AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566530 MtrunA17_Chr8g0381021 82.515 652 53 4 14 664 13 604 0.0 1046
Msa0566530 MtrunA17_Chr8g0381031 81.138 668 68 5 1 668 1 610 0.0 988
Msa0566530 MtrunA17_Chr8g0381051 61.927 633 178 8 22 654 26 595 0.0 734
Msa0566530 MtrunA17_Chr1g0160231 59.508 610 185 5 29 637 23 571 0.0 728
Msa0566530 MtrunA17_Chr2g0296921 51.987 629 241 4 20 647 19 587 0.0 660
Msa0566530 MtrunA17_Chr8g0358951 43.065 620 290 9 20 637 26 584 2.25e-167 492
Msa0566530 MtrunA17_Chr1g0210461 35.861 633 328 10 29 648 6 573 1.94e-122 376
Msa0566530 MtrunA17_Chr4g0055481 37.807 611 304 10 35 634 5 550 9.03e-119 366
Msa0566530 MtrunA17_Chr6g0463361 48.760 242 118 3 405 642 1 240 1.24e-73 237
Msa0566530 MtrunA17_Chr6g0460881 31.733 479 259 7 35 505 6 424 2.92e-68 234
Msa0566530 MtrunA17_Chr6g0460911 31.473 448 240 5 66 505 39 427 5.86e-65 226
Msa0566530 MtrunA17_Chr7g0254061 32.653 441 230 5 73 505 32 413 8.44e-65 225
Msa0566530 MtrunA17_Chr6g0460891 31.982 444 235 6 70 505 33 417 8.62e-65 227
Msa0566530 MtrunA17_Chr6g0460901 29.158 487 274 6 26 505 3 425 4.32e-64 223
Msa0566530 MtrunA17_Chr7g0215781 27.393 606 349 12 42 631 24 554 6.57e-57 202
Msa0566530 MtrunA17_Chr7g0254011 35.826 321 199 2 192 505 99 419 1.92e-53 194
Msa0566530 MtrunA17_Chr7g0254011 42.222 90 51 1 64 153 29 117 2.73e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566530 AT4G21120.1 60.243 659 189 6 9 664 4 592 0.0 792
Msa0566530 AT2G34960.1 50.564 621 246 4 12 631 3 563 0.0 621
Msa0566530 AT4G21120.2 65.342 453 146 2 212 664 1 442 0.0 612
Msa0566530 AT1G17120.1 46.204 619 271 5 14 631 22 579 2.19e-180 525
Msa0566530 AT5G04770.1 37.480 611 305 9 31 627 15 562 2.59e-128 392
Msa0566530 AT3G10600.1 39.735 453 242 6 195 627 120 561 4.70e-107 337
Msa0566530 AT3G10600.1 44.444 126 69 1 28 153 11 135 9.90e-23 103
Msa0566530 AT3G10600.2 39.070 430 231 6 222 631 1 419 5.76e-98 308
Msa0566530 AT5G04770.3 39.857 419 235 5 222 627 1 415 4.43e-94 298
Msa0566530 AT5G04770.2 36.795 443 210 6 31 462 15 398 2.17e-90 287
Msa0566530 AT5G36940.1 33.032 442 231 5 71 505 27 410 2.31e-69 238
Msa0566530 AT3G03720.1 31.373 459 248 6 54 505 7 405 1.43e-65 227
Msa0566530 AT1G58030.1 31.377 443 239 5 70 505 37 421 8.23e-65 226
Msa0566530 AT1G05940.1 25.289 605 355 9 65 648 40 568 2.82e-54 195
Msa0566530 AT1G05940.3 25.939 559 324 8 65 602 40 529 3.58e-51 186
Msa0566530 AT1G05940.4 27.273 451 254 5 65 504 40 427 4.75e-50 182
Msa0566530 AT1G05940.2 26.087 460 301 6 210 648 9 450 6.18e-41 155

