AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0497690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0497690 MtrunA17_Chr3g0093091 86.475 939 31 2 1 843 1 939 0.0 1649
Msa0497690 MtrunA17_Chr4g0060401 62.208 942 229 5 10 842 8 931 0.0 1159
Msa0497690 MtrunA17_Chr4g0060501 62.109 958 210 7 10 843 6 934 0.0 1134
Msa0497690 MtrunA17_Chr4g0060431 62.206 934 217 8 8 832 2 908 0.0 1081
Msa0497690 MtrunA17_Chr4g0060421 70.925 454 89 1 433 843 1 454 0.0 656
Msa0497690 MtrunA17_Chr4g0060411 51.452 482 143 7 10 425 6 462 4.42e-143 431
Msa0497690 MtrunA17_Chr4g0060471 69.338 287 45 1 600 843 1 287 5.60e-135 403
Msa0497690 MtrunA17_Chr4g0060451 65.801 231 68 3 288 518 6 225 3.73e-97 302
Msa0497690 MtrunA17_Chr7g0257341 27.121 601 334 17 309 833 306 878 3.07e-48 186
Msa0497690 MtrunA17_Chr7g0257341 28.974 497 282 15 291 754 1191 1649 1.30e-42 168
Msa0497690 MtrunA17_Chr3g0093041 28.773 497 266 15 425 837 13 505 2.15e-45 172
Msa0497690 MtrunA17_Chr3g0132711 28.185 518 266 17 416 837 13 520 2.55e-42 164
Msa0497690 MtrunA17_Chr4g0060461 74.074 54 14 0 540 593 2 55 1.68e-22 91.3
Msa0497690 MtrunA17_Chr4g0060441 33.529 170 61 3 9 145 11 161 5.39e-22 94.4
Msa0497690 MtrunA17_Chr3g0130331 27.354 223 139 5 530 746 20 225 4.01e-18 89.4
Msa0497690 MtrunA17_Chr1g0202431 30.220 182 122 3 579 757 45 224 1.37e-16 84.3
Msa0497690 MtrunA17_Chr2g0316301 32.022 178 108 5 579 746 65 239 5.18e-16 82.4
Msa0497690 MtrunA17_Chr8g0384391 29.677 155 103 3 596 746 68 220 5.60e-16 82.4
Msa0497690 MtrunA17_Chr7g0249091 29.444 180 108 6 581 746 97 271 1.65e-15 79.0
Msa0497690 MtrunA17_Chr5g0433051 27.485 171 117 3 581 746 478 646 3.70e-14 76.6
Msa0497690 MtrunA17_Chr7g0264631 25.385 260 162 11 532 775 396 639 1.78e-13 74.7
Msa0497690 MtrunA17_Chr7g0264631 24.895 237 154 7 541 767 1064 1286 4.64e-11 67.0
Msa0497690 MtrunA17_Chr3g0119381 24.916 297 177 12 474 745 305 580 2.74e-13 74.3
Msa0497690 MtrunA17_Chr3g0128381 27.778 180 120 6 573 747 399 573 2.93e-13 73.6
Msa0497690 MtrunA17_Chr7g0263351 27.228 202 130 4 560 746 96 295 3.79e-13 73.6
Msa0497690 MtrunA17_Chr6g0452111 23.585 318 197 14 481 772 281 578 3.87e-13 73.6
Msa0497690 MtrunA17_Chr8g0393191 28.324 173 111 5 576 737 58 228 5.68e-13 72.8
Msa0497690 MtrunA17_Chr8g0393151 28.834 163 110 4 585 745 36 194 6.36e-13 69.7
Msa0497690 MtrunA17_Chr1g0180601 24.710 259 165 10 532 775 369 612 8.71e-13 72.8
Msa0497690 MtrunA17_Chr1g0180601 25.366 205 135 6 573 767 1064 1260 3.67e-11 67.4
Msa0497690 MtrunA17_Chr5g0410921 23.853 218 143 8 537 745 967 1170 1.06e-12 72.4
Msa0497690 MtrunA17_Chr5g0411621 23.695 249 172 6 575 807 42 288 1.68e-12 71.2
Msa0497690 MtrunA17_Chr1g0213091 29.480 173 112 3 582 746 120 290 1.83e-12 71.2
Msa0497690 MtrunA17_Chr6g0452041 24.603 252 157 11 537 772 337 571 2.04e-12 71.2
Msa0497690 MtrunA17_Chr6g0452141 24.424 217 145 7 537 745 338 543 3.72e-12 70.5
Msa0497690 MtrunA17_Chr4g0065231 26.901 171 112 4 585 745 76 243 7.88e-12 68.9
Msa0497690 MtrunA17_Chr1g0199471 27.429 175 113 5 582 746 515 685 2.07e-11 68.2
Msa0497690 MtrunA17_Chr6g0451881 23.651 241 154 10 545 772 348 571 2.39e-11 67.8
Msa0497690 MtrunA17_Chr4g0041871 27.119 177 109 6 573 739 352 518 2.51e-11 67.8
Msa0497690 MtrunA17_Chr1g0208391 31.667 180 100 6 582 746 91 262 2.70e-11 67.4
Msa0497690 MtrunA17_Chr4g0050221 26.744 172 109 5 577 737 24 189 4.38e-11 66.6
Msa0497690 MtrunA17_Chr7g0227391 24.581 179 122 5 573 745 434 605 5.90e-11 66.2
Msa0497690 MtrunA17_Chr7g0264441 28.834 163 102 5 582 734 277 435 6.86e-11 66.2
Msa0497690 MtrunA17_Chr1g0198931 28.571 175 109 5 595 757 118 288 1.00e-10 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0497690 AT3G47780.1 57.431 942 281 8 10 843 6 935 0.0 1019
Msa0497690 AT3G47790.1 56.432 925 280 8 8 836 4 901 0.0 1012
Msa0497690 AT3G47740.1 54.729 941 305 10 10 843 6 932 0.0 991
Msa0497690 AT3G47760.3 53.919 944 312 10 10 843 6 936 0.0 979
Msa0497690 AT3G47750.1 54.286 945 308 10 10 843 6 937 0.0 978
Msa0497690 AT5G61700.1 54.555 933 304 11 10 843 6 917 0.0 957
Msa0497690 AT3G47770.2 53.042 937 307 11 11 834 7 923 0.0 941
Msa0497690 AT3G47760.1 52.704 943 285 11 10 843 6 896 0.0 931
Msa0497690 AT3G47790.3 58.207 792 251 7 8 746 4 768 0.0 905
Msa0497690 AT3G47760.2 51.377 944 306 14 10 843 6 906 0.0 894
Msa0497690 AT3G47770.1 50.735 952 280 12 11 834 7 897 0.0 885
Msa0497690 AT5G61740.1 52.784 934 315 13 9 843 3 909 0.0 870
Msa0497690 AT5G61740.2 51.071 934 297 13 9 843 3 875 0.0 855
Msa0497690 AT5G61700.2 55.359 793 277 10 10 746 6 777 0.0 834
Msa0497690 AT5G61700.4 55.359 793 277 10 10 746 6 777 0.0 834
Msa0497690 AT5G61740.3 53.165 790 253 9 151 843 1 770 0.0 790
Msa0497690 AT3G47790.2 60.998 641 187 5 160 746 18 649 0.0 769
Msa0497690 AT5G61700.3 52.545 727 268 10 10 680 6 711 0.0 713
Msa0497690 AT3G47770.3 48.805 711 274 10 11 651 7 697 0.0 650
Msa0497690 AT3G47730.1 28.846 624 338 19 305 837 244 852 2.58e-59 219
Msa0497690 AT5G61690.2 27.994 618 350 19 305 837 246 853 9.44e-54 202
Msa0497690 AT5G61730.1 28.642 611 339 18 305 837 247 838 1.54e-51 195
Msa0497690 AT5G61690.1 27.670 618 351 20 305 837 246 852 1.61e-51 195
Msa0497690 AT2G41700.1 27.288 601 335 19 309 833 299 873 1.65e-50 194
Msa0497690 AT2G41700.1 31.458 480 294 13 291 754 1184 1644 1.86e-46 181
Msa0497690 AT5G61730.2 28.618 615 344 18 305 837 247 848 2.41e-50 192
Msa0497690 AT2G41700.2 27.303 608 341 20 303 833 210 793 4.47e-49 189
Msa0497690 AT2G41700.2 34.639 332 198 8 434 754 1279 1602 9.23e-43 169
Msa0497690 AT4G25750.1 33.728 169 102 5 583 747 29 191 1.71e-19 93.6
Msa0497690 AT5G52860.1 31.361 169 113 2 579 747 39 204 1.41e-18 90.9
Msa0497690 AT1G65410.1 30.556 180 106 6 581 746 96 270 1.29e-16 82.8
Msa0497690 AT2G13610.1 27.461 193 134 3 558 746 36 226 6.00e-16 82.8
Msa0497690 AT1G53270.1 32.571 175 104 6 581 746 47 216 1.43e-15 81.3
Msa0497690 AT1G67940.1 29.310 174 115 4 585 754 45 214 4.99e-15 76.6
Msa0497690 AT5G58270.1 25.434 173 122 3 580 747 490 660 4.87e-14 76.6
Msa0497690 AT1G70610.2 25.556 180 121 5 573 746 283 455 3.84e-13 73.6
Msa0497690 AT1G70610.1 25.556 180 121 5 573 746 464 636 4.05e-13 73.6
Msa0497690 AT2G37010.2 28.571 175 113 5 581 746 497 668 5.36e-13 73.6
Msa0497690 AT2G37010.1 28.571 175 113 5 581 746 497 668 5.36e-13 73.6
Msa0497690 AT3G55100.1 30.460 174 109 5 594 757 61 232 8.27e-13 72.8
Msa0497690 AT3G55100.2 30.460 174 109 5 594 757 61 232 8.27e-13 72.8
Msa0497690 AT1G51500.1 27.094 203 129 6 567 756 27 223 9.12e-13 72.4
Msa0497690 AT3G55090.1 31.056 161 101 3 594 746 117 275 1.32e-12 72.0
Msa0497690 AT5G13580.1 30.435 161 102 3 594 746 118 276 2.18e-12 71.2
Msa0497690 AT5G19410.2 28.659 164 105 4 588 741 79 240 2.66e-12 70.9
Msa0497690 AT5G19410.1 28.659 164 105 4 588 741 70 231 2.82e-12 70.9
Msa0497690 AT2G39350.1 30.435 161 102 3 594 746 119 277 2.93e-12 70.9
Msa0497690 AT1G27940.2 26.396 197 115 6 569 748 795 978 3.37e-12 70.9
Msa0497690 AT1G27940.2 26.512 215 135 7 568 771 162 364 1.40e-11 68.9
Msa0497690 AT1G27940.1 26.396 197 115 6 569 748 1009 1192 3.76e-12 70.9
Msa0497690 AT1G27940.1 26.512 215 135 7 568 771 376 578 1.29e-11 69.3
Msa0497690 AT1G10680.2 25.676 222 147 9 560 771 357 570 4.06e-12 70.9
Msa0497690 AT2G01320.3 30.682 176 107 4 582 746 88 259 4.31e-12 70.5
Msa0497690 AT2G01320.1 30.682 176 107 4 582 746 88 259 4.41e-12 70.5
Msa0497690 AT2G01320.4 30.682 176 107 4 582 746 88 259 4.41e-12 70.5
Msa0497690 AT1G10680.1 25.676 222 147 9 560 771 357 570 4.43e-12 70.9
Msa0497690 AT2G01320.2 30.682 176 107 4 582 746 88 259 4.53e-12 70.5
Msa0497690 AT2G01320.8 30.682 176 107 4 582 746 88 259 5.17e-12 70.1
Msa0497690 AT2G01320.5 30.682 176 107 4 582 746 88 259 5.17e-12 70.1
Msa0497690 AT2G01320.7 32.317 164 96 4 582 734 88 247 5.26e-12 69.7
Msa0497690 AT2G01320.6 32.317 164 96 4 582 734 88 247 5.26e-12 69.7
Msa0497690 AT3G55130.1 29.545 176 115 4 579 746 94 268 6.37e-12 69.7
Msa0497690 AT3G55110.1 31.056 161 102 4 594 746 101 260 7.64e-12 69.7
Msa0497690 AT5G46540.1 23.182 220 145 7 537 745 981 1187 8.23e-12 69.7
Msa0497690 AT3G21090.1 24.352 193 129 5 556 737 17 203 8.33e-12 69.3
Msa0497690 AT2G37360.1 29.193 161 104 3 594 746 143 301 9.29e-12 69.3
Msa0497690 AT4G25960.1 25.359 209 142 8 573 773 410 612 1.10e-11 69.3
Msa0497690 AT4G25960.1 24.725 182 119 7 573 745 1039 1211 2.26e-11 68.6
Msa0497690 AT1G53390.1 27.429 175 113 5 582 746 521 691 1.36e-11 68.9
Msa0497690 AT2G36910.1 25.967 181 118 5 573 745 1033 1205 1.70e-11 68.9
Msa0497690 AT1G28010.1 26.636 214 134 7 569 771 378 579 2.24e-11 68.6
Msa0497690 AT3G53510.1 29.193 161 104 3 594 746 136 294 2.44e-11 68.2

Find 184 sgRNAs with CRISPR-Local

Find 621 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACTTTGTAGATAGTAAA+TGG 0.216674 3_4:+31986214 None:intergenic
CACGCATCCACACTTATATT+TGG 0.234438 3_4:+31987124 None:intergenic
TTCATATAACCCACGATATA+AGG 0.236932 3_4:+31984018 None:intergenic
GATTCCTCGTTCTGTAAATT+TGG 0.239265 3_4:-31985511 Msa0497690:intron
CCAACGATCCTGCCAGCTTC+TGG 0.250083 3_4:-31988415 Msa0497690:CDS
CTAACCTCTTGGTGAATATC+TGG 0.258281 3_4:+31983713 None:intergenic
ATTGGAAGATGTATTCATTA+AGG 0.259593 3_4:-31978860 Msa0497690:CDS
CAGCAACCCCTCCATGAAAA+AGG 0.279146 3_4:+31981938 None:intergenic
TCTCTCACCGCAAATTTCTC+TGG 0.283878 3_4:+31983395 None:intergenic
GCTAAACCCCATGCAGAAAC+TGG 0.302880 3_4:+31978892 None:intergenic
TAAGATGTGCTCAGGCTTTA+CGG 0.303141 3_4:-31985819 Msa0497690:CDS
