Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200320 | G7L7V0 | 90.625 | 160 | 4 | 3 | 1 | 149 | 1 | 160 | 1.55e-45 | 157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa1200320 | 0.822757 | 1.997253e-53 | -8.615850e-47 |
| Msa0008840 | Msa1200320 | 0.830239 | 3.284093e-55 | -8.615850e-47 |
| Msa0010490 | Msa1200320 | 0.830877 | 2.292444e-55 | -8.615850e-47 |
| Msa0010500 | Msa1200320 | 0.842061 | 3.253737e-58 | -8.615850e-47 |
| Msa0016510 | Msa1200320 | 0.802172 | 6.363935e-49 | -8.615850e-47 |
| Msa0020390 | Msa1200320 | 0.840721 | 7.330895e-58 | -8.615850e-47 |
| Msa0029260 | Msa1200320 | 0.820375 | 7.091139e-53 | -8.615850e-47 |
| Msa0036540 | Msa1200320 | 0.820859 | 5.490770e-53 | -8.615850e-47 |
| Msa0038870 | Msa1200320 | 0.818904 | 1.536559e-52 | -8.615850e-47 |
| Msa0052300 | Msa1200320 | -0.812069 | 5.103617e-51 | -8.615850e-47 |
| Msa0052350 | Msa1200320 | -0.843871 | 1.072957e-58 | -8.615850e-47 |
| Msa0057750 | Msa1200320 | 0.802730 | 4.883153e-49 | -8.615850e-47 |
| Msa0059950 | Msa1200320 | 0.807134 | 5.862670e-50 | -8.615850e-47 |
| Msa0068020 | Msa1200320 | 0.815228 | 1.029600e-51 | -8.615850e-47 |
| Msa0074750 | Msa1200320 | 0.807589 | 4.695127e-50 | -8.615850e-47 |
| Msa0079230 | Msa1200320 | 0.800671 | 1.292032e-48 | -8.615850e-47 |
| Msa0093010 | Msa1200320 | 0.824079 | 9.801866e-54 | -8.615850e-47 |
| Msa0093420 | Msa1200320 | 0.824566 | 7.528713e-54 | -8.615850e-47 |
| Msa0095360 | Msa1200320 | 0.830179 | 3.398133e-55 | -8.615850e-47 |
| Msa0095770 | Msa1200320 | 0.839764 | 1.303317e-57 | -8.615850e-47 |
| Msa0097360 | Msa1200320 | -0.821634 | 3.636944e-53 | -8.615850e-47 |
| Msa0101180 | Msa1200320 | 0.803555 | 3.296716e-49 | -8.615850e-47 |
| Msa0103070 | Msa1200320 | 0.808164 | 3.543732e-50 | -8.615850e-47 |
| Msa0103790 | Msa1200320 | 0.848123 | 7.488000e-60 | -8.615850e-47 |
| Msa0118540 | Msa1200320 | 0.848555 | 5.687410e-60 | -8.615850e-47 |
| Msa0119440 | Msa1200320 | 0.824739 | 6.856002e-54 | -8.615850e-47 |
| Msa0603570 | Msa1200320 | 0.801923 | 7.161344e-49 | -8.615850e-47 |
| Msa0609000 | Msa1200320 | 0.810050 | 1.397588e-50 | -8.615850e-47 |
| Msa0609220 | Msa1200320 | 0.850130 | 2.072147e-60 | -8.615850e-47 |
| Msa0610390 | Msa1200320 | 0.805267 | 1.449995e-49 | -8.615850e-47 |
| Msa0612720 | Msa1200320 | 0.833846 | 4.217290e-56 | -8.615850e-47 |
| Msa0615680 | Msa1200320 | 0.861782 | 8.054242e-64 | -8.615850e-47 |
| Msa0617260 | Msa1200320 | 0.802023 | 6.827904e-49 | -8.615850e-47 |
| Msa0618930 | Msa1200320 | 0.813069 | 3.085279e-51 | -8.615850e-47 |
| Msa0620330 | Msa1200320 | 0.826263 | 2.986081e-54 | -8.615850e-47 |
| Msa0626940 | Msa1200320 | 0.818857 | 1.574482e-52 | -8.615850e-47 |
| Msa0631350 | Msa1200320 | 0.807658 | 4.539309e-50 | -8.615850e-47 |
| Msa0640940 | Msa1200320 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0642970 | Msa1200320 | 0.809972 | 1.452764e-50 | -8.615850e-47 |
| Msa0651930 | Msa1200320 | 0.804749 | 1.860469e-49 | -8.615850e-47 |
| Msa0654620 | Msa1200320 | 0.816123 | 6.503580e-52 | -8.615850e-47 |
| Msa0659140 | Msa1200320 | 0.812408 | 4.304405e-51 | -8.615850e-47 |
| Msa0659790 | Msa1200320 | 0.808321 | 3.279517e-50 | -8.615850e-47 |
| Msa0662630 | Msa1200320 | 0.828072 | 1.101511e-54 | -8.615850e-47 |
| Msa0665080 | Msa1200320 | 0.807233 | 5.587759e-50 | -8.615850e-47 |
| Msa0669720 | Msa1200320 | 0.848129 | 7.461011e-60 | -8.615850e-47 |
| Msa0679360 | Msa1200320 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0682680 | Msa1200320 | 0.833679 | 4.644119e-56 | -8.615850e-47 |
| Msa0683600 | Msa1200320 | 0.801623 | 8.251331e-49 | -8.615850e-47 |
| Msa0689320 | Msa1200320 | 0.806687 | 7.287670e-50 | -8.615850e-47 |
| Msa0693210 | Msa1200320 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
| Msa0693790 | Msa1200320 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0701100 | Msa1200320 | 0.812383 | 4.358554e-51 | -8.615850e-47 |
| Msa0705600 | Msa1200320 | 0.816656 | 4.942963e-52 | -8.615850e-47 |
| Msa0705990 | Msa1200320 | 0.808046 | 3.753118e-50 | -8.615850e-47 |
| Msa0709120 | Msa1200320 | 0.825603 | 4.284036e-54 | -8.615850e-47 |
| Msa0726080 | Msa1200320 | 0.817804 | 2.726309e-52 | -8.615850e-47 |
| Msa0743530 | Msa1200320 | 0.820078 | 8.295067e-53 | -8.615850e-47 |
| Msa0746170 | Msa1200320 | 0.829627 | 4.630914e-55 | -8.615850e-47 |
| Msa0746210 | Msa1200320 | 0.822875 | 1.874408e-53 | -8.615850e-47 |
| Msa0748920 | Msa1200320 | 0.809180 | 2.149320e-50 | -8.615850e-47 |
| Msa0751010 | Msa1200320 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa0764920 | Msa1200320 | 0.820054 | 8.400350e-53 | -8.615850e-47 |
| Msa0776750 | Msa1200320 | 0.834078 | 3.690040e-56 | -8.615850e-47 |
| Msa0794050 | Msa1200320 | 0.854952 | 8.734734e-62 | -8.615850e-47 |
| Msa0800370 | Msa1200320 | 0.815286 | 9.995236e-52 | -8.615850e-47 |
| Msa0818770 | Msa1200320 | 0.863224 | 2.899286e-64 | -8.615850e-47 |
| Msa0822170 | Msa1200320 | 0.846147 | 2.606600e-59 | -8.615850e-47 |
| Msa0838370 | Msa1200320 | 0.824419 | 8.154568e-54 | -8.615850e-47 |
| Msa0121820 | Msa1200320 | 0.809085 | 2.252142e-50 | -8.615850e-47 |
| Msa0126880 | Msa1200320 | 0.834258 | 3.325763e-56 | -8.615850e-47 |
| Msa0136120 | Msa1200320 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa0139670 | Msa1200320 | 0.829438 | 5.147451e-55 | -8.615850e-47 |
| Msa0140400 | Msa1200320 | 0.804449 | 2.148596e-49 | -8.615850e-47 |
| Msa0150260 | Msa1200320 | 0.830454 | 2.909682e-55 | -8.615850e-47 |
| Msa0154920 | Msa1200320 | 0.806581 | 7.672267e-50 | -8.615850e-47 |
