAATTAAGCCCATTTCTTCAAAATATTGATCATAGATGGTTTTGCCAAAGATCTTTTTTTGTTCACACTGAAATTGCCGAGTTCTTCTTCGTGGATACAACTCCTTTTGTGGACAAGTACTTTCTCAAGCCAAAGGATCACAAGTATGATTGGAGAGGTGTACTTCCCAGGAAGAAATATTTATCAAACCTCTTGAAGGACCTCGAAACAGCACTAAGAGATTCAACTTCCAAGTGGAAGATTGTTGTGGGACATCATCCACTGAGAAGCATAGGGCACCATGGCGACACCAAAGAGCTCTTAACACACCTCCTGCCAATTCTTGAGGCCAACAATGTTGATATGTACATGAATGGGCACGACCACTGCTTGGAACACATAAGTAGCACGGACAGCCACATGCAGTTCTTGACTAGTGGTGGAGGCTCAAAGGCATGGAAAGGAGACGTTGATAAAAATAGGAGAGATGGGGTCAAGTTTTACTATGACGGCCAAGGATTTATGTCTGTTGAGCTTGAGCAAATGAATGCCAAAGTTGTCTATTACGATATTTTTGGCAATGTTTTGCATGTTTTGAATCTATCCAAGGAGTTACATTATGCGATATAA

Protein sequence

>Msa1085580

MGGLGRTSSLSPLWPWIPIYICVVCVSVNVSAELQRIEHPAVKADATLSFLVIGDWGRKGTYNQSQVAFQMGRVADKLNIDFVVSTGDNFYDDGLTGVHDPAFQYSFSDIYTANSLQKQWYNVLGNHDYRGDVEAQLSPFLQNIDHRWFCQRSFFVHTEIAEFFFVDTTPFVDKYFLKPKDHKYDWRGVLPRKKYLSNLLKDLETALRDSTSKWKIVVGHHPLRSIGHHGDTKELLTHLLPILEANNVDMYMNGHDHCLEHISSTDSHMQFLTSGGGSKAWKGDVDKNRRDGVKFYYDGQGFMSVELEQMNAKVVYYDIFGNVLHVLNLSKELHYAI*