Find 174 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTGGAATTTCAGCTTAT+TGG 0.122057 4_1:-67646126 Msa0566530:CDS
ATACATATCAAGTTATTAAT+TGG 0.204469 4_1:+67645715 None:intergenic
TTGGTATACTATGTGCTATT+AGG 0.217718 4_1:-67645875 Msa0566530:CDS
TCAATGACTTCACTCCTTTC+GGG 0.224601 4_1:-67646765 Msa0566530:CDS
GCTATTAACATATTCCTTCT+TGG 0.225477 4_1:-67645950 Msa0566530:CDS
AATTGGAATTTCAGCTTATT+GGG 0.231227 4_1:-67646125 Msa0566530:CDS
TTCAATGACTTCACTCCTTT+CGG 0.234746 4_1:-67646766 Msa0566530:CDS
TTGCTCCTTTGTGGTTTATA+GGG 0.241128 4_1:-67646063 Msa0566530:CDS
TTTGCTCCTTTGTGGTTTAT+AGG 0.244832 4_1:-67646064 Msa0566530:CDS
GTGTGGCTTGTGTTGATTAT+TGG 0.248233 4_1:-67646154 Msa0566530:CDS
ACTTGATATGTATATGTTAA+AGG 0.260733 4_1:-67645705 Msa0566530:three_prime_UTR
CTAATAGTAGTGAGCATAAT+TGG 0.262172 4_1:-67646102 Msa0566530:CDS
CGCAGAGCTGGTGGAGATTA+AGG 0.270062 4_1:-67653399 Msa0566530:CDS
GAAATTTGTTTCTTTAATTT+CGG 0.276291 4_1:-67645655 Msa0566530:three_prime_UTR
CGTATATAAGGTTTACGATT+TGG 0.279431 4_1:-67645910 Msa0566530:CDS
GGGGAGTTCCTTTGGTTCCT+TGG 0.281218 4_1:-67645991 Msa0566530:CDS
GTTGCAGAGGGTGGCAAAAT+AGG 0.283118 4_1:+67647005 None:intergenic
TTATAGGGACTGGTGCTCTT+TGG 0.283313 4_1:-67646048 Msa0566530:CDS
TGGTATACTATGTGCTATTA+GGG 0.320967 4_1:-67645874 Msa0566530:CDS
CTTTGATGCAGTTTCAACTA+TGG 0.326491 4_1:-67646692 Msa0566530:CDS
CATCTTGACCCTATTGCTAT+TGG 0.330251 4_1:-67646928 Msa0566530:CDS
TGGTTCGCAAGTACCGAATT+CGG 0.331695 4_1:+67647215 None:intergenic
TGGCAAAGAAGCCTAAATTA+TGG 0.332142 4_1:-67646012 Msa0566530:CDS
TGCTTACTTGAGAGTAGAAA+TGG 0.338114 4_1:-67647112 Msa0566530:CDS
AAAGGAACTCCCCATAATTT+AGG 0.346807 4_1:+67646001 None:intergenic
GACATTCCTATTGGTCTAGT+TGG 0.348285 4_1:-67646643 Msa0566530:CDS
CGGTGGTTTGTGCGAATTCA+AGG 0.351580 4_1:-67647270 Msa0566530:CDS
CACAATATGAACCCTGACTA+TGG 0.355787 4_1:-67646952 Msa0566530:CDS
TAAATTATGGGGAGTTCCTT+TGG 0.356075 4_1:-67645999 Msa0566530:CDS
GCTAAGTACATCGTTTCATT+AGG 0.362872 4_1:-67646493 Msa0566530:CDS
ACTAGAGCTCCAATAGCAAT+AGG 0.367625 4_1:+67646919 None:intergenic
TTGATTATTGGTTCTTCAAT+TGG 0.371036 4_1:-67646142 Msa0566530:CDS
ATATTCAAGGAGGATGTTTC+CGG 0.371568 4_1:+67647065 None:intergenic
TCCGGAATATTTGTGCTTAC+CGG 0.375172 4_1:-67653299 Msa0566530:CDS
GCTGTGGAAATTCCGGTTGC+TGG 0.377288 4_1:-67653179 Msa0566530:intron
ATACAATCTTTGCTCCTTTG+TGG 0.380411 4_1:-67646072 Msa0566530:CDS
TTCCATTGCTTCTCAACCTC+CGG 0.382100 4_1:+67645788 None:intergenic
