Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057400 | PQM40130.1 | 71.028 | 428 | 64 | 4 | 38 | 405 | 1 | 428 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057400 | sp|Q9FKS8|LHT1_ARATH | 84.828 | 290 | 41 | 2 | 38 | 324 | 1 | 290 | 1.53e-175 | 500 |
| Msa1057400 | sp|Q9FKS8|LHT1_ARATH | 74.713 | 87 | 22 | 0 | 319 | 405 | 360 | 446 | 2.76e-39 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057400 | A0A314URL0 | 71.028 | 428 | 64 | 4 | 38 | 405 | 1 | 428 | 0.0 | 601 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0631130 | Msa1057400 | 0.802987 | 4.322447e-49 | -8.615850e-47 |
| Msa0703030 | Msa1057400 | 0.814003 | 1.922430e-51 | -8.615850e-47 |
| Msa0744710 | Msa1057400 | 0.814482 | 1.506506e-51 | -8.615850e-47 |
| Msa0753930 | Msa1057400 | 0.825988 | 3.471050e-54 | -8.615850e-47 |
| Msa0758520 | Msa1057400 | 0.815921 | 7.215400e-52 | -8.615850e-47 |
| Msa0758570 | Msa1057400 | 0.817111 | 3.905798e-52 | -8.615850e-47 |
| Msa0765140 | Msa1057400 | 0.801391 | 9.204126e-49 | -8.615850e-47 |
| Msa0804870 | Msa1057400 | 0.806736 | 7.117806e-50 | -8.615850e-47 |
| Msa0817190 | Msa1057400 | 0.805885 | 1.075467e-49 | -8.615850e-47 |
| Msa0826240 | Msa1057400 | 0.811149 | 8.089647e-51 | -8.615850e-47 |
| Msa0838870 | Msa1057400 | 0.830657 | 2.595232e-55 | -8.615850e-47 |
| Msa0150620 | Msa1057400 | 0.821092 | 4.851853e-53 | -8.615850e-47 |
| Msa0186240 | Msa1057400 | 0.801319 | 9.525213e-49 | -8.615850e-47 |
| Msa0193190 | Msa1057400 | 0.809774 | 1.602644e-50 | -8.615850e-47 |
| Msa0218090 | Msa1057400 | 0.810028 | 1.412781e-50 | -8.615850e-47 |
| Msa0367860 | Msa1057400 | 0.819177 | 1.331688e-52 | -8.615850e-47 |
| Msa0393100 | Msa1057400 | 0.806629 | 7.498155e-50 | -8.615850e-47 |
| Msa0460600 | Msa1057400 | 0.808744 | 2.664694e-50 | -8.615850e-47 |
| Msa0478080 | Msa1057400 | 0.822009 | 2.978203e-53 | -8.615850e-47 |
| Msa1016100 | Msa1057400 | 0.889462 | 2.370163e-73 | -8.615850e-47 |
| Msa1030210 | Msa1057400 | 0.810518 | 1.107915e-50 | -8.615850e-47 |
| Msa1057400 | Msa1069250 | 0.811341 | 7.349678e-51 | -8.615850e-47 |
| Msa1057400 | Msa1071350 | 0.805430 | 1.340103e-49 | -8.615850e-47 |
| Msa1057400 | Msa1075090 | 0.806348 | 8.595015e-50 | -8.615850e-47 |
| Msa1057400 | Msa1077970 | 0.827484 | 1.524944e-54 | -8.615850e-47 |
| Msa1057400 | Msa1102210 | 0.864522 | 1.144311e-64 | -8.615850e-47 |
| Msa1057400 | Msa1111860 | 0.800220 | 1.596434e-48 | -8.615850e-47 |
| Msa1057400 | Msa1115980 | 0.801477 | 8.839905e-49 | -8.615850e-47 |
| Msa1057400 | Msa1120580 | 0.806222 | 9.135795e-50 | -8.615850e-47 |
| Msa1057400 | Msa1131120 | 0.813108 | 3.024000e-51 | -8.615850e-47 |
| Msa1057400 | Msa1202110 | 0.807901 | 4.031261e-50 | -8.615850e-47 |
| Msa1057400 | Msa1254870 | 0.804169 | 2.457765e-49 | -8.615850e-47 |
| Msa1057400 | Msa1328430 | 0.805082 | 1.585230e-49 | -8.615850e-47 |
| Msa1057400 | Msa1357570 | 0.803441 | 3.480486e-49 | -8.615850e-47 |
| Msa1057400 | Msa1395110 | 0.814100 | 1.829614e-51 | -8.615850e-47 |
| Msa1057400 | Msa1395250 | 0.817262 | 3.613323e-52 | -8.615850e-47 |
| Msa1057400 | Msa1427000 | 0.800910 | 1.154475e-48 | -8.615850e-47 |
| Msa1057400 | Msa1435320 | 0.825725 | 4.006905e-54 | -8.615850e-47 |
| Msa1057400 | Msa1443400 | 0.822609 | 2.161162e-53 | -8.615850e-47 |
| Msa1057400 | Msa1448040 | 0.825011 | 5.913197e-54 | -8.615850e-47 |
| Msa0271700 | Msa1057400 | 0.802204 | 6.267293e-49 | -8.615850e-47 |
| Msa0271720 | Msa1057400 | 0.806126 | 9.571745e-50 | -8.615850e-47 |
| Msa0273070 | Msa1057400 | 0.813645 | 2.304550e-51 | -8.615850e-47 |
| Msa0306310 | Msa1057400 | 0.828946 | 6.775462e-55 | -8.615850e-47 |
| Msa0345050 | Msa1057400 | 0.804643 | 1.957225e-49 | -8.615850e-47 |
| Msa0345890 | Msa1057400 | 0.853857 | 1.810881e-61 | -8.615850e-47 |
| Msa0497690 | Msa1057400 | 0.837002 | 6.720992e-57 | -8.615850e-47 |
| Msa0522170 | Msa1057400 | 0.806270 | 8.925324e-50 | -8.615850e-47 |
| Msa0566530 | Msa1057400 | 0.848557 | 5.680666e-60 | -8.615850e-47 |
| Msa0573950 | Msa1057400 | 0.813087 | 3.057188e-51 | -8.615850e-47 |
| Msa0843950 | Msa1057400 | 0.809990 | 1.439453e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057400 | MtrunA17_Chr7g0230011 | 97.561 | 287 | 7 | 0 | 38 | 324 | 1 | 287 | 0.0 | 574 |
| Msa1057400 | MtrunA17_Chr7g0230011 | 97.701 | 87 | 2 | 0 | 319 | 405 | 357 | 443 | 1.61e-53 | 184 |
| Msa1057400 | MtrunA17_Chr3g0122921 | 60.386 | 414 | 107 | 5 | 49 | 405 | 15 | 428 | 7.97e-173 | 489 |
| Msa1057400 | MtrunA17_Chr6g0458931 | 84.116 | 277 | 44 | 0 | 48 | 324 | 23 | 299 | 3.80e-171 | 486 |
| Msa1057400 | MtrunA17_Chr6g0458931 | 82.759 | 87 | 15 | 0 | 319 | 405 | 369 | 455 | 1.68e-45 | 162 |
| Msa1057400 | MtrunA17_Chr2g0331721 | 80.000 | 295 | 58 | 1 | 31 | 324 | 11 | 305 | 1.73e-169 | 482 |
| Msa1057400 | MtrunA17_Chr2g0331721 | 81.609 | 87 | 16 | 0 | 319 | 405 | 375 | 461 | 6.18e-35 | 134 |
| Msa1057400 | MtrunA17_Chr6g0459001 | 80.576 | 278 | 54 | 0 | 47 | 324 | 2 | 279 | 3.02e-167 | 477 |
| Msa1057400 | MtrunA17_Chr6g0459001 | 82.759 | 87 | 15 | 0 | 319 | 405 | 390 | 476 | 2.06e-28 | 116 |
| Msa1057400 | MtrunA17_Chr6g0459021 | 81.618 | 272 | 50 | 0 | 53 | 324 | 20 | 291 | 7.09e-165 | 470 |
| Msa1057400 | MtrunA17_Chr6g0459021 | 80.460 | 87 | 17 | 0 | 319 | 405 | 361 | 447 | 7.34e-27 | 111 |
| Msa1057400 | MtrunA17_Chr6g0458921 | 79.487 | 273 | 54 | 1 | 52 | 324 | 1 | 271 | 1.94e-158 | 453 |
| Msa1057400 | MtrunA17_Chr6g0458921 | 81.609 | 87 | 16 | 0 | 319 | 405 | 342 | 428 | 4.44e-28 | 114 |
| Msa1057400 | MtrunA17_Chr6g0459031 | 78.022 | 273 | 58 | 1 | 52 | 324 | 1 | 271 | 1.41e-156 | 448 |
| Msa1057400 | MtrunA17_Chr6g0459031 | 77.011 | 87 | 20 | 0 | 319 | 405 | 342 | 428 | 5.11e-26 | 108 |
| Msa1057400 | MtrunA17_Chr8g0376991 | 68.116 | 276 | 88 | 0 | 49 | 324 | 5 | 280 | 4.05e-141 | 409 |
| Msa1057400 | MtrunA17_Chr8g0376991 | 66.667 | 87 | 29 | 0 | 319 | 405 | 350 | 436 | 3.30e-33 | 129 |
| Msa1057400 | MtrunA17_Chr2g0328081 | 74.815 | 270 | 68 | 0 | 55 | 324 | 2 | 271 | 5.18e-141 | 409 |
| Msa1057400 | MtrunA17_Chr2g0328081 | 80.460 | 87 | 17 | 0 | 319 | 405 | 342 | 428 | 2.25e-27 | 112 |
| Msa1057400 | MtrunA17_Chr6g0459011 | 83.058 | 242 | 41 | 0 | 83 | 324 | 1 | 242 | 1.39e-139 | 404 |
| Msa1057400 | MtrunA17_Chr6g0459011 | 80.488 | 82 | 16 | 0 | 319 | 400 | 312 | 393 | 4.55e-27 | 111 |
| Msa1057400 | MtrunA17_Chr4g0057851 | 68.726 | 259 | 81 | 0 | 66 | 324 | 9 | 267 | 7.22e-132 | 385 |
| Msa1057400 | MtrunA17_Chr4g0057851 | 68.235 | 85 | 27 | 0 | 319 | 403 | 337 | 421 | 3.37e-33 | 129 |
| Msa1057400 | MtrunA17_Chr5g0422741 | 60.000 | 290 | 109 | 2 | 35 | 324 | 1 | 283 | 3.06e-125 | 369 |
| Msa1057400 | MtrunA17_Chr5g0422741 | 61.798 | 89 | 34 | 0 | 317 | 405 | 351 | 439 | 9.39e-21 | 93.6 |
| Msa1057400 | MtrunA17_Chr1g0198531 | 60.870 | 276 | 104 | 1 | 49 | 324 | 10 | 281 | 2.81e-120 | 356 |
| Msa1057400 | MtrunA17_Chr1g0198531 | 58.427 | 89 | 37 | 0 | 317 | 405 | 349 | 437 | 4.48e-19 | 88.6 |
| Msa1057400 | MtrunA17_Chr1g0198541 | 59.075 | 281 | 110 | 2 | 45 | 324 | 5 | 281 | 4.82e-117 | 348 |
| Msa1057400 | MtrunA17_Chr1g0198541 | 61.798 | 89 | 34 | 0 | 317 | 405 | 349 | 437 | 1.22e-20 | 93.2 |
| Msa1057400 | MtrunA17_Chr3g0077651 | 55.636 | 275 | 118 | 2 | 54 | 324 | 39 | 313 | 1.91e-107 | 324 |
| Msa1057400 | MtrunA17_Chr3g0077651 | 52.439 | 82 | 39 | 0 | 324 | 405 | 388 | 469 | 1.06e-11 | 66.2 |
| Msa1057400 | MtrunA17_Chr2g0281341 | 43.066 | 274 | 152 | 3 | 52 | 321 | 80 | 353 | 3.00e-68 | 224 |
| Msa1057400 | MtrunA17_Chr5g0406331 | 38.621 | 290 | 173 | 3 | 51 | 336 | 70 | 358 | 4.16e-63 | 211 |