TATAGATAATTCAAATGTTA+TGG 0.314649 3_4:-31986513 Msa0497690:CDS
GTGCTCAGGCTTTACGGTTA+TGG 0.315867 3_4:-31985813 Msa0497690:CDS
CTGCATCAAGAAAGAACTTA+TGG 0.316016 3_4:-31981698 Msa0497690:CDS
TAGGAAGAACTTAACCTTCC+AGG 0.317306 3_4:-31988372 Msa0497690:intron
TGAAACGAATGTCGAGAAAT+TGG 0.321497 3_4:-31979043 Msa0497690:CDS
TGAATGTGGGGTTCAATATT+CGG 0.340040 3_4:-31987096 Msa0497690:CDS
TTGGTTCTGCATAAGGGGTT+TGG 0.350042 3_4:+31986954 None:intergenic
AGTGTTGCAATTTCATTGAT+TGG 0.350979 3_4:-31981871 Msa0497690:CDS
GTAAACAATGCTCTATATAA+AGG 0.351411 3_4:-31985772 Msa0497690:CDS
GAAAGCAGGCTCCAGAAAAT+TGG 0.354252 3_4:+31986250 None:intergenic
AGATGAAATAAAACACGAAT+TGG 0.359494 3_4:+31984521 None:intergenic
CATAAGTTCTTTCTTGATGC+AGG 0.365907 3_4:+31981699 None:intergenic
CTCAAGCAAACGCGCTTCTT+AGG 0.368147 3_4:-31988391 Msa0497690:CDS
ATTCGTGCTGTGTATATTGC+TGG 0.374386 3_4:-31987186 Msa0497690:CDS
TCTTTGCAGTTTCAACTGCT+TGG 0.374710 3_4:+31978923 None:intergenic
TTTGGCACTGGTCTATTAGC+TGG 0.377995 3_4:-31984321 Msa0497690:CDS
GATCCTTGCCTTTGGAGACT+AGG 0.379002 3_4:+31983761 None:intergenic
AGAAGGGTGGATCATTGTTA+TGG 0.382568 3_4:-31984059 Msa0497690:CDS
TTGCCTGAAGGTGAATGCTT+TGG 0.384358 3_4:-31983359 Msa0497690:CDS
TTTGGAATGCTTGGTCCTAA+TGG 0.388981 3_4:-31983341 Msa0497690:CDS
AATTTCCAGCTTACTCGTGC+TGG 0.395789 3_4:+31982997 None:intergenic
CAAACTGAGCAAAGTTTATC+CGG 0.399468 3_4:-31983432 Msa0497690:CDS
AAACTTTAGATCCTTGCCTT+TGG 0.402228 3_4:+31983753 None:intergenic
TCAGGTACTGCCTTTGTTCA+AGG 0.405606 3_4:-31983074 Msa0497690:CDS
ATTCCAAAGCATTCACCTTC+AGG 0.408324 3_4:+31983356 None:intergenic
GTCTCGGTGATGGGCCATAT+TGG 0.409881 3_4:-31984744 Msa0497690:CDS
ACCGGTACTAATCAGTCTTT+CGG 0.412543 3_4:-31986903 Msa0497690:CDS
CTATAAGAAATAATCCAATA+TGG 0.415106 3_4:+31984730 None:intergenic
ACTTTAACTTACTTGTGTTA+AGG 0.416195 3_4:+31982817 None:intergenic
CATTCCGTAGGGTTAGTAAT+AGG 0.416638 3_4:+31987050 None:intergenic
TGAGCCATTGGTTCTGCATA+AGG 0.418137 3_4:+31986947 None:intergenic
GTAAATCTTCTTAGCATTTG+AGG 0.418684 3_4:+31979008 None:intergenic
CAGCATGTAGATAACTGATA+TGG 0.419229 3_4:+31984696 None:intergenic
GAGCCATTGGTTCTGCATAA+GGG 0.420992 3_4:+31986948 None:intergenic
TCAAATGTTAAGACCGCTAC+AGG 0.421320 3_4:-31984451 Msa0497690:intron
ATATATTTAATGTCAGTATA+TGG 0.421523 3_4:-31985587 Msa0497690:CDS
GAAGTCTTCCCAGCACCATT+AGG 0.421787 3_4:+31983326 None:intergenic
ATTTCCAGCTTACTCGTGCT+GGG 0.430432 3_4:+31982998 None:intergenic
TCTCAATAATCAATTTGATA+AGG 0.430846 3_4:-31987147 Msa0497690:CDS
ACGATTGCATGATTCATAGT+AGG 0.438569 3_4:+31983461 None:intergenic
TCATAGCTGAAAGGAAGATA+TGG 0.440801 3_4:-31979105 Msa0497690:intron
CGGCTTTGATAGAATTGCAT+TGG 0.442146 3_4:-31985538 Msa0497690:CDS
TTGGTGAATATCTGGTTTCT+CGG 0.442774 3_4:+31983721 None:intergenic
GGATCAGGTGTTTGCAGTAA+AGG 0.452286 3_4:+31987023 None:intergenic
ATGCTTGGTCCTAATGGTGC+TGG 0.453298 3_4:-31983335 Msa0497690:CDS
ACAGCGCGGTATCGTGGATC+AGG 0.454481 3_4:+31987008 None:intergenic
AATCCTTTCAAGAACAAAAG+AGG 0.457308 3_4:+31983815 None:intergenic
TTATCTATATCAATGGTACT+TGG 0.458557 3_4:+31986527 None:intergenic
TAGTAATGCATACAGATGAT+AGG 0.461342 3_4:-31983113 Msa0497690:intron
AAAATGCACGGTCTCGGTGA+TGG 0.461587 3_4:-31984754 Msa0497690:CDS
ATTTGAATTATCTATATCAA+TGG 0.463245 3_4:+31986520 None:intergenic
CTATATAAAGGTTATAGAAA+AGG 0.467978 3_4:-31985760 Msa0497690:CDS
CTGTCCCTTGCTTTGCCTGA+AGG 0.469387 3_4:-31983371 Msa0497690:CDS
TATATGGATGAGCCAAGTAC+TGG 0.470368 3_4:-31981729 Msa0497690:CDS
TTTCATTGATTGGAGATCCT+AGG 0.471519 3_4:-31981861 Msa0497690:CDS
ATGGCAGTGGTTGCATATAT+AGG 0.472820 3_4:-31984348 Msa0497690:intron
CCCGGGTTTGCCTTATATCG+TGG 0.474072 3_4:-31984028 Msa0497690:CDS
TTCATTGATTGGAGATCCTA+GGG 0.479591 3_4:-31981860 Msa0497690:intron
GATCTCAATGATAGCACAAA+TGG 0.482512 3_4:-31983938 Msa0497690:CDS
CTAGTGGTCGATATCTGAAC+AGG 0.485775 3_4:+31986164 None:intergenic
ATAAGTTCTTTCTTGATGCA+GGG 0.489419 3_4:+31981700 None:intergenic
AAGAAGATTTACCATATCTC+AGG 0.490115 3_4:-31978997 Msa0497690:CDS
CTCTCACCGCAAATTTCTCT+GGG 0.490523 3_4:+31983396 None:intergenic
ATTGTTATGGAGTTATATCC+CGG 0.491503 3_4:-31984046 Msa0497690:CDS
CCGGGTTTGCCTTATATCGT+GGG 0.493382 3_4:-31984027 Msa0497690:CDS
GGGGACTCATGGTATGCGGT+GGG 0.495358 3_4:-31983963 Msa0497690:CDS
GTTTGCTTGAGTCCAGAAGC+TGG 0.497287 3_4:+31988403 None:intergenic
AGCAATATACACAGCACGAA+TGG 0.500938 3_4:+31987188 None:intergenic
TGACTTTGTAGATAGTAAAT+GGG 0.501498 3_4:+31986215 None:intergenic
CCCACGATATAAGGCAAACC+CGG 0.502468 3_4:+31984027 None:intergenic
GCTTGAGTCCAGAAGCTGGC+AGG 0.503745 3_4:+31988407 None:intergenic
TATAAACTTACAAATTTCGC+TGG 0.505784 3_4:-31984497 Msa0497690:CDS
GGTGAATGCTTTGGAATGCT+TGG 0.510603 3_4:-31983350 Msa0497690:CDS
GCAATATACACAGCACGAAT+GGG 0.512035 3_4:+31987189 None:intergenic
GACATAAGAACTGATATGAA+TGG 0.512500 3_4:-31983047 Msa0497690:CDS
GGTCTTGATTATCATGTTCG+TGG 0.512856 3_4:-31983906 Msa0497690:CDS
AAATGCACGGTCTCGGTGAT+GGG 0.514995 3_4:-31984753 Msa0497690:CDS
AATTATGACAAAGTATGAAA+TGG 0.515851 3_4:+31978820 None:intergenic
TGCTTGGTCCTAATGGTGCT+GGG 0.519360 3_4:-31983334 Msa0497690:CDS
ACGATACCGCGCTGTTAGAA+CGG 0.520329 3_4:-31987000 Msa0497690:CDS
TATAGAGTTAAGATGTGCTC+AGG 0.521272 3_4:-31985827 Msa0497690:intron
TTCTCTTTACAGTCTTGTCA+AGG 0.524663 3_4:-31986559 Msa0497690:intron
ATGATGAAAATGCACGGTCT+CGG 0.526487 3_4:-31984760 Msa0497690:CDS
GAAATGTGAAGACAAACATA+AGG 0.527145 3_4:-31987223 Msa0497690:CDS
AAACTTCCCAGTTTCTGCAT+GGG 0.527566 3_4:-31978899 Msa0497690:CDS
TAAGTCTGCCATAAAAGAGT+AGG 0.528252 3_4:+31982858 None:intergenic
TTGCTGTGGGAAATCTTGAC+AGG 0.530421 3_4:-31982890 Msa0497690:CDS
GAATGGAATATATACTAGCA+TGG 0.537122 3_4:-31983030 Msa0497690:CDS
CCAGAAGCTGGCAGGATCGT+TGG 0.541881 3_4:+31988415 None:intergenic
GGGTTTGGAAAATCAGAAAA+CGG 0.542161 3_4:+31986969 None:intergenic
TATCTATATCAATGGTACTT+GGG 0.542816 3_4:+31986528 None:intergenic
CAATGCAATTCTATCAAAGC+CGG 0.547605 3_4:+31985539 None:intergenic
GTACAATTTCTTCAGAAGGG+TGG 0.547606 3_4:-31984072 Msa0497690:intron
CTTACCTTGCTGCACGCTAG+TGG 0.548147 3_4:+31986148 None:intergenic
AACTTCCCAGTTTCTGCATG+GGG 0.551152 3_4:-31978898 Msa0497690:CDS
ACTAATCAGTCTTTCGGAGA+AGG 0.553862 3_4:-31986897 Msa0497690:intron
CTAAACCCCATGCAGAAACT+GGG 0.554155 3_4:+31978893 None:intergenic
CAGATCAATGAGATAACTGC+AGG 0.555105 3_4:-31985724 Msa0497690:intron
GCAGGGTCTAATCCAGTACT+TGG 0.555273 3_4:+31981717 None:intergenic
TTTCCAGCTTACTCGTGCTG+GGG 0.557363 3_4:+31982999 None:intergenic
AGCCATTGGTTCTGCATAAG+GGG 0.558267 3_4:+31986949 None:intergenic
TAATAGGACAAGCACCAACT+TGG 0.558854 3_4:+31987066 None:intergenic
TTCCAGCTTACTCGTGCTGG+GGG 0.559084 3_4:+31983000 None:intergenic
GAAACTTCCCAGTTTCTGCA+TGG 0.559187 3_4:-31978900 Msa0497690:CDS
GGAGATACTATGGGGACTCA+TGG 0.559932 3_4:-31983974 Msa0497690:CDS
AGGAACTTATGTATTCTCAA+TGG 0.560789 3_4:-31979082 Msa0497690:CDS
GTTCTAACAGCGCGGTATCG+TGG 0.562327 3_4:+31987002 None:intergenic
GGAAGCTCTGAAAAGAAAGC+AGG 0.562519 3_4:+31986236 None:intergenic
AATGGAATATATACTAGCAT+GGG 0.563717 3_4:-31983029 Msa0497690:CDS
ATTCACCTTCAGGCAAAGCA+AGG 0.564119 3_4:+31983366 None:intergenic
AAAGTTTATCCGGGGAGGGA+TGG 0.564223 3_4:-31983422 Msa0497690:CDS
TCCGAAAGACTGATTAGTAC+CGG 0.564755 3_4:+31986902 None:intergenic
AAACTGAGCAAAGTTTATCC+GGG 0.565876 3_4:-31983431 Msa0497690:CDS
TCTGGGTTACCATCCCTCCC+CGG 0.566376 3_4:+31983413 None:intergenic
TGATTATCATGTTCGTGGAG+TGG 0.567891 3_4:-31983901 Msa0497690:CDS
ATTTACACTTTAGACGGAGA+AGG 0.570050 3_4:-31983504 Msa0497690:intron
GGATGCGTGGAGAATGAATG+TGG 0.571136 3_4:-31987110 Msa0497690:CDS
AGTGAGGGGACATGAGCCAT+TGG 0.572183 3_4:+31986935 None:intergenic
GGTCTTACAAAGCCAACCTC+AGG 0.574768 3_4:-31983092 Msa0497690:CDS
AGTAAAGGAGGCCATTCCGT+AGG 0.575779 3_4:+31987038 None:intergenic
TTCGGAAGCCTAGTCTCCAA+AGG 0.580952 3_4:-31983769 Msa0497690:CDS
ACAAAGGCAGTACCTGAGGT+TGG 0.581547 3_4:+31983080 None:intergenic
ACCGGTGAAGAGCATAGTGA+GGG 0.582022 3_4:+31986920 None:intergenic
ATCTATCATCAAACCTGTAG+CGG 0.582101 3_4:+31984438 None:intergenic
GATGCGTGGAGAATGAATGT+GGG 0.586089 3_4:-31987109 Msa0497690:CDS
ATTCATTAAGGTTGCACGTG+AGG 0.586150 3_4:-31978848 Msa0497690:CDS
TGGGGACTCATGGTATGCGG+TGG 0.586806 3_4:-31983964 Msa0497690:CDS
GTTGTATGATCATAGCTGAA+AGG 0.587131 3_4:-31979114 Msa0497690:intron
TACACTTTAGACGGAGAAGG+TGG 0.587151 3_4:-31983501 Msa0497690:intron
TATGTCAAGACCTTGAACAA+AGG 0.587440 3_4:+31983064 None:intergenic
TTGTCCTATTACTAACCCTA+CGG 0.587799 3_4:-31987054 Msa0497690:CDS
GAGAGAGATAGTAACCTGGA+AGG 0.588246 3_4:+31988358 None:intergenic
ATAGTGGAGGAATGAAGAGG+AGG 0.594450 3_4:-31981897 Msa0497690:CDS
TTAACTTACTTGTGTTAAGG+CGG 0.594619 3_4:+31982820 None:intergenic
GAGCAAAGTTTATCCGGGGA+GGG 0.599491 3_4:-31983426 Msa0497690:CDS
TAGCACAAATGGCATGAAAG+AGG 0.600475 3_4:-31983927 Msa0497690:CDS
GTTTGAGCTACCAAAAGATG+AGG 0.603053 3_4:-31978965 Msa0497690:CDS
AATATAGTGGAGGAATGAAG+AGG 0.604137 3_4:-31981900 Msa0497690:CDS
ATGGCGTAATAGTTCTTCTG+AGG 0.606487 3_4:-31985794 Msa0497690:CDS
TTGATAGAATTGCATTGGCG+CGG 0.607143 3_4:-31985533 Msa0497690:CDS
CCCCTCACTATGCTCTTCAC+CGG 0.607187 3_4:-31986921 Msa0497690:CDS
TTGTTATGGAGTTATATCCC+GGG 0.607715 3_4:-31984045 Msa0497690:CDS
AACCCCTTATGCAGAACCAA+TGG 0.608250 3_4:-31986951 Msa0497690:CDS
CAAATATAAGTGTGGATGCG+TGG 0.611641 3_4:-31987123 Msa0497690:CDS
TGGTAACCCAGAGAAATTTG+CGG 0.614995 3_4:-31983402 Msa0497690:CDS
GTAAAGGAGGCCATTCCGTA+GGG 0.617629 3_4:+31987039 None:intergenic