TAGTGCTGTTGGAATGGATT+GGG 0.389974 4_1:-67646515 Msa0566530:CDS
CACCAGCTCTGCGTGGTCAC+TGG 0.392261 4_1:+67653409 None:intergenic
GGCAAAGAAGCCTAAATTAT+GGG 0.393362 4_1:-67646011 Msa0566530:CDS
TCCGGTAAGCACAAATATTC+CGG 0.393998 4_1:+67653298 None:intergenic
GCTCTTGTTGATGAAAGAAC+TGG 0.394168 4_1:-67646370 Msa0566530:CDS
GGTTCGCAAGTACCGAATTC+GGG 0.395076 4_1:+67647216 None:intergenic
GGGTCAAGATGGCCATAGTC+AGG 0.395099 4_1:+67646940 None:intergenic
TGGTGGGACTTGATGTGGTT+TGG 0.401009 4_1:-67653341 Msa0566530:CDS
TCAAGTGGGGTAACTACAAA+AGG 0.402045 4_1:-67646196 Msa0566530:CDS
GAGGTGGTTGACGGCGGCGG+AGG 0.404581 4_1:-67653563 Msa0566530:CDS
GCATGGAATGGTCAGTTCTT+CGG 0.404608 4_1:-67646740 Msa0566530:CDS
AGAGTTTGCTGTGGAAATTC+CGG 0.413761 4_1:-67653186 Msa0566530:CDS
ATTATCTTCATAGTAATTGC+TGG 0.415527 4_1:-67646814 Msa0566530:CDS
TTTGGTATCGGCGCTGTTGT+CGG 0.416973 4_1:-67653323 Msa0566530:CDS
AATTTAGGCTTCTTTGCCAT+TGG 0.418140 4_1:+67646016 None:intergenic
GGATAATAAGTACAGGAGTT+GGG 0.418671 4_1:+67652110 None:intergenic
TGTTTCTTTAATTTCGGTTG+TGG 0.421372 4_1:-67645649 Msa0566530:three_prime_UTR
TAACCATGCTTTGGTACTCT+TGG 0.425789 4_1:-67647295 Msa0566530:CDS
ATGCTTTGGTACTCTTGGTT+CGG 0.426079 4_1:-67647290 Msa0566530:CDS
GGCTAAGGAGCATGCAGGTC+CGG 0.426445 4_1:-67653270 Msa0566530:CDS
ATTGATCCAACTAGACCAAT+AGG 0.431013 4_1:+67646637 None:intergenic
TTCACTCCTTTCGGGTTGCA+TGG 0.432881 4_1:-67646757 Msa0566530:CDS
CCTTTGTGGTTTATAGGGAC+TGG 0.440792 4_1:-67646058 Msa0566530:CDS
TTAGTGCTGTTGGAATGGAT+TGG 0.443178 4_1:-67646516 Msa0566530:CDS
ATCGGCGCTGTTGTCGGCTC+CGG 0.443812 4_1:-67653317 Msa0566530:CDS
GACTTGATGTGGTTTGGTAT+CGG 0.444489 4_1:-67653335 Msa0566530:CDS
CAACTCTTAAACGACTCCTC+CGG 0.455729 4_1:+67653497 None:intergenic
GGGATAATAAGTACAGGAGT+TGG 0.456694 4_1:+67652109 None:intergenic
GGAAACACCTCTCCGGTTGA+AGG 0.459143 4_1:-67653450 Msa0566530:CDS
ACTACTATACGAAAATCATC+AGG 0.459755 4_1:+67646976 None:intergenic
GTGTTGTCGTTTGTCATCTC+CGG 0.461483 4_1:-67653242 Msa0566530:CDS
TCCTTTCGGGTTGCATGGAA+TGG 0.461688 4_1:-67646752 Msa0566530:CDS
CGGAGGAGTCGTTTAAGAGT+TGG 0.461779 4_1:-67653496 Msa0566530:CDS
ATAAGGTTTACGATTTGGAC+AGG 0.465281 4_1:-67645905 Msa0566530:CDS
GCAACTGAGAAAGGAGCATC+AGG 0.468881 4_1:+67646541 None:intergenic
GGAGAGGTGGTTGACGGCGG+CGG 0.471520 4_1:-67653566 Msa0566530:CDS
CGCATTATGTGTGGAGAAGT+GGG 0.472231 4_1:-67652159 Msa0566530:CDS
ATTGAGATCGTAGCATTCAT+AGG 0.474323 4_1:+67646343 None:intergenic
CCTGGTAGAGACATTCCTAT+TGG 0.474972 4_1:-67646652 Msa0566530:CDS