| Msa1057400 | MtrunA17_Chr3g0143701 | 36.913 | 298 | 182 | 3 | 59 | 351 | 76 | 372 | 3.30e-59 | 200 |
| Msa1057400 | MtrunA17_Chr5g0406351 | 37.584 | 298 | 180 | 5 | 44 | 336 | 84 | 380 | 1.20e-58 | 199 |
| Msa1057400 | MtrunA17_Chr4g0038711 | 34.767 | 279 | 172 | 3 | 53 | 321 | 56 | 334 | 1.87e-52 | 182 |
| Msa1057400 | MtrunA17_Chr4g0038711 | 37.209 | 86 | 54 | 0 | 320 | 405 | 415 | 500 | 3.54e-11 | 64.7 |
| Msa1057400 | MtrunA17_Chr4g0027241 | 29.605 | 304 | 188 | 8 | 38 | 324 | 1 | 295 | 5.33e-30 | 120 |
| Msa1057400 | MtrunA17_Chr3g0140761 | 31.673 | 281 | 162 | 7 | 66 | 324 | 32 | 304 | 1.53e-29 | 119 |
| Msa1057400 | MtrunA17_Chr1g0146491 | 31.834 | 289 | 173 | 7 | 54 | 324 | 12 | 294 | 2.52e-29 | 119 |
| Msa1057400 | MtrunA17_Chr8g0387941 | 28.125 | 288 | 195 | 6 | 42 | 324 | 2 | 282 | 5.71e-28 | 114 |
| Msa1057400 | MtrunA17_Chr1g0198081 | 31.418 | 261 | 167 | 6 | 69 | 324 | 61 | 314 | 7.14e-26 | 108 |
| Msa1057400 | MtrunA17_Chr1g0206821 | 33.613 | 238 | 136 | 7 | 67 | 285 | 22 | 256 | 2.82e-24 | 104 |
| Msa1057400 | MtrunA17_Chr3g0125101 | 28.866 | 291 | 187 | 7 | 48 | 324 | 18 | 302 | 3.04e-24 | 104 |
| Msa1057400 | MtrunA17_Chr3g0125091 | 31.939 | 263 | 158 | 9 | 48 | 295 | 18 | 274 | 4.24e-24 | 103 |
| Msa1057400 | MtrunA17_Chr3g0103271 | 29.044 | 272 | 174 | 6 | 68 | 324 | 28 | 295 | 2.57e-23 | 101 |
| Msa1057400 | MtrunA17_Chr3g0125081 | 28.669 | 293 | 184 | 8 | 48 | 324 | 18 | 301 | 1.86e-22 | 99.0 |
| Msa1057400 | MtrunA17_Chr3g0130641 | 30.627 | 271 | 147 | 8 | 48 | 292 | 17 | 272 | 5.87e-22 | 97.4 |
| Msa1057400 | MtrunA17_Chr1g0159761 | 29.221 | 308 | 178 | 9 | 36 | 324 | 10 | 296 | 1.11e-21 | 96.7 |
| Msa1057400 | MtrunA17_Chr1g0206871 | 29.856 | 278 | 156 | 8 | 67 | 312 | 15 | 285 | 1.28e-21 | 96.7 |
| Msa1057400 | MtrunA17_Chr5g0447221 | 27.327 | 333 | 200 | 13 | 68 | 372 | 30 | 348 | 4.61e-21 | 94.7 |
| Msa1057400 | MtrunA17_Chr4g0037201 | 27.957 | 279 | 177 | 7 | 67 | 324 | 59 | 334 | 8.26e-21 | 94.4 |
| Msa1057400 | MtrunA17_Chr3g0103231 | 28.053 | 303 | 197 | 9 | 53 | 342 | 11 | 305 | 1.10e-20 | 93.6 |
| Msa1057400 | MtrunA17_Chr3g0130651 | 29.811 | 265 | 159 | 7 | 45 | 292 | 11 | 265 | 2.07e-20 | 92.8 |
| Msa1057400 | MtrunA17_Chr1g0184721 | 28.467 | 274 | 173 | 9 | 67 | 331 | 22 | 281 | 2.05e-19 | 89.7 |
| Msa1057400 | MtrunA17_Chr1g0146411 | 29.520 | 271 | 168 | 10 | 59 | 312 | 28 | 292 | 1.79e-18 | 87.0 |
| Msa1057400 | MtrunA17_Chr5g0447231 | 28.731 | 268 | 160 | 11 | 68 | 314 | 26 | 283 | 1.44e-17 | 84.3 |
| Msa1057400 | MtrunA17_Chr3g0103211 | 28.000 | 250 | 162 | 6 | 78 | 313 | 34 | 279 | 1.73e-17 | 84.0 |
| Msa1057400 | MtrunA17_Chr8g0384661 | 28.788 | 264 | 152 | 7 | 47 | 292 | 44 | 289 | 2.20e-17 | 84.0 |
| Msa1057400 | MtrunA17_Chr3g0140541 | 24.818 | 274 | 187 | 6 | 66 | 324 | 24 | 293 | 6.27e-17 | 82.4 |
| Msa1057400 | MtrunA17_Chr5g0402151 | 31.364 | 220 | 136 | 5 | 78 | 290 | 11 | 222 | 1.16e-16 | 79.7 |
| Msa1057400 | MtrunA17_Chr3g0103221 | 26.087 | 253 | 163 | 6 | 78 | 313 | 41 | 286 | 2.99e-16 | 80.5 |
| Msa1057400 | MtrunA17_Chr1g0146391 | 28.623 | 276 | 167 | 10 | 59 | 312 | 7 | 274 | 5.88e-16 | 79.3 |
| Msa1057400 | MtrunA17_Chr1g0146331 | 26.000 | 300 | 190 | 10 | 47 | 324 | 2 | 291 | 9.07e-15 | 75.9 |
| Msa1057400 | MtrunA17_Chr2g0293331 | 25.735 | 272 | 165 | 8 | 68 | 312 | 13 | 274 | 1.12e-14 | 75.5 |
| Msa1057400 | MtrunA17_Chr3g0140531 | 25.461 | 271 | 179 | 8 | 43 | 295 | 2 | 267 | 1.36e-13 | 72.0 |
| Msa1057400 | MtrunA17_Chr4g0058161 | 28.261 | 230 | 151 | 10 | 95 | 321 | 68 | 286 | 1.14e-12 | 69.3 |
| Msa1057400 | MtrunA17_Chr3g0130671 | 28.351 | 194 | 114 | 5 | 68 | 245 | 40 | 224 | 3.96e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057400 | AT5G40780.1 | 84.828 | 290 | 41 | 2 | 38 | 324 | 1 | 290 | 1.55e-176 | 500 |
| Msa1057400 | AT5G40780.1 | 74.713 | 87 | 22 | 0 | 319 | 405 | 360 | 446 | 2.80e-40 | 149 |
| Msa1057400 | AT1G24400.1 | 80.074 | 271 | 54 | 0 | 54 | 324 | 15 | 285 | 1.11e-160 | 459 |
| Msa1057400 | AT1G24400.1 | 68.966 | 87 | 27 | 0 | 319 | 405 | 355 | 441 | 5.27e-23 | 100 |
| Msa1057400 | AT1G48640.1 | 77.817 | 284 | 62 | 1 | 41 | 324 | 15 | 297 | 4.43e-157 | 451 |
| Msa1057400 | AT1G48640.1 | 74.713 | 87 | 22 | 0 | 319 | 405 | 367 | 453 | 2.02e-38 | 144 |
| Msa1057400 | AT1G67640.1 | 77.003 | 287 | 64 | 1 | 38 | 324 | 1 | 285 | 4.97e-157 | 450 |
| Msa1057400 | AT1G67640.1 | 68.966 | 87 | 27 | 0 | 319 | 405 | 355 | 441 | 9.05e-23 | 100 |
| Msa1057400 | AT5G40780.3 | 87.603 | 242 | 30 | 0 | 83 | 324 | 1 | 242 | 6.66e-152 | 436 |
| Msa1057400 | AT5G40780.3 | 74.713 | 87 | 22 | 0 | 319 | 405 | 312 | 398 | 2.57e-40 | 148 |
| Msa1057400 | AT5G40780.2 | 87.603 | 242 | 30 | 0 | 83 | 324 | 1 | 242 | 6.66e-152 | 436 |
| Msa1057400 | AT5G40780.2 | 74.713 | 87 | 22 | 0 | 319 | 405 | 312 | 398 | 2.57e-40 | 148 |
| Msa1057400 | AT1G61270.1 | 70.632 | 269 | 77 | 1 | 58 | 324 | 24 | 292 | 5.56e-135 | 394 |
| Msa1057400 | AT1G61270.1 | 55.952 | 84 | 37 | 0 | 319 | 402 | 362 | 445 | 8.26e-25 | 105 |
| Msa1057400 | AT3G01760.1 | 67.138 | 283 | 85 | 4 | 49 | 324 | 10 | 291 | 3.09e-132 | 387 |
| Msa1057400 | AT3G01760.1 | 58.537 | 82 | 34 | 0 | 319 | 400 | 361 | 442 | 6.09e-26 | 109 |
| Msa1057400 | AT1G25530.1 | 62.409 | 274 | 103 | 0 | 51 | 324 | 11 | 284 | 4.61e-120 | 356 |
| Msa1057400 | AT1G25530.1 | 60.920 | 87 | 34 | 0 | 319 | 405 | 354 | 440 | 2.89e-19 | 89.7 |
| Msa1057400 | AT1G71680.2 | 58.484 | 277 | 114 | 1 | 49 | 324 | 16 | 292 | 8.74e-106 | 317 |
| Msa1057400 | AT1G71680.1 | 58.484 | 277 | 114 | 1 | 49 | 324 | 16 | 292 | 2.30e-104 | 316 |
| Msa1057400 | AT1G71680.1 | 54.023 | 87 | 40 | 0 | 319 | 405 | 362 | 448 | 2.66e-17 | 84.0 |
| Msa1057400 | AT1G47670.1 | 42.701 | 274 | 153 | 3 | 52 | 321 | 78 | 351 | 7.53e-69 | 226 |
| Msa1057400 | AT4G35180.2 | 34.471 | 293 | 174 | 5 | 42 | 321 | 24 | 311 | 1.30e-51 | 176 |
| Msa1057400 | AT4G35180.1 | 35.069 | 288 | 169 | 5 | 42 | 316 | 24 | 306 | 1.34e-50 | 177 |
| Msa1057400 | AT1G08230.2 | 32.143 | 280 | 180 | 6 | 49 | 324 | 9 | 282 | 9.55e-30 | 120 |
| Msa1057400 | AT1G10010.1 | 32.237 | 304 | 169 | 11 | 45 | 324 | 7 | 297 | 4.57e-28 | 115 |
| Msa1057400 | AT1G10010.2 | 32.237 | 304 | 169 | 11 | 45 | 324 | 8 | 298 | 4.84e-28 | 115 |
| Msa1057400 | AT5G41800.1 | 28.736 | 261 | 174 | 6 | 69 | 324 | 28 | 281 | 2.90e-27 | 113 |
| Msa1057400 | AT1G58360.1 | 30.537 | 298 | 173 | 10 | 45 | 324 | 25 | 306 | 7.57e-25 | 106 |
| Msa1057400 | AT5G09220.1 | 30.556 | 288 | 158 | 9 | 47 | 312 | 39 | 306 | 1.12e-21 | 97.4 |
| Msa1057400 | AT5G49630.1 | 31.769 | 277 | 168 | 8 | 66 | 324 | 31 | 304 | 1.52e-21 | 96.7 |
| Msa1057400 | AT1G44100.1 | 28.065 | 310 | 192 | 9 | 38 | 324 | 1 | 302 | 3.40e-21 | 95.9 |
| Msa1057400 | AT5G63850.1 | 31.086 | 267 | 142 | 9 | 47 | 292 | 12 | 257 | 4.22e-21 | 95.5 |
| Msa1057400 | AT1G77380.1 | 27.875 | 287 | 181 | 8 | 56 | 324 | 20 | 298 | 1.73e-19 | 90.5 |
| Msa1057400 | AT5G23810.2 | 29.167 | 264 | 158 | 10 | 66 | 308 | 24 | 279 | 3.70e-17 | 82.8 |
| Msa1057400 | AT5G23810.1 | 27.682 | 289 | 171 | 10 | 47 | 308 | 2 | 279 | 3.87e-17 | 83.6 |
| Msa1057400 | AT5G23810.4 | 29.289 | 239 | 142 | 9 | 66 | 283 | 24 | 256 | 2.05e-15 | 76.3 |
| Msa1057400 | AT1G08230.3 | 32.973 | 185 | 116 | 5 | 139 | 321 | 1 | 179 | 1.39e-12 | 68.9 |
Find 95 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACTTGAACTCTATTTC+TGG | 0.163457 | 7_2:+38495035 | Msa1057400:CDS |
| TCGGATTGTATGAAAGAATT+TGG | 0.168544 | 7_2:+38496902 | Msa1057400:three_prime_UTR |