TTCACCTTCAGGCAAAGCAA+GGG 0.622296 3_4:+31983367 None:intergenic
AAGCCTAGTCTCCAAAGGCA+AGG 0.624139 3_4:-31983764 Msa0497690:CDS
TCAGGTGTTTGCAGTAAAGG+AGG 0.631644 3_4:+31987026 None:intergenic
TAGCTGAAAGGAAGATATGG+AGG 0.632182 3_4:-31979102 Msa0497690:CDS
TGAGCAAAGTTTATCCGGGG+AGG 0.632744 3_4:-31983427 Msa0497690:CDS
GATAAATAGTAAATACACAC+TGG 0.636924 3_4:+31978735 None:intergenic
CTATTACTAACCCTACGGAA+TGG 0.640962 3_4:-31987049 Msa0497690:CDS
AGAATCATGATGAAAATGCA+CGG 0.641632 3_4:-31984766 Msa0497690:CDS
AAAGCTGGAAAATATAGTGG+AGG 0.644848 3_4:-31981910 Msa0497690:CDS
GGGTTTAGCTGACACCACAT+TGG 0.644890 3_4:-31978878 Msa0497690:CDS
TCTCATAAACTAATGATGTG+AGG 0.649010 3_4:+31984803 None:intergenic
GATAAGGCCAAATATAAGTG+TGG 0.649677 3_4:-31987131 Msa0497690:CDS
GGGACTCATGGTATGCGGTG+GGG 0.650874 3_4:-31983962 Msa0497690:CDS
TACCGGTGAAGAGCATAGTG+AGG 0.652067 3_4:+31986919 None:intergenic
TTGAACAAAGGCAGTACCTG+AGG 0.655017 3_4:+31983076 None:intergenic
GAAACCAGATATTCACCAAG+AGG 0.655964 3_4:-31983717 Msa0497690:intron
GGTCGATATCTGAACAGGAA+CGG 0.660875 3_4:+31986169 None:intergenic
AACTGAGCAAAGTTTATCCG+GGG 0.666028 3_4:-31983430 Msa0497690:CDS
CCACGATATAAGGCAAACCC+GGG 0.667655 3_4:+31984028 None:intergenic
AATGAATACATCTTCCAATG+TGG 0.675921 3_4:+31978864 None:intergenic
CTATGGGGACTCATGGTATG+CGG 0.676111 3_4:-31983967 Msa0497690:CDS
TCGACCACTAGCGTGCAGCA+AGG 0.686028 3_4:-31986152 Msa0497690:intron
TATACCAAATTTACAGAACG+AGG 0.687523 3_4:+31985507 None:intergenic
ATGCGTGGAGAATGAATGTG+GGG 0.734476 3_4:-31987108 Msa0497690:CDS
CTTAACATTTGAAAACAGCG+AGG 0.746454 3_4:+31984462 None:intergenic
CCGGTGAAGAGCATAGTGAG+GGG 0.752191 3_4:+31986921 None:intergenic
GAAAATCCGTTCTAACAGCG+CGG 0.754339 3_4:+31986994 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACATATCTAAAATTTAT+TGG - chr3_4:31979111-31979130 Msa0497690:intron 10.0%
!!! TAAATTTAAATTGCATATTT+TGG + chr3_4:31984764-31984783 None:intergenic 10.0%
!!! TTGACTAATATTTTTTTTTT+TGG - chr3_4:31985849-31985868 Msa0497690:intron 10.0%
!!! AATATTTTTTTTTTTGGAAA+AGG - chr3_4:31985855-31985874 Msa0497690:intron 10.0%
!! ATTTGAATTATCTATATCAA+TGG + chr3_4:31980596-31980615 None:intergenic 15.0%
!! TATAGATAATTCAAATGTTA+TGG - chr3_4:31980600-31980619 Msa0497690:intron 15.0%
!! ATATATTTAATGTCAGTATA+TGG - chr3_4:31981526-31981545 Msa0497690:intron 15.0%
!! TTGTTCTATTAAATATGTTA+GGG - chr3_4:31981677-31981696 Msa0497690:intron 15.0%
!!! TTTTTCTTCTATTTTTGTAA+TGG - chr3_4:31982746-31982765 Msa0497690:intron 15.0%
!! ATGTATCTTGAATAAAAAAT+TGG + chr3_4:31982827-31982846 None:intergenic 15.0%
!!! TGAATTTACTTTTTCTTATT+TGG + chr3_4:31985629-31985648 None:intergenic 15.0%
!!! ATCATGATTATTTTTCTATT+CGG - chr3_4:31987519-31987538 Msa0497690:intron 15.0%
!! GATATTTGTAAAGATAAGTT+AGG - chr3_4:31979070-31979089 Msa0497690:CDS 20.0%
!! AGATATGTAAATGTAAACTT+TGG + chr3_4:31979102-31979121 None:intergenic 20.0%
!! TCTCAATAATCAATTTGATA+AGG - chr3_4:31979966-31979985 Msa0497690:intron 20.0%
!! CACAAGAAGAAATTAAATTA+GGG + chr3_4:31980728-31980747 None:intergenic 20.0%
!! ACACAAGAAGAAATTAAATT+AGG + chr3_4:31980729-31980748 None:intergenic 20.0%
!! CTATATAAAGGTTATAGAAA+AGG - chr3_4:31981353-31981372 Msa0497690:intron 20.0%
!! GTTGTTCTATTAAATATGTT+AGG - chr3_4:31981676-31981695 Msa0497690:intron 20.0%
!! AAGTAAGTTTACATACAATT+AGG + chr3_4:31981764-31981783 None:intergenic 20.0%
!! CTATAAGAAATAATCCAATA+TGG + chr3_4:31982386-31982405 None:intergenic 20.0%
!!! ATTTAGATTTAGGTTTCTAT+CGG + chr3_4:31983547-31983566 None:intergenic 20.0%
!! TTTCTATTCCATTTAGATTT+AGG + chr3_4:31983557-31983576 None:intergenic 20.0%
!!! GTATATAATTTTTTTCCGTT+TGG - chr3_4:31984191-31984210 Msa0497690:intron 20.0%
!!! ATAGATAAGATGTTCTTTTA+TGG - chr3_4:31984855-31984874 Msa0497690:intron 20.0%
!!! TAGATAAGATGTTCTTTTAT+GGG - chr3_4:31984856-31984875 Msa0497690:intron 20.0%
!!! AGTATCTTTAAGGTAATTTT+GGG + chr3_4:31984921-31984940 None:intergenic 20.0%
!!! TAGTATCTTTAAGGTAATTT+TGG + chr3_4:31984922-31984941 None:intergenic 20.0%
!! AAAAAAAAAAAACATACCCT+AGG + chr3_4:31985272-31985291 None:intergenic 20.0%
!!! ATGTTTTCTAATTCTGTTAT+TGG - chr3_4:31985342-31985361 Msa0497690:intron 20.0%
!!! TGTTATTGGTAATTTTGTTA+AGG - chr3_4:31985356-31985375 Msa0497690:intron 20.0%
!!! TTTTGTTAAGGTTGTTTATA+TGG - chr3_4:31985368-31985387 Msa0497690:intron 20.0%
!!! ATGTTTCTGTTTAAATCTTT+AGG + chr3_4:31985817-31985836 None:intergenic 20.0%
!! AAAATGTAATAGGAGTAAAA+TGG + chr3_4:31986480-31986499 None:intergenic 20.0%
!!! AATGTAATTTATACCTCTTT+TGG + chr3_4:31986851-31986870 None:intergenic 20.0%
!! GATTAAATTCTTGTTAAAGA+CGG - chr3_4:31986888-31986907 Msa0497690:intron 20.0%
!! TCACATAATATCAAGATATT+AGG + chr3_4:31987002-31987021 None:intergenic 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG - chr3_4:31987806-31987825 Msa0497690:intron 20.0%
!! AATTATGACAAAGTATGAAA+TGG + chr3_4:31988296-31988315 None:intergenic 20.0%
! GAAAAACATAGAAAGTAACA+AGG - chr3_4:31978655-31978674 Msa0497690:three_prime_UTR 25.0%
! ATTTGAGTAAACAATGATGT+TGG - chr3_4:31979007-31979026 Msa0497690:CDS 25.0%
! TCAGTATGAAAGAATATGTT+AGG - chr3_4:31979628-31979647 Msa0497690:intron 25.0%
! TCAGTATGAAAGAATATGTT+AGG - chr3_4:31979628-31979647 Msa0497690:intron 25.0%
!! CATATACTTTTATGTGACAA+AGG + chr3_4:31980281-31980300 None:intergenic 25.0%
! AGAGATAGAATGATATTTGA+AGG - chr3_4:31980397-31980416 Msa0497690:intron 25.0%
!! ATGATTTTCTGTATAACTGA+TGG - chr3_4:31980481-31980500 Msa0497690:intron 25.0%
! TATCTATATCAATGGTACTT+GGG + chr3_4:31980588-31980607 None:intergenic 25.0%
! TTATCTATATCAATGGTACT+TGG + chr3_4:31980589-31980608 None:intergenic 25.0%
! GCAACCATTATAATGTTATA+GGG - chr3_4:31980817-31980836 Msa0497690:intron 25.0%
! TGACTTTGTAGATAGTAAAT+GGG + chr3_4:31980901-31980920 None:intergenic 25.0%
! CTTGTAAGATATATGATAAC+AGG - chr3_4:31981016-31981035 Msa0497690:intron 25.0%
! ATATTGTCATGTTTCTTTCT+AGG - chr3_4:31981194-31981213 Msa0497690:intron 25.0%
! AACTAGAATTAGTACAAACT+TGG + chr3_4:31981249-31981268 None:intergenic 25.0%
! GTAAACAATGCTCTATATAA+AGG - chr3_4:31981341-31981360 Msa0497690:intron 25.0%
!!! TATTTCCATATTGTTTTGAC+AGG - chr3_4:31981477-31981496 Msa0497690:intron 25.0%
! TTCTATTAAATATGTTAGGG+AGG - chr3_4:31981680-31981699 Msa0497690:intron 25.0%
! TCTATTAAATATGTTAGGGA+GGG - chr3_4:31981681-31981700 Msa0497690:intron 25.0%
! TGGGAAAATACACATTTAAA+TGG + chr3_4:31981819-31981838 None:intergenic 25.0%
!! TCACGTAATATCTTTTTATG+TGG - chr3_4:31982211-31982230 Msa0497690:intron 25.0%
! TAACCATGTAAATCTTGTTA+CGG - chr3_4:31982236-31982255 Msa0497690:intron 25.0%
! AGATGAAATAAAACACGAAT+TGG + chr3_4:31982595-31982614 None:intergenic 25.0%
! TATAAACTTACAAATTTCGC+TGG - chr3_4:31982616-31982635 Msa0497690:intron 25.0%
!! TCTCAATTATTTGACTTACT+TGG + chr3_4:31982855-31982874 None:intergenic 25.0%
! CAATCAAAAAACCAAAAGAA+AGG + chr3_4:31983018-31983037 None:intergenic 25.0%
! AAAGGATTTCAGAAAAAACT+TGG - chr3_4:31983313-31983332 Msa0497690:CDS 25.0%
!! AAAAACTTGGTTCATCTTTT+CGG - chr3_4:31983326-31983345 Msa0497690:CDS 25.0%
! GATAGAAACCTAAATCTAAA+TGG - chr3_4:31983546-31983565 Msa0497690:intron 25.0%
! AATGGAATATATACTAGCAT+GGG - chr3_4:31984084-31984103 Msa0497690:intron 25.0%
!! ACTTTAACTTACTTGTGTTA+AGG + chr3_4:31984299-31984318 None:intergenic 25.0%
! AACACAAGTAAGTTAAAGTT+TGG - chr3_4:31984300-31984319 Msa0497690:CDS 25.0%
! TACCTTAAAGATACTAGTAT+AGG - chr3_4:31984926-31984945 Msa0497690:intron 25.0%
! TACTAGTATAGGCATATAAT+AGG - chr3_4:31984937-31984956 Msa0497690:intron 25.0%
!!! AAAAGTGTAAACCTTTTTCA+TGG - chr3_4:31985164-31985183 Msa0497690:intron 25.0%
! AAAAAAGCTGGAAAATATAG+TGG - chr3_4:31985200-31985219 Msa0497690:intron 25.0%
! TAATGTTTCAAAAACCATGA+GGG + chr3_4:31985500-31985519 None:intergenic 25.0%
! TCATAAATTATTGCACAACT+TGG + chr3_4:31985523-31985542 None:intergenic 25.0%
! TTGTGCAATAATTTATGAGA+AGG - chr3_4:31985525-31985544 Msa0497690:CDS 25.0%
! TGTGCAATAATTTATGAGAA+GGG - chr3_4:31985526-31985545 Msa0497690:CDS 25.0%
!!! AACAAATTATGGCTATTTTG+AGG + chr3_4:31985742-31985761 None:intergenic 25.0%
!! CTGTTTAAATCTTTAGGAAA+AGG + chr3_4:31985811-31985830 None:intergenic 25.0%
!!! TTCTCATCAATTTTGTTTGT+AGG - chr3_4:31985920-31985939 Msa0497690:intron 25.0%
! TTAGAGAAATGATATCGATA+AGG + chr3_4:31986045-31986064 None:intergenic 25.0%
! GTTAAATCAACTTTCTTGAA+TGG + chr3_4:31986274-31986293 None:intergenic 25.0%
! GATTTACAGAAAATAGAATC+CGG + chr3_4:31986458-31986477 None:intergenic 25.0%
!! AACCAAAGTTGTATATTTTG+AGG - chr3_4:31986622-31986641 Msa0497690:intron 25.0%
! TACCTCAAAATATACAACTT+TGG + chr3_4:31986627-31986646 None:intergenic 25.0%
! TAACAAAGCAGATATATCTA+AGG + chr3_4:31986667-31986686 None:intergenic 25.0%
!! TATCTGCTTTGTTAGTTATT+TGG - chr3_4:31986673-31986692 Msa0497690:intron 25.0%
! ATATTTCATATATTCCAGCA+AGG + chr3_4:31986977-31986996 None:intergenic 25.0%
!! AGATTGAATATACATCGATT+TGG - chr3_4:31987454-31987473 Msa0497690:intron 25.0%
!!! GATTATTTTTCTATTCGGTT+AGG - chr3_4:31987524-31987543 Msa0497690:intron 25.0%
! AATGAAAGTAGAAAACTAAG+AGG + chr3_4:31987932-31987951 None:intergenic 25.0%
!!! GATATTTTAACCTCATCTTT+TGG + chr3_4:31988161-31988180 None:intergenic 25.0%
! ATTGGAAGATGTATTCATTA+AGG - chr3_4:31988253-31988272 Msa0497690:intron 25.0%
! GATAAATAGTAAATACACAC+TGG + chr3_4:31988381-31988400 None:intergenic 25.0%
ATCTTAGATCTTAGAAATGG+TGG + chr3_4:31979269-31979288 None:intergenic 30.0%