GCACTAAAAGCAACTGAGAA+AGG 0.478246 4_1:+67646532 None:intergenic
GCGGTTGGAGAGGTGGTTGA+CGG 0.480185 4_1:-67653572 Msa0566530:CDS
TCAACAAACGATCCTTCAAC+CGG 0.481067 4_1:+67653438 None:intergenic
GTTGAAGATGGAAGAGCCTT+TGG 0.481809 4_1:+67646867 None:intergenic
AGATGAAGAAGACACTGAAT+TGG 0.481831 4_1:-67653361 Msa0566530:CDS
AGGAGTTGGGGTTCGAATCT+CGG 0.484486 4_1:+67652123 None:intergenic
TAAGAGAAAGTACCAGCAAC+CGG 0.485484 4_1:+67653167 None:intergenic
GATGTTTCCGGCAGCTATGA+AGG 0.485872 4_1:+67647077 None:intergenic
ACATAGCAGTGGTTCTGATC+CGG 0.487510 4_1:-67645807 Msa0566530:CDS
ATCCTCCTTGAATATGTCAT+AGG 0.488387 4_1:-67647057 Msa0566530:CDS
AACTCTTAAACGACTCCTCC+GGG 0.489247 4_1:+67653498 None:intergenic
AAGGAATATGTTAATAGCAA+TGG 0.490509 4_1:+67645955 None:intergenic
AGTAGTGAGCATAATTGGAT+TGG 0.492532 4_1:-67646097 Msa0566530:CDS
ACGCCGCGGTAGCTCGATCA+TGG 0.494424 4_1:-67647032 Msa0566530:CDS
AAACTACGGAAAATCTATCA+TGG 0.496080 4_1:-67653471 Msa0566530:CDS
CCAATAGGAATGTCTCTACC+AGG 0.501633 4_1:+67646652 None:intergenic
TAAGGAGATATTATTCAAGT+GGG 0.502977 4_1:-67646210 Msa0566530:CDS
AATCAGCGGTAACCATGCTT+TGG 0.512668 4_1:-67647304 Msa0566530:intron
GATTTGGACAGGGTTTCTCT+TGG 0.516461 4_1:-67645894 Msa0566530:CDS
CTAGAGCTCCAATAGCAATA+GGG 0.517338 4_1:+67646920 None:intergenic
ATCCAGTGACCACGCAGAGC+TGG 0.517712 4_1:-67653411 Msa0566530:CDS
CTTTGGTACTCTTGGTTCGG+TGG 0.519001 4_1:-67647287 Msa0566530:CDS
GCTTACTTGAGAGTAGAAAT+GGG 0.528942 4_1:-67647111 Msa0566530:CDS
TTTGTTGCCTTCATAGCTGC+CGG 0.530560 4_1:-67647084 Msa0566530:CDS
CTTGCAGTTTACAGCACCAA+AGG 0.534562 4_1:-67646883 Msa0566530:CDS
ACGCATTATGTGTGGAGAAG+TGG 0.537291 4_1:-67652160 Msa0566530:CDS
ATAAAGTAGAAATCGACAAA+AGG 0.538029 4_1:+67646266 None:intergenic
CTATCATGGAAACACCTCTC+CGG 0.545103 4_1:-67653457 Msa0566530:CDS
TGTGGCTATGTAGTTGAAGA+TGG 0.545536 4_1:+67646855 None:intergenic
CGTTGCCTATGACATATTCA+AGG 0.547193 4_1:+67647052 None:intergenic
CAGGAACATGGCGGTTGGAG+AGG 0.548690 4_1:-67653582 None:intergenic
ACAAACGACAACACAACTGC+CGG 0.550560 4_1:+67653251 None:intergenic
TGATAACAAAGCAGATATAC+CGG 0.555679 4_1:+67653223 None:intergenic
TTAATAGCAATGGATAAAGA+AGG 0.556623 4_1:+67645965 None:intergenic
CAGTGACCACGCAGAGCTGG+TGG 0.558685 4_1:-67653408 Msa0566530:CDS
ATCCGGAGGTTGAGAAGCAA+TGG 0.560522 4_1:-67645790 Msa0566530:CDS
GTAAACTGCAAGGGCTGTGA+TGG 0.563586 4_1:+67646894 None:intergenic
CATAGTCAGGGTTCATATTG+TGG 0.563878 4_1:+67646953 None:intergenic
TGAAGAAGACACTGAATTGG+TGG 0.564541 4_1:-67653358 Msa0566530:CDS