| TGTAGCTTTGTGCTACTTTC+CGG | 0.255496 | 7_2:+38495525 | Msa1057400:CDS |
| AATCATAACTCTTGGCATTA+AGG | 0.256791 | 7_2:-38496810 | None:intergenic |
| GTTATAGAAAATGTTGATTA+TGG | 0.261549 | 7_2:+38495325 | Msa1057400:CDS |
| GCATTTCTTGACGAACTAAT+TGG | 0.266230 | 7_2:-38494493 | None:intergenic |
| AATTCTTTCTCTAGTTACTA+TGG | 0.280827 | 7_2:+38490994 | Msa1057400:CDS |
| TCTCTGTTTAGTGTGGAATT+TGG | 0.307888 | 7_2:-38490926 | None:intergenic |
| TACTTTCCGGTTGCTCTCAT+TGG | 0.312154 | 7_2:+38495538 | Msa1057400:CDS |
| CCAGAAATAGAGTTCAAGTT+AGG | 0.313363 | 7_2:-38495035 | None:intergenic |
| AGTGTGGAATTTGGCCTTGC+TGG | 0.349020 | 7_2:-38490917 | None:intergenic |
| GAATTAGTAATATTTGTCTA+TGG | 0.351089 | 7_2:+38496939 | Msa1057400:three_prime_UTR |
| TTCGGTTTCTTCAATGCCCT+TGG | 0.366530 | 7_2:+38495379 | Msa1057400:CDS |
| CACATAAACTAAATGTTCCT+TGG | 0.371498 | 7_2:+38497141 | Msa1057400:three_prime_UTR |
| GGAGATTTAGCTTGTCTTGG+TGG | 0.375121 | 7_2:+38496594 | Msa1057400:CDS |
| TAGCTTACAAAGTATGTTGT+TGG | 0.377102 | 7_2:-38496456 | None:intergenic |
| TCATCACATTATACACGTTA+TGG | 0.383988 | 7_2:+38494742 | Msa1057400:CDS |
| CCAAGTTGCGCCATGGCATA+AGG | 0.384842 | 7_2:-38494580 | None:intergenic |
| AAGAAACCGAAGACAGTTCC+TGG | 0.385660 | 7_2:-38495367 | None:intergenic |
| AACATTGTCTACATGGTAAC+TGG | 0.392632 | 7_2:+38494900 | Msa1057400:CDS |
| GAACTGGGTCAATATGCTTT+TGG | 0.394335 | 7_2:+38494819 | Msa1057400:CDS |
| GTTCGTCAAGAAATGCAAAA+TGG | 0.402237 | 7_2:+38494500 | Msa1057400:CDS |
| CGCAAATGCATGAAAGAAAT+CGG | 0.405451 | 7_2:+38496883 | Msa1057400:three_prime_UTR |
| TATGGAACATCCATACATAT+TGG | 0.411330 | 7_2:+38496957 | Msa1057400:three_prime_UTR |
| GCACAAAGCTACAACTATAT+AGG | 0.415908 | 7_2:-38495515 | None:intergenic |
| CTCCACATAGGACCCTTAGA+TGG | 0.416492 | 7_2:-38495478 | None:intergenic |
| ATTATACACGTTATGGCAAA+TGG | 0.419864 | 7_2:+38494749 | Msa1057400:CDS |
| CTTCAATGCCCTTGGAGATG+TGG | 0.427219 | 7_2:+38495387 | Msa1057400:CDS |
| ATATAGGTTTGCATTGTGCT+TGG | 0.433236 | 7_2:+38496739 | Msa1057400:intron |
| CAAGGAGATTTAGCTTGTCT+TGG | 0.448250 | 7_2:+38496591 | Msa1057400:CDS |
| AGAATAGAAATCATAACTCT+TGG | 0.448654 | 7_2:-38496818 | None:intergenic |
| ATTGACCTCAATCCTCCAAT+AGG | 0.449419 | 7_2:-38496784 | None:intergenic |
| CAATAACCAATGAGAGCAAC+CGG | 0.459224 | 7_2:-38495544 | None:intergenic |
| CAGTTACTCTACAATTGCTT+GGG | 0.463934 | 7_2:+38495282 | Msa1057400:intron |
| TATCACCTATTGGAGGATTG+AGG | 0.465217 | 7_2:+38496779 | Msa1057400:CDS |
| GCAGTTACTCTACAATTGCT+TGG | 0.470215 | 7_2:+38495281 | Msa1057400:intron |
| ATAGTAACTAGAGAAAGAAT+TGG | 0.471123 | 7_2:-38490992 | None:intergenic |
| CCGCCGCTATCATGTCGTTA+AGG | 0.476124 | 7_2:+38495069 | Msa1057400:CDS |
| ACTACCCCAGGAACTGTCTT+CGG | 0.476626 | 7_2:+38495361 | Msa1057400:CDS |
| CCTTATGCCATGGCGCAACT+TGG | 0.477863 | 7_2:+38494580 | Msa1057400:CDS |
| TGGGCAGCTTCTGCTCATAA+AGG | 0.483954 | 7_2:+38495301 | Msa1057400:CDS |
| CACAATGTTACTGCCATGGT+TGG | 0.488589 | 7_2:+38494538 | Msa1057400:CDS |
| CAGAAATAGAGTTCAAGTTA+GGG | 0.490914 | 7_2:-38495034 | None:intergenic |
| CGGCGTTAACATTGTCTACA+TGG | 0.498519 | 7_2:+38494893 | Msa1057400:CDS |
| CAAGTTGCGCCATGGCATAA+GGG | 0.504930 | 7_2:-38494579 | None:intergenic |
| GACACTTACATCTGTGGGTG+CGG | 0.514292 | 7_2:-38491029 | None:intergenic |
| ATGCCATGGCGCAACTTGGA+TGG | 0.528431 | 7_2:+38494584 | Msa1057400:CDS |
| CAACAAGTTCACTAAAACAA+GGG | 0.530270 | 7_2:-38497055 | None:intergenic |
| AAGTAGCTGCAACAAAGTAA+AGG | 0.531136 | 7_2:+38496988 | Msa1057400:three_prime_UTR |
| GTTACTGCCATGGTTGGAGC+TGG | 0.535918 | 7_2:+38494544 | Msa1057400:CDS |
| CAAGACAAGCTAAATCTCCT+TGG | 0.538494 | 7_2:-38496590 | None:intergenic |
| TCTTAGTCTCCCTTATGCCA+TGG | 0.544235 | 7_2:+38494570 | Msa1057400:CDS |
| GTGTAGATGGAATTGTTGCT+TGG | 0.553420 | 7_2:-38495447 | None:intergenic |
| TTCAGCTACCATGCATAATG+TGG | 0.558234 | 7_2:+38496552 | Msa1057400:intron |
| AATGGTTGAGATGCATGAAA+TGG | 0.559811 | 7_2:+38494767 | Msa1057400:CDS |
| TACAAAGCTACGACTACCCC+AGG | 0.575799 | 7_2:+38495349 | Msa1057400:CDS |
| TAACAGTATTAGTCCTCTCA+TGG | 0.577651 | 7_2:+38494718 | Msa1057400:CDS |
| GGAACATCCATACATATTGG+TGG | 0.578939 | 7_2:+38496960 | Msa1057400:three_prime_UTR |
| CAACAACTTATTGTTGAAGT+CGG | 0.582713 | 7_2:+38494873 | Msa1057400:CDS |
| AAGCAAAAGCCACATCTCCA+AGG | 0.583498 | 7_2:-38495396 | None:intergenic |
| GAGATGCATGAAATGGTACC+CGG | 0.589392 | 7_2:+38494774 | Msa1057400:CDS |
| CAACCATGGCAGTAACATTG+TGG | 0.590369 | 7_2:-38494537 | None:intergenic |
| ACACTTACATCTGTGGGTGC+GGG | 0.590787 | 7_2:-38491028 | None:intergenic |
| GGCTTGCAATCTACAAGCCA+AGG | 0.591590 | 7_2:+38496573 | Msa1057400:CDS |
| GACAGAGACACTTACATCTG+TGG | 0.594020 | 7_2:-38491035 | None:intergenic |
| ACAATCACTCCTCTCCACAT+AGG | 0.605359 | 7_2:-38495490 | None:intergenic |
| AGAAACCGAAGACAGTTCCT+GGG | 0.607949 | 7_2:-38495366 | None:intergenic |
| AAGAACACCAGCTCCAACCA+TGG | 0.608052 | 7_2:-38494551 | None:intergenic |
| ACAGAGACACTTACATCTGT+GGG | 0.608392 | 7_2:-38491034 | None:intergenic |
| AACCATCTAAGGGTCCTATG+TGG | 0.613202 | 7_2:+38495476 | Msa1057400:CDS |
| AGGACTAATACTGTTACTCC+AGG | 0.615520 | 7_2:-38494711 | None:intergenic |
| AGCAAAAGCCACATCTCCAA+GGG | 0.623365 | 7_2:-38495395 | None:intergenic |
| AAATAGAGTTCAAGTTAGGG+AGG | 0.624445 | 7_2:-38495031 | None:intergenic |
| ATTGCAAGCCACATTATGCA+TGG | 0.627374 | 7_2:-38496560 | None:intergenic |
| ACAATTTGTAGTAATCGCCA+AGG | 0.631719 | 7_2:-38497158 | None:intergenic |
| ATACCATCCAAGTTGCGCCA+TGG | 0.632975 | 7_2:-38494587 | None:intergenic |
| ACAACAAGTTCACTAAAACA+AGG | 0.633236 | 7_2:-38497056 | None:intergenic |
| ATTCCACAATGTTACTGCCA+TGG | 0.635834 | 7_2:+38494534 | Msa1057400:CDS |
| AGCAACAATTCCATCTACAC+CGG | 0.636630 | 7_2:+38495450 | Msa1057400:CDS |
| TTTGATAGATATCATGAACT+GGG | 0.640129 | 7_2:+38494804 | Msa1057400:CDS |
| CGTCAAGAAATGCAAAATGG+TGG | 0.644321 | 7_2:+38494503 | Msa1057400:CDS |
| ACTTCAACAATAAGTTGTTG+TGG | 0.647739 | 7_2:-38494870 | None:intergenic |
| GTACCTTAACGACATGATAG+CGG | 0.653123 | 7_2:-38495072 | None:intergenic |
| TGCTTATGCTGGACACAACG+TGG | 0.655602 | 7_2:+38495414 | Msa1057400:CDS |
| GTGAGACAAGACAAAGTGAA+CGG | 0.655631 | 7_2:-38495009 | None:intergenic |
| AATTCCACACTAAACAGAGA+CGG | 0.657913 | 7_2:+38490929 | Msa1057400:CDS |
| ATTGTCTACATGGTAACTGG+AGG | 0.663381 | 7_2:+38494903 | Msa1057400:CDS |
| TCTAAGGGTCCTATGTGGAG+AGG | 0.663638 | 7_2:+38495481 | Msa1057400:CDS |
| AGTATATATAAGTAGACTAG+CGG | 0.673887 | 7_2:+38490887 | None:intergenic |
| AAAACCGTCTCTGTTTAGTG+TGG | 0.705963 | 7_2:-38490933 | None:intergenic |
| ATAATGTGATGAACCATGAG+AGG | 0.706479 | 7_2:-38494731 | None:intergenic |
| GAAACCGAAGACAGTTCCTG+GGG | 0.710796 | 7_2:-38495365 | None:intergenic |
| CCTTAACGACATGATAGCGG+CGG | 0.712758 | 7_2:-38495069 | None:intergenic |
| AGACAAGACAAAGTGAACGG+AGG | 0.734305 | 7_2:-38495006 | None:intergenic |
| CTAGCGGTGATATACCAGCA+AGG | 0.748743 | 7_2:+38490903 | Msa1057400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAAAAAAAAAAAAAA+AGG | - | chr7_2:38496067-38496086 | None:intergenic | 0.0% |
| !! | TATTAAATAAGGAAAAAATA+AGG | - | chr7_2:38491067-38491086 | None:intergenic | 10.0% |
| !! | AATATAATAATTCAAACAAA+AGG | - | chr7_2:38492705-38492724 | None:intergenic | 10.0% |
| !! | TTTGTTTGAATTATTATATT+TGG | + | chr7_2:38492705-38492724 | Msa1057400:intron | 10.0% |
| !!! | ATAGAATATAAAAGTATTTA+CGG | + | chr7_2:38492813-38492832 | Msa1057400:intron | 10.0% |
| !! | GTCAAAAAATAAAATAAAAT+AGG | + | chr7_2:38493116-38493135 | Msa1057400:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTAAG+GGG | + | chr7_2:38493272-38493291 | Msa1057400:intron | 10.0% |