| Msa0166750 | Msa1200320 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa0169300 | Msa1200320 | 0.815948 | 7.116120e-52 | -8.615850e-47 |
| Msa0171980 | Msa1200320 | 0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0175290 | Msa1200320 | -0.804551 | 2.045921e-49 | -8.615850e-47 |
| Msa0183460 | Msa1200320 | 0.816545 | 5.233222e-52 | -8.615850e-47 |
| Msa0183870 | Msa1200320 | 0.850560 | 1.568812e-60 | -8.615850e-47 |
| Msa0190120 | Msa1200320 | 0.846636 | 1.917904e-59 | -8.615850e-47 |
| Msa0191080 | Msa1200320 | 0.819749 | 9.865273e-53 | -8.615850e-47 |
| Msa0197530 | Msa1200320 | 0.855605 | 5.638833e-62 | -8.615850e-47 |
| Msa0197610 | Msa1200320 | 0.808623 | 2.827861e-50 | -8.615850e-47 |
| Msa0202930 | Msa1200320 | 0.827330 | 1.660814e-54 | -8.615850e-47 |
| Msa0206690 | Msa1200320 | 0.807646 | 4.566704e-50 | -8.615850e-47 |
| Msa0207670 | Msa1200320 | 0.823166 | 1.603346e-53 | -8.615850e-47 |
| Msa0209080 | Msa1200320 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0213430 | Msa1200320 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
| Msa0225340 | Msa1200320 | 0.806234 | 9.082663e-50 | -8.615850e-47 |
| Msa0229360 | Msa1200320 | 0.835550 | 1.571891e-56 | -8.615850e-47 |
| Msa0231790 | Msa1200320 | 0.820190 | 7.818422e-53 | -8.615850e-47 |
| Msa0236270 | Msa1200320 | 0.812215 | 4.742569e-51 | -8.615850e-47 |
| Msa0365860 | Msa1200320 | 0.815692 | 8.115212e-52 | -8.615850e-47 |
| Msa0370160 | Msa1200320 | -0.807074 | 6.037289e-50 | -8.615850e-47 |
| Msa0375980 | Msa1200320 | 0.811725 | 6.064005e-51 | -8.615850e-47 |
| Msa0376600 | Msa1200320 | 0.812890 | 3.376101e-51 | -8.615850e-47 |
| Msa0380100 | Msa1200320 | 0.842682 | 2.226956e-58 | -8.615850e-47 |
| Msa0384880 | Msa1200320 | 0.825895 | 3.652021e-54 | -8.615850e-47 |
| Msa0385500 | Msa1200320 | 0.821020 | 5.041169e-53 | -8.615850e-47 |
| Msa0403770 | Msa1200320 | 0.845786 | 3.268422e-59 | -8.615850e-47 |
| Msa0418400 | Msa1200320 | 0.814964 | 1.178219e-51 | -8.615850e-47 |
| Msa0419520 | Msa1200320 | 0.805396 | 1.362040e-49 | -8.615850e-47 |
| Msa0436190 | Msa1200320 | 0.815423 | 9.316782e-52 | -8.615850e-47 |
| Msa0437690 | Msa1200320 | -0.804846 | 1.775687e-49 | -8.615850e-47 |
| Msa0439890 | Msa1200320 | 0.849365 | 3.388279e-60 | -8.615850e-47 |
| Msa0443430 | Msa1200320 | 0.834706 | 2.566133e-56 | -8.615850e-47 |
| Msa0463340 | Msa1200320 | 0.833918 | 4.046372e-56 | -8.615850e-47 |
| Msa0469620 | Msa1200320 | -0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0472720 | Msa1200320 | 0.801197 | 1.008511e-48 | -8.615850e-47 |
| Msa0472770 | Msa1200320 | 0.807692 | 4.465302e-50 | -8.615850e-47 |
| Msa0479330 | Msa1200320 | 0.800052 | 1.726605e-48 | -8.615850e-47 |
| Msa0994370 | Msa1200320 | 0.825472 | 4.602222e-54 | -8.615850e-47 |
| Msa0999920 | Msa1200320 | 0.833458 | 5.271381e-56 | -8.615850e-47 |
| Msa1002600 | Msa1200320 | -0.810723 | 1.000507e-50 | -8.615850e-47 |
| Msa1010460 | Msa1200320 | 0.809382 | 1.944820e-50 | -8.615850e-47 |
| Msa1025940 | Msa1200320 | 0.800616 | 1.325853e-48 | -8.615850e-47 |
| Msa1036910 | Msa1200320 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa1045450 | Msa1200320 | 0.800535 | 1.377074e-48 | -8.615850e-47 |
| Msa1063420 | Msa1200320 | 0.801262 | 9.784902e-49 | -8.615850e-47 |
| Msa1070390 | Msa1200320 | 0.816600 | 5.085744e-52 | -8.615850e-47 |
| Msa1071660 | Msa1200320 | 0.819785 | 9.676069e-53 | -8.615850e-47 |
| Msa1073400 | Msa1200320 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa1081790 | Msa1200320 | -0.812987 | 3.214865e-51 | -8.615850e-47 |
| Msa1084500 | Msa1200320 | -0.829171 | 5.975910e-55 | -8.615850e-47 |
| Msa1096550 | Msa1200320 | 0.805785 | 1.128566e-49 | -8.615850e-47 |
| Msa1096620 | Msa1200320 | 0.806148 | 9.470094e-50 | -8.615850e-47 |
| Msa0239060 | Msa1200320 | 0.855155 | 7.628155e-62 | -8.615850e-47 |
| Msa0244980 | Msa1200320 | 0.837136 | 6.210971e-57 | -8.615850e-47 |
| Msa0245580 | Msa1200320 | 0.800059 | 1.721523e-48 | -8.615850e-47 |
| Msa0257490 | Msa1200320 | 0.819729 | 9.967707e-53 | -8.615850e-47 |
| Msa0265160 | Msa1200320 | 0.814452 | 1.529858e-51 | -8.615850e-47 |
| Msa0266360 | Msa1200320 | 0.811832 | 5.747266e-51 | -8.615850e-47 |
| Msa0269470 | Msa1200320 | 0.835970 | 1.230779e-56 | -8.615850e-47 |
| Msa0271890 | Msa1200320 | 0.865845 | 4.393338e-65 | -8.615850e-47 |
| Msa0283420 | Msa1200320 | 0.808269 | 3.364899e-50 | -8.615850e-47 |
| Msa0284450 | Msa1200320 | 0.827836 | 1.255409e-54 | -8.615850e-47 |
| Msa0284820 | Msa1200320 | 0.813535 | 2.437059e-51 | -8.615850e-47 |
| Msa0296790 | Msa1200320 | 0.835053 | 2.099221e-56 | -8.615850e-47 |
| Msa0296920 | Msa1200320 | 0.821862 | 3.221114e-53 | -8.615850e-47 |
| Msa0304660 | Msa1200320 | 0.804686 | 1.917652e-49 | -8.615850e-47 |
| Msa0310860 | Msa1200320 | 0.866535 | 2.655281e-65 | -8.615850e-47 |
| Msa0347750 | Msa1200320 | 0.813283 | 2.768370e-51 | -8.615850e-47 |
| Msa0358860 | Msa1200320 | 0.838558 | 2.678149e-57 | -8.615850e-47 |
| Msa1113880 | Msa1200320 | 0.821677 | 3.554980e-53 | -8.615850e-47 |
| Msa1125790 | Msa1200320 | -0.855042 | 8.227760e-62 | -8.615850e-47 |
| Msa1131560 | Msa1200320 | 0.820175 | 7.881582e-53 | -8.615850e-47 |
| Msa1133230 | Msa1200320 | 0.811653 | 6.286005e-51 | -8.615850e-47 |
| Msa1133250 | Msa1200320 | 0.814986 | 1.165092e-51 | -8.615850e-47 |
| Msa1135800 | Msa1200320 | -0.841200 | 5.488406e-58 | -8.615850e-47 |
| Msa1135810 | Msa1200320 | -0.839635 | 1.408652e-57 | -8.615850e-47 |
| Msa1158770 | Msa1200320 | 0.822948 | 1.802227e-53 | -8.615850e-47 |