CTTTGGTGCTGTAAACTGCA+AGG 0.567605 4_1:+67646884 None:intergenic
GGTGGTTTGTGCGAATTCAA+GGG 0.567779 4_1:-67647269 Msa0566530:CDS
GAAAACAGGAACATGGCGGT+TGG 0.569132 4_1:-67653587 None:intergenic
CAAGTGGGGTAACTACAAAA+GGG 0.569446 4_1:-67646195 Msa0566530:CDS
ATTTGTGCTTACCGGACTTG+AGG 0.572133 4_1:-67653291 Msa0566530:CDS
GATAATAAGTACAGGAGTTG+GGG 0.573230 4_1:+67652111 None:intergenic
CAATAGCAATAGGGTCAAGA+TGG 0.574940 4_1:+67646929 None:intergenic
GCTTACCGGACTTGAGGCTA+AGG 0.575661 4_1:-67653285 Msa0566530:CDS
GTAAGGAGATATTATTCAAG+TGG 0.577397 4_1:-67646211 Msa0566530:CDS
GAACATGGCGGTTGGAGAGG+TGG 0.581100 4_1:-67653579 None:intergenic
TGAATTGGTGGGACTTGATG+TGG 0.581666 4_1:-67653346 Msa0566530:CDS
GTTAGCTAGAATACTAAGAT+CGG 0.584642 4_1:+67646288 None:intergenic
GTGGTTTGTGCGAATTCAAG+GGG 0.589641 4_1:-67647268 Msa0566530:CDS
GTTTCATTAGGTGCTTTGAA+AGG 0.590596 4_1:-67646481 Msa0566530:CDS
GCAGAGGGTGGCAAAATAGG+AGG 0.598124 4_1:+67647008 None:intergenic
TGAGAAGCAATGGAACAAGA+TGG 0.601081 4_1:-67645780 Msa0566530:CDS
GTACTCACATGATGCCACCT+TGG 0.601374 4_1:-67646396 Msa0566530:CDS
ATGCTCCTTAGCCTCAAGTC+CGG 0.602400 4_1:+67653280 None:intergenic
CTTGAGGCTAAGGAGCATGC+AGG 0.604195 4_1:-67653275 Msa0566530:CDS
GAAGGTAGCCAAGGAACCAA+AGG 0.606519 4_1:+67645983 None:intergenic
GGCGGAGGAGTACGTAGAAG+AGG 0.614194 4_1:-67653548 Msa0566530:CDS
ATGGATAAAGAAGGTAGCCA+AGG 0.614956 4_1:+67645974 None:intergenic
GTGGAGATTAAGGCTAGGAG+TGG 0.614966 4_1:-67653389 Msa0566530:CDS
TAAGGTTTACGATTTGGACA+GGG 0.615168 4_1:-67645904 Msa0566530:CDS
ACCATTCCATGCAACCCGAA+AGG 0.616795 4_1:+67646751 None:intergenic
TTTGGTGCTGTAAACTGCAA+GGG 0.618827 4_1:+67646885 None:intergenic
GGTCAAGATGGCCATAGTCA+GGG 0.621031 4_1:+67646941 None:intergenic
GATAAGAGTAAACATAGCAG+TGG 0.622480 4_1:-67645818 Msa0566530:CDS
GAAGAAGACACTGAATTGGT+GGG 0.623639 4_1:-67653357 Msa0566530:CDS
GTTGGAGAGGTGGTTGACGG+CGG 0.625310 4_1:-67653569 Msa0566530:CDS
AGCTGGTGGAGATTAAGGCT+AGG 0.626254 4_1:-67653394 Msa0566530:CDS
AGATTCACACGCATTATGTG+TGG 0.626867 4_1:-67652168 Msa0566530:CDS
AATATAAGCAAAGAAAAGAA+CGG 0.627891 4_1:+67646717 None:intergenic
ATCAAGTGAGTCTCATTGTG+TGG 0.628463 4_1:-67646171 Msa0566530:CDS
CAATGGAACAAGATGGAGCA+AGG 0.635963 4_1:-67645773 Msa0566530:CDS
GCATTATGTGTGGAGAAGTG+GGG 0.638619 4_1:-67652158 Msa0566530:CDS
TGCTTTGAAAGGAATGACAA+CGG 0.638848 4_1:-67646470 Msa0566530:CDS
GCAAAGAAGCCTAAATTATG+GGG 0.643860 4_1:-67646010 Msa0566530:CDS
TAGCAGTGGTTCTGATCCGG+AGG 0.648811 4_1:-67645804 Msa0566530:CDS