| !! | TTTAAATATTCTTCATTAAA+TGG | + | chr7_2:38496643-38496662 | Msa1057400:intron | 10.0% |
| !!! | AAATCATGTCTTATTAAATA+AGG | - | chr7_2:38491078-38491097 | None:intergenic | 15.0% |
| !! | TGTATATTAGTAGAAAAATA+AGG | - | chr7_2:38491586-38491605 | None:intergenic | 15.0% |
| !! | AATATTATATAAGATGTTGT+TGG | + | chr7_2:38491615-38491634 | Msa1057400:intron | 15.0% |
| !!! | TTACAAAGTAACTTTTAATT+TGG | + | chr7_2:38492598-38492617 | Msa1057400:intron | 15.0% |
| !!! | TACAAAGTAACTTTTAATTT+GGG | + | chr7_2:38492599-38492618 | Msa1057400:intron | 15.0% |
| !!! | TTTTTTTTTGATGAGATATT+TGG | + | chr7_2:38492732-38492751 | Msa1057400:intron | 15.0% |
| !!! | ATTTTATTTTTTGACAAAAG+AGG | - | chr7_2:38493111-38493130 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTTTTAACTAG+AGG | - | chr7_2:38493306-38493325 | None:intergenic | 15.0% |
| !!! | ATTAAGTTTTTTCATTTGAT+AGG | - | chr7_2:38493516-38493535 | None:intergenic | 15.0% |
| !! | AATAAAAAAAATTACACACA+TGG | + | chr7_2:38493712-38493731 | Msa1057400:intron | 15.0% |
| !!! | TTTAATAAAAGTACCTATTA+AGG | + | chr7_2:38493867-38493886 | Msa1057400:intron | 15.0% |
| !!! | TTTTATTACTTTTTTAAACG+TGG | + | chr7_2:38494108-38494127 | Msa1057400:intron | 15.0% |
| !!! | GATTGTATTTTATTTTGTAA+GGG | + | chr7_2:38494284-38494303 | Msa1057400:intron | 15.0% |
| !!! | ATTGTATTTTATTTTGTAAG+GGG | + | chr7_2:38494285-38494304 | Msa1057400:intron | 15.0% |
| !!! | CGTTTTGATTTTTTATTTTT+CGG | + | chr7_2:38494399-38494418 | Msa1057400:intron | 15.0% |
| !!! | GTTTTGATTTTTTATTTTTC+GGG | + | chr7_2:38494400-38494419 | Msa1057400:intron | 15.0% |
| !! | TGTAATTTCATAAAATTCAA+AGG | - | chr7_2:38494675-38494694 | None:intergenic | 15.0% |
| !!! | TTTGTAGTTTTTTTTCTTAA+GGG | - | chr7_2:38495752-38495771 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTTTTTTTTCTTA+AGG | - | chr7_2:38495753-38495772 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTAATAAGAACC+TGG | + | chr7_2:38496694-38496713 | Msa1057400:intron | 15.0% |
| !!! | CTTTTTTTCATTGATTATAT+AGG | + | chr7_2:38496723-38496742 | Msa1057400:intron | 15.0% |
| !! | ATATATCACAAAAACAAAAT+GGG | - | chr7_2:38497090-38497109 | None:intergenic | 15.0% |
| !! | TATATATCACAAAAACAAAA+TGG | - | chr7_2:38497091-38497110 | None:intergenic | 15.0% |
| !! | AAGAATTGGTATGAAAAATA+AGG | - | chr7_2:38490981-38491000 | None:intergenic | 20.0% |
| !! | TGCAAATAAAAAAACTAACA+TGG | - | chr7_2:38491135-38491154 | None:intergenic | 20.0% |
| !! | GTATATAAGATCATCTAATA+TGG | - | chr7_2:38491492-38491511 | None:intergenic | 20.0% |
| !! | TAAAATCTATAGATAGAGAA+GGG | - | chr7_2:38492135-38492154 | None:intergenic | 20.0% |
| !! | ATAAAATCTATAGATAGAGA+AGG | - | chr7_2:38492136-38492155 | None:intergenic | 20.0% |
| !! | TCGTTAAATTTAATCTAGTT+AGG | - | chr7_2:38492275-38492294 | None:intergenic | 20.0% |
| !! | TACTAATAGTTACCATTAAT+TGG | + | chr7_2:38492403-38492422 | Msa1057400:intron | 20.0% |
| !! | AGAGAGTAATAAATAGTTAA+AGG | + | chr7_2:38492554-38492573 | Msa1057400:intron | 20.0% |
| !!! | CACAAAGTAACTTATAATTT+TGG | + | chr7_2:38492634-38492653 | Msa1057400:intron | 20.0% |
| !!! | AAGTAACTTATAATTTTGGT+TGG | + | chr7_2:38492638-38492657 | Msa1057400:intron | 20.0% |
| !! | ATAGAATCAATCATCTAAAT+TGG | - | chr7_2:38492998-38493017 | None:intergenic | 20.0% |
| !! | CTAGGTATTATCAAATTTAT+GGG | - | chr7_2:38493188-38493207 | None:intergenic | 20.0% |
| !! | AAACTTATATGTACTTTAAC+AGG | - | chr7_2:38493257-38493276 | None:intergenic | 20.0% |
| !!! | AAAAAACTTAATAGCTGTTT+TGG | + | chr7_2:38493524-38493543 | Msa1057400:intron | 20.0% |
| !!! | GCAATTTTTTTATTCTTAAG+AGG | - | chr7_2:38493550-38493569 | None:intergenic | 20.0% |
| !!! | GAATAAAAAAATTGCGATTT+TGG | + | chr7_2:38493555-38493574 | Msa1057400:intron | 20.0% |
| !!! | ATTGTATTTTACTTTGTTAG+GGG | - | chr7_2:38493582-38493601 | None:intergenic | 20.0% |
| !!! | GATTGTATTTTACTTTGTTA+GGG | - | chr7_2:38493583-38493602 | None:intergenic | 20.0% |
| !! | TAACAAAGTAAAATACAATC+CGG | + | chr7_2:38493583-38493602 | Msa1057400:intron | 20.0% |
| !!! | CATATTTAAGTACTTTTCAT+TGG | - | chr7_2:38493930-38493949 | None:intergenic | 20.0% |
| !! | TGTTTAATATGTAAAGATAG+TGG | - | chr7_2:38493955-38493974 | None:intergenic | 20.0% |
| !! | GTAATAAAATGTGTACTATT+TGG | - | chr7_2:38494097-38494116 | None:intergenic | 20.0% |
| !!! | GGATTGTATTTTATTTTGTA+AGG | + | chr7_2:38494283-38494302 | Msa1057400:intron | 20.0% |
| !!! | TCATATTGATTGATTAAAGA+CGG | - | chr7_2:38495120-38495139 | None:intergenic | 20.0% |
| !! | TAACAAAATTCATGTTTGAA+TGG | + | chr7_2:38495199-38495218 | Msa1057400:intron | 20.0% |
| !! | AACAAAATTCATGTTTGAAT+GGG | + | chr7_2:38495200-38495219 | Msa1057400:intron | 20.0% |
| !!! | GTTATAGAAAATGTTGATTA+TGG | + | chr7_2:38495325-38495344 | Msa1057400:CDS | 20.0% |
| !! | AAAAATTTAAAAATAGCACG+TGG | - | chr7_2:38495866-38495885 | None:intergenic | 20.0% |
| !!! | AAATTTTTTTTTTGGCTTTG+TGG | + | chr7_2:38495878-38495897 | Msa1057400:intron | 20.0% |
| !!! | AATTTTTTTTTTGGCTTTGT+GGG | + | chr7_2:38495879-38495898 | Msa1057400:intron | 20.0% |
| !!! | GATTTTGTAGTTTTTTTCTT+AGG | + | chr7_2:38495936-38495955 | Msa1057400:intron | 20.0% |
| !! | TAAGAGGTTATAAATTGAAA+TGG | - | chr7_2:38496013-38496032 | None:intergenic | 20.0% |
| !! | GAATTAGTAATATTTGTCTA+TGG | + | chr7_2:38496939-38496958 | Msa1057400:three_prime_UTR | 20.0% |
| ! | ATAGTAACTAGAGAAAGAAT+TGG | - | chr7_2:38490995-38491014 | None:intergenic | 25.0% |
| ! | AATTCTTTCTCTAGTTACTA+TGG | + | chr7_2:38490994-38491013 | Msa1057400:CDS | 25.0% |
| ! | CTGCATATGTACAATTTATA+TGG | + | chr7_2:38491192-38491211 | Msa1057400:intron | 25.0% |
| !! | ATTTTTCTTCTGTTTTGCAA+AGG | + | chr7_2:38491257-38491276 | Msa1057400:intron | 25.0% |
| ! | TAAGATCATCTAATATGGAA+CGG | - | chr7_2:38491487-38491506 | None:intergenic | 25.0% |
| ! | AACCAACTTATAATTTGAGA+CGG | + | chr7_2:38492010-38492029 | Msa1057400:intron | 25.0% |
| ! | ATTCACTTCATCTACAATTT+AGG | - | chr7_2:38492208-38492227 | None:intergenic | 25.0% |
| ! | TATAACCCTGGTTAATTTAA+TGG | - | chr7_2:38492251-38492270 | None:intergenic | 25.0% |
| ! | AATTAAGTGTGTCCAATTAA+TGG | - | chr7_2:38492418-38492437 | None:intergenic | 25.0% |
| !! | TCCTATAATTTAAGACAAAG+GGG | - | chr7_2:38492486-38492505 | None:intergenic | 25.0% |
| !! | GTCCTATAATTTAAGACAAA+GGG | - | chr7_2:38492487-38492506 | None:intergenic | 25.0% |
| !!! | TAACTTATAATTTTGGTTGG+AGG | + | chr7_2:38492641-38492660 | Msa1057400:intron | 25.0% |
| !!! | AACTTATAATTTTGGTTGGA+GGG | + | chr7_2:38492642-38492661 | Msa1057400:intron | 25.0% |
| ! | GTATATTCACATCAAACTAA+GGG | - | chr7_2:38492850-38492869 | None:intergenic | 25.0% |
| ! | GCTAGGTATTATCAAATTTA+TGG | - | chr7_2:38493189-38493208 | None:intergenic | 25.0% |
| !! | TTTAACAGCACATTTTGTAT+TGG | - | chr7_2:38493211-38493230 | None:intergenic | 25.0% |
| ! | TTTCATTTGATAGGTACTAA+AGG | - | chr7_2:38493507-38493526 | None:intergenic | 25.0% |
| !! | TTGTATTTTACTTTGTTAGG+GGG | - | chr7_2:38493581-38493600 | None:intergenic | 25.0% |
| !! | GGATTGTATTTTACTTTGTT+AGG | - | chr7_2:38493584-38493603 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | + | chr7_2:38494028-38494047 | Msa1057400:intron | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | + | chr7_2:38494029-38494048 | Msa1057400:intron | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr7_2:38494015-38494034 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | + | chr7_2:38494028-38494047 | Msa1057400:intron | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | + | chr7_2:38494029-38494048 | Msa1057400:intron | 25.0% |