| Msa1165780 | Msa1200320 | 0.823599 | 1.269917e-53 | -8.615850e-47 |
| Msa1166090 | Msa1200320 | -0.818122 | 2.311343e-52 | -8.615850e-47 |
| Msa1166870 | Msa1200320 | 0.806001 | 1.016967e-49 | -8.615850e-47 |
| Msa1173900 | Msa1200320 | 0.803333 | 3.664571e-49 | -8.615850e-47 |
| Msa1178370 | Msa1200320 | 0.862893 | 3.669854e-64 | -8.615850e-47 |
| Msa1188560 | Msa1200320 | 0.823078 | 1.681113e-53 | -8.615850e-47 |
| Msa1200310 | Msa1200320 | 0.829880 | 4.018259e-55 | -8.615850e-47 |
| Msa1200320 | Msa1205480 | 0.801692 | 7.985726e-49 | -8.615850e-47 |
| Msa1200320 | Msa1205590 | 0.803884 | 2.817393e-49 | -8.615850e-47 |
| Msa1200320 | Msa1206650 | 0.808081 | 3.689346e-50 | -8.615850e-47 |
| Msa1200320 | Msa1207730 | 0.814545 | 1.459205e-51 | -8.615850e-47 |
| Msa1200320 | Msa1211830 | 0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa1200320 | Msa1218580 | 0.809783 | 1.595507e-50 | -8.615850e-47 |
| Msa1200320 | Msa1226720 | 0.807422 | 5.094187e-50 | -8.615850e-47 |
| Msa1200320 | Msa1233850 | 0.830697 | 2.537178e-55 | -8.615850e-47 |
| Msa1200320 | Msa1242920 | -0.813512 | 2.465198e-51 | -8.615850e-47 |
| Msa1200320 | Msa1253230 | 0.813613 | 2.342545e-51 | -8.615850e-47 |
| Msa1200320 | Msa1253810 | 0.817487 | 3.215094e-52 | -8.615850e-47 |
| Msa1200320 | Msa1261680 | -0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa1200320 | Msa1262890 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
| Msa1200320 | Msa1296830 | 0.834721 | 2.543768e-56 | -8.615850e-47 |
| Msa1200320 | Msa1299700 | 0.817118 | 3.892125e-52 | -8.615850e-47 |
| Msa1200320 | Msa1303580 | 0.848031 | 7.938535e-60 | -8.615850e-47 |
| Msa1200320 | Msa1307180 | 0.805622 | 1.221535e-49 | -8.615850e-47 |
| Msa1200320 | Msa1316360 | 0.806254 | 8.994325e-50 | -8.615850e-47 |
| Msa1200320 | Msa1332220 | 0.807723 | 4.397842e-50 | -8.615850e-47 |
| Msa1200320 | Msa1336560 | 0.818435 | 1.962771e-52 | -8.615850e-47 |
| Msa1200320 | Msa1338610 | 0.807503 | 4.895812e-50 | -8.615850e-47 |
| Msa1200320 | Msa1343290 | 0.805954 | 1.040054e-49 | -8.615850e-47 |
| Msa1200320 | Msa1352890 | 0.834517 | 2.862656e-56 | -8.615850e-47 |
| Msa1200320 | Msa1359270 | 0.830114 | 3.524641e-55 | -8.615850e-47 |
| Msa1200320 | Msa1363700 | 0.807381 | 5.196831e-50 | -8.615850e-47 |
| Msa1200320 | Msa1370590 | 0.841148 | 5.662647e-58 | -8.615850e-47 |
| Msa1200320 | Msa1381650 | 0.817998 | 2.464725e-52 | -8.615850e-47 |
| Msa1200320 | Msa1382020 | 0.812446 | 4.222651e-51 | -8.615850e-47 |
| Msa1200320 | Msa1383350 | 0.806229 | 9.104881e-50 | -8.615850e-47 |
| Msa1200320 | Msa1384100 | 0.837091 | 6.378970e-57 | -8.615850e-47 |
| Msa1200320 | Msa1395730 | 0.805094 | 1.575760e-49 | -8.615850e-47 |
| Msa1200320 | Msa1396400 | -0.816517 | 5.308538e-52 | -8.615850e-47 |
| Msa1200320 | Msa1418960 | -0.849176 | 3.824464e-60 | -8.615850e-47 |
| Msa1200320 | Msa1421900 | 0.810988 | 8.765446e-51 | -8.615850e-47 |
| Msa1200320 | Msa1422810 | 0.828579 | 8.312071e-55 | -8.615850e-47 |
| Msa1200320 | Msa1426920 | 0.809166 | 2.164352e-50 | -8.615850e-47 |
| Msa1200320 | Msa1433600 | 0.826638 | 2.430306e-54 | -8.615850e-47 |
| Msa1200320 | Msa1436600 | 0.811476 | 6.869379e-51 | -8.615850e-47 |
| Msa1200320 | Msa1444120 | 0.832947 | 7.067462e-56 | -8.615850e-47 |
| Msa1200320 | Msa1447890 | 0.826520 | 2.593564e-54 | -8.615850e-47 |
| Msa1200320 | Msa1454450 | 0.825762 | 3.928337e-54 | -8.615850e-47 |
| Msa1200320 | Msa1454680 | 0.813754 | 2.180902e-51 | -8.615850e-47 |
| Msa1200320 | Msa1458030 | 0.811301 | 7.498661e-51 | -8.615850e-47 |
| Msa1200320 | Msa1458090 | 0.844743 | 6.257799e-59 | -8.615850e-47 |
| Msa1200320 | Msa1459960 | 0.837720 | 4.399589e-57 | -8.615850e-47 |
| Msa1200320 | Msa1460320 | -0.800811 | 1.209889e-48 | -8.615850e-47 |
| Msa1200320 | Msa1462470 | 0.808793 | 2.600921e-50 | -8.615850e-47 |
| Msa1200320 | Msa1465610 | -0.802618 | 5.150869e-49 | -8.615850e-47 |
| Msa0482940 | Msa1200320 | 0.832273 | 1.038497e-55 | -8.615850e-47 |
| Msa0485710 | Msa1200320 | 0.825351 | 4.914823e-54 | -8.615850e-47 |
| Msa0496450 | Msa1200320 | 0.804350 | 2.253339e-49 | -8.615850e-47 |
| Msa0509950 | Msa1200320 | -0.804659 | 1.942183e-49 | -8.615850e-47 |
| Msa0514610 | Msa1200320 | 0.802177 | 6.348765e-49 | -8.615850e-47 |
| Msa0517960 | Msa1200320 | 0.800637 | 1.312832e-48 | -8.615850e-47 |
| Msa0524600 | Msa1200320 | 0.831714 | 1.427427e-55 | -8.615850e-47 |
| Msa0527740 | Msa1200320 | 0.801216 | 9.996773e-49 | -8.615850e-47 |
| Msa0534410 | Msa1200320 | 0.804033 | 2.623270e-49 | -8.615850e-47 |
| Msa0534900 | Msa1200320 | 0.807773 | 4.291035e-50 | -8.615850e-47 |
| Msa0542560 | Msa1200320 | 0.814657 | 1.377912e-51 | -8.615850e-47 |
| Msa0544840 | Msa1200320 | 0.804231 | 2.385344e-49 | -8.615850e-47 |
| Msa0549780 | Msa1200320 | 0.802874 | 4.560046e-49 | -8.615850e-47 |
| Msa0572000 | Msa1200320 | 0.814501 | 1.492345e-51 | -8.615850e-47 |
| Msa0588260 | Msa1200320 | 0.807166 | 5.772668e-50 | -8.615850e-47 |
| Msa0590650 | Msa1200320 | 0.811360 | 7.277578e-51 | -8.615850e-47 |
| Msa0600080 | Msa1200320 | 0.825488 | 4.560928e-54 | -8.615850e-47 |
| Msa0600420 | Msa1200320 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0600450 | Msa1200320 | 0.803482 | 3.413713e-49 | -8.615850e-47 |
| Msa0602370 | Msa1200320 | 0.834142 | 3.555809e-56 | -8.615850e-47 |
| Msa0844610 | Msa1200320 | 0.815233 | 1.026814e-51 | -8.615850e-47 |
| Msa0846230 | Msa1200320 | 0.819478 | 1.137104e-52 | -8.615850e-47 |
| Msa0858440 | Msa1200320 | 0.843686 | 1.202652e-58 | -8.615850e-47 |