!! ACCATTTCTAAGATCTAAGA+TGG - chr3_4:31979268-31979287 Msa0497690:intron 30.0%
ACCATCTTAGATCTTAGAAA+TGG + chr3_4:31979272-31979291 None:intergenic 30.0%
GAAATGTGAAGACAAACATA+AGG - chr3_4:31979890-31979909 Msa0497690:intron 30.0%
GACGTAGTTTCATATATTTC+AGG + chr3_4:31980306-31980325 None:intergenic 30.0%
AAGACTGTAAAGAGAAAAAC+AGG + chr3_4:31980550-31980569 None:intergenic 30.0%
TCTTCTTGTGTGTAACAATA+TGG - chr3_4:31980738-31980757 Msa0497690:intron 30.0%
GTATTCTTTCTTTGTGAACA+CGG - chr3_4:31980786-31980805 Msa0497690:intron 30.0%
GGCAACCATTATAATGTTAT+AGG - chr3_4:31980816-31980835 Msa0497690:intron 30.0%
CGATCCCTATAACATTATAA+TGG + chr3_4:31980824-31980843 None:intergenic 30.0%
CTGACTTTGTAGATAGTAAA+TGG + chr3_4:31980902-31980921 None:intergenic 30.0%
GGAAATCAATAATATGTGCA+AGG - chr3_4:31981037-31981056 Msa0497690:intron 30.0%
AATGAATACATTGTCCATTG+CGG + chr3_4:31981129-31981148 None:intergenic 30.0%
!! TCTAGTTTATTGTTTTCCAC+TGG - chr3_4:31981262-31981281 Msa0497690:intron 30.0%
! TATTTTACGTAATACGTCGA+AGG - chr3_4:31981447-31981466 Msa0497690:intron 30.0%
! ATTTTACGTAATACGTCGAA+GGG - chr3_4:31981448-31981467 Msa0497690:intron 30.0%
CATAACCTGTCAAAACAATA+TGG + chr3_4:31981485-31981504 None:intergenic 30.0%
TCAACCTATAAAAATGACAC+CGG - chr3_4:31981555-31981574 Msa0497690:intron 30.0%
TATACCAAATTTACAGAACG+AGG + chr3_4:31981609-31981628 None:intergenic 30.0%
TTTGGTATACACTCAAACTT+TGG - chr3_4:31981620-31981639 Msa0497690:intron 30.0%
TGCATCATAAATAACCTATC+AGG + chr3_4:31981881-31981900 None:intergenic 30.0%
ATATTACGTGAAGAATTGAG+AGG + chr3_4:31982202-31982221 None:intergenic 30.0%
AACCATGTAAATCTTGTTAC+GGG - chr3_4:31982237-31982256 Msa0497690:intron 30.0%
TCATGCTTATATGTTGATGT+AGG - chr3_4:31982283-31982302 Msa0497690:intron 30.0%
TCTCATAAACTAATGATGTG+AGG + chr3_4:31982313-31982332 None:intergenic 30.0%
AGAATCATGATGAAAATGCA+CGG - chr3_4:31982347-31982366 Msa0497690:intron 30.0%
! ATGCTGTGTTTTGTGATTTT+TGG - chr3_4:31982434-31982453 Msa0497690:intron 30.0%
! TCTTGCTTTACGTTTCTTTT+TGG - chr3_4:31982494-31982513 Msa0497690:intron 30.0%
! AATTTCGCTGGCATTTTTAT+TGG - chr3_4:31982628-31982647 Msa0497690:intron 30.0%
!!! TTCTATTTTTGTAATGGCAG+TGG - chr3_4:31982752-31982771 Msa0497690:intron 30.0%
! GTTGCATATATAGGTGTTTT+TGG - chr3_4:31982774-31982793 Msa0497690:intron 30.0%
TTTGATATCGACAAAACCTT+TGG + chr3_4:31982895-31982914 None:intergenic 30.0%
TGTTAACACATGACACAAAT+AGG + chr3_4:31982985-31983004 None:intergenic 30.0%
CTTGTACAATTTCTTCAGAA+GGG - chr3_4:31983038-31983057 Msa0497690:CDS 30.0%
ATTGTTATGGAGTTATATCC+CGG - chr3_4:31983067-31983086 Msa0497690:CDS 30.0%
TTCATATAACCCACGATATA+AGG + chr3_4:31983098-31983117 None:intergenic 30.0%
! TTTTCACAATCGTCTTTTAC+TGG - chr3_4:31983118-31983137 Msa0497690:intron 30.0%
! TCTTTTACTGGAGATACTAT+GGG - chr3_4:31983130-31983149 Msa0497690:intron 30.0%
!! ATCGATCAAGTTTTATCAAC+AGG - chr3_4:31983262-31983281 Msa0497690:intron 30.0%
!! AAGTTTTATCAACAGGAAGT+TGG - chr3_4:31983269-31983288 Msa0497690:intron 30.0%
! AATCCTCTTTTGTTCTTGAA+AGG - chr3_4:31983295-31983314 Msa0497690:intron 30.0%
AATCCTTTCAAGAACAAAAG+AGG + chr3_4:31983301-31983320 None:intergenic 30.0%
GTCATCATTTACACTTTAGA+CGG - chr3_4:31983603-31983622 Msa0497690:intron 30.0%
! GAAGACTTCTTTTATCAACA+TGG - chr3_4:31983801-31983820 Msa0497690:CDS 30.0%
! ACTTCTTTTATCAACATGGT+TGG - chr3_4:31983805-31983824 Msa0497690:CDS 30.0%
ACGGTATGATTAATGAATCA+AGG + chr3_4:31983979-31983998 None:intergenic 30.0%
TAGTAATGCATACAGATGAT+AGG - chr3_4:31984000-31984019 Msa0497690:CDS 30.0%
GACATAAGAACTGATATGAA+TGG - chr3_4:31984066-31984085 Msa0497690:intron 30.0%
GAATGGAATATATACTAGCA+TGG - chr3_4:31984083-31984102 Msa0497690:intron 30.0%
GGCAGACTTAAAAATCTTAA+AGG - chr3_4:31984268-31984287 Msa0497690:intron 30.0%
TTAACTTACTTGTGTTAAGG+CGG + chr3_4:31984296-31984315 None:intergenic 30.0%
AAGTTTGGAAAATCTTTAGC+AGG - chr3_4:31984315-31984334 Msa0497690:CDS 30.0%
AGTTTGGAAAATCTTTAGCA+GGG - chr3_4:31984316-31984335 Msa0497690:CDS 30.0%
GACGACTAGAAAATTAGATT+GGG - chr3_4:31984338-31984357 Msa0497690:CDS 30.0%
TGCCTATACTAGTATCTTTA+AGG + chr3_4:31984931-31984950 None:intergenic 30.0%
AGTGTTGCAATTTCATTGAT+TGG - chr3_4:31985242-31985261 Msa0497690:intron 30.0%
ATAAGTTCTTTCTTGATGCA+GGG + chr3_4:31985416-31985435 None:intergenic 30.0%
GTAATGTTTCAAAAACCATG+AGG + chr3_4:31985501-31985520 None:intergenic 30.0%
GTAGTAAATGAGTATGAGAT+AGG - chr3_4:31985697-31985716 Msa0497690:intron 30.0%
GTTCGATGGTTATATAACAA+GGG + chr3_4:31985789-31985808 None:intergenic 30.0%
TCTTACTTAAGACCAAAAAG+AGG + chr3_4:31986008-31986027 None:intergenic 30.0%
AATGATATCGATAAGGCTAT+AGG + chr3_4:31986038-31986057 None:intergenic 30.0%
GTAACACACAAGAAGAAAAT+GGG + chr3_4:31986094-31986113 None:intergenic 30.0%
TGTAACACACAAGAAGAAAA+TGG + chr3_4:31986095-31986114 None:intergenic 30.0%
! TTACATTTTTCCTTTGAGTC+AGG - chr3_4:31986110-31986129 Msa0497690:intron 30.0%
CATGAAACAAACTCATCAAT+TGG + chr3_4:31986339-31986358 None:intergenic 30.0%
TATTCTTCAATAGCTAGAGT+TGG + chr3_4:31986393-31986412 None:intergenic 30.0%
! TCCTATTACATTTTTGTCTC+TGG - chr3_4:31986486-31986505 Msa0497690:intron 30.0%
TCCAGAGACAAAAATGTAAT+AGG + chr3_4:31986490-31986509 None:intergenic 30.0%
GATCAATAAAAGTGGTACAT+GGG + chr3_4:31986527-31986546 None:intergenic 30.0%
TGATCAATAAAAGTGGTACA+TGG + chr3_4:31986528-31986547 None:intergenic 30.0%
TTGGCAATGATCAATAAAAG+TGG + chr3_4:31986535-31986554 None:intergenic 30.0%
AGAATAGAATGATGCAAAGA+AGG + chr3_4:31986563-31986582 None:intergenic 30.0%
TTTCATGAAAAATGCAACTG+AGG + chr3_4:31986599-31986618 None:intergenic 30.0%
ATATTCCTAATCGATCACAT+AGG + chr3_4:31986796-31986815 None:intergenic 30.0%
CGATTAGGAATATTTGTAGA+CGG - chr3_4:31986803-31986822 Msa0497690:intron 30.0%
! TTGTTAAAGACGGATTCTAT+AGG - chr3_4:31986898-31986917 Msa0497690:CDS 30.0%
! TGTTAAAGACGGATTCTATA+GGG - chr3_4:31986899-31986918 Msa0497690:CDS 30.0%
GTATAATCTATGGGATTACA+GGG + chr3_4:31986953-31986972 None:intergenic 30.0%
TGTATAATCTATGGGATTAC+AGG + chr3_4:31986954-31986973 None:intergenic 30.0%
ATCTATGTAGTGTATACTAG+AGG + chr3_4:31987438-31987457 None:intergenic 30.0%
AATGTGAAAACTACTCGATT+CGG + chr3_4:31987486-31987505 None:intergenic 30.0%
TTTCGATACACAGTTGAATT+AGG - chr3_4:31987594-31987613 Msa0497690:intron 30.0%
TTTCGATACACAGTTGAATT+AGG - chr3_4:31987594-31987613 Msa0497690:intron 30.0%
CTTATACACAAGCTCTTATA+TGG + chr3_4:31987696-31987715 None:intergenic 30.0%
!! TAAGATCTCTAGGATAACTT+AGG + chr3_4:31987782-31987801 None:intergenic 30.0%
AAGTTATCCTAGAGATCTTA+TGG - chr3_4:31987782-31987801 Msa0497690:intron 30.0%
CTTATTTCCATAAGATCTCT+AGG + chr3_4:31987792-31987811 None:intergenic 30.0%
AGGAACTTATGTATTCTCAA+TGG - chr3_4:31988031-31988050 Msa0497690:intron 30.0%
GTAAATCTTCTTAGCATTTG+AGG + chr3_4:31988108-31988127 None:intergenic 30.0%
AAGAAGATTTACCATATCTC+AGG - chr3_4:31988116-31988135 Msa0497690:intron 30.0%
AATGAATACATCTTCCAATG+TGG + chr3_4:31988252-31988271 None:intergenic 30.0%
AAGTTCGCAAGAGAACATTT+AGG - chr3_4:31978926-31978945 Msa0497690:CDS 35.0%
AGTTCGCAAGAGAACATTTA+GGG - chr3_4:31978927-31978946 Msa0497690:CDS 35.0%
CTTTGATCATTGAATGTGTG+AGG + chr3_4:31978968-31978987 None:intergenic 35.0%
CACACATTCAATGATCAAAG+TGG - chr3_4:31978968-31978987 Msa0497690:CDS 35.0%
TATGTTAAAGAGTCCCACAT+CGG - chr3_4:31979159-31979178 Msa0497690:intron 35.0%
CTGGCAATGTGTTTATAAGT+GGG - chr3_4:31979194-31979213 Msa0497690:intron 35.0%
AGATCTTAGAAATGGTGGTT+GGG + chr3_4:31979264-31979283 None:intergenic 35.0%
TAGATCTTAGAAATGGTGGT+TGG + chr3_4:31979265-31979284 None:intergenic 35.0%
! TGCTATCAGGTTTTCGTTAT+CGG - chr3_4:31979325-31979344 Msa0497690:intron 35.0%
TGTGTTAAAGAGTCACACAT+CGG - chr3_4:31979402-31979421 Msa0497690:intron 35.0%
! TGCTATCAGGTTTTCGTTAT+CGG - chr3_4:31979325-31979344 Msa0497690:intron 35.0%
TGTGTTAAAGAGTCACACAT+CGG - chr3_4:31979402-31979421 Msa0497690:intron 35.0%
ATGCAGCACACTTCATATTA+TGG + chr3_4:31979813-31979832 None:intergenic 35.0%
GATAAGGCCAAATATAAGTG+TGG - chr3_4:31979982-31980001 Msa0497690:intron 35.0%
TGAATGTGGGGTTCAATATT+CGG - chr3_4:31980017-31980036 Msa0497690:intron 35.0%
!! TATTCGGATTTTGACCAAGT+TGG - chr3_4:31980033-31980052 Msa0497690:intron 35.0%
TTGTCCTATTACTAACCCTA+CGG - chr3_4:31980059-31980078 Msa0497690:intron 35.0%
GGGTTTGGAAAATCAGAAAA+CGG + chr3_4:31980147-31980166 None:intergenic 35.0%
GTCTTATGAACATGACTATC+AGG + chr3_4:31980328-31980347 None:intergenic 35.0%
GACGCAGGTTTAATAAAATG+TGG - chr3_4:31980345-31980364 Msa0497690:intron 35.0%
! TTCTCTTTACAGTCTTGTCA+AGG - chr3_4:31980554-31980573 Msa0497690:intron 35.0%
TATGTGCAAGGATTTACTCA+TGG - chr3_4:31981049-31981068 Msa0497690:intron 35.0%
!!! TTTTGACGTCGATTCTAATC+TGG - chr3_4:31981085-31981104 Msa0497690:intron 35.0%
TGTCATGTTTCTTTCTAGGT+AGG - chr3_4:31981198-31981217 Msa0497690:intron 35.0%
CATCTTAACTCTATATCCAG+TGG + chr3_4:31981281-31981300 None:intergenic 35.0%
TATAGAGTTAAGATGTGCTC+AGG - chr3_4:31981286-31981305 Msa0497690:intron 35.0%
!!! AAAGCCGGTGTCATTTTTAT+AGG + chr3_4:31981562-31981581 None:intergenic 35.0%
CAATGCAATTCTATCAAAGC+CGG + chr3_4:31981577-31981596 None:intergenic 35.0%
GATTCCTCGTTCTGTAAATT+TGG - chr3_4:31981602-31981621 Msa0497690:intron 35.0%
ATTAAATATGTTAGGGAGGG+AGG - chr3_4:31981684-31981703 Msa0497690:intron 35.0%
TTAAATATGTTAGGGAGGGA+GGG - chr3_4:31981685-31981704 Msa0497690:intron 35.0%
! TAAGATTTTGTGCACCTGAT+AGG - chr3_4:31981864-31981883 Msa0497690:CDS 35.0%