CATAGCCACAATGTTCCACA+TGG 0.652539 4_1:-67646842 Msa0566530:CDS
TGGAGATTAAGGCTAGGAGT+GGG 0.659365 4_1:-67653388 Msa0566530:CDS
TTGTTATACAGAGTTTGCTG+TGG 0.663078 4_1:-67653195 Msa0566530:CDS
CTACTATACGAAAATCATCA+GGG 0.667731 4_1:+67646977 None:intergenic
AAGGAGATATTATTCAAGTG+GGG 0.676082 4_1:-67646209 Msa0566530:CDS
GTTACATGCTTCATATGACA+CGG 0.676963 4_1:-67645852 Msa0566530:CDS
GAACCAAGAGTACCAAAGCA+TGG 0.679732 4_1:+67647292 None:intergenic
GGTCCATGATCGAGCTACCG+CGG 0.680216 4_1:+67647029 None:intergenic
GACAGCCATGTGGAACATTG+TGG 0.684798 4_1:+67646837 None:intergenic
CAATAGGAATGTCTCTACCA+GGG 0.688021 4_1:+67646653 None:intergenic
TAATCTCCACCAGCTCTGCG+TGG 0.688075 4_1:+67653402 None:intergenic
AAACGATCCTTCAACCGGAG+AGG 0.694839 4_1:+67653443 None:intergenic
TGCGTGTGAATCTAGCCACT+AGG 0.701569 4_1:+67652178 None:intergenic
CATTATGTGTGGAGAAGTGG+GGG 0.701659 4_1:-67652157 Msa0566530:CDS
TGAAGATAATGACAGCCATG+TGG 0.711409 4_1:+67646827 None:intergenic
CCAGTCCCTATAAACCACAA+AGG 0.715990 4_1:+67646058 None:intergenic
TGCCTATGACATATTCAAGG+AGG 0.723417 4_1:+67647055 None:intergenic
TCAACAAGAGCAAACCAAGG+TGG 0.728106 4_1:+67646382 None:intergenic
TCATCAACAAGAGCAAACCA+AGG 0.735762 4_1:+67646379 None:intergenic
ATATGTCATAGGCAACGCCG+CGG 0.783643 4_1:-67647046 Msa0566530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTTCTAAATATTT+TGG - chr4_1:67646435-67646454 Msa0566530:CDS 10.0%
!!! TGTTGTAAAATTATAAATTT+TGG + chr4_1:67646669-67646688 None:intergenic 10.0%
!! ATAAGAAACATATTAAAAAA+CGG - chr4_1:67648508-67648527 Msa0566530:intron 10.0%
!!! AAAGAATAATTACTAATTTT+AGG + chr4_1:67648572-67648591 None:intergenic 10.0%
!! CTTAAATATTTATTAAAAAG+AGG + chr4_1:67649518-67649537 None:intergenic 10.0%
!! TATTATGAATGAAATAATAA+AGG - chr4_1:67651000-67651019 Msa0566530:intron 10.0%
!!! ATAATTTTTGTTATTTTTGA+AGG + chr4_1:67651262-67651281 None:intergenic 10.0%
!!! ATAATTATTTTTTTTTGAAG+AGG - chr4_1:67651347-67651366 Msa0566530:intron 10.0%
!! GAATATAAAAATACAACAAA+AGG - chr4_1:67646193-67646212 Msa0566530:CDS 15.0%
!!! AAGTTTACTAAATTTTATTC+CGG - chr4_1:67646313-67646332 Msa0566530:CDS 15.0%
!!! AACTATAAAAATATGGATTA+AGG + chr4_1:67646389-67646408 None:intergenic 15.0%
!!! AAAACATTAGTGAAATTTTA+TGG + chr4_1:67647612-67647631 None:intergenic 15.0%
!! ATACACATAAAATATATGAT+GGG - chr4_1:67648288-67648307 Msa0566530:intron 15.0%
!!! ATCAAATTGCTTTTTTTAAT+GGG + chr4_1:67648703-67648722 None:intergenic 15.0%
!! ATTAAAAAAAGCAATTTGAT+GGG - chr4_1:67648703-67648722 Msa0566530:intron 15.0%