| Msa0877710 | Msa1200320 | 0.850693 | 1.440096e-60 | -8.615850e-47 |
| Msa0879860 | Msa1200320 | 0.827866 | 1.234573e-54 | -8.615850e-47 |
| Msa0880810 | Msa1200320 | 0.811511 | 6.750919e-51 | -8.615850e-47 |
| Msa0882730 | Msa1200320 | 0.814933 | 1.197002e-51 | -8.615850e-47 |
| Msa0905990 | Msa1200320 | 0.804715 | 1.891244e-49 | -8.615850e-47 |
| Msa0921870 | Msa1200320 | 0.816391 | 5.665625e-52 | -8.615850e-47 |
| Msa0924150 | Msa1200320 | -0.829793 | 4.218962e-55 | -8.615850e-47 |
| Msa0933380 | Msa1200320 | 0.818499 | 1.898436e-52 | -8.615850e-47 |
| Msa0934840 | Msa1200320 | 0.800007 | 1.763632e-48 | -8.615850e-47 |
| Msa0943270 | Msa1200320 | 0.834516 | 2.864387e-56 | -8.615850e-47 |
| Msa0944200 | Msa1200320 | 0.834249 | 3.342737e-56 | -8.615850e-47 |
| Msa0944610 | Msa1200320 | 0.836517 | 8.932186e-57 | -8.615850e-47 |
| Msa0947800 | Msa1200320 | 0.835556 | 1.566136e-56 | -8.615850e-47 |
| Msa0963090 | Msa1200320 | -0.824109 | 9.643014e-54 | -8.615850e-47 |
| Msa0971160 | Msa1200320 | 0.823209 | 1.566867e-53 | -8.615850e-47 |
| Msa0974950 | Msa1200320 | 0.843141 | 1.681673e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200320 | MtrunA17_Chr8g0369831 | 90.625 | 160 | 4 | 3 | 1 | 149 | 1 | 160 | 2.99e-49 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 103 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCTGCTGCCGCTGCTTA+TGG | 0.185365 | 8_1:+52903367 | Msa1200320:CDS |
| TATGAACTGAAGTTTGTTAA+TGG | 0.188949 | 8_1:+52903890 | Msa1200320:three_prime_UTR |
| TAAATAAACTATACTTCTTA+TGG | 0.234734 | 8_1:+52903658 | Msa1200320:three_prime_UTR |
| GGTATTGGAGGAATGCTTGC+TGG | 0.278390 | 8_1:+52903337 | Msa1200320:CDS |
| TGGTGTATGTTCATCATATT+AGG | 0.319959 | 8_1:+52903678 | Msa1200320:three_prime_UTR |
| TTGAGCAAGTCTTGAGGTAT+TGG | 0.326848 | 8_1:+52903757 | Msa1200320:three_prime_UTR |
| ATGAGGATCAAAACACATTA+AGG | 0.331729 | 8_1:-52903821 | None:intergenic |
| AAGTTCAAGCATGGAAAGTT+TGG | 0.362341 | 8_1:+52903541 | Msa1200320:CDS |
| TCTCATGGACATGGCGGTAT+TGG | 0.367332 | 8_1:+52903322 | Msa1200320:CDS |
| GAAATTGAGAAATTGAGAAT+TGG | 0.373071 | 8_1:-52901549 | None:intergenic |
| TACCCACCTGCTGGTTATCC+TGG | 0.395132 | 8_1:+52902181 | Msa1200320:CDS |
| TATTGTCTGGTTTAAAAGAT+GGG | 0.410785 | 8_1:+52901953 | Msa1200320:exon |
| GTATTGGAGGAATGCTTGCT+GGG | 0.419908 | 8_1:+52903338 | Msa1200320:CDS |
| ATGATGAATCTTCTGACAAA+GGG | 0.447450 | 8_1:+52901993 | Msa1200320:CDS |
| CACGGCGCTCACGGTTATCC+AGG | 0.457573 | 8_1:+52903415 | Msa1200320:CDS |
| CATGGAAAGTTTGGCAAACA+TGG | 0.462196 | 8_1:+52903550 | Msa1200320:CDS |
| TGAGAAATTGAGAATTGGAA+TGG | 0.469473 | 8_1:-52901544 | None:intergenic |
| CATCTTGCTCAAGGTATAGC+TGG | 0.471682 | 8_1:+52902025 | Msa1200320:CDS |
| GAATGGAAGAAGAGAGAAAG+AGG | 0.474270 | 8_1:-52901527 | None:intergenic |
| GGTTATCCTGGTGCACATGC+TGG | 0.475046 | 8_1:+52902193 | Msa1200320:CDS |
| TTATTGTCTGGTTTAAAAGA+TGG | 0.486028 | 8_1:+52901952 | Msa1200320:exon |
| GCTGCTGCACATGGTGGACA+TGG | 0.487101 | 8_1:+52902049 | Msa1200320:CDS |
| TGGCAGTCACATGGGTCACA+TGG | 0.491218 | 8_1:+52903468 | Msa1200320:CDS |
| CATGGTGCTCACGGCGCTCA+CGG | 0.491903 | 8_1:+52903406 | Msa1200320:CDS |
| CATGGACATGGCGGTATTGG+AGG | 0.493065 | 8_1:+52903325 | Msa1200320:CDS |
| CAACAAGGTTATCCACCTGC+TGG | 0.498616 | 8_1:+52902106 | Msa1200320:CDS |
| GTGAGCGCCGTGAGCACCAT+GGG | 0.499573 | 8_1:-52903404 | None:intergenic |
| TGTGATCATGTAAAACTTAG+CGG | 0.509561 | 8_1:+52903927 | Msa1200320:three_prime_UTR |
| CATGTCTCCCATGGTGCTCA+CGG | 0.510395 | 8_1:+52903397 | Msa1200320:CDS |
| AATTTCTTTCTCTTATTCGA+AGG | 0.513291 | 8_1:+52901566 | Msa1200320:five_prime_UTR |
| TTGTTATCACCAGGGTCTCA+TGG | 0.517186 | 8_1:+52903307 | Msa1200320:intron |
| TTATCCAGGTGGCTACCCAC+AGG | 0.520728 | 8_1:+52903429 | Msa1200320:CDS |
| AAACATGGTGGAGGCAAGCA+CGG | 0.522918 | 8_1:+52903565 | Msa1200320:CDS |
| AACATGGTGGAGGCAAGCAC+GGG | 0.529522 | 8_1:+52903566 | Msa1200320:CDS |
| TGCACATGGTGGCAGTCACA+TGG | 0.530628 | 8_1:+52903459 | Msa1200320:CDS |
| TGTTGACCAGCATGTGCACC+AGG | 0.531075 | 8_1:-52902199 | None:intergenic |
| CATGATGAATCTTCTGACAA+AGG | 0.545311 | 8_1:+52901992 | Msa1200320:CDS |
| GGCACTCACCATGTCTCCCA+TGG | 0.551274 | 8_1:+52903388 | Msa1200320:CDS |
| CAACAAGGGTACCCACCTGC+TGG | 0.551446 | 8_1:+52902172 | Msa1200320:CDS |
| GCAAGCACGGGTTCAAGAAG+TGG | 0.551612 | 8_1:+52903578 | Msa1200320:CDS |
| CGTGAGCACCATGGGAGACA+TGG | 0.552868 | 8_1:-52903396 | None:intergenic |
| ATAGCTGGTGCTGCTGCACA+TGG | 0.559628 | 8_1:+52902040 | Msa1200320:CDS |
| ATAGTATAGCGTAAATTGAG+TGG | 0.560161 | 8_1:-52901483 | None:intergenic |
| GTGGGTACCCTTGTTGAGGA+GGG | 0.564480 | 8_1:-52902165 | None:intergenic |
| CACATGGGTCACATGGGCCA+CGG | 0.567570 | 8_1:+52903475 | Msa1200320:CDS |
| GTTCAATGAAACATGTAATG+AGG | 0.569550 | 8_1:-52903838 | None:intergenic |
| ACATCAATTTGTCAGTACTT+CGG | 0.569792 | 8_1:-52903791 | None:intergenic |
| AAGCAGCATGGCAAGTTCAA+AGG | 0.570799 | 8_1:+52903505 | Msa1200320:CDS |
| GGTGGGTACCCTTGTTGAGG+AGG | 0.571515 | 8_1:-52902166 | None:intergenic |
| GGAGGACATGGTTACCCACC+TGG | 0.572769 | 8_1:+52902070 | Msa1200320:CDS |
| AATGGAAGAAGAGAGAAAGA+GGG | 0.579029 | 8_1:-52901526 | None:intergenic |
| GGCAGTCACATGGGTCACAT+GGG | 0.584120 | 8_1:+52903469 | Msa1200320:CDS |
| CACGGAAAATTCAAGCAGCA+TGG | 0.585267 | 8_1:+52903493 | Msa1200320:CDS |
| GCAGGTGGATAACCTTGTTG+TGG | 0.585819 | 8_1:-52902103 | None:intergenic |
| CTGGTTTAAAAGATGGGTGG+TGG | 0.586270 | 8_1:+52901959 | Msa1200320:exon |