GCTCTTATCATAATCGAAAC+TGG + chr3_4:31981921-31981940 None:intergenic 35.0%
TCTAGTATCTATATGCTTGC+AGG - chr3_4:31981946-31981965 Msa0497690:CDS 35.0%
! CACAAACTCGAACAACATTT+TGG + chr3_4:31982011-31982030 None:intergenic 35.0%
! AATGTTGTTCGAGTTTGTGA+AGG - chr3_4:31982012-31982031 Msa0497690:intron 35.0%
AAGCCACGTCAAACTTTAAT+GGG + chr3_4:31982057-31982076 None:intergenic 35.0%
TCGCATATCTATACACTTAC+AGG + chr3_4:31982127-31982146 None:intergenic 35.0%
GTATAGATATGCGAGTAAAG+CGG - chr3_4:31982133-31982152 Msa0497690:intron 35.0%
TATAGATATGCGAGTAAAGC+GGG - chr3_4:31982134-31982153 Msa0497690:intron 35.0%
CAGCATGTAGATAACTGATA+TGG + chr3_4:31982420-31982439 None:intergenic 35.0%
AAAGCAAGAGAACAATTTGC+TGG + chr3_4:31982483-31982502 None:intergenic 35.0%
! AAAGAAAACAGCAGCATTGA+GGG + chr3_4:31982533-31982552 None:intergenic 35.0%
AAAAGAAAACAGCAGCATTG+AGG + chr3_4:31982534-31982553 None:intergenic 35.0%
!!! ATGCTGCTGTTTTCTTTTTC+AGG - chr3_4:31982536-31982555 Msa0497690:intron 35.0%
CTTAACATTTGAAAACAGCG+AGG + chr3_4:31982654-31982673 None:intergenic 35.0%
ATCTATCATCAAACCTGTAG+CGG + chr3_4:31982678-31982697 None:intergenic 35.0%
!!! TATATAGGTGTTTTTGGCAC+TGG - chr3_4:31982780-31982799 Msa0497690:intron 35.0%
TGTGTCATGTGTTAACATGT+TGG - chr3_4:31982988-31983007 Msa0497690:intron 35.0%
!! ATGTTGGCTAACCTTTCTTT+TGG - chr3_4:31983004-31983023 Msa0497690:intron 35.0%
GCTTGTACAATTTCTTCAGA+AGG - chr3_4:31983037-31983056 Msa0497690:CDS 35.0%
TTGTTATGGAGTTATATCCC+GGG - chr3_4:31983068-31983087 Msa0497690:CDS 35.0%
! GTCTTTTACTGGAGATACTA+TGG - chr3_4:31983129-31983148 Msa0497690:intron 35.0%
! CTTTTACTGGAGATACTATG+GGG - chr3_4:31983131-31983150 Msa0497690:intron 35.0%
GATCTCAATGATAGCACAAA+TGG - chr3_4:31983175-31983194 Msa0497690:intron 35.0%
AAACTTTAGATCCTTGCCTT+TGG + chr3_4:31983363-31983382 None:intergenic 35.0%
! TTGGTGAATATCTGGTTTCT+CGG + chr3_4:31983395-31983414 None:intergenic 35.0%
TCTACAAGATGATAGAGATC+AGG + chr3_4:31983469-31983488 None:intergenic 35.0%
ATCTTGTAGAGTTCACTCAT+CGG - chr3_4:31983479-31983498 Msa0497690:CDS 35.0%
! AGATTTAGGTTTCTATCGGA+AGG + chr3_4:31983543-31983562 None:intergenic 35.0%
ATTTACACTTTAGACGGAGA+AGG - chr3_4:31983609-31983628 Msa0497690:intron 35.0%
ACGATTGCATGATTCATAGT+AGG + chr3_4:31983655-31983674 None:intergenic 35.0%
CAAACTGAGCAAAGTTTATC+CGG - chr3_4:31983681-31983700 Msa0497690:intron 35.0%
AAACTGAGCAAAGTTTATCC+GGG - chr3_4:31983682-31983701 Msa0497690:intron 35.0%
AAGCAAACCAATGAGTACAT+TGG + chr3_4:31983895-31983914 None:intergenic 35.0%
CATCTGTATGCATTACTAGA+CGG + chr3_4:31983998-31984017 None:intergenic 35.0%
TATGTCAAGACCTTGAACAA+AGG + chr3_4:31984052-31984071 None:intergenic 35.0%
CAGCAAGCTAAAATACCAAA+CGG + chr3_4:31984209-31984228 None:intergenic 35.0%
!!! TTTGGTATTTTAGCTTGCTG+TGG - chr3_4:31984209-31984228 Msa0497690:intron 35.0%
!!! TTGGTATTTTAGCTTGCTGT+GGG - chr3_4:31984210-31984229 Msa0497690:intron 35.0%
TAAGTCTGCCATAAAAGAGT+AGG + chr3_4:31984258-31984277 None:intergenic 35.0%
GGACGACTAGAAAATTAGAT+TGG - chr3_4:31984337-31984356 Msa0497690:CDS 35.0%
CATAAACCAGTCTAAAGACA+TGG + chr3_4:31984479-31984498 None:intergenic 35.0%
AGCTAGGAATTCAAAGATGT+GGG - chr3_4:31984559-31984578 Msa0497690:intron 35.0%
TTCAAAAAAGTAGTGCAGAC+AGG - chr3_4:31984967-31984986 Msa0497690:intron 35.0%
AAACAAACGCTATAGCAAGA+GGG + chr3_4:31985075-31985094 None:intergenic 35.0%
TAAACAAACGCTATAGCAAG+AGG + chr3_4:31985076-31985095 None:intergenic 35.0%
ACCTTTGAATATAATGCTGC+AGG - chr3_4:31985124-31985143 Msa0497690:intron 35.0%
TTTGAATATAATGCTGCAGG+CGG - chr3_4:31985127-31985146 Msa0497690:intron 35.0%
!! AGTGTAAACCTTTTTCATGG+AGG - chr3_4:31985167-31985186 Msa0497690:intron 35.0%
!! GTGTAAACCTTTTTCATGGA+GGG - chr3_4:31985168-31985187 Msa0497690:intron 35.0%
!! TGTAAACCTTTTTCATGGAG+GGG - chr3_4:31985169-31985188 Msa0497690:intron 35.0%
AAAGCTGGAAAATATAGTGG+AGG - chr3_4:31985203-31985222 Msa0497690:intron 35.0%
! AATATAGTGGAGGAATGAAG+AGG - chr3_4:31985213-31985232 Msa0497690:intron 35.0%
! TTTCATTGATTGGAGATCCT+AGG - chr3_4:31985252-31985271 Msa0497690:intron 35.0%
! TTCATTGATTGGAGATCCTA+GGG - chr3_4:31985253-31985272 Msa0497690:intron 35.0%
CATAAGTTCTTTCTTGATGC+AGG + chr3_4:31985417-31985436 None:intergenic 35.0%
CTGCATCAAGAAAGAACTTA+TGG - chr3_4:31985415-31985434 Msa0497690:intron 35.0%
TGTTGTTAATCGTGCAAAAC+AGG - chr3_4:31985440-31985459 Msa0497690:intron 35.0%
!! AGTACTATTTTTCTCCCTCA+TGG - chr3_4:31985483-31985502 Msa0497690:intron 35.0%
AAGGAGGGACTAACAAATTA+TGG + chr3_4:31985753-31985772 None:intergenic 35.0%
GGTTCGATGGTTATATAACA+AGG + chr3_4:31985790-31985809 None:intergenic 35.0%
! ATCTTTAGGAAAAGGTTCGA+TGG + chr3_4:31985803-31985822 None:intergenic 35.0%
CTTAAGACCAAAAAGAGGAA+GGG + chr3_4:31986003-31986022 None:intergenic 35.0%
ACTTAAGACCAAAAAGAGGA+AGG + chr3_4:31986004-31986023 None:intergenic 35.0%
TAAGGACAATGAAACTCGTA+TGG + chr3_4:31986172-31986191 None:intergenic 35.0%
GTCATGAAAACAACATTCAC+AGG + chr3_4:31986200-31986219 None:intergenic 35.0%
CTTTCTTGAATGGAGTTTGT+TGG + chr3_4:31986264-31986283 None:intergenic 35.0%
CTTTATCAACTAAGCTTGGA+TGG + chr3_4:31986314-31986333 None:intergenic 35.0%
! ATAGCTAGAGTTGGTTAAAG+TGG + chr3_4:31986384-31986403 None:intergenic 35.0%
GTGTATAGGAAATCCAAAAG+AGG - chr3_4:31986835-31986854 Msa0497690:intron 35.0%
! GTTAAAGACGGATTCTATAG+GGG - chr3_4:31986900-31986919 Msa0497690:CDS 35.0%
CAGCAAGGTGTATAATCTAT+GGG + chr3_4:31986962-31986981 None:intergenic 35.0%
! TTCTGTGAAGAGTAGTGTTT+TGG - chr3_4:31987067-31987086 Msa0497690:CDS 35.0%
GTTATTGGACTGCCATTATT+AGG + chr3_4:31987118-31987137 None:intergenic 35.0%
GGAGTTAGAGATCATATCAA+CGG + chr3_4:31987224-31987243 None:intergenic 35.0%
GGTTACAAAGTAGACTCAAT+AGG + chr3_4:31987361-31987380 None:intergenic 35.0%
ATTCAACTGTGTATCGAAAC+AGG + chr3_4:31987593-31987612 None:intergenic 35.0%
ATTCAACTGTGTATCGAAAC+AGG + chr3_4:31987593-31987612 None:intergenic 35.0%
TAGAAAACTAAGAGGCCTAT+AGG + chr3_4:31987924-31987943 None:intergenic 35.0%
CAACAAACACAAATGTCACT+TGG + chr3_4:31987983-31988002 None:intergenic 35.0%
GTTGTATGATCATAGCTGAA+AGG - chr3_4:31987999-31988018 Msa0497690:intron 35.0%
TCATAGCTGAAAGGAAGATA+TGG - chr3_4:31988008-31988027 Msa0497690:intron 35.0%
TGAAACGAATGTCGAGAAAT+TGG - chr3_4:31988070-31988089 Msa0497690:intron 35.0%
! ACTTTTGTGTTCCTGAGATA+TGG + chr3_4:31988130-31988149 None:intergenic 35.0%
TAGGAAGAACTTAACCTTCC+AGG - chr3_4:31978741-31978760 Msa0497690:three_prime_UTR 40.0%
CCACTTATAAACACATTGCC+AGG + chr3_4:31979196-31979215 None:intergenic 40.0%
CCTGGCAATGTGTTTATAAG+TGG - chr3_4:31979193-31979212 Msa0497690:intron 40.0%
GATAACGAAAACCTGATAGC+AGG + chr3_4:31979326-31979345 None:intergenic 40.0%
! GCTATCAGGTTTTCGTTATC+GGG - chr3_4:31979326-31979345 Msa0497690:intron 40.0%
GATAACGAAAACCTGATAGC+AGG + chr3_4:31979326-31979345 None:intergenic 40.0%
! GCTATCAGGTTTTCGTTATC+GGG - chr3_4:31979326-31979345 Msa0497690:intron 40.0%
! ATGAAGCACTAACACAGACA+CGG - chr3_4:31979720-31979739 Msa0497690:intron 40.0%
TACCATTGACACGTGAACAT+CGG - chr3_4:31979753-31979772 Msa0497690:intron 40.0%
GCAATATACACAGCACGAAT+GGG + chr3_4:31979927-31979946 None:intergenic 40.0%
AGCAATATACACAGCACGAA+TGG + chr3_4:31979928-31979947 None:intergenic 40.0%
ATTCGTGCTGTGTATATTGC+TGG - chr3_4:31979927-31979946 Msa0497690:intron 40.0%
CACGCATCCACACTTATATT+TGG + chr3_4:31979992-31980011 None:intergenic 40.0%
CAAATATAAGTGTGGATGCG+TGG - chr3_4:31979990-31980009 Msa0497690:intron 40.0%
TAATAGGACAAGCACCAACT+TGG + chr3_4:31980050-31980069 None:intergenic 40.0%
! CATTCCGTAGGGTTAGTAAT+AGG + chr3_4:31980066-31980085 None:intergenic 40.0%
CTATTACTAACCCTACGGAA+TGG - chr3_4:31980064-31980083 Msa0497690:intron 40.0%
ACCGGTACTAATCAGTCTTT+CGG - chr3_4:31980210-31980229 Msa0497690:intron 40.0%
TCCGAAAGACTGATTAGTAC+CGG + chr3_4:31980214-31980233 None:intergenic 40.0%
ACTAATCAGTCTTTCGGAGA+AGG - chr3_4:31980216-31980235 Msa0497690:intron 40.0%
TAGTCATGTTCATAAGACGC+AGG - chr3_4:31980330-31980349 Msa0497690:intron 40.0%
TTCTTTGTGAACACGGATGA+TGG - chr3_4:31980793-31980812 Msa0497690:intron 40.0%
TCTTTGTGAACACGGATGAT+GGG - chr3_4:31980794-31980813 Msa0497690:intron 40.0%
! GACAGAGTACACCAATTTTC+TGG - chr3_4:31980852-31980871 Msa0497690:intron 40.0%
TAAGATGTGCTCAGGCTTTA+CGG - chr3_4:31981294-31981313 Msa0497690:intron 40.0%
ATGGCGTAATAGTTCTTCTG+AGG - chr3_4:31981319-31981338 Msa0497690:intron 40.0%
CAGATCAATGAGATAACTGC+AGG - chr3_4:31981389-31981408 Msa0497690:intron 40.0%
! CGGCTTTGATAGAATTGCAT+TGG - chr3_4:31981575-31981594 Msa0497690:intron 40.0%
! TTGATAGAATTGCATTGGCG+CGG - chr3_4:31981580-31981599 Msa0497690:intron 40.0%
GGTTATTTATGATGCAGCAC+TGG - chr3_4:31981885-31981904 Msa0497690:CDS 40.0%
CATAATCGAAACTGGAACCT+CGG + chr3_4:31981913-31981932 None:intergenic 40.0%
TTCCTACCTTCAGTTTCTGT+TGG - chr3_4:31981976-31981995 Msa0497690:intron 40.0%
TCCTACCTTCAGTTTCTGTT+GGG - chr3_4:31981977-31981996 Msa0497690:intron 40.0%
! TTTAATGGGGTCTCAGGTTT+TGG + chr3_4:31982043-31982062 None:intergenic 40.0%
TCAAACTTTAATGGGGTCTC+AGG + chr3_4:31982049-31982068 None:intergenic 40.0%
AGCCACGTCAAACTTTAATG+GGG + chr3_4:31982056-31982075 None:intergenic 40.0%
GAAGCCACGTCAAACTTTAA+TGG + chr3_4:31982058-31982077 None:intergenic 40.0%
! TTTGACGTGGCTTCTCTTTT+AGG - chr3_4:31982064-31982083 Msa0497690:intron 40.0%
CACTTACAGGAAAAAGTTGC+AGG + chr3_4:31982114-31982133 None:intergenic 40.0%
ATAGATATGCGAGTAAAGCG+GGG - chr3_4:31982135-31982154 Msa0497690:intron 40.0%