| ! | TGCTATCAAAGCAATAAAAA+AGG | + | chr7_2:38494347-38494366 | Msa1057400:intron | 25.0% |
| ! | AAGGACATAAGAAATTCATT+TGG | + | chr7_2:38494366-38494385 | Msa1057400:intron | 25.0% |
| !! | TGAAATTACAATGTGTTTTC+AGG | + | chr7_2:38494685-38494704 | Msa1057400:intron | 25.0% |
| !! | GAAATTACAATGTGTTTTCA+GGG | + | chr7_2:38494686-38494705 | Msa1057400:intron | 25.0% |
| !! | AAATTACAATGTGTTTTCAG+GGG | + | chr7_2:38494687-38494706 | Msa1057400:intron | 25.0% |
| !! | ATATCTATCAAAACGTTTTC+CGG | - | chr7_2:38494796-38494815 | None:intergenic | 25.0% |
| !! | TTTTGATAGATATCATGAAC+TGG | + | chr7_2:38494803-38494822 | Msa1057400:CDS | 25.0% |
| ! | TTTGATAGATATCATGAACT+GGG | + | chr7_2:38494804-38494823 | Msa1057400:CDS | 25.0% |
| !!! | CAATTTGATTTTTTTGCAGT+CGG | - | chr7_2:38494964-38494983 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATCCATGTTAT+TGG | + | chr7_2:38495646-38495665 | Msa1057400:intron | 25.0% |
| !!! | ATTTTTTTTTTGGCTTTGTG+GGG | + | chr7_2:38495880-38495899 | Msa1057400:intron | 25.0% |
| !! | AGTTTTTGAACAATAGTAAG+AGG | - | chr7_2:38496029-38496048 | None:intergenic | 25.0% |
| ! | AATGAAAAAAAGATTAGACC+AGG | - | chr7_2:38496715-38496734 | None:intergenic | 25.0% |
| ! | AGAATAGAAATCATAACTCT+TGG | - | chr7_2:38496821-38496840 | None:intergenic | 25.0% |
| ! | ATTCTCCACATAAAAAATGA+TGG | + | chr7_2:38496848-38496867 | Msa1057400:three_prime_UTR | 25.0% |
| ! | TAAAAAATGATGGCAACTTT+AGG | + | chr7_2:38496858-38496877 | Msa1057400:three_prime_UTR | 25.0% |
| TAAGGAAAAAATAAGGAGAG+AGG | - | chr7_2:38491060-38491079 | None:intergenic | 30.0% | |
| ! | TTCTGTTTTGCAAAGGATAT+AGG | + | chr7_2:38491264-38491283 | Msa1057400:intron | 30.0% |
| ! | TTCTATTTAAAGCCCTATCA+CGG | - | chr7_2:38491377-38491396 | None:intergenic | 30.0% |
| ! | GAGGGAGTATATAATTTAGA+GGG | - | chr7_2:38491465-38491484 | None:intergenic | 30.0% |
| TCAAAATATGTCAGATTGTC+AGG | - | chr7_2:38491563-38491582 | None:intergenic | 30.0% | |
| CTAGATCATCTAATATACGA+CGG | + | chr7_2:38491748-38491767 | Msa1057400:intron | 30.0% | |
| ! | ACCAACTTATAATTTGAGAC+GGG | + | chr7_2:38492011-38492030 | Msa1057400:intron | 30.0% |
| !! | TATTTTTATCGATGAAGTCG+TGG | - | chr7_2:38492063-38492082 | None:intergenic | 30.0% |
| TCATCACCATTAAATTAACC+AGG | + | chr7_2:38492242-38492261 | Msa1057400:intron | 30.0% | |
| CATCACCATTAAATTAACCA+GGG | + | chr7_2:38492243-38492262 | Msa1057400:intron | 30.0% | |
| TTAACGATCAAGAAAACCAA+TGG | + | chr7_2:38492288-38492307 | Msa1057400:intron | 30.0% | |
| ! | CCTATAATTTAAGACAAAGG+GGG | - | chr7_2:38492485-38492504 | None:intergenic | 30.0% |
| ! | CGTCCTATAATTTAAGACAA+AGG | - | chr7_2:38492488-38492507 | None:intergenic | 30.0% |
| !! | AAAAGTATTTACGGATACTC+CGG | + | chr7_2:38492822-38492841 | Msa1057400:intron | 30.0% |
| CGTATATTCACATCAAACTA+AGG | - | chr7_2:38492851-38492870 | None:intergenic | 30.0% | |
| !! | CTCACTTTAAAATCCATCTT+AGG | + | chr7_2:38493140-38493159 | Msa1057400:intron | 30.0% |
| GTATATATTCAGACCTAAGA+TGG | - | chr7_2:38493156-38493175 | None:intergenic | 30.0% | |
| TCTTAGGTCTGAATATATAC+TGG | + | chr7_2:38493156-38493175 | Msa1057400:intron | 30.0% | |
| CTTAGGTCTGAATATATACT+GGG | + | chr7_2:38493157-38493176 | Msa1057400:intron | 30.0% | |
| TTATCACTTTCCATGAAGTT+TGG | + | chr7_2:38493417-38493436 | Msa1057400:intron | 30.0% | |
| TATCACTTTCCATGAAGTTT+GGG | + | chr7_2:38493418-38493437 | Msa1057400:intron | 30.0% | |
| CCTTATTAGTGTATTGTCAT+TGG | - | chr7_2:38493904-38493923 | None:intergenic | 30.0% | |
| CCAATGACAATACACTAATA+AGG | + | chr7_2:38493901-38493920 | Msa1057400:intron | 30.0% | |
| ! | AATTTTTCTTCCTCCAATAG+AGG | + | chr7_2:38494195-38494214 | Msa1057400:intron | 30.0% |
| ! | ATTTTTCTTCCTCCAATAGA+GGG | + | chr7_2:38494196-38494215 | Msa1057400:intron | 30.0% |
| !! | TATTGCTTTGATAGCAGTTT+TGG | - | chr7_2:38494343-38494362 | None:intergenic | 30.0% |
| TCATCACATTATACACGTTA+TGG | + | chr7_2:38494742-38494761 | Msa1057400:CDS | 30.0% | |
| ATTATACACGTTATGGCAAA+TGG | + | chr7_2:38494749-38494768 | Msa1057400:CDS | 30.0% | |
| ! | TATCTATCAAAACGTTTTCC+GGG | - | chr7_2:38494795-38494814 | None:intergenic | 30.0% |
| ! | ATATGCTTTTGGTGAAAAGT+TGG | + | chr7_2:38494830-38494849 | Msa1057400:CDS | 30.0% |
| ! | TATGCTTTTGGTGAAAAGTT+GGG | + | chr7_2:38494831-38494850 | Msa1057400:CDS | 30.0% |
| ACTTCAACAATAAGTTGTTG+TGG | - | chr7_2:38494873-38494892 | None:intergenic | 30.0% | |
| CAACAACTTATTGTTGAAGT+CGG | + | chr7_2:38494873-38494892 | Msa1057400:CDS | 30.0% | |
| ! | CAGAAATAGAGTTCAAGTTA+GGG | - | chr7_2:38495037-38495056 | None:intergenic | 30.0% |
| GATTGATTAAAGACGGTAAA+TGG | - | chr7_2:38495113-38495132 | None:intergenic | 30.0% | |
| AATTGAAATTGAGTTTCACC+TGG | - | chr7_2:38495678-38495697 | None:intergenic | 30.0% | |
| AGGTGAAACTCAATTTCAAT+TGG | + | chr7_2:38495677-38495696 | Msa1057400:intron | 30.0% | |
| ! | TCGCAACTTTGAAAAAGTTA+GGG | - | chr7_2:38495722-38495741 | None:intergenic | 30.0% |
| ! | ATCGCAACTTTGAAAAAGTT+AGG | - | chr7_2:38495723-38495742 | None:intergenic | 30.0% |
| GTTTCAATCATGTCAAATAC+TGG | - | chr7_2:38496149-38496168 | None:intergenic | 30.0% | |
| !! | GCTATTACTTTTCCGTTTTT+CGG | + | chr7_2:38496396-38496415 | Msa1057400:CDS | 30.0% |
| TAGCTTACAAAGTATGTTGT+TGG | - | chr7_2:38496459-38496478 | None:intergenic | 30.0% | |
| ! | TTGATGCTTTTATCACCTAT+TGG | + | chr7_2:38496769-38496788 | Msa1057400:CDS | 30.0% |
| AATCATAACTCTTGGCATTA+AGG | - | chr7_2:38496813-38496832 | None:intergenic | 30.0% | |
| !!! | AGTTGCCATCATTTTTTATG+TGG | - | chr7_2:38496856-38496875 | None:intergenic | 30.0% |
| TCGGATTGTATGAAAGAATT+TGG | + | chr7_2:38496902-38496921 | Msa1057400:three_prime_UTR | 30.0% | |
| TATGGAACATCCATACATAT+TGG | + | chr7_2:38496957-38496976 | Msa1057400:three_prime_UTR | 30.0% | |
| ! | TTTTTCTCCACCAATATGTA+TGG | - | chr7_2:38496970-38496989 | None:intergenic | 30.0% |
| CAACAAGTTCACTAAAACAA+GGG | - | chr7_2:38497058-38497077 | None:intergenic | 30.0% | |
| ACAACAAGTTCACTAAAACA+AGG | - | chr7_2:38497059-38497078 | None:intergenic | 30.0% | |
| CACATAAACTAAATGTTCCT+TGG | + | chr7_2:38497141-38497160 | Msa1057400:three_prime_UTR | 30.0% | |
| TCTCTGTTTAGTGTGGAATT+TGG | - | chr7_2:38490929-38490948 | None:intergenic | 35.0% | |
| AATTCCACACTAAACAGAGA+CGG | + | chr7_2:38490929-38490948 | Msa1057400:CDS | 35.0% | |
| TTAGGATATAGGAAAAGGCT+GGG | - | chr7_2:38491305-38491324 | None:intergenic | 35.0% | |
| AGAGGTTAGGATATAGGAAA+AGG | - | chr7_2:38491310-38491329 | None:intergenic | 35.0% | |
| CACTTAAGAGGTTAGGATAT+AGG | - | chr7_2:38491316-38491335 | None:intergenic | 35.0% | |
| CTATATCCTAACCTCTTAAG+TGG | + | chr7_2:38491314-38491333 | Msa1057400:intron | 35.0% | |
| ! | TATTTTCCCAACCACTTAAG+AGG | - | chr7_2:38491328-38491347 | None:intergenic | 35.0% |
| ! | TCTATTTAAAGCCCTATCAC+GGG | - | chr7_2:38491376-38491395 | None:intergenic | 35.0% |
| GTACAACTTTAGACAAGCAT+GGG | - | chr7_2:38491438-38491457 | None:intergenic | 35.0% | |
| AGTACAACTTTAGACAAGCA+TGG | - | chr7_2:38491439-38491458 | None:intergenic | 35.0% | |
| ! | GGAGGGAGTATATAATTTAG+AGG | - | chr7_2:38491466-38491485 | None:intergenic | 35.0% |
| ATCATCTAATATGGAACGGA+GGG | - | chr7_2:38491483-38491502 | None:intergenic | 35.0% | |
| GATGATCTTATATACTCCCT+CGG | + | chr7_2:38491497-38491516 | Msa1057400:intron | 35.0% | |
| ATCATCTAATATGAGACCGA+GGG | - | chr7_2:38491516-38491535 | None:intergenic | 35.0% | |