| TATTGGAGGAATGCTTGCTG+GGG | 0.586380 | 8_1:+52903339 | Msa1200320:CDS |
| AAGCATGGCAAGTTCAAGCA+TGG | 0.588988 | 8_1:+52903532 | Msa1200320:CDS |
| CCATGTGCATATCCGCCCTG+TGG | 0.589050 | 8_1:-52903445 | None:intergenic |
| AACAAGGTTATCCACCTGCT+GGG | 0.589294 | 8_1:+52902107 | Msa1200320:CDS |
| TGTGGAGGGTATGCACCAGG+TGG | 0.591090 | 8_1:-52902085 | None:intergenic |
| AAGTTCAAAGGAGGAAAGCA+TGG | 0.591120 | 8_1:+52903517 | Msa1200320:CDS |
| CGTGAGCGCCGTGAGCACCA+TGG | 0.592595 | 8_1:-52903405 | None:intergenic |
| CATGTGCATATCCGCCCTGT+GGG | 0.593675 | 8_1:-52903444 | None:intergenic |
| TATCCAGGTGGCTACCCACA+GGG | 0.596964 | 8_1:+52903430 | Msa1200320:CDS |
| GGTGGATAACCTTGTTGTGG+AGG | 0.597323 | 8_1:-52902100 | None:intergenic |
| TGTTGTGGTGGATACCCAGC+AGG | 0.597568 | 8_1:-52902121 | None:intergenic |
| GCACATGCTGGTCAACATGC+TGG | 0.600903 | 8_1:+52902205 | Msa1200320:CDS |
| GGAGGATAACCTTGTTGTGG+TGG | 0.601274 | 8_1:-52902133 | None:intergenic |
| TCACCAGGGTCTCATGGACA+TGG | 0.607441 | 8_1:+52903313 | Msa1200320:intron |
| GTGGATAACCTTGTTGTGGA+GGG | 0.609108 | 8_1:-52902099 | None:intergenic |
| ATACCTCAAGACTTGCTCAA+AGG | 0.609822 | 8_1:-52903754 | None:intergenic |
| TGTGCACCAGGATAACCAGC+AGG | 0.610864 | 8_1:-52902187 | None:intergenic |
| AGTGGATACCCTCCTCAACA+AGG | 0.611530 | 8_1:+52902157 | Msa1200320:CDS |
| AAGTTTGGCAAACATGGTGG+AGG | 0.614031 | 8_1:+52903556 | Msa1200320:CDS |
| GCAGGTGGGTACCCTTGTTG+AGG | 0.616351 | 8_1:-52902169 | None:intergenic |
| CATGGTGGACATGGAGGACA+TGG | 0.622620 | 8_1:+52902058 | Msa1200320:CDS |
| CTAGGAGGATAACCTTGTTG+TGG | 0.624899 | 8_1:-52902136 | None:intergenic |
| TGTTGTGGAGGGTATGCACC+AGG | 0.628769 | 8_1:-52902088 | None:intergenic |
| TGTTGAGGAGGGTATCCACT+AGG | 0.633295 | 8_1:-52902154 | None:intergenic |
| GCACATGGTGGCAGTCACAT+GGG | 0.634666 | 8_1:+52903460 | Msa1200320:CDS |
| GATCCTTTGAGCAAGTCTTG+AGG | 0.639257 | 8_1:+52903751 | Msa1200320:three_prime_UTR |
| GGAAAGTTTGGCAAACATGG+TGG | 0.640897 | 8_1:+52903553 | Msa1200320:CDS |
| CAGCATGGCAAGTTCAAAGG+AGG | 0.642465 | 8_1:+52903508 | Msa1200320:CDS |
| TGTCTGGTTTAAAAGATGGG+TGG | 0.642861 | 8_1:+52901956 | Msa1200320:exon |
| GCACCAGGATAACCAGCAGG+TGG | 0.647935 | 8_1:-52902184 | None:intergenic |
| CCACAGGGCGGATATGCACA+TGG | 0.652112 | 8_1:+52903445 | Msa1200320:CDS |
| ATTGGAGGAATGCTTGCTGG+GGG | 0.658337 | 8_1:+52903340 | Msa1200320:CDS |
| GGTGCATACCCTCCACAACA+AGG | 0.662307 | 8_1:+52902091 | Msa1200320:CDS |
| GTGGAGGGTATGCACCAGGT+GGG | 0.665437 | 8_1:-52902084 | None:intergenic |
| GCTGGTGCTGCTGCACATGG+TGG | 0.665716 | 8_1:+52902043 | Msa1200320:CDS |
| CACCAGGATAACCAGCAGGT+GGG | 0.668962 | 8_1:-52902183 | None:intergenic |
| CAACAAGGTTATCCTCCTAG+TGG | 0.669414 | 8_1:+52902139 | Msa1200320:CDS |
| GGCGCTCACGGTTATCCAGG+TGG | 0.672720 | 8_1:+52903418 | Msa1200320:CDS |
| GCTGGGTATCCACCACAACA+AGG | 0.676592 | 8_1:+52902124 | Msa1200320:CDS |
| GTGGATACCCTCCTCAACAA+GGG | 0.684013 | 8_1:+52902158 | Msa1200320:CDS |
| ATGGTGAGTGCCATAAGCAG+CGG | 0.686078 | 8_1:-52903377 | None:intergenic |
| TGAGGAGGGTATCCACTAGG+AGG | 0.690182 | 8_1:-52902151 | None:intergenic |
| TGTGGTGGATACCCAGCAGG+TGG | 0.696982 | 8_1:-52902118 | None:intergenic |
| TGATGAATCTTCTGACAAAG+GGG | 0.700396 | 8_1:+52901994 | Msa1200320:CDS |
| GCTGCACATGGTGGACATGG+AGG | 0.714704 | 8_1:+52902052 | Msa1200320:CDS |
| CAGGGCGGATATGCACATGG+TGG | 0.738005 | 8_1:+52903448 | Msa1200320:CDS |
| CCAGGGTCTCATGGACATGG+CGG | 0.758862 | 8_1:+52903316 | Msa1200320:intron |
| CCAGGTGGCTACCCACAGGG+CGG | 0.762549 | 8_1:+52903433 | Msa1200320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGAGTAAAAAAACAATA+GGG | - | chr8_1:52901598-52901617 | None:intergenic | 15.0% |
| !! | ATAATGAGTAAAAAAACAAT+AGG | - | chr8_1:52901599-52901618 | None:intergenic | 15.0% |
| !! | TTGTAACAATTTGTAATTAT+TGG | + | chr8_1:52901916-52901935 | Msa1200320:intron | 15.0% |
| !!! | AATAAATTATCGAATTTGTT+AGG | + | chr8_1:52902605-52902624 | Msa1200320:intron | 15.0% |
| !! | TAAATAAACTATACTTCTTA+TGG | + | chr8_1:52903658-52903677 | Msa1200320:three_prime_UTR | 15.0% |
| !! | AAGAAAAAAAACAAAAACAA+GGG | - | chr8_1:52903705-52903724 | None:intergenic | 15.0% |
| !! | AAAGAAAAAAAACAAAAACA+AGG | - | chr8_1:52903706-52903725 | None:intergenic | 15.0% |
| !!! | CCATTTTTTCAAATTATCAT+CGG | - | chr8_1:52902331-52902350 | None:intergenic | 20.0% |
| !! | CTAAAAACCTTAACAAAATA+AGG | - | chr8_1:52902666-52902685 | None:intergenic | 20.0% |
| !!! | TAAGGTTTTTAGTGAAATTA+TGG | + | chr8_1:52902674-52902693 | Msa1200320:intron | 20.0% |
| !!! | TCAGTTTATGAAATCTTTTT+AGG | - | chr8_1:52903096-52903115 | None:intergenic | 20.0% |
| ! | GAAATTGAGAAATTGAGAAT+TGG | - | chr8_1:52901552-52901571 | None:intergenic | 25.0% |
| ! | AATTTCTTTCTCTTATTCGA+AGG | + | chr8_1:52901566-52901585 | Msa1200320:five_prime_UTR | 25.0% |
| ! | TCAGATCATAAAAACAAACA+TGG | - | chr8_1:52901891-52901910 | None:intergenic | 25.0% |
| ! | TTTGTAATTATTGGATCATC+AGG | + | chr8_1:52901925-52901944 | Msa1200320:intron | 25.0% |
| !! | TTATTGTCTGGTTTAAAAGA+TGG | + | chr8_1:52901952-52901971 | Msa1200320:exon | 25.0% |
| !! | TATTGTCTGGTTTAAAAGAT+GGG | + | chr8_1:52901953-52901972 | Msa1200320:exon | 25.0% |
| ! | CAAAGGAAAATCAATTTGAA+AGG | - | chr8_1:52902238-52902257 | None:intergenic | 25.0% |
| ! | TGTAATAATCAGTAACTACA+AGG | - | chr8_1:52902271-52902290 | None:intergenic | 25.0% |
| ! | CCGATGATAATTTGAAAAAA+TGG | + | chr8_1:52902328-52902347 | Msa1200320:intron | 25.0% |
| ! | ATTCAAATATACAAGTTGTC+AGG | - | chr8_1:52902400-52902419 | None:intergenic | 25.0% |