GTCCCGTAACAAGATTTACA+TGG + chr3_4:31982242-31982261 None:intergenic 40.0%
ATGATGAAAATGCACGGTCT+CGG - chr3_4:31982353-31982372 Msa0497690:intron 40.0%
!!! GTGATTTTTGGCTCAGTCAT+AGG - chr3_4:31982446-31982465 Msa0497690:intron 40.0%
!!! TTTTGGCTCAGTCATAGGTA+TGG - chr3_4:31982451-31982470 Msa0497690:intron 40.0%
! AAGAAAACAGCAGCATTGAG+GGG + chr3_4:31982532-31982551 None:intergenic 40.0%
TCAAATGTTAAGACCGCTAC+AGG - chr3_4:31982662-31982681 Msa0497690:intron 40.0%
ATGGCAGTGGTTGCATATAT+AGG - chr3_4:31982765-31982784 Msa0497690:intron 40.0%
TATCGACAAAACCTTTGGCT+AGG + chr3_4:31982890-31982909 None:intergenic 40.0%
GTACAATTTCTTCAGAAGGG+TGG - chr3_4:31983041-31983060 Msa0497690:CDS 40.0%
AGAAGGGTGGATCATTGTTA+TGG - chr3_4:31983054-31983073 Msa0497690:CDS 40.0%
TAGCACAAATGGCATGAAAG+AGG - chr3_4:31983186-31983205 Msa0497690:intron 40.0%
GGTCTTGATTATCATGTTCG+TGG - chr3_4:31983207-31983226 Msa0497690:intron 40.0%
TGATTATCATGTTCGTGGAG+TGG - chr3_4:31983212-31983231 Msa0497690:intron 40.0%
GAAACCAGATATTCACCAAG+AGG - chr3_4:31983396-31983415 Msa0497690:CDS 40.0%
CTAACCTCTTGGTGAATATC+TGG + chr3_4:31983403-31983422 None:intergenic 40.0%
TGCAAGCAAAACTAACCTCT+TGG + chr3_4:31983414-31983433 None:intergenic 40.0%
AACTGAGCAAAGTTTATCCG+GGG - chr3_4:31983683-31983702 Msa0497690:intron 40.0%
TGGTAACCCAGAGAAATTTG+CGG - chr3_4:31983711-31983730 Msa0497690:intron 40.0%
! ATTCCAAAGCATTCACCTTC+AGG + chr3_4:31983760-31983779 None:intergenic 40.0%
! TTTGGAATGCTTGGTCCTAA+TGG - chr3_4:31983772-31983791 Msa0497690:CDS 40.0%
GAGTACATTGGCGGAAAAAA+GGG + chr3_4:31983883-31983902 None:intergenic 40.0%
TGAGTACATTGGCGGAAAAA+AGG + chr3_4:31983884-31983903 None:intergenic 40.0%
! TTTTCCGCCAATGTACTCAT+TGG - chr3_4:31983885-31983904 Msa0497690:CDS 40.0%
CAAACCAATGAGTACATTGG+CGG + chr3_4:31983892-31983911 None:intergenic 40.0%
!!! AGAGAGCACCTACTCTTTTA+TGG - chr3_4:31984247-31984266 Msa0497690:intron 40.0%
CAATGTCCATGTCTTTAGAC+TGG - chr3_4:31984470-31984489 Msa0497690:CDS 40.0%
! TGTGGCGTATTTTCCTGTTA+AGG - chr3_4:31984520-31984539 Msa0497690:CDS 40.0%
GAGCTAGGAATTCAAAGATG+TGG - chr3_4:31984558-31984577 Msa0497690:CDS 40.0%
GCTAGGAATTCAAAGATGTG+GGG - chr3_4:31984560-31984579 Msa0497690:intron 40.0%
CTAGGAATTCAAAGATGTGG+GGG - chr3_4:31984561-31984580 Msa0497690:intron 40.0%
AAAGATGTGGGGGCAATATT+TGG - chr3_4:31984571-31984590 Msa0497690:intron 40.0%
GCCTGCAGCATTATATTCAA+AGG + chr3_4:31985128-31985147 None:intergenic 40.0%
TATATGGATGAGCCAAGTAC+TGG - chr3_4:31985384-31985403 Msa0497690:intron 40.0%
GGATGCTTGATAAACAAGGA+GGG + chr3_4:31985768-31985787 None:intergenic 40.0%
CAAGGGATGCTTGATAAACA+AGG + chr3_4:31985772-31985791 None:intergenic 40.0%
GGTGCTTTATCAACTAAGCT+TGG + chr3_4:31986318-31986337 None:intergenic 40.0%
! GTACATTTGTGCTTGTTGCT+AGG + chr3_4:31986362-31986381 None:intergenic 40.0%
GTGCTTGTGAATTGATCATC+CGG - chr3_4:31986436-31986455 Msa0497690:intron 40.0%
! ACACTTTTCAGCACATTCCA+TGG - chr3_4:31986757-31986776 Msa0497690:intron 40.0%
GAAGTCCTATGTGATCGATT+AGG - chr3_4:31986788-31986807 Msa0497690:intron 40.0%
CCAGCAAGGTGTATAATCTA+TGG + chr3_4:31986963-31986982 None:intergenic 40.0%
CCATAGATTATACACCTTGC+TGG - chr3_4:31986960-31986979 Msa0497690:CDS 40.0%
ATCTTCTGTCTTTCCTCATG+TGG + chr3_4:31987153-31987172 None:intergenic 40.0%
! GTAACTGACTTCGTACAAAC+CGG + chr3_4:31987258-31987277 None:intergenic 40.0%
AGCTAGGCTCCTCTATATAA+AGG - chr3_4:31987278-31987297 Msa0497690:intron 40.0%
TAGGCTCCTCTATATAAAGG+TGG - chr3_4:31987281-31987300 Msa0497690:intron 40.0%
ACGAAGCCACCTTTATATAG+AGG + chr3_4:31987290-31987309 None:intergenic 40.0%
AATGTGTCTTGTCTTCGTTG+TGG + chr3_4:31987314-31987333 None:intergenic 40.0%
AGTAGACTCAATAGGAGAGT+CGG + chr3_4:31987353-31987372 None:intergenic 40.0%
AGTCTACTTTGTAACCTCGT+TGG - chr3_4:31987365-31987384 Msa0497690:intron 40.0%
AACGGAGCTATTCTCATTCA+CGG + chr3_4:31987404-31987423 None:intergenic 40.0%
ATGCACTTGTGAGACTGTTT+GGG + chr3_4:31987861-31987880 None:intergenic 40.0%
AATGCACTTGTGAGACTGTT+TGG + chr3_4:31987862-31987881 None:intergenic 40.0%
! CATGTCCTTAGTCTTCCTAT+AGG - chr3_4:31987906-31987925 Msa0497690:intron 40.0%
TAGCTGAAAGGAAGATATGG+AGG - chr3_4:31988011-31988030 Msa0497690:intron 40.0%
GTTTGAGCTACCAAAAGATG+AGG - chr3_4:31988148-31988167 Msa0497690:intron 40.0%
TCTTTGCAGTTTCAACTGCT+TGG + chr3_4:31988193-31988212 None:intergenic 40.0%
AAACTTCCCAGTTTCTGCAT+GGG - chr3_4:31988214-31988233 Msa0497690:intron 40.0%
ATTCATTAAGGTTGCACGTG+AGG - chr3_4:31988265-31988284 Msa0497690:intron 40.0%
GAGAGAGATAGTAACCTGGA+AGG + chr3_4:31978758-31978777 None:intergenic 45.0%
GAGAGAGAGAGATAGTAACC+TGG + chr3_4:31978762-31978781 None:intergenic 45.0%
TTGGCTCACTCACATGCTAT+TGG - chr3_4:31979130-31979149 Msa0497690:intron 45.0%
TAAAGAGTCCCACATCGGAT+AGG - chr3_4:31979164-31979183 Msa0497690:intron 45.0%
CTAACACAACCCCACAAAAC+CGG + chr3_4:31979240-31979259 None:intergenic 45.0%
AACGAAAACCTGATAGCAGG+TGG + chr3_4:31979323-31979342 None:intergenic 45.0%
! ATCTGGAGCATGGACACAAA+TGG + chr3_4:31979359-31979378 None:intergenic 45.0%
AACGAAAACCTGATAGCAGG+TGG + chr3_4:31979323-31979342 None:intergenic 45.0%
! ATCTGGAGCATGGACACAAA+TGG + chr3_4:31979359-31979378 None:intergenic 45.0%
GATGCGTGGAGAATGAATGT+GGG - chr3_4:31980004-31980023 Msa0497690:intron 45.0%
ATGCGTGGAGAATGAATGTG+GGG - chr3_4:31980005-31980024 Msa0497690:intron 45.0%
TCAGGTGTTTGCAGTAAAGG+AGG + chr3_4:31980090-31980109 None:intergenic 45.0%
GGATCAGGTGTTTGCAGTAA+AGG + chr3_4:31980093-31980112 None:intergenic 45.0%
GAAAATCCGTTCTAACAGCG+CGG + chr3_4:31980122-31980141 None:intergenic 45.0%
!! TTGGTTCTGCATAAGGGGTT+TGG + chr3_4:31980162-31980181 None:intergenic 45.0%
AACCCCTTATGCAGAACCAA+TGG - chr3_4:31980162-31980181 Msa0497690:intron 45.0%
!! AGCCATTGGTTCTGCATAAG+GGG + chr3_4:31980167-31980186 None:intergenic 45.0%
!! GAGCCATTGGTTCTGCATAA+GGG + chr3_4:31980168-31980187 None:intergenic 45.0%
!! TGAGCCATTGGTTCTGCATA+AGG + chr3_4:31980169-31980188 None:intergenic 45.0%
CTTTGTGAACACGGATGATG+GGG - chr3_4:31980795-31980814 Msa0497690:intron 45.0%
GAAAGCAGGCTCCAGAAAAT+TGG + chr3_4:31980866-31980885 None:intergenic 45.0%
!! GGAAGCTCTGAAAAGAAAGC+AGG + chr3_4:31980880-31980899 None:intergenic 45.0%
GGTCGATATCTGAACAGGAA+CGG + chr3_4:31980947-31980966 None:intergenic 45.0%
CTAGTGGTCGATATCTGAAC+AGG + chr3_4:31980952-31980971 None:intergenic 45.0%
GAATACATTGTCCATTGCGG+TGG + chr3_4:31981126-31981145 None:intergenic 45.0%
GACCCCATTAAAGTTTGACG+TGG - chr3_4:31982051-31982070 Msa0497690:intron 45.0%
TAGGCGGTCTCTTCTTTACA+TGG - chr3_4:31982083-31982102 Msa0497690:intron 45.0%
AGGCGGTCTCTTCTTTACAT+GGG - chr3_4:31982084-31982103 Msa0497690:intron 45.0%
!! TTTGGCACTGGTCTATTAGC+TGG - chr3_4:31982792-31982811 Msa0497690:intron 45.0%
ATGATGTGCTACCTAGCCAA+AGG - chr3_4:31982876-31982895 Msa0497690:CDS 45.0%
TACACTTTAGACGGAGAAGG+TGG - chr3_4:31983612-31983631 Msa0497690:intron 45.0%
CTCTCACCGCAAATTTCTCT+GGG + chr3_4:31983720-31983739 None:intergenic 45.0%
TCTCTCACCGCAAATTTCTC+TGG + chr3_4:31983721-31983740 None:intergenic 45.0%
TTCACCTTCAGGCAAAGCAA+GGG + chr3_4:31983749-31983768 None:intergenic 45.0%
ATTCACCTTCAGGCAAAGCA+AGG + chr3_4:31983750-31983769 None:intergenic 45.0%
TTGCCTGAAGGTGAATGCTT+TGG - chr3_4:31983754-31983773 Msa0497690:CDS 45.0%
!! GGTGAATGCTTTGGAATGCT+TGG - chr3_4:31983763-31983782 Msa0497690:CDS 45.0%
TTGAACAAAGGCAGTACCTG+AGG + chr3_4:31984040-31984059 None:intergenic 45.0%
! TCAGGTACTGCCTTTGTTCA+AGG - chr3_4:31984039-31984058 Msa0497690:CDS 45.0%
ATTTCCAGCTTACTCGTGCT+GGG + chr3_4:31984118-31984137 None:intergenic 45.0%
AATTTCCAGCTTACTCGTGC+TGG + chr3_4:31984119-31984138 None:intergenic 45.0%
TTGCTGTGGGAAATCTTGAC+AGG - chr3_4:31984223-31984242 Msa0497690:intron 45.0%
TGACTAAAGTGTGTGCAACG+CGG - chr3_4:31984428-31984447 Msa0497690:intron 45.0%
TACGCCACAAACTATTCGCT+CGG + chr3_4:31984509-31984528 None:intergenic 45.0%
! GGCGTATTTTCCTGTTAAGG+TGG - chr3_4:31984523-31984542 Msa0497690:CDS 45.0%
GGGGTTGCTGATAAAAAAGC+TGG - chr3_4:31985188-31985207 Msa0497690:intron 45.0%
! ATAGTGGAGGAATGAAGAGG+AGG - chr3_4:31985216-31985235 Msa0497690:intron 45.0%
GGGATGCTTGATAAACAAGG+AGG + chr3_4:31985769-31985788 None:intergenic 45.0%
! ATCCGATCCCTTCCTCTTTT+TGG - chr3_4:31985993-31986012 Msa0497690:intron 45.0%
GACCAAAAAGAGGAAGGGAT+CGG + chr3_4:31985998-31986017 None:intergenic 45.0%
TCTTGAGTCAAGGAGGAAGT+GGG + chr3_4:31986138-31986157 None:intergenic 45.0%
ATCTTGAGTCAAGGAGGAAG+TGG + chr3_4:31986139-31986158 None:intergenic 45.0%
TACTGCATCTTGAGTCAAGG+AGG + chr3_4:31986145-31986164 None:intergenic 45.0%
TGCTACTGCATCTTGAGTCA+AGG + chr3_4:31986148-31986167 None:intergenic 45.0%
CAACATTCACAGGCTTCGTA+AGG + chr3_4:31986190-31986209 None:intergenic 45.0%
AATTATGTCGAGAAGCCTGC+TGG + chr3_4:31986236-31986255 None:intergenic 45.0%
TGATGCAAAGAAGGCAGAGT+TGG + chr3_4:31986554-31986573 None:intergenic 45.0%
TTCAGCACATTCCATGGAAG+AGG - chr3_4:31986763-31986782 Msa0497690:intron 45.0%
GACGGTAGCTTTCAGTGTAT+AGG - chr3_4:31986821-31986840 Msa0497690:intron 45.0%
! AGACGGATTCTATAGGGGTT+TGG - chr3_4:31986905-31986924 Msa0497690:CDS 45.0%
TTGGACTGCCATTATTAGGC+CGG + chr3_4:31987114-31987133 None:intergenic 45.0%
AGAGTGCGGCTCTATCAATT+AGG - chr3_4:31987197-31987216 Msa0497690:CDS 45.0%
GTACGAAGTCAGTTACAGCT+AGG - chr3_4:31987262-31987281 Msa0497690:intron 45.0%
ACCTCGTTGGATAACTTCCT+TGG - chr3_4:31987378-31987397 Msa0497690:intron 45.0%