| ATCATCTAATATACGACGGA+GGG | + | chr7_2:38491752-38491771 | Msa1057400:intron | 35.0% | |
| ACCCGTCTCAAATTATAAGT+TGG | - | chr7_2:38492015-38492034 | None:intergenic | 35.0% | |
| CACAAAACAAAGAGAAAGAG+AGG | - | chr7_2:38492159-38492178 | None:intergenic | 35.0% | |
| CCCCCTTTGTCTTAAATTAT+AGG | + | chr7_2:38492482-38492501 | Msa1057400:intron | 35.0% | |
| CTAAGATAAAGACATGCACT+TGG | + | chr7_2:38493375-38493394 | Msa1057400:intron | 35.0% | |
| !! | AGCATTGACTTGGTCAAAAT+TGG | - | chr7_2:38493745-38493764 | None:intergenic | 35.0% |
| !! | AGCATTGACTTGGTCAAAAT+TGG | + | chr7_2:38493745-38493764 | Msa1057400:intron | 35.0% |
| CATTTAAGGAGTCCTTGTTA+GGG | - | chr7_2:38493814-38493833 | None:intergenic | 35.0% | |
| TATCTCTCCTGAGTAACTAA+CGG | - | chr7_2:38494137-38494156 | None:intergenic | 35.0% | |
| TTAGTTACTCAGGAGAGATA+GGG | + | chr7_2:38494137-38494156 | Msa1057400:intron | 35.0% | |
| AAGGAACGAGCAACTATATA+AGG | - | chr7_2:38494164-38494183 | None:intergenic | 35.0% | |
| GAAAAATTGAGTCCCTGTTA+AGG | - | chr7_2:38494183-38494202 | None:intergenic | 35.0% | |
| ! | GACAAAAAGCAATTGATGAC+TGG | + | chr7_2:38494467-38494486 | Msa1057400:CDS | 35.0% |
| GCATTTCTTGACGAACTAAT+TGG | - | chr7_2:38494496-38494515 | None:intergenic | 35.0% | |
| GTTCGTCAAGAAATGCAAAA+TGG | + | chr7_2:38494500-38494519 | Msa1057400:CDS | 35.0% | |
| TAACAGTATTAGTCCTCTCA+TGG | + | chr7_2:38494718-38494737 | Msa1057400:CDS | 35.0% | |
| ATAATGTGATGAACCATGAG+AGG | - | chr7_2:38494734-38494753 | None:intergenic | 35.0% | |
| AATGGTTGAGATGCATGAAA+TGG | + | chr7_2:38494767-38494786 | Msa1057400:CDS | 35.0% | |
| ! | AAATAGAGTTCAAGTTAGGG+AGG | - | chr7_2:38495034-38495053 | None:intergenic | 35.0% |
| ! | CCAGAAATAGAGTTCAAGTT+AGG | - | chr7_2:38495038-38495057 | None:intergenic | 35.0% |
| CCTAACTTGAACTCTATTTC+TGG | + | chr7_2:38495035-38495054 | Msa1057400:CDS | 35.0% | |
| AAGCAATTGTAGAGTAACTG+CGG | - | chr7_2:38495282-38495301 | None:intergenic | 35.0% | |
| CAGTTACTCTACAATTGCTT+GGG | + | chr7_2:38495282-38495301 | Msa1057400:intron | 35.0% | |
| GCACAAAGCTACAACTATAT+AGG | - | chr7_2:38495518-38495537 | None:intergenic | 35.0% | |
| ! | CTCATTGGTTATTGGATGTT+TGG | + | chr7_2:38495553-38495572 | Msa1057400:intron | 35.0% |
| ! | TGACTTTAGAGAAACCAAAC+TGG | + | chr7_2:38495602-38495621 | Msa1057400:intron | 35.0% |
| ! | GCAACTTTGAAAAAGTTAGG+GGG | - | chr7_2:38495720-38495739 | None:intergenic | 35.0% |
| ! | CGCAACTTTGAAAAAGTTAG+GGG | - | chr7_2:38495721-38495740 | None:intergenic | 35.0% |
| ! | TTTTGCAACTGCAGCAATTT+CGG | - | chr7_2:38495906-38495925 | None:intergenic | 35.0% |
| TGACATGATTGAAACAGTGA+TGG | + | chr7_2:38496154-38496173 | Msa1057400:intron | 35.0% | |
| ATAAATCGCAACATTGTGGT+AGG | - | chr7_2:38496200-38496219 | None:intergenic | 35.0% | |
| CACAATAAATCGCAACATTG+TGG | - | chr7_2:38496204-38496223 | None:intergenic | 35.0% | |
| TATTGTGCGAAATGTGTATG+TGG | + | chr7_2:38496217-38496236 | Msa1057400:intron | 35.0% | |
| ATTGTGCGAAATGTGTATGT+GGG | + | chr7_2:38496218-38496237 | Msa1057400:intron | 35.0% | |
| !! | ATTACTTTTCCGTTTTTCGG+TGG | + | chr7_2:38496399-38496418 | Msa1057400:CDS | 35.0% |
| ATATAGGTTTGCATTGTGCT+TGG | + | chr7_2:38496739-38496758 | Msa1057400:intron | 35.0% | |
| ! | ATGCTTTTATCACCTATTGG+AGG | + | chr7_2:38496772-38496791 | Msa1057400:CDS | 35.0% |
| CGCAAATGCATGAAAGAAAT+CGG | + | chr7_2:38496883-38496902 | Msa1057400:three_prime_UTR | 35.0% | |
| AAGTAGCTGCAACAAAGTAA+AGG | + | chr7_2:38496988-38497007 | Msa1057400:three_prime_UTR | 35.0% | |
| ACAATTTGTAGTAATCGCCA+AGG | - | chr7_2:38497161-38497180 | None:intergenic | 35.0% | |
| AAAACCGTCTCTGTTTAGTG+TGG | - | chr7_2:38490936-38490955 | None:intergenic | 40.0% | |
| ACAGAGACACTTACATCTGT+GGG | - | chr7_2:38491037-38491056 | None:intergenic | 40.0% | |
| TAGGATATAGGAAAAGGCTG+GGG | - | chr7_2:38491304-38491323 | None:intergenic | 40.0% | |
| GTTAGGATATAGGAAAAGGC+TGG | - | chr7_2:38491306-38491325 | None:intergenic | 40.0% | |
| ATCCTAACCTCTTAAGTGGT+TGG | + | chr7_2:38491318-38491337 | Msa1057400:intron | 40.0% | |
| TCCTAACCTCTTAAGTGGTT+GGG | + | chr7_2:38491319-38491338 | Msa1057400:intron | 40.0% | |
| ATGGGTGACACAAATCTAAC+GGG | - | chr7_2:38491420-38491439 | None:intergenic | 40.0% | |
| CATGGGTGACACAAATCTAA+CGG | - | chr7_2:38491421-38491440 | None:intergenic | 40.0% | |
| GATCATCTAATATGGAACGG+AGG | - | chr7_2:38491484-38491503 | None:intergenic | 40.0% | |
| GATCATCTAATATGAGACCG+AGG | - | chr7_2:38491517-38491536 | None:intergenic | 40.0% | |
| GATCATCTAATATACGACGG+AGG | + | chr7_2:38491751-38491770 | Msa1057400:intron | 40.0% | |
| TCTATAGATAGAGAAGGGTG+TGG | - | chr7_2:38492130-38492149 | None:intergenic | 40.0% | |
| !!! | CTCTTTGTTTTGTGCCTTGA+AGG | + | chr7_2:38492165-38492184 | Msa1057400:intron | 40.0% |
| ATCTCACATTCTCACCTTCA+AGG | - | chr7_2:38492182-38492201 | None:intergenic | 40.0% | |
| ATCTAGTTAGGCTATAACCC+TGG | - | chr7_2:38492263-38492282 | None:intergenic | 40.0% | |
| !!! | AAGGGGGTATGTTCTAGTTT+TGG | - | chr7_2:38492469-38492488 | None:intergenic | 40.0% |
| TCACATCAAACTAAGGGAAC+CGG | - | chr7_2:38492844-38492863 | None:intergenic | 40.0% | |
| TCTTAACCATGTGCTTGAGA+GGG | - | chr7_2:38492886-38492905 | None:intergenic | 40.0% | |
| TCAAGCACATGGTTAAGACT+GGG | + | chr7_2:38492888-38492907 | Msa1057400:intron | 40.0% | |
| !!! | CAGCACATTTTGTATTGGCT+AGG | - | chr7_2:38493206-38493225 | None:intergenic | 40.0% |
| CTAATAGCTCCCAAACTTCA+TGG | - | chr7_2:38493430-38493449 | None:intergenic | 40.0% | |
| CAAAAGGAGCAGTACTTAGA+GGG | - | chr7_2:38493609-38493628 | None:intergenic | 40.0% | |
| ! | TACTGCTCCTTTTGCAGTTT+TGG | + | chr7_2:38493615-38493634 | Msa1057400:intron | 40.0% |
| ! | TCTGAGACCAAAACTGCAAA+AGG | - | chr7_2:38493625-38493644 | None:intergenic | 40.0% |
| TTGTTAGGGAACTACCATTG+TGG | - | chr7_2:38493800-38493819 | None:intergenic | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr7_2:38493799-38493818 | Msa1057400:intron | 40.0% | |
| CCATTTAAGGAGTCCTTGTT+AGG | - | chr7_2:38493815-38493834 | None:intergenic | 40.0% | |
| CCTAACAAGGACTCCTTAAA+TGG | + | chr7_2:38493812-38493831 | Msa1057400:intron | 40.0% | |
| AATAAGTGATGTGTCACGTG+AGG | - | chr7_2:38493839-38493858 | None:intergenic | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | - | chr7_2:38493883-38493902 | None:intergenic | 40.0% | |
| ATCTCTCCTGAGTAACTAAC+GGG | - | chr7_2:38494136-38494155 | None:intergenic | 40.0% | |
| GTTAGTTACTCAGGAGAGAT+AGG | + | chr7_2:38494136-38494155 | Msa1057400:intron | 40.0% | |
| ATAGTTGCTCGTTCCTTAAC+AGG | + | chr7_2:38494167-38494186 | Msa1057400:intron | 40.0% | |
| TAGTTGCTCGTTCCTTAACA+GGG | + | chr7_2:38494168-38494187 | Msa1057400:intron | 40.0% | |
| ! | GGAGTGTTCCTTGTTAAGTA+AGG | + | chr7_2:38494230-38494249 | Msa1057400:intron | 40.0% |
| !! | TTCCTAAGAGCATCTCCAAT+GGG | - | chr7_2:38494260-38494279 | None:intergenic | 40.0% |
| CGCAACTTCCTAATACTTAG+CGG | + | chr7_2:38494316-38494335 | Msa1057400:intron | 40.0% | |
| GCAACTTCCTAATACTTAGC+GGG | + | chr7_2:38494317-38494336 | Msa1057400:intron | 40.0% | |
| CGTCAAGAAATGCAAAATGG+TGG | + | chr7_2:38494503-38494522 | Msa1057400:CDS | 40.0% | |
| ATTCCACAATGTTACTGCCA+TGG | + | chr7_2:38494534-38494553 | Msa1057400:CDS | 40.0% | |
| AGGACTAATACTGTTACTCC+AGG | - | chr7_2:38494714-38494733 | None:intergenic | 40.0% | |
| ! | GAACTGGGTCAATATGCTTT+TGG | + | chr7_2:38494819-38494838 | Msa1057400:CDS | 40.0% |
| ATTGTCTACATGGTAACTGG+AGG | + | chr7_2:38494903-38494922 | Msa1057400:CDS | 40.0% | |
| GTGAGACAAGACAAAGTGAA+CGG | - | chr7_2:38495012-38495031 | None:intergenic | 40.0% | |