!! AAAACATAAAATTGAAAATG+TGG - chr4_1:67649614-67649633 Msa0566530:intron 15.0%
!!! AATTTAAATTGTTTTTTGAG+AGG + chr4_1:67649708-67649727 None:intergenic 15.0%
!!! TTTCTTTTAAAAAATGAAGA+GGG + chr4_1:67650129-67650148 None:intergenic 15.0%
!!! ATTTCTTTTAAAAAATGAAG+AGG + chr4_1:67650130-67650149 None:intergenic 15.0%
!! AATAATAGTCTACTATAAAA+AGG + chr4_1:67650256-67650275 None:intergenic 15.0%
!!! TTTTTATAGTAGACTATTAT+TGG - chr4_1:67650255-67650274 Msa0566530:intron 15.0%
!! TTGATAAAAAATCGTATATA+AGG - chr4_1:67653279-67653298 Msa0566530:CDS 15.0%
!! ATACATATCAAGTTATTAAT+TGG + chr4_1:67653489-67653508 None:intergenic 15.0%
!!! GAAATTTGTTTCTTTAATTT+CGG - chr4_1:67653546-67653565 Msa0566530:CDS 15.0%
!!! ATCAAAACAACTAAACTTTT+CGG - chr4_1:67646226-67646245 Msa0566530:CDS 20.0%
!!! TCCATATTTTTATAGTTCAT+AGG - chr4_1:67646392-67646411 Msa0566530:CDS 20.0%
!! TCCTATGAACTATAAAAATA+TGG + chr4_1:67646396-67646415 None:intergenic 20.0%
!! AGTTTACAAAATTTATTGCT+AGG + chr4_1:67646499-67646518 None:intergenic 20.0%
!!! TTAATTGTGTTGGTTTAATA+GGG + chr4_1:67646535-67646554 None:intergenic 20.0%
!!! ATTAATTGTGTTGGTTTAAT+AGG + chr4_1:67646536-67646555 None:intergenic 20.0%
!!! TTTATTTTGAGTGGATATTT+GGG + chr4_1:67646643-67646662 None:intergenic 20.0%
!!! TAATTTTACAACATTGTAAG+TGG - chr4_1:67646676-67646695 Msa0566530:CDS 20.0%
!!! TTTTAATATTCCATCTAGAT+TGG + chr4_1:67646939-67646958 None:intergenic 20.0%
!! CAAAAAAAAACTACATTTGA+TGG + chr4_1:67646995-67647014 None:intergenic 20.0%
!!! AAATGTAGTTTTTTTTTGTC+AGG - chr4_1:67646997-67647016 Msa0566530:CDS 20.0%
!! ATTCTTATAAAAGACTAATG+TGG - chr4_1:67647209-67647228 Msa0566530:intron 20.0%
!!! TTTTTCTCAGCAATTAAATT+AGG - chr4_1:67647303-67647322 Msa0566530:intron 20.0%
!!! ATTTTTAAAAGTAGAGAAGT+GGG + chr4_1:67647399-67647418 None:intergenic 20.0%
!! ACTTGTAAAAAAAATGAAGT+TGG + chr4_1:67647502-67647521 None:intergenic 20.0%
!!! TGTAGCTATCTTTTTTATTA+TGG - chr4_1:67647631-67647650 Msa0566530:intron 20.0%
!!! TTTTTTTGACAAGATTTTCT+TGG - chr4_1:67647973-67647992 Msa0566530:intron 20.0%
!! CATACACATAAAATATATGA+TGG - chr4_1:67648287-67648306 Msa0566530:intron 20.0%
!!! CATCAAATTGCTTTTTTTAA+TGG + chr4_1:67648704-67648723 None:intergenic 20.0%
!! CATTAAAAAAAGCAATTTGA+TGG - chr4_1:67648702-67648721 Msa0566530:intron 20.0%
!! TTAAAAAAAGCAATTTGATG+GGG - chr4_1:67648704-67648723 Msa0566530:intron 20.0%
!!! ATCAAATTGCTTTTTTTAAC+GGG + chr4_1:67648847-67648866 None:intergenic 20.0%