| ! | TAATTCATATGCTTCTAAGT+AGG | - | chr8_1:52902460-52902479 | None:intergenic | 25.0% |
| !!! | TTATCGAATTTGTTAGGAAT+AGG | + | chr8_1:52902611-52902630 | Msa1200320:intron | 25.0% |
| !!! | TATGAACTGAAGTTTGTTAA+TGG | + | chr8_1:52903890-52903909 | Msa1200320:three_prime_UTR | 25.0% |
| !! | TAAGTTTTACATGATCACAT+AGG | - | chr8_1:52903926-52903945 | None:intergenic | 25.0% |
| ATAGTATAGCGTAAATTGAG+TGG | - | chr8_1:52901486-52901505 | None:intergenic | 30.0% | |
| TGAGAAATTGAGAATTGGAA+TGG | - | chr8_1:52901547-52901566 | None:intergenic | 30.0% | |
| AAGCTAACAATGATGATCTA+TGG | - | chr8_1:52901647-52901666 | None:intergenic | 30.0% | |
| GCATTTGAACAAATTTGTCT+TGG | + | chr8_1:52901842-52901861 | Msa1200320:intron | 30.0% | |
| TGAACAAATTTGTCTTGGAT+TGG | + | chr8_1:52901847-52901866 | Msa1200320:intron | 30.0% | |
| ! | AATTTGTCTTGGATTGGATT+AGG | + | chr8_1:52901853-52901872 | Msa1200320:intron | 30.0% |
| ! | ATTTGTCTTGGATTGGATTA+GGG | + | chr8_1:52901854-52901873 | Msa1200320:intron | 30.0% |
| ATGATGAATCTTCTGACAAA+GGG | + | chr8_1:52901993-52902012 | Msa1200320:CDS | 30.0% | |
| TACAAGGCATAACATAACAA+AGG | - | chr8_1:52902255-52902274 | None:intergenic | 30.0% | |
| GTATCATTGTATGTGAATTG+TGG | - | chr8_1:52902547-52902566 | None:intergenic | 30.0% | |
| TGATACTCACAAACTAATTG+TGG | + | chr8_1:52902561-52902580 | Msa1200320:intron | 30.0% | |
| GATACTCACAAACTAATTGT+GGG | + | chr8_1:52902562-52902581 | Msa1200320:intron | 30.0% | |
| TGAAGATTATACAACAGAAC+AGG | + | chr8_1:52902639-52902658 | Msa1200320:intron | 30.0% | |
| !!! | AACAGGTCCTTATTTTGTTA+AGG | + | chr8_1:52902656-52902675 | Msa1200320:intron | 30.0% |
| TCTCTATAAACTACATCAAG+TGG | + | chr8_1:52902760-52902779 | Msa1200320:intron | 30.0% | |
| CTTAAAATGAGTATGCAATG+TGG | + | chr8_1:52902859-52902878 | Msa1200320:intron | 30.0% | |
| CTTAAAAGAAACACTCAATG+CGG | + | chr8_1:52902897-52902916 | Msa1200320:intron | 30.0% | |
| ACGACAAAAAATCAACACAT+TGG | - | chr8_1:52903000-52903019 | None:intergenic | 30.0% | |
| !!! | TGATTTTTTGTCGTGATTTG+TGG | + | chr8_1:52903006-52903025 | Msa1200320:intron | 30.0% |
| CTGAGACTTATTGAATTTGA+TGG | + | chr8_1:52903112-52903131 | Msa1200320:intron | 30.0% | |
| AGACTTATTGAATTTGATGG+TGG | + | chr8_1:52903115-52903134 | Msa1200320:intron | 30.0% | |
| ! | TTAGCAGGTTCAAATGATTT+TGG | - | chr8_1:52903276-52903295 | None:intergenic | 30.0% |
| TGGTGTATGTTCATCATATT+AGG | + | chr8_1:52903678-52903697 | Msa1200320:three_prime_UTR | 30.0% | |
| ACATCAATTTGTCAGTACTT+CGG | - | chr8_1:52903794-52903813 | None:intergenic | 30.0% | |
| ATGAGGATCAAAACACATTA+AGG | - | chr8_1:52903824-52903843 | None:intergenic | 30.0% | |
| GTTCAATGAAACATGTAATG+AGG | - | chr8_1:52903841-52903860 | None:intergenic | 30.0% | |
| TGTGATCATGTAAAACTTAG+CGG | + | chr8_1:52903927-52903946 | Msa1200320:three_prime_UTR | 30.0% | |
| AATGGAAGAAGAGAGAAAGA+GGG | - | chr8_1:52901529-52901548 | None:intergenic | 35.0% | |
| ATGATTTAAGTGTGTCGTGT+CGG | - | chr8_1:52901722-52901741 | None:intergenic | 35.0% | |
| !! | TCATCAGGTGTTTTATTGTC+TGG | + | chr8_1:52901940-52901959 | Msa1200320:intron | 35.0% |
| CATGATGAATCTTCTGACAA+AGG | + | chr8_1:52901992-52902011 | Msa1200320:CDS | 35.0% | |
| TGATGAATCTTCTGACAAAG+GGG | + | chr8_1:52901994-52902013 | Msa1200320:CDS | 35.0% | |
| TCTATGAAACATTCACATCC+TGG | + | chr8_1:52902292-52902311 | Msa1200320:intron | 35.0% | |
| TTACAGCTGCAACAAAAATC+AGG | - | chr8_1:52902423-52902442 | None:intergenic | 35.0% | |
| GTATGTGAATTGTGGTTTCA+CGG | - | chr8_1:52902539-52902558 | None:intergenic | 35.0% | |
| !! | GAGTTGATGGCTTGAATATT+TGG | + | chr8_1:52902788-52902807 | Msa1200320:intron | 35.0% |
| ACATAGCCCATTATTCTGAT+AGG | + | chr8_1:52902813-52902832 | Msa1200320:intron | 35.0% | |
| CAGCTACCTATCAGAATAAT+GGG | - | chr8_1:52902822-52902841 | None:intergenic | 35.0% | |
| TGGTTTACTGTTTGTCTCAT+TGG | + | chr8_1:52903026-52903045 | Msa1200320:intron | 35.0% | |
| TTTACTGTTTGTCTCATTGG+TGG | + | chr8_1:52903029-52903048 | Msa1200320:intron | 35.0% | |
| !!! | TTGTCTCATTGGTGGATTTT+AGG | + | chr8_1:52903037-52903056 | Msa1200320:intron | 35.0% |
| TTAGATTTGTCGATGTCTTC+TGG | + | chr8_1:52903141-52903160 | Msa1200320:intron | 35.0% | |
| ACAACAGTAGAAAACTTAGC+AGG | - | chr8_1:52903291-52903310 | None:intergenic | 35.0% | |
| TTTCTACTGTTGTTATCACC+AGG | + | chr8_1:52903298-52903317 | Msa1200320:intron | 35.0% | |
| TTCTACTGTTGTTATCACCA+GGG | + | chr8_1:52903299-52903318 | Msa1200320:intron | 35.0% | |
| AAGTTCAAGCATGGAAAGTT+TGG | + | chr8_1:52903541-52903560 | Msa1200320:CDS | 35.0% | |
| !!! | GTTTTGCTATTTCAATGCAC+TGG | + | chr8_1:52903729-52903748 | Msa1200320:three_prime_UTR | 35.0% |
| GAATGGAAGAAGAGAGAAAG+AGG | - | chr8_1:52901530-52901549 | None:intergenic | 40.0% | |
| ! | TGTCTGGTTTAAAAGATGGG+TGG | + | chr8_1:52901956-52901975 | Msa1200320:exon | 40.0% |
| ! | GTGTTTTCACATCTTGCTCA+AGG | + | chr8_1:52902016-52902035 | Msa1200320:CDS | 40.0% |
| AAACATTCACATCCTGGCAT+TGG | + | chr8_1:52902298-52902317 | Msa1200320:intron | 40.0% | |
| ATAAACGTAAGCACGTGTGT+CGG | + | chr8_1:52902356-52902375 | Msa1200320:intron | 40.0% | |
| ! | TGGTGTCAAGTCCTCAATAT+TGG | + | chr8_1:52902694-52902713 | Msa1200320:intron | 40.0% |
| CGAGCAACAAACCAATATTG+AGG | - | chr8_1:52902708-52902727 | None:intergenic | 40.0% | |
| AGCGAGTGACCTAAACTAAT+GGG | - | chr8_1:52902732-52902751 | None:intergenic | 40.0% | |
| AAGCGAGTGACCTAAACTAA+TGG | - | chr8_1:52902733-52902752 | None:intergenic | 40.0% | |
| TCAAGTGGTATCAGAGTTGA+TGG | + | chr8_1:52902775-52902794 | Msa1200320:intron | 40.0% | |