| GTACCTTAACGACATGATAG+CGG | - | chr7_2:38495075-38495094 | None:intergenic | 40.0% | |
| GCAGTTACTCTACAATTGCT+TGG | + | chr7_2:38495281-38495300 | Msa1057400:intron | 40.0% | |
| GTGTAGATGGAATTGTTGCT+TGG | - | chr7_2:38495450-38495469 | None:intergenic | 40.0% | |
| AGCAACAATTCCATCTACAC+CGG | + | chr7_2:38495450-38495469 | Msa1057400:CDS | 40.0% | |
| TACACCGGAAAAACCATCTA+AGG | + | chr7_2:38495465-38495484 | Msa1057400:CDS | 40.0% | |
| ACACCGGAAAAACCATCTAA+GGG | + | chr7_2:38495466-38495485 | Msa1057400:CDS | 40.0% | |
| !! | TGTAGCTTTGTGCTACTTTC+CGG | + | chr7_2:38495525-38495544 | Msa1057400:CDS | 40.0% |
| CAATAACCAATGAGAGCAAC+CGG | - | chr7_2:38495547-38495566 | None:intergenic | 40.0% | |
| ! | ACCAAACTGGCTTATTGCAA+TGG | + | chr7_2:38495615-38495634 | Msa1057400:intron | 40.0% |
| TGCCACAAGTGCAAAACTTA+GGG | - | chr7_2:38495781-38495800 | None:intergenic | 40.0% | |
| ! | TTTTGCACTTGTGGCAGTTT+TGG | + | chr7_2:38495785-38495804 | Msa1057400:intron | 40.0% |
| !! | ACCGAGTCAAAATTGGTCTT+GGG | - | chr7_2:38495813-38495832 | None:intergenic | 40.0% |
| TTGCTGCAGTTGCAAAACTT+AGG | + | chr7_2:38495909-38495928 | Msa1057400:intron | 40.0% | |
| TGCTGCAGTTGCAAAACTTA+GGG | + | chr7_2:38495910-38495929 | Msa1057400:intron | 40.0% | |
| ! | CTTTCACGAAGTTGCGATTT+TGG | - | chr7_2:38495965-38495984 | None:intergenic | 40.0% |
| ATCGCAACTTCGTGAAAGTT+AGG | + | chr7_2:38495967-38495986 | Msa1057400:intron | 40.0% | |
| TCGCAACTTCGTGAAAGTTA+GGG | + | chr7_2:38495968-38495987 | Msa1057400:intron | 40.0% | |
| !!! | GGTGGTCTACTAGGATTTTT+TGG | + | chr7_2:38496417-38496436 | Msa1057400:CDS | 40.0% |
| !!! | GGTCTACTAGGATTTTTTGG+TGG | + | chr7_2:38496420-38496439 | Msa1057400:CDS | 40.0% |
| TTCAGCTACCATGCATAATG+TGG | + | chr7_2:38496552-38496571 | Msa1057400:intron | 40.0% | |
| ATTGCAAGCCACATTATGCA+TGG | - | chr7_2:38496563-38496582 | None:intergenic | 40.0% | |
| CAAGACAAGCTAAATCTCCT+TGG | - | chr7_2:38496593-38496612 | None:intergenic | 40.0% | |
| !! | CAAGGAGATTTAGCTTGTCT+TGG | + | chr7_2:38496591-38496610 | Msa1057400:CDS | 40.0% |
| TATCACCTATTGGAGGATTG+AGG | + | chr7_2:38496779-38496798 | Msa1057400:CDS | 40.0% | |
| ATTGACCTCAATCCTCCAAT+AGG | - | chr7_2:38496787-38496806 | None:intergenic | 40.0% | |
| GGAACATCCATACATATTGG+TGG | + | chr7_2:38496960-38496979 | Msa1057400:three_prime_UTR | 40.0% | |
| GACAGAGACACTTACATCTG+TGG | - | chr7_2:38491038-38491057 | None:intergenic | 45.0% | |
| TCCCAACCACTTAAGAGGTT+AGG | - | chr7_2:38491323-38491342 | None:intergenic | 45.0% | |
| ! | GATAGAGAAGGGTGTGGATT+GGG | - | chr7_2:38492124-38492143 | None:intergenic | 45.0% |
| ! | AGATAGAGAAGGGTGTGGAT+TGG | - | chr7_2:38492125-38492144 | None:intergenic | 45.0% |
| GTCAACCAAGGATAAGAGGA+GGG | - | chr7_2:38492323-38492342 | None:intergenic | 45.0% | |
| TCACGTCAACCAAGGATAAG+AGG | - | chr7_2:38492327-38492346 | None:intergenic | 45.0% | |
| ACGTCATTTCACGTCAACCA+AGG | - | chr7_2:38492335-38492354 | None:intergenic | 45.0% | |
| CTTAACCATGTGCTTGAGAG+GGG | - | chr7_2:38492885-38492904 | None:intergenic | 45.0% | |
| GTCTTAACCATGTGCTTGAG+AGG | - | chr7_2:38492887-38492906 | None:intergenic | 45.0% | |
| CTCAAGCACATGGTTAAGAC+TGG | + | chr7_2:38492887-38492906 | Msa1057400:intron | 45.0% | |
| ! | CTTAGCCTGACTTTTCTGCA+TGG | - | chr7_2:38493360-38493379 | None:intergenic | 45.0% |
| GCAAAAGGAGCAGTACTTAG+AGG | - | chr7_2:38493610-38493629 | None:intergenic | 45.0% | |
| TGACCAAGTCAATGCTAACG+TGG | + | chr7_2:38493652-38493671 | Msa1057400:intron | 45.0% | |
| !! | AGACCACGTTAGCATTGACT+TGG | - | chr7_2:38493658-38493677 | None:intergenic | 45.0% |
| !! | TGACTTGGTCAAAATTGGCC+TGG | + | chr7_2:38493750-38493769 | Msa1057400:intron | 45.0% |
| ! | GACTTGGTCAAAATTGGCCT+GGG | + | chr7_2:38493751-38493770 | Msa1057400:intron | 45.0% |
| ! | ACTTGGTCAAAATTGGCCTG+GGG | + | chr7_2:38493752-38493771 | Msa1057400:intron | 45.0% |
| !! | GATGCTCTAAGTACCGCTTT+TGG | - | chr7_2:38493778-38493797 | None:intergenic | 45.0% |
| ! | GGTACTTAGAGCATCCACAA+TGG | + | chr7_2:38493783-38493802 | Msa1057400:intron | 45.0% |
| TGTCACGTGAGGTCCATTTA+AGG | - | chr7_2:38493828-38493847 | None:intergenic | 45.0% | |
| CTCCAATAGAGGGTCCTTAA+CGG | + | chr7_2:38494206-38494225 | Msa1057400:intron | 45.0% | |
| TCCAATAGAGGGTCCTTAAC+GGG | + | chr7_2:38494207-38494226 | Msa1057400:intron | 45.0% | |
| TGGGAGGTCCTTACTTAACA+AGG | - | chr7_2:38494241-38494260 | None:intergenic | 45.0% | |
| GTTAAGTAAGGACCTCCCAT+TGG | + | chr7_2:38494242-38494261 | Msa1057400:intron | 45.0% | |
| !! | CTTCCTAAGAGCATCTCCAA+TGG | - | chr7_2:38494261-38494280 | None:intergenic | 45.0% |
| !! | GTTTTGGCCCGCTAAGTATT+AGG | - | chr7_2:38494327-38494346 | None:intergenic | 45.0% |
| CAACCATGGCAGTAACATTG+TGG | - | chr7_2:38494540-38494559 | None:intergenic | 45.0% | |
| CACAATGTTACTGCCATGGT+TGG | + | chr7_2:38494538-38494557 | Msa1057400:CDS | 45.0% | |
| TCTTAGTCTCCCTTATGCCA+TGG | + | chr7_2:38494570-38494589 | Msa1057400:CDS | 45.0% | |
| GAGATGCATGAAATGGTACC+CGG | + | chr7_2:38494774-38494793 | Msa1057400:CDS | 45.0% | |
| AGACAAGACAAAGTGAACGG+AGG | - | chr7_2:38495009-38495028 | None:intergenic | 45.0% | |
| AGAAACCGAAGACAGTTCCT+GGG | - | chr7_2:38495369-38495388 | None:intergenic | 45.0% | |
| AAGAAACCGAAGACAGTTCC+TGG | - | chr7_2:38495370-38495389 | None:intergenic | 45.0% | |
| TTCGGTTTCTTCAATGCCCT+TGG | + | chr7_2:38495379-38495398 | Msa1057400:CDS | 45.0% | |
| AGCAAAAGCCACATCTCCAA+GGG | - | chr7_2:38495398-38495417 | None:intergenic | 45.0% | |
| AAGCAAAAGCCACATCTCCA+AGG | - | chr7_2:38495399-38495418 | None:intergenic | 45.0% | |
| ! | GATGTGGCTTTTGCTTATGC+TGG | + | chr7_2:38495403-38495422 | Msa1057400:CDS | 45.0% |
| ! | GATGGTTTTTCCGGTGTAGA+TGG | - | chr7_2:38495463-38495482 | None:intergenic | 45.0% |
| ! | GGACCCTTAGATGGTTTTTC+CGG | - | chr7_2:38495472-38495491 | None:intergenic | 45.0% |
| AACCATCTAAGGGTCCTATG+TGG | + | chr7_2:38495476-38495495 | Msa1057400:CDS | 45.0% | |
| ACAATCACTCCTCTCCACAT+AGG | - | chr7_2:38495493-38495512 | None:intergenic | 45.0% | |
| TACTTTCCGGTTGCTCTCAT+TGG | + | chr7_2:38495538-38495557 | Msa1057400:CDS | 45.0% | |
| ! | CGGTTGCTCTCATTGGTTAT+TGG | + | chr7_2:38495545-38495564 | Msa1057400:intron | 45.0% |
| GCCATTGCAATAAGCCAGTT+TGG | - | chr7_2:38495619-38495638 | None:intergenic | 45.0% | |
| CCTGGTAGCTTCCAATAACA+TGG | - | chr7_2:38495660-38495679 | None:intergenic | 45.0% | |
| CCATGTTATTGGAAGCTACC+AGG | + | chr7_2:38495657-38495676 | Msa1057400:intron | 45.0% | |
| CCACAAGTGCAAAACTTAGG+GGG | - | chr7_2:38495779-38495798 | None:intergenic | 45.0% | |
| GCCACAAGTGCAAAACTTAG+GGG | - | chr7_2:38495780-38495799 | None:intergenic | 45.0% | |
| CTGCCACAAGTGCAAAACTT+AGG | - | chr7_2:38495782-38495801 | None:intergenic | 45.0% | |
| !! | CGAGTCAAAATTGGTCTTGG+GGG | - | chr7_2:38495811-38495830 | None:intergenic | 45.0% |
| !! | CCGAGTCAAAATTGGTCTTG+GGG | - | chr7_2:38495812-38495831 | None:intergenic | 45.0% |
| !!! | CCCCAAGACCAATTTTGACT+CGG | + | chr7_2:38495809-38495828 | Msa1057400:intron | 45.0% |
| ! | GACCGAGTCAAAATTGGTCT+TGG | - | chr7_2:38495814-38495833 | None:intergenic | 45.0% |
| AGCGTAGACCGAGTCAAAAT+TGG | - | chr7_2:38495820-38495839 | None:intergenic | 45.0% | |
| GCTGCAGTTGCAAAACTTAG+GGG | + | chr7_2:38495911-38495930 | Msa1057400:intron | 45.0% | |
| CTGCAGTTGCAAAACTTAGG+GGG | + | chr7_2:38495912-38495931 | Msa1057400:intron | 45.0% | |
| CGCAACTTCGTGAAAGTTAG+GGG | + | chr7_2:38495969-38495988 | Msa1057400:intron | 45.0% | |
| GCAACTTCGTGAAAGTTAGG+GGG | + | chr7_2:38495970-38495989 | Msa1057400:intron | 45.0% | |