TGAGAATAGCTCCGTTGTGT+CGG - chr3_4:31987408-31987427 Msa0497690:intron 45.0%
! CTAGAGGTTTTCCGACACAA+CGG + chr3_4:31987422-31987441 None:intergenic 45.0%
AGAGGCCTATAGGAAGACTA+AGG + chr3_4:31987914-31987933 None:intergenic 45.0%
GAAACTTCCCAGTTTCTGCA+TGG - chr3_4:31988213-31988232 Msa0497690:intron 45.0%
AACTTCCCAGTTTCTGCATG+GGG - chr3_4:31988215-31988234 Msa0497690:intron 45.0%
CTAAACCCCATGCAGAAACT+GGG + chr3_4:31988223-31988242 None:intergenic 45.0%
!! AATATTATTAAAACAAATTT+GGG + chr3_4:31981838-31981857 None:intergenic 5.0%
!! AAATATTATTAAAACAAATT+TGG + chr3_4:31981839-31981858 None:intergenic 5.0%
!!! AAATTTGTTTTAATAATATT+TGG - chr3_4:31981838-31981857 Msa0497690:intron 5.0%
!!! AATTTGTTTTAATAATATTT+GGG - chr3_4:31981839-31981858 Msa0497690:intron 5.0%
!!! ATAAAATAATGAAAAATTTT+AGG - chr3_4:31988458-31988477 Msa0497690:five_prime_UTR 5.0%
GTTTGCTTGAGTCCAGAAGC+TGG + chr3_4:31978713-31978732 None:intergenic 50.0%
CTCAAGCAAACGCGCTTCTT+AGG - chr3_4:31978722-31978741 Msa0497690:three_prime_UTR 50.0%
!! ACCTCACAAGCCGGTTTTGT+GGG - chr3_4:31979227-31979246 Msa0497690:intron 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - chr3_4:31979238-31979257 Msa0497690:intron 50.0%
! GCATGGACACAAATGGTGGA+TGG + chr3_4:31979352-31979371 None:intergenic 50.0%
TGGAGCATGGACACAAATGG+TGG + chr3_4:31979356-31979375 None:intergenic 50.0%
ATGTCCAGTCCTAGACGTGA+GGG - chr3_4:31979377-31979396 Msa0497690:intron 50.0%
TAACACACACCCTCACGTCT+AGG + chr3_4:31979389-31979408 None:intergenic 50.0%
! GCATGGACACAAATGGTGGA+TGG + chr3_4:31979352-31979371 None:intergenic 50.0%
TGGAGCATGGACACAAATGG+TGG + chr3_4:31979356-31979375 None:intergenic 50.0%
ATGTCCAGTCCTAGACGTGA+GGG - chr3_4:31979377-31979396 Msa0497690:intron 50.0%
TAACACACACCCTCACGTCT+AGG + chr3_4:31979389-31979408 None:intergenic 50.0%
TGCCGATGTTCACGTGTCAA+TGG + chr3_4:31979758-31979777 None:intergenic 50.0%
GGATGCGTGGAGAATGAATG+TGG - chr3_4:31980003-31980022 Msa0497690:intron 50.0%
GTAAAGGAGGCCATTCCGTA+GGG + chr3_4:31980077-31980096 None:intergenic 50.0%
AGTAAAGGAGGCCATTCCGT+AGG + chr3_4:31980078-31980097 None:intergenic 50.0%
ACGATACCGCGCTGTTAGAA+CGG - chr3_4:31980113-31980132 Msa0497690:intron 50.0%
! ACCGGTGAAGAGCATAGTGA+GGG + chr3_4:31980196-31980215 None:intergenic 50.0%
! TACCGGTGAAGAGCATAGTG+AGG + chr3_4:31980197-31980216 None:intergenic 50.0%
GTGCTCAGGCTTTACGGTTA+TGG - chr3_4:31981300-31981319 Msa0497690:intron 50.0%
GCCCAACAGAAACTGAAGGT+AGG + chr3_4:31981981-31982000 None:intergenic 50.0%
CAGAGCCCAACAGAAACTGA+AGG + chr3_4:31981985-31982004 None:intergenic 50.0%
CTTCAGTTTCTGTTGGGCTC+TGG - chr3_4:31981983-31982002 Msa0497690:intron 50.0%
! GACGTGGCTTCTCTTTTAGG+CGG - chr3_4:31982067-31982086 Msa0497690:intron 50.0%
AAAATGCACGGTCTCGGTGA+TGG - chr3_4:31982359-31982378 Msa0497690:intron 50.0%
AAATGCACGGTCTCGGTGAT+GGG - chr3_4:31982360-31982379 Msa0497690:intron 50.0%
CCACGATATAAGGCAAACCC+GGG + chr3_4:31983088-31983107 None:intergenic 50.0%
CCCACGATATAAGGCAAACC+CGG + chr3_4:31983089-31983108 None:intergenic 50.0%
CCGGGTTTGCCTTATATCGT+GGG - chr3_4:31983086-31983105 Msa0497690:CDS 50.0%
GGAGATACTATGGGGACTCA+TGG - chr3_4:31983139-31983158 Msa0497690:intron 50.0%
CTATGGGGACTCATGGTATG+CGG - chr3_4:31983146-31983165 Msa0497690:intron 50.0%
TTCGGAAGCCTAGTCTCCAA+AGG - chr3_4:31983344-31983363 Msa0497690:CDS 50.0%
AAGCCTAGTCTCCAAAGGCA+AGG - chr3_4:31983349-31983368 Msa0497690:CDS 50.0%
! GATCCTTGCCTTTGGAGACT+AGG + chr3_4:31983355-31983374 None:intergenic 50.0%
! CTATCGGAAGGTGTGTGTTG+TGG + chr3_4:31983531-31983550 None:intergenic 50.0%
TGAGCAAAGTTTATCCGGGG+AGG - chr3_4:31983686-31983705 Msa0497690:intron 50.0%
GAGCAAAGTTTATCCGGGGA+GGG - chr3_4:31983687-31983706 Msa0497690:intron 50.0%
AAAGTTTATCCGGGGAGGGA+TGG - chr3_4:31983691-31983710 Msa0497690:intron 50.0%
ATGCTTGGTCCTAATGGTGC+TGG - chr3_4:31983778-31983797 Msa0497690:CDS 50.0%
TGCTTGGTCCTAATGGTGCT+GGG - chr3_4:31983779-31983798 Msa0497690:CDS 50.0%
GAAGTCTTCCCAGCACCATT+AGG + chr3_4:31983790-31983809 None:intergenic 50.0%
GGTCTTACAAAGCCAACCTC+AGG - chr3_4:31984021-31984040 Msa0497690:CDS 50.0%
ACAAAGGCAGTACCTGAGGT+TGG + chr3_4:31984036-31984055 None:intergenic 50.0%
TTTCCAGCTTACTCGTGCTG+GGG + chr3_4:31984117-31984136 None:intergenic 50.0%
ACAAACTATTCGCTCGGGAG+AGG + chr3_4:31984503-31984522 None:intergenic 50.0%
TCTCCCGAGCGAATAGTTTG+TGG - chr3_4:31984502-31984521 Msa0497690:CDS 50.0%
ACGCCACAAACTATTCGCTC+GGG + chr3_4:31984508-31984527 None:intergenic 50.0%
CTATAGATCCATGCCACCAG+TGG + chr3_4:31985021-31985040 None:intergenic 50.0%
GAATATAATGCTGCAGGCGG+TGG - chr3_4:31985130-31985149 Msa0497690:intron 50.0%
CAGCAACCCCTCCATGAAAA+AGG + chr3_4:31985178-31985197 None:intergenic 50.0%
GCAGGGTCTAATCCAGTACT+TGG + chr3_4:31985399-31985418 None:intergenic 50.0%
! GAAGTGGGTTCCTGACTCAA+AGG + chr3_4:31986123-31986142 None:intergenic 50.0%
ACCTACAGCAACAAACCAGC+AGG - chr3_4:31986218-31986237 Msa0497690:CDS 50.0%
TAGGACTTCTGCCTCTTCCA+TGG + chr3_4:31986777-31986796 None:intergenic 50.0%
! TTGTGCGCAGTAAAGAGCAC+AGG + chr3_4:31987178-31987197 None:intergenic 50.0%
CTTTACTGCGCACAAGAGTG+CGG - chr3_4:31987183-31987202 Msa0497690:CDS 50.0%
TGACTTCGTACAAACCGGCA+GGG + chr3_4:31987253-31987272 None:intergenic 50.0%
TAGGAGAGTCGGTGGAAAAG+TGG + chr3_4:31987342-31987361 None:intergenic 50.0%
AGACTCAATAGGAGAGTCGG+TGG + chr3_4:31987350-31987369 None:intergenic 50.0%
GCCAAGGAAGTTATCCAACG+AGG + chr3_4:31987382-31987401 None:intergenic 50.0%
GCTATTCTCATTCACGGCCA+AGG + chr3_4:31987398-31987417 None:intergenic 50.0%
GCTAAACCCCATGCAGAAAC+TGG + chr3_4:31988224-31988243 None:intergenic 50.0%
GGGTTTAGCTGACACCACAT+TGG - chr3_4:31988235-31988254 Msa0497690:intron 50.0%
GTCCCACATCGGATAGGAGA+TGG - chr3_4:31979170-31979189 Msa0497690:intron 55.0%
GGCCATCTCCTATCCGATGT+GGG + chr3_4:31979175-31979194 None:intergenic 55.0%
AGGCCATCTCCTATCCGATG+TGG + chr3_4:31979176-31979195 None:intergenic 55.0%
ACATCGGATAGGAGATGGCC+TGG - chr3_4:31979175-31979194 Msa0497690:intron 55.0%
GCAATCCTCACCTCACAAGC+CGG - chr3_4:31979218-31979237 Msa0497690:intron 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG + chr3_4:31979226-31979245 None:intergenic 55.0%
!! CACCTCACAAGCCGGTTTTG+TGG - chr3_4:31979226-31979245 Msa0497690:intron 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG - chr3_4:31979228-31979247 Msa0497690:intron 55.0%
CCTGATAGCAGGTGGCTCAA+CGG + chr3_4:31979315-31979334 None:intergenic 55.0%
! AGGACTGGACATCTGGAGCA+TGG + chr3_4:31979369-31979388 None:intergenic 55.0%
! CACGTCTAGGACTGGACATC+TGG + chr3_4:31979376-31979395 None:intergenic 55.0%
GATGTCCAGTCCTAGACGTG+AGG - chr3_4:31979376-31979395 Msa0497690:intron 55.0%
AGCCTCCTCCATGATCCGTT+GGG - chr3_4:31979297-31979316 Msa0497690:intron 55.0%
! AGGACTGGACATCTGGAGCA+TGG + chr3_4:31979369-31979388 None:intergenic 55.0%
! CACGTCTAGGACTGGACATC+TGG + chr3_4:31979376-31979395 None:intergenic 55.0%
GATGTCCAGTCCTAGACGTG+AGG - chr3_4:31979376-31979395 Msa0497690:intron 55.0%
GTTCTAACAGCGCGGTATCG+TGG + chr3_4:31980114-31980133 None:intergenic 55.0%
AGTGAGGGGACATGAGCCAT+TGG + chr3_4:31980181-31980200 None:intergenic 55.0%
! CCGGTGAAGAGCATAGTGAG+GGG + chr3_4:31980195-31980214 None:intergenic 55.0%
CCCCTCACTATGCTCTTCAC+CGG - chr3_4:31980192-31980211 Msa0497690:intron 55.0%
CTTACCTTGCTGCACGCTAG+TGG + chr3_4:31980968-31980987 None:intergenic 55.0%
TGCTAGTGTCTCCACCGCAA+TGG - chr3_4:31981112-31981131 Msa0497690:intron 55.0%
!! GTCTCGGTGATGGGCCATAT+TGG - chr3_4:31982369-31982388 Msa0497690:intron 55.0%
CCCGGGTTTGCCTTATATCG+TGG - chr3_4:31983085-31983104 Msa0497690:CDS 55.0%
CTGTCCCTTGCTTTGCCTGA+AGG - chr3_4:31983742-31983761 Msa0497690:CDS 55.0%
TTCCAGCTTACTCGTGCTGG+GGG + chr3_4:31984116-31984135 None:intergenic 55.0%
CCACTGCATGCCACCTTAAC+AGG + chr3_4:31984536-31984555 None:intergenic 55.0%
CCTGTTAAGGTGGCATGCAG+TGG - chr3_4:31984533-31984552 Msa0497690:CDS 55.0%
GTTAAGGTGGCATGCAGTGG+CGG - chr3_4:31984536-31984555 Msa0497690:CDS 55.0%
AGCCACTCACAACACTGTGG+GGG + chr3_4:31984995-31985014 None:intergenic 55.0%
GAGCCACTCACAACACTGTG+GGG + chr3_4:31984996-31985015 None:intergenic 55.0%
GGAGCCACTCACAACACTGT+GGG + chr3_4:31984997-31985016 None:intergenic 55.0%
TAGATCCATGCCACCAGTGG+CGG + chr3_4:31985018-31985037 None:intergenic 55.0%
!! GCCTGCTGGTTTGTTGCTGT+AGG + chr3_4:31986222-31986241 None:intergenic 55.0%
CATTATTAGGCCGGCGACGT+GGG + chr3_4:31987105-31987124 None:intergenic 55.0%
! TGGCGAGGATTGCGGGTTAT+TGG + chr3_4:31987133-31987152 None:intergenic 55.0%
TCCTCATGTGGCGAGGATTG+CGG + chr3_4:31987141-31987160 None:intergenic 55.0%
CTGTCTTTCCTCATGTGGCG+AGG + chr3_4:31987148-31987167 None:intergenic 55.0%
TTCGTACAAACCGGCAGGGA+AGG + chr3_4:31987249-31987268 None:intergenic 55.0%
CTGACTTCGTACAAACCGGC+AGG + chr3_4:31987254-31987273 None:intergenic 55.0%
CCAGAAGCTGGCAGGATCGT+TGG + chr3_4:31978701-31978720 None:intergenic 60.0%
CCAACGATCCTGCCAGCTTC+TGG - chr3_4:31978698-31978717 Msa0497690:three_prime_UTR 60.0%
GCTTGAGTCCAGAAGCTGGC+AGG + chr3_4:31978709-31978728 None:intergenic 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG + chr3_4:31979231-31979250 None:intergenic 60.0%
GGCTCAACGGATCATGGAGG+AGG + chr3_4:31979302-31979321 None:intergenic 60.0%
GGTGGCTCAACGGATCATGG+AGG + chr3_4:31979305-31979324 None:intergenic 60.0%
GCAGGTGGCTCAACGGATCA+TGG + chr3_4:31979308-31979327 None:intergenic 60.0%
CCGTTGAGCCACCTGCTATC+AGG - chr3_4:31979312-31979331 Msa0497690:intron 60.0%