| CCAGCTACCTATCAGAATAA+TGG | - | chr8_1:52902823-52902842 | None:intergenic | 40.0% | |
| CCATTATTCTGATAGGTAGC+TGG | + | chr8_1:52902820-52902839 | Msa1200320:intron | 40.0% | |
| CAATGTGGAGACTCAAACTT+TGG | + | chr8_1:52902874-52902893 | Msa1200320:intron | 40.0% | |
| TCAGTTGTTGAGAGTTCCAA+GGG | - | chr8_1:52903065-52903084 | None:intergenic | 40.0% | |
| ATCAGTTGTTGAGAGTTCCA+AGG | - | chr8_1:52903066-52903085 | None:intergenic | 40.0% | |
| AAGTTCAAAGGAGGAAAGCA+TGG | + | chr8_1:52903517-52903536 | Msa1200320:CDS | 40.0% | |
| CATGGAAAGTTTGGCAAACA+TGG | + | chr8_1:52903550-52903569 | Msa1200320:CDS | 40.0% | |
| ! | ATACCTCAAGACTTGCTCAA+AGG | - | chr8_1:52903757-52903776 | None:intergenic | 40.0% |
| TTGAGCAAGTCTTGAGGTAT+TGG | + | chr8_1:52903757-52903776 | Msa1200320:three_prime_UTR | 40.0% | |
| GAGTGGAGACAAAAAGAGAG+AGG | - | chr8_1:52901469-52901488 | None:intergenic | 45.0% | |
| TCTGACACACATCTGATCGA+AGG | + | chr8_1:52901678-52901697 | Msa1200320:intron | 45.0% | |
| CTGGTTTAAAAGATGGGTGG+TGG | + | chr8_1:52901959-52901978 | Msa1200320:exon | 45.0% | |
| CATCTTGCTCAAGGTATAGC+TGG | + | chr8_1:52902025-52902044 | Msa1200320:CDS | 45.0% | |
| ! | GTGGATAACCTTGTTGTGGA+GGG | - | chr8_1:52902102-52902121 | None:intergenic | 45.0% |
| AACAAGGTTATCCACCTGCT+GGG | + | chr8_1:52902107-52902126 | Msa1200320:CDS | 45.0% | |
| CTAGGAGGATAACCTTGTTG+TGG | - | chr8_1:52902139-52902158 | None:intergenic | 45.0% | |
| CAACAAGGTTATCCTCCTAG+TGG | + | chr8_1:52902139-52902158 | Msa1200320:CDS | 45.0% | |
| ! | TTGTGGTTTCACGGCTAGTT+CGG | - | chr8_1:52902530-52902549 | None:intergenic | 45.0% |
| TGTGGGAGTTAAAGTGCAAG+TGG | + | chr8_1:52902579-52902598 | Msa1200320:intron | 45.0% | |
| ! | GTTGCTCGTCCCATTAGTTT+AGG | + | chr8_1:52902720-52902739 | Msa1200320:intron | 45.0% |
| TAGCTGGTGACTCGAGTATT+TGG | + | chr8_1:52902836-52902855 | Msa1200320:intron | 45.0% | |
| !! | TCCTGCACATTGGCTTGAAA+TGG | + | chr8_1:52902939-52902958 | Msa1200320:intron | 45.0% |
| TCCATTTCAAGCCAATGTGC+AGG | - | chr8_1:52902943-52902962 | None:intergenic | 45.0% | |
| TTGTCGATGTCTTCTGGTGA+CGG | + | chr8_1:52903147-52903166 | Msa1200320:intron | 45.0% | |
| TTGTTATCACCAGGGTCTCA+TGG | + | chr8_1:52903307-52903326 | Msa1200320:intron | 45.0% | |
| GTATTGGAGGAATGCTTGCT+GGG | + | chr8_1:52903338-52903357 | Msa1200320:CDS | 45.0% | |
| ! | TATTGGAGGAATGCTTGCTG+GGG | + | chr8_1:52903339-52903358 | Msa1200320:CDS | 45.0% |
| !! | CATGCTGCTTGAATTTTCCG+TGG | - | chr8_1:52903495-52903514 | None:intergenic | 45.0% |
| CACGGAAAATTCAAGCAGCA+TGG | + | chr8_1:52903493-52903512 | Msa1200320:CDS | 45.0% | |
| AAGCAGCATGGCAAGTTCAA+AGG | + | chr8_1:52903505-52903524 | Msa1200320:CDS | 45.0% | |
| AAGCATGGCAAGTTCAAGCA+TGG | + | chr8_1:52903532-52903551 | Msa1200320:CDS | 45.0% | |
| GGAAAGTTTGGCAAACATGG+TGG | + | chr8_1:52903553-52903572 | Msa1200320:CDS | 45.0% | |
| AAGTTTGGCAAACATGGTGG+AGG | + | chr8_1:52903556-52903575 | Msa1200320:CDS | 45.0% | |
| GATCCTTTGAGCAAGTCTTG+AGG | + | chr8_1:52903751-52903770 | Msa1200320:three_prime_UTR | 45.0% | |
| ! | TAAGTGTGTCGTGTCGGTGT+TGG | - | chr8_1:52901716-52901735 | None:intergenic | 50.0% |
| ! | GGTGGATAACCTTGTTGTGG+AGG | - | chr8_1:52902103-52902122 | None:intergenic | 50.0% |
| GCAGGTGGATAACCTTGTTG+TGG | - | chr8_1:52902106-52902125 | None:intergenic | 50.0% | |
| CAACAAGGTTATCCACCTGC+TGG | + | chr8_1:52902106-52902125 | Msa1200320:CDS | 50.0% | |
| ! | GGAGGATAACCTTGTTGTGG+TGG | - | chr8_1:52902136-52902155 | None:intergenic | 50.0% |
| !! | TGTTGAGGAGGGTATCCACT+AGG | - | chr8_1:52902157-52902176 | None:intergenic | 50.0% |
| AGTGGATACCCTCCTCAACA+AGG | + | chr8_1:52902157-52902176 | Msa1200320:CDS | 50.0% | |
| GTGGATACCCTCCTCAACAA+GGG | + | chr8_1:52902158-52902177 | Msa1200320:CDS | 50.0% | |
| ! | GTTTCACGGCTAGTTCGGTA+TGG | - | chr8_1:52902525-52902544 | None:intergenic | 50.0% |
| TCAATGCGGAGACTCCAACT+TGG | + | chr8_1:52902911-52902930 | Msa1200320:intron | 50.0% | |
| !!! | TGGTGGATTTTAGGCTCCCT+TGG | + | chr8_1:52903046-52903065 | Msa1200320:intron | 50.0% |
| TCTCATGGACATGGCGGTAT+TGG | + | chr8_1:52903322-52903341 | Msa1200320:CDS | 50.0% | |
| ! | GGTATTGGAGGAATGCTTGC+TGG | + | chr8_1:52903337-52903356 | Msa1200320:CDS | 50.0% |
| ! | ATTGGAGGAATGCTTGCTGG+GGG | + | chr8_1:52903340-52903359 | Msa1200320:CDS | 50.0% |
| ATGGTGAGTGCCATAAGCAG+CGG | - | chr8_1:52903380-52903399 | None:intergenic | 50.0% | |
| CAGCATGGCAAGTTCAAAGG+AGG | + | chr8_1:52903508-52903527 | Msa1200320:CDS | 50.0% | |
| ! | AAACATGGTGGAGGCAAGCA+CGG | + | chr8_1:52903565-52903584 | Msa1200320:CDS | 50.0% |
| !! | ATAGCTGGTGCTGCTGCACA+TGG | + | chr8_1:52902040-52902059 | Msa1200320:CDS | 55.0% |
| !! | CATGGTGGACATGGAGGACA+TGG | + | chr8_1:52902058-52902077 | Msa1200320:CDS | 55.0% |
| ! | TGTTGTGGAGGGTATGCACC+AGG | - | chr8_1:52902091-52902110 | None:intergenic | 55.0% |
| GGTGCATACCCTCCACAACA+AGG | + | chr8_1:52902091-52902110 | Msa1200320:CDS | 55.0% | |
| !! | TGTTGTGGTGGATACCCAGC+AGG | - | chr8_1:52902124-52902143 | None:intergenic | 55.0% |
| GCTGGGTATCCACCACAACA+AGG | + | chr8_1:52902124-52902143 | Msa1200320:CDS | 55.0% | |
| !! | TGAGGAGGGTATCCACTAGG+AGG | - | chr8_1:52902154-52902173 | None:intergenic | 55.0% |
| GTGGGTACCCTTGTTGAGGA+GGG | - | chr8_1:52902168-52902187 | None:intergenic | 55.0% | |
| ! | TACCCACCTGCTGGTTATCC+TGG | + | chr8_1:52902181-52902200 | Msa1200320:CDS | 55.0% |
| CACCAGGATAACCAGCAGGT+GGG | - | chr8_1:52902186-52902205 | None:intergenic | 55.0% | |
| TGTGCACCAGGATAACCAGC+AGG | - | chr8_1:52902190-52902209 | None:intergenic | 55.0% | |