| GCAATGAACATTGTGAACGC+TGG | - | chr7_2:38496378-38496397 | None:intergenic | 45.0% | |
| CCTAGTAGACCACCGAAAAA+CGG | - | chr7_2:38496411-38496430 | None:intergenic | 45.0% | |
| !! | GGAGATTTAGCTTGTCTTGG+TGG | + | chr7_2:38496594-38496613 | Msa1057400:CDS | 45.0% |
| !! | AATTAAATTAAAATAAAAGA+TGG | + | chr7_2:38492083-38492102 | Msa1057400:intron | 5.0% |
| !! | TTATTATAATTATTACTATT+AGG | - | chr7_2:38492379-38492398 | None:intergenic | 5.0% |
| !!! | ATATTATTAAGTTTTTTTTT+TGG | - | chr7_2:38493036-38493055 | None:intergenic | 5.0% |
| !!! | TAAGTTTTTTTTTTTTTTTA+AGG | + | chr7_2:38493270-38493289 | Msa1057400:intron | 5.0% |
| !!! | AAGTTTTTTTTTTTTTTTAA+GGG | + | chr7_2:38493271-38493290 | Msa1057400:intron | 5.0% |
| !!! | CTATTTTTAAATTTTTTTTT+TGG | + | chr7_2:38495870-38495889 | Msa1057400:intron | 5.0% |
| !!! | AAAAATTGTTTTTTTTTTTT+TGG | + | chr7_2:38496260-38496279 | Msa1057400:intron | 5.0% |
| CTAGCGGTGATATACCAGCA+AGG | + | chr7_2:38490903-38490922 | Msa1057400:CDS | 50.0% | |
| !! | AGTGTGGAATTTGGCCTTGC+TGG | - | chr7_2:38490920-38490939 | None:intergenic | 50.0% |
| ACACTTACATCTGTGGGTGC+GGG | - | chr7_2:38491031-38491050 | None:intergenic | 50.0% | |
| GACACTTACATCTGTGGGTG+CGG | - | chr7_2:38491032-38491051 | None:intergenic | 50.0% | |
| TCTACGAGAGACCCGTGATA+GGG | + | chr7_2:38491362-38491381 | Msa1057400:intron | 50.0% | |
| TGATGCCCTCCTCTTATCCT+TGG | + | chr7_2:38492315-38492334 | Msa1057400:intron | 50.0% | |
| CGTCAACCAAGGATAAGAGG+AGG | - | chr7_2:38492324-38492343 | None:intergenic | 50.0% | |
| TCGAGCCATGCAGAAAAGTC+AGG | + | chr7_2:38493352-38493371 | Msa1057400:intron | 50.0% | |
| TGACCAAGTCAATGCTGACG+TGG | - | chr7_2:38493741-38493760 | None:intergenic | 50.0% | |
| GTGGAACCCGTTAGTTACTC+AGG | + | chr7_2:38494127-38494146 | Msa1057400:intron | 50.0% | |
| CGTTAAGGACCCTCTATTGG+AGG | - | chr7_2:38494208-38494227 | None:intergenic | 50.0% | |
| CCAATAGAGGGTCCTTAACG+GGG | + | chr7_2:38494208-38494227 | Msa1057400:intron | 50.0% | |
| CAATAGAGGGTCCTTAACGG+GGG | + | chr7_2:38494209-38494228 | Msa1057400:intron | 50.0% | |
| !! | CTAAGAGCATCTCCAATGGG+AGG | - | chr7_2:38494257-38494276 | None:intergenic | 50.0% |
| CTCCCATTGGAGATGCTCTT+AGG | + | chr7_2:38494255-38494274 | Msa1057400:intron | 50.0% | |
| TGGAGATGCTCTTAGGAAGC+TGG | + | chr7_2:38494262-38494281 | Msa1057400:intron | 50.0% | |
| AAGAACACCAGCTCCAACCA+TGG | - | chr7_2:38494554-38494573 | None:intergenic | 50.0% | |
| CAAGTTGCGCCATGGCATAA+GGG | - | chr7_2:38494582-38494601 | None:intergenic | 50.0% | |
| ATACCATCCAAGTTGCGCCA+TGG | - | chr7_2:38494590-38494609 | None:intergenic | 50.0% | |
| !! | CAATGTGTTTTCAGGGGTCC+TGG | + | chr7_2:38494693-38494712 | Msa1057400:intron | 50.0% |
| !! | CCTTAACGACATGATAGCGG+CGG | - | chr7_2:38495072-38495091 | None:intergenic | 50.0% |
| TGGGCAGCTTCTGCTCATAA+AGG | + | chr7_2:38495301-38495320 | Msa1057400:CDS | 50.0% | |
| TACAAAGCTACGACTACCCC+AGG | + | chr7_2:38495349-38495368 | Msa1057400:CDS | 50.0% | |
| ACTACCCCAGGAACTGTCTT+CGG | + | chr7_2:38495361-38495380 | Msa1057400:CDS | 50.0% | |
| GAAACCGAAGACAGTTCCTG+GGG | - | chr7_2:38495368-38495387 | None:intergenic | 50.0% | |
| CTTCAATGCCCTTGGAGATG+TGG | + | chr7_2:38495387-38495406 | Msa1057400:CDS | 50.0% | |
| TGCTTATGCTGGACACAACG+TGG | + | chr7_2:38495414-38495433 | Msa1057400:CDS | 50.0% | |
| CTCCACATAGGACCCTTAGA+TGG | - | chr7_2:38495481-38495500 | None:intergenic | 50.0% | |
| TCTAAGGGTCCTATGTGGAG+AGG | + | chr7_2:38495481-38495500 | Msa1057400:CDS | 50.0% | |
| CAAGTGCAAAACTTAGGGGG+CGG | - | chr7_2:38495776-38495795 | None:intergenic | 50.0% | |
| ! | CCCCCTAAGTTTTGCACTTG+TGG | + | chr7_2:38495776-38495795 | Msa1057400:intron | 50.0% |
| !! | CCGTTTTTCGGTGGTCTACT+AGG | + | chr7_2:38496408-38496427 | Msa1057400:CDS | 50.0% |
| GGCTTGCAATCTACAAGCCA+AGG | + | chr7_2:38496573-38496592 | Msa1057400:CDS | 50.0% | |
| GTCTACGAGAGACCCGTGAT+AGG | + | chr7_2:38491361-38491380 | Msa1057400:intron | 55.0% | |
| CCATGTGCTTGAGAGGGGAT+GGG | - | chr7_2:38492880-38492899 | None:intergenic | 55.0% | |
| ACCATGTGCTTGAGAGGGGA+TGG | - | chr7_2:38492881-38492900 | None:intergenic | 55.0% | |
| AGGAGCAGTACTTAGAGGGC+CGG | - | chr7_2:38493605-38493624 | None:intergenic | 55.0% | |
| !! | CGTCCACGTCAGCATTGACT+TGG | + | chr7_2:38493735-38493754 | Msa1057400:intron | 55.0% |
| ! | AATTGGCCTGGGGCCAAAAG+CGG | + | chr7_2:38493762-38493781 | Msa1057400:intron | 55.0% |
| !! | TAAGTACCGCTTTTGGCCCC+AGG | - | chr7_2:38493771-38493790 | None:intergenic | 55.0% |
| CCCCGTTAAGGACCCTCTAT+TGG | - | chr7_2:38494211-38494230 | None:intergenic | 55.0% | |
| CAAGGAACACTCCCCCGTTA+AGG | - | chr7_2:38494223-38494242 | None:intergenic | 55.0% | |
| GTTACTGCCATGGTTGGAGC+TGG | + | chr7_2:38494544-38494563 | Msa1057400:CDS | 55.0% | |
| CCAAGTTGCGCCATGGCATA+AGG | - | chr7_2:38494583-38494602 | None:intergenic | 55.0% | |
| CCTTATGCCATGGCGCAACT+TGG | + | chr7_2:38494580-38494599 | Msa1057400:CDS | 55.0% | |
| ATGCCATGGCGCAACTTGGA+TGG | + | chr7_2:38494584-38494603 | Msa1057400:CDS | 55.0% | |
| CCGCCGCTATCATGTCGTTA+AGG | + | chr7_2:38495069-38495088 | Msa1057400:CDS | 55.0% | |
| !! | TGACTCGGTCTACGCTGATG+TGG | + | chr7_2:38495824-38495843 | Msa1057400:intron | 55.0% |
| CTGATGTGGCACCCTAAGTG+AGG | + | chr7_2:38495838-38495857 | Msa1057400:intron | 55.0% | |
| AGCACGTGGCACCTCACTTA+GGG | - | chr7_2:38495852-38495871 | None:intergenic | 55.0% | |
| TAGCACGTGGCACCTCACTT+AGG | - | chr7_2:38495853-38495872 | None:intergenic | 55.0% | |
| !! | AGGAGGGCATCACGTGCCAT+TGG | - | chr7_2:38492307-38492326 | None:intergenic | 60.0% |
| CCCATCCCCTCTCAAGCACA+TGG | + | chr7_2:38492877-38492896 | Msa1057400:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 38490902 | 38497186 | 38490902 | ID=Msa1057400;Name=Msa1057400 |
| chr7_2 | mRNA | 38490902 | 38497186 | 38490902 | ID=Msa1057400-mRNA-1;Parent=Msa1057400;Name=Msa1057400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.83|0.71|1|0.83|1|7|343|405 |
| chr7_2 | exon | 38490902 | 38491042 | 38490902 | ID=Msa1057400-mRNA-1:exon:7310;Parent=Msa1057400-mRNA-1 |
| chr7_2 | exon | 38494448 | 38494605 | 38494448 | ID=Msa1057400-mRNA-1:exon:7311;Parent=Msa1057400-mRNA-1 |
| chr7_2 | exon | 38494707 | 38495090 | 38494707 | ID=Msa1057400-mRNA-1:exon:7312;Parent=Msa1057400-mRNA-1 |
| chr7_2 | exon | 38495285 | 38495559 | 38495285 | ID=Msa1057400-mRNA-1:exon:7313;Parent=Msa1057400-mRNA-1 |
| chr7_2 | exon | 38496379 | 38496470 | 38496379 | ID=Msa1057400-mRNA-1:exon:7314;Parent=Msa1057400-mRNA-1 |
| chr7_2 | exon | 38496557 | 38496625 | 38496557 | ID=Msa1057400-mRNA-1:exon:7315;Parent=Msa1057400-mRNA-1 |
| chr7_2 | exon | 38496745 | 38497186 | 38496745 | ID=Msa1057400-mRNA-1:exon:7316;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38490902 | 38491042 | 38490902 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38494448 | 38494605 | 38494448 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38494707 | 38495090 | 38494707 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38495285 | 38495559 | 38495285 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38496379 | 38496470 | 38496379 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38496557 | 38496625 | 38496557 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | CDS | 38496745 | 38496843 | 38496745 | ID=Msa1057400-mRNA-1:cds;Parent=Msa1057400-mRNA-1 |
| chr7_2 | three_prime_UTR | 38496844 | 38497186 | 38496844 | ID=Msa1057400-mRNA-1:three_prime_utr;Parent=Msa1057400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