! CACACCCTCACGTCTAGGAC+TGG + chr3_4:31979384-31979403 None:intergenic 60.0%
GAGCCTCCTCCATGATCCGT+TGG - chr3_4:31979296-31979315 Msa0497690:intron 60.0%
CCTGATAGCAGGTGGCCCAA+CGG + chr3_4:31979487-31979506 None:intergenic 60.0%
! CACACCCTCACGTCTAGGAC+TGG + chr3_4:31979384-31979403 None:intergenic 60.0%
ACAGCGCGGTATCGTGGATC+AGG + chr3_4:31980108-31980127 None:intergenic 60.0%
TCGACCACTAGCGTGCAGCA+AGG - chr3_4:31980961-31980980 Msa0497690:intron 60.0%
TTAGGGAGGGAGGGAGAGAG+AGG - chr3_4:31981694-31981713 Msa0497690:CDS 60.0%
TAGGGAGGGAGGGAGAGAGA+GGG - chr3_4:31981695-31981714 Msa0497690:CDS 60.0%
! ATGATGCAGCACTGGAGCCG+AGG - chr3_4:31981893-31981912 Msa0497690:CDS 60.0%
! GCGAGTAAAGCGGGGAGTGT+TGG - chr3_4:31982143-31982162 Msa0497690:intron 60.0%
TGGGGACTCATGGTATGCGG+TGG - chr3_4:31983149-31983168 Msa0497690:intron 60.0%
GGGGACTCATGGTATGCGGT+GGG - chr3_4:31983150-31983169 Msa0497690:intron 60.0%
GGGACTCATGGTATGCGGTG+GGG - chr3_4:31983151-31983170 Msa0497690:intron 60.0%
TCTGGGTTACCATCCCTCCC+CGG + chr3_4:31983703-31983722 None:intergenic 60.0%
AGCCCCCACAGTGTTGTGAG+TGG - chr3_4:31984990-31985009 Msa0497690:intron 60.0%
CGGAGCCACTCACAACACTG+TGG + chr3_4:31984998-31985017 None:intergenic 60.0%
CCATTATTAGGCCGGCGACG+TGG + chr3_4:31987106-31987125 None:intergenic 60.0%
CCACGTCGCCGGCCTAATAA+TGG - chr3_4:31987103-31987122 Msa0497690:CDS 60.0%
CCTCATGTGGCGAGGATTGC+GGG + chr3_4:31987140-31987159 None:intergenic 60.0%
TACAAACCGGCAGGGAAGGC+GGG + chr3_4:31987245-31987264 None:intergenic 60.0%
GTACAAACCGGCAGGGAAGG+CGG + chr3_4:31987246-31987265 None:intergenic 60.0%
GGCCCAACGGATCATGGAGG+AGG + chr3_4:31979474-31979493 None:intergenic 65.0%
GGTGGCCCAACGGATCATGG+AGG + chr3_4:31979477-31979496 None:intergenic 65.0%
GCAGGTGGCCCAACGGATCA+TGG + chr3_4:31979480-31979499 None:intergenic 65.0%
CCGTTGGGCCACCTGCTATC+AGG - chr3_4:31979484-31979503 Msa0497690:intron 65.0%
TGCCCCCAGCACGAGTAAGC+TGG - chr3_4:31984111-31984130 Msa0497690:intron 65.0%
! TGGCATGCAGTGGCGGAGCT+AGG - chr3_4:31984543-31984562 Msa0497690:CDS 65.0%
GTTGTGAGTGGCTCCGCCAC+TGG - chr3_4:31985002-31985021 Msa0497690:intron 65.0%
TAAGCCTCAGCCCACGTCGC+CGG - chr3_4:31987092-31987111 Msa0497690:CDS 65.0%
CCCGCAATCCTCGCCACATG+AGG - chr3_4:31987137-31987156 Msa0497690:CDS 65.0%
CTAACTCCCGCCTTCCCTGC+CGG - chr3_4:31987236-31987255 Msa0497690:intron 65.0%
GTGAGTGGCTCCGCCACTGG+TGG - chr3_4:31985005-31985024 Msa0497690:intron 70.0%
TGGCTCCGCCACTGGTGGCA+TGG - chr3_4:31985010-31985029 Msa0497690:intron 70.0%
! TAGGCCGGCGACGTGGGCTG+AGG + chr3_4:31987099-31987118 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 31978647 31988488 31978647 ID=Msa0497690;Name=Msa0497690
chr3_4 mRNA 31978647 31988488 31978647 ID=Msa0497690-mRNA-1;Parent=Msa0497690;Name=Msa0497690-mRNA-1;_AED=0.14;_eAED=0.14;_QI=32|0.86|0.93|1|1|1|16|175|843
chr3_4 exon 31978647 31979121 31978647 ID=Msa0497690-mRNA-1:exon:6979;Parent=Msa0497690-mRNA-1
chr3_4 exon 31981692 31981757 31981692 ID=Msa0497690-mRNA-1:exon:6978;Parent=Msa0497690-mRNA-1
chr3_4 exon 31981861 31981989 31981861 ID=Msa0497690-mRNA-1:exon:6977;Parent=Msa0497690-mRNA-1
chr3_4 exon 31982829 31982913 31982829 ID=Msa0497690-mRNA-1:exon:6976;Parent=Msa0497690-mRNA-1
chr3_4 exon 31983011 31983120 31983011 ID=Msa0497690-mRNA-1:exon:6975;Parent=Msa0497690-mRNA-1
chr3_4 exon 31983313 31983513 31983313 ID=Msa0497690-mRNA-1:exon:6974;Parent=Msa0497690-mRNA-1
chr3_4 exon 31983718 31984079 31983718 ID=Msa0497690-mRNA-1:exon:6973;Parent=Msa0497690-mRNA-1
chr3_4 exon 31984280 31984363 31984280 ID=Msa0497690-mRNA-1:exon:6972;Parent=Msa0497690-mRNA-1
chr3_4 exon 31984452 31984577 31984452 ID=Msa0497690-mRNA-1:exon:6971;Parent=Msa0497690-mRNA-1
chr3_4 exon 31984668 31984830 31984668 ID=Msa0497690-mRNA-1:exon:6970;Parent=Msa0497690-mRNA-1
chr3_4 exon 31985512 31985636 31985512 ID=Msa0497690-mRNA-1:exon:6969;Parent=Msa0497690-mRNA-1
chr3_4 exon 31985725 31985844 31985725 ID=Msa0497690-mRNA-1:exon:6968;Parent=Msa0497690-mRNA-1
chr3_4 exon 31986153 31986297 31986153 ID=Msa0497690-mRNA-1:exon:6967;Parent=Msa0497690-mRNA-1
chr3_4 exon 31986490 31986569 31986490 ID=Msa0497690-mRNA-1:exon:6966;Parent=Msa0497690-mRNA-1
chr3_4 exon 31986898 31987249 31986898 ID=Msa0497690-mRNA-1:exon:6965;Parent=Msa0497690-mRNA-1
chr3_4 exon 31988373 31988488 31988373 ID=Msa0497690-mRNA-1:exon:6964;Parent=Msa0497690-mRNA-1
chr3_4 five_prime_UTR 31988457 31988488 31988457 ID=Msa0497690-mRNA-1:five_prime_utr;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31988373 31988456 31988373 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31986898 31987249 31986898 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31986490 31986569 31986490 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31986153 31986297 31986153 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31985725 31985844 31985725 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31985512 31985636 31985512 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31984668 31984830 31984668 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31984452 31984577 31984452 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31984280 31984363 31984280 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31983718 31984079 31983718 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31983313 31983513 31983313 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31983011 31983120 31983011 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31982829 31982913 31982829 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31981861 31981989 31981861 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31981692 31981757 31981692 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 CDS 31978822 31979121 31978822 ID=Msa0497690-mRNA-1:cds;Parent=Msa0497690-mRNA-1
chr3_4 three_prime_UTR 31978647 31978821 31978647 ID=Msa0497690-mRNA-1:three_prime_utr;Parent=Msa0497690-mRNA-1
Gene Sequence

>Msa0497690

ATGAGAAATACAAACAGAGCCAACGATCCTGCCAGCTTCTGGACTCAAGCAAACGCGCTTCTTAGGAAGAACTTAACCTTCCAGAAACGAAATGTGAAGACAAACATAAGGCTGATCTTGTTCCCATTCGTGCTGTGTATATTGCTGGTTCTAATTCAAACTATTCTCAATAATCAATTTGATAAGGCCAAATATAAGTGTGGATGCGTGGAGAATGAATGTGGGGTTCAATATTCGGATTTTGACCAAGTTGGTGCTTGTCCTATTACTAACCCTACGGAATGGCCTCCTTTACTGCAAACACCTGATCCACGATACCGCGCTGTTAGAACGGATTTTCTTCCGTTTTCTGATTTTCCAAACCCCTTATGCAGAACCAATGGCTCATGTCCCCTCACTATGCTCTTCACCGGTACTAATCAGTCTTTCGGAGAAGTCTTGTCAAGGAATATGATCCCAAGTACCATTGATATAGATAATTCAAATGTTATGGATAGTTTCGCGACAAATGTCTTTGGATCGTCATCAGAGACAGAGTACACCAATTTTCTGGAGCCTGCTTTCTTTTCAGAGCTTCCCATTTACTATCTACAAAGTCAGTGCAGAAAGAACTCTACATTGTCCGTTCCTGTTCAGATATCGACCACTAGCGTGCAGCAAGAGTTAAGATGTGCTCAGGCTTTACGGTTATGGCGTAATAGTTCTTCTGAGGTAAACAATGCTCTATATAAAGGTTATAGAAAAGGTAACACAGAGAGACAGATCAATGAGATAACTGCAGGTTATGATTTTCTAGATTCAAATGAGAATATATTTAATGTCAGTATATGGTACAATTCAACCTATAAAAATGACACCGGCTTTGATAGAATTGCATTGGCGCGGATTCCTCGTTCTGTAAATTTGGTTGTCCTCACATCATTAGTTTATGAGAAGCAACAAAATTTAAGAATCATGATGAAAATGCACGGTCTCGGTGATGGGCCATATTGGATTATTTCTTATAGTTATTTTCTTGCCATATCAGTTATCTACATGCTGTGTTTTGTGATTTTTGGCTCAGTCATAGGATTAAAATTCTTCACAATGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAACTTACAAATTTCGCTGGCATTTTTATTGGCCTCGCTGTTTTCAAATGTTAAGACCGCTACAGTGGTTGCATATATAGGTGTTTTTGGCACTGGTCTATTAGCTGGTTTTCTTTTCCAATTTTTTATTCAAGATACATCGTTTCCAAAAGGGTGGATCATTGTTATGGAGTTATATCCCGGGTTTGCCTTATATCGTGGGTTATATGAATTTTCACAATCGTCTTTTACTGGAGATACTATGGGGACTCATGGTATGCGGTGGGGAGATCTCAATGATAGCACAAATGGCATGAAAGAGGTCTTGATTATCATGTTCGTGGAGTGGCTATTAGTTTTGTTCTTCGCTTATTACATCGATCAAGTTTTATCAACAGGAAGTTGGAAAAATCCTCTTTTGTTCTTGAAAGGATTTCAGAAAAAACTTGGTTCATCTTTTCGGAAGCCTAGTCTCCAAAGGCAAGGATCTAAAGTTTTTGTTATGACCGAGAAACCAGATATTCACCAAGAGACGGAGAAGGTGGAGCAGCTGCTACTTGAACCTACTATGAATCATGCAATCGTTTGTGACAAACTGAGCAAAGTTTATCCGGGGAGGGATGGTAACCCAGAGAAATTTGCGGTGAGAGAGCTGTCCCTTGCTTTGCCTGAAGGTGAATGCTTTGGAATGCTTGGTCCTAATGGTGCTGGGAAGACTTCTTTTATCAACATGATGATAGGTCTTACAAAGCCAACCTCAGGTACTGCCTTTGTTCAAGGTCTTGACATAAGAACTGATATGAATGGAATATATACTAGCATGGGTGTATGCCCCCAGCACGACTTGCTGTGGGAAATCTTGACAGGAAGAGAGCACCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCCGCCTTAACACAAGCGGTGGAAGAATCTTTGAAAAGTGTAAACCTTTTTCATGGAGGGGTTGCTGATAAAAAAGCTGGAAAATATAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCTAGGGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAAGAACTTATGGAATGTTCTGAAAGGAAGATATGGAGGAACTTATGTATTCTCAATGGCAACATCTACTGATCATGAAACGAATGTCGAGAAATTGGTGCAACAACTCTCCTCAAATGCTAAGAAGATTTACCATATCTCAGGAACACAAAAGTTTGAGCTACCAAAAGATGAGGTTAAAATATCTAATGTATTCCAAGCAGTTGAAACTGCAAAGAGAAACTTCCCAGTTTCTGCATGGGGTTTAGCTGACACCACATTGGAAGATGTATTCATTAAGGTTGCACGTGAGGCTCAGCCATTTCATACTTTGTCATAA
Protein sequence

>Msa0497690

MRNTNRANDPASFWTQANALLRKNLTFQKRNVKTNIRLILFPFVLCILLVLIQTILNNQFDKAKYKCGCVENECGVQYSDFDQVGACPITNPTEWPPLLQTPDPRYRAVRTDFLPFSDFPNPLCRTNGSCPLTMLFTGTNQSFGEVLSRNMIPSTIDIDNSNVMDSFATNVFGSSSETEYTNFLEPAFFSELPIYYLQSQCRKNSTLSVPVQISTTSVQQELRCAQALRLWRNSSSEVNNALYKGYRKGNTERQINEITAGYDFLDSNENIFNVSIWYNSTYKNDTGFDRIALARIPRSVNLVVLTSLVYEKQQNLRIMMKMHGLGDGPYWIISYSYFLAISVIYMLCFVIFGSVIGLKFFTMNDYSIQFVFYFIYINLQISLAFLLASLFSNVKTATVVAYIGVFGTGLLAGFLFQFFIQDTSFPKGWIIVMELYPGFALYRGLYEFSQSSFTGDTMGTHGMRWGDLNDSTNGMKEVLIIMFVEWLLVLFFAYYIDQVLSTGSWKNPLLFLKGFQKKLGSSFRKPSLQRQGSKVFVMTEKPDIHQETEKVEQLLLEPTMNHAIVCDKLSKVYPGRDGNPEKFAVRELSLALPEGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTDMNGIYTSMGVCPQHDLLWEILTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRKNLWNVLKGRYGGTYVFSMATSTDHETNVEKLVQQLSSNAKKIYHISGTQKFELPKDEVKISNVFQAVETAKRNFPVSAWGLADTTLEDVFIKVAREAQPFHTLS*