| GGTTATCCTGGTGCACATGC+TGG | + | chr8_1:52902193-52902212 | Msa1200320:CDS | 55.0% | |
| TGTTGACCAGCATGTGCACC+AGG | - | chr8_1:52902202-52902221 | None:intergenic | 55.0% | |
| GCACATGCTGGTCAACATGC+TGG | + | chr8_1:52902205-52902224 | Msa1200320:CDS | 55.0% | |
| !! | ATCGGTGTCAGTCCAATGCC+AGG | - | chr8_1:52902313-52902332 | None:intergenic | 55.0% |
| ! | TCACGGCTAGTTCGGTATGG+TGG | - | chr8_1:52902522-52902541 | None:intergenic | 55.0% |
| ATGCGGAGACTCCAACTTGG+AGG | + | chr8_1:52902914-52902933 | Msa1200320:intron | 55.0% | |
| TGCGGAGACTCCAACTTGGA+GGG | + | chr8_1:52902915-52902934 | Msa1200320:intron | 55.0% | |
| TCACCAGGGTCTCATGGACA+TGG | + | chr8_1:52903313-52903332 | Msa1200320:intron | 55.0% | |
| ! | CATGGACATGGCGGTATTGG+AGG | + | chr8_1:52903325-52903344 | Msa1200320:CDS | 55.0% |
| CATGTCTCCCATGGTGCTCA+CGG | + | chr8_1:52903397-52903416 | Msa1200320:CDS | 55.0% | |
| TTATCCAGGTGGCTACCCAC+AGG | + | chr8_1:52903429-52903448 | Msa1200320:CDS | 55.0% | |
| TATCCAGGTGGCTACCCACA+GGG | + | chr8_1:52903430-52903449 | Msa1200320:CDS | 55.0% | |
| CATGTGCATATCCGCCCTGT+GGG | - | chr8_1:52903447-52903466 | None:intergenic | 55.0% | |
| TGCACATGGTGGCAGTCACA+TGG | + | chr8_1:52903459-52903478 | Msa1200320:CDS | 55.0% | |
| GCACATGGTGGCAGTCACAT+GGG | + | chr8_1:52903460-52903479 | Msa1200320:CDS | 55.0% | |
| TGGCAGTCACATGGGTCACA+TGG | + | chr8_1:52903468-52903487 | Msa1200320:CDS | 55.0% | |
| GGCAGTCACATGGGTCACAT+GGG | + | chr8_1:52903469-52903488 | Msa1200320:CDS | 55.0% | |
| ! | AACATGGTGGAGGCAAGCAC+GGG | + | chr8_1:52903566-52903585 | Msa1200320:CDS | 55.0% |
| GCAAGCACGGGTTCAAGAAG+TGG | + | chr8_1:52903578-52903597 | Msa1200320:CDS | 55.0% | |
| !! | GCTGCTGCACATGGTGGACA+TGG | + | chr8_1:52902049-52902068 | Msa1200320:CDS | 60.0% |
| !! | GCTGCACATGGTGGACATGG+AGG | + | chr8_1:52902052-52902071 | Msa1200320:CDS | 60.0% |
| GGAGGACATGGTTACCCACC+TGG | + | chr8_1:52902070-52902089 | Msa1200320:CDS | 60.0% | |
| ! | GTGGAGGGTATGCACCAGGT+GGG | - | chr8_1:52902087-52902106 | None:intergenic | 60.0% |
| ! | TGTGGAGGGTATGCACCAGG+TGG | - | chr8_1:52902088-52902107 | None:intergenic | 60.0% |
| !! | TGTGGTGGATACCCAGCAGG+TGG | - | chr8_1:52902121-52902140 | None:intergenic | 60.0% |
| GGTGGGTACCCTTGTTGAGG+AGG | - | chr8_1:52902169-52902188 | None:intergenic | 60.0% | |
| GCAGGTGGGTACCCTTGTTG+AGG | - | chr8_1:52902172-52902191 | None:intergenic | 60.0% | |
| !! | CAACAAGGGTACCCACCTGC+TGG | + | chr8_1:52902172-52902191 | Msa1200320:CDS | 60.0% |
| GCACCAGGATAACCAGCAGG+TGG | - | chr8_1:52902187-52902206 | None:intergenic | 60.0% | |
| TGTGCAGGAGCCCTCCAAGT+TGG | - | chr8_1:52902928-52902947 | None:intergenic | 60.0% | |
| CTTGGAGGGCTCCTGCACAT+TGG | + | chr8_1:52902929-52902948 | Msa1200320:intron | 60.0% | |
| CCAGGGTCTCATGGACATGG+CGG | + | chr8_1:52903316-52903335 | Msa1200320:intron | 60.0% | |
| GGCACTCACCATGTCTCCCA+TGG | + | chr8_1:52903388-52903407 | Msa1200320:CDS | 60.0% | |
| CGTGAGCACCATGGGAGACA+TGG | - | chr8_1:52903399-52903418 | None:intergenic | 60.0% | |
| CCATGTGCATATCCGCCCTG+TGG | - | chr8_1:52903448-52903467 | None:intergenic | 60.0% | |
| CCACAGGGCGGATATGCACA+TGG | + | chr8_1:52903445-52903464 | Msa1200320:CDS | 60.0% | |
| CAGGGCGGATATGCACATGG+TGG | + | chr8_1:52903448-52903467 | Msa1200320:CDS | 60.0% | |
| CACATGGGTCACATGGGCCA+CGG | + | chr8_1:52903475-52903494 | Msa1200320:CDS | 60.0% | |
| !! | GCTGGTGCTGCTGCACATGG+TGG | + | chr8_1:52902043-52902062 | Msa1200320:CDS | 65.0% |
| CCGCCATGTCCATGAGACCC+TGG | - | chr8_1:52903319-52903338 | None:intergenic | 65.0% | |
| GCTGCTGCTGCCGCTGCTTA+TGG | + | chr8_1:52903367-52903386 | Msa1200320:CDS | 65.0% | |
| ! | GTGAGCGCCGTGAGCACCAT+GGG | - | chr8_1:52903407-52903426 | None:intergenic | 65.0% |
| CATGGTGCTCACGGCGCTCA+CGG | + | chr8_1:52903406-52903425 | Msa1200320:CDS | 65.0% | |
| CACGGCGCTCACGGTTATCC+AGG | + | chr8_1:52903415-52903434 | Msa1200320:CDS | 65.0% | |
| GGCGCTCACGGTTATCCAGG+TGG | + | chr8_1:52903418-52903437 | Msa1200320:CDS | 65.0% | |
| ! | CGTGAGCGCCGTGAGCACCA+TGG | - | chr8_1:52903408-52903427 | None:intergenic | 70.0% |
| CCAGGTGGCTACCCACAGGG+CGG | + | chr8_1:52903433-52903452 | Msa1200320:CDS | 70.0% | |
| CCGCCCTGTGGGTAGCCACC+TGG | - | chr8_1:52903436-52903455 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 52901463 | 52903996 | 52901463 | ID=Msa1200320;Name=Msa1200320 |
| chr8_1 | mRNA | 52901463 | 52903996 | 52901463 | ID=Msa1200320-mRNA-1;Parent=Msa1200320;Name=Msa1200320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=149|1|1|1|0.5|0.33|3|390|180 |
| chr8_1 | exon | 52901463 | 52901587 | 52901463 | ID=Msa1200320-mRNA-1:exon:16896;Parent=Msa1200320-mRNA-1 |
| chr8_1 | exon | 52901947 | 52902226 | 52901947 | ID=Msa1200320-mRNA-1:exon:16897;Parent=Msa1200320-mRNA-1 |
| chr8_1 | exon | 52903320 | 52903996 | 52903320 | ID=Msa1200320-mRNA-1:exon:16898;Parent=Msa1200320-mRNA-1 |
| chr8_1 | five_prime_UTR | 52901463 | 52901587 | 52901463 | ID=Msa1200320-mRNA-1:five_prime_utr;Parent=Msa1200320-mRNA-1 |
| chr8_1 | five_prime_UTR | 52901947 | 52901970 | 52901947 | ID=Msa1200320-mRNA-1:five_prime_utr;Parent=Msa1200320-mRNA-1 |
| chr8_1 | CDS | 52901971 | 52902226 | 52901971 | ID=Msa1200320-mRNA-1:cds;Parent=Msa1200320-mRNA-1 |
| chr8_1 | CDS | 52903320 | 52903606 | 52903320 | ID=Msa1200320-mRNA-1:cds;Parent=Msa1200320-mRNA-1 |
| chr8_1 | three_prime_UTR | 52903607 | 52903996 | 52903607 | ID=Msa1200320-mRNA-1:three_prime_utr;Parent=Msa1200320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