!!! CATCAAATTGCTTTTTTTAA+CGG + chr4_1:67648704-67648723 None:intergenic 20.0%
!! GTTAAAAAAAGCAATTTGAT+GGG - chr4_1:67648847-67648866 Msa0566530:intron 20.0%
!! TTAAAAAAAGCAATTTGATG+GGG - chr4_1:67648704-67648723 Msa0566530:intron 20.0%
!! AAAACACTGTTACAAAAATT+AGG - chr4_1:67649104-67649123 Msa0566530:intron 20.0%
!! TAAAACTGAAATATTAGTTG+TGG + chr4_1:67649446-67649465 None:intergenic 20.0%
!!! TTGTTTTCAAAAACTGTTTT+TGG + chr4_1:67649801-67649820 None:intergenic 20.0%
!! AGTTTAACTATATCAAGTTT+AGG - chr4_1:67650282-67650301 Msa0566530:intron 20.0%
!! GTTTAACTATATCAAGTTTA+GGG - chr4_1:67650283-67650302 Msa0566530:intron 20.0%
!!! AATAGAAGTAGAAGTATAAA+TGG + chr4_1:67650911-67650930 None:intergenic 20.0%
!! GTCAAAAAGTTGTTAAAAAA+TGG + chr4_1:67651045-67651064 None:intergenic 20.0%
!! TACTCATAATAAATTGCTAA+AGG - chr4_1:67651219-67651238 Msa0566530:intron 20.0%
!!! TTGGGATTATTTTTTAGTAT+TGG + chr4_1:67651553-67651572 None:intergenic 20.0%
!! AATATAAGCAAAGAAAAGAA+CGG + chr4_1:67652487-67652506 None:intergenic 20.0%
!!! TTTATTTATCTTTTCACTTG+TGG - chr4_1:67652953-67652972 Msa0566530:intron 20.0%
!! ACTTGATATGTATATGTTAA+AGG - chr4_1:67653496-67653515 Msa0566530:CDS 20.0%
! TTTAAGAGTTGGAAAAACTA+CGG - chr4_1:67645716-67645735 Msa0566530:exon 25.0%
!! TGACAATAAGAAACTTTTAC+CGG - chr4_1:67646133-67646152 Msa0566530:CDS 25.0%
!! CTATAGAAACATTTTATAGC+CGG + chr4_1:67646335-67646354 None:intergenic 25.0%
! ACAGAAATCATTAATTGTGT+TGG + chr4_1:67646545-67646564 None:intergenic 25.0%
!!! CTTTATTTTGAGTGGATATT+TGG + chr4_1:67646644-67646663 None:intergenic 25.0%
!!! GACAATTATTTTAAGACGAA+GGG + chr4_1:67646782-67646801 None:intergenic 25.0%
!!! AGACAATTATTTTAAGACGA+AGG + chr4_1:67646783-67646802 None:intergenic 25.0%
!!! TTTTAAAGGAATTCCACATT+TGG + chr4_1:67647252-67647271 None:intergenic 25.0%
! TACCAAATGAATTAAGCTTA+GGG + chr4_1:67647331-67647350 None:intergenic 25.0%
!!! TTTTTAAAAGTAGAGAAGTG+GGG + chr4_1:67647398-67647417 None:intergenic 25.0%
!!! CATTTTTAAAAGTAGAGAAG+TGG + chr4_1:67647400-67647419 None:intergenic 25.0%
! CAACAAATTCTTAATAACTC+CGG - chr4_1:67647526-67647545 Msa0566530:intron 25.0%
! AGATGAAAGATTAAAAACGT+AGG + chr4_1:67647561-67647580 None:intergenic 25.0%
!! AATCTTTCATCTATTTGTTG+TGG - chr4_1:67647569-67647588 Msa0566530:intron 25.0%
!!! ATCTTTCATCTATTTGTTGT+GGG - chr4_1:67647570-67647589 Msa0566530:intron 25.0%
!!! CAGTCTTTAATTTTACAAGT+CGG + chr4_1:67647682-67647701 None:intergenic 25.0%
!! ACTATTTTGCCAATTTTTCT+TGG + chr4_1:67647749-67647768 None:intergenic 25.0%
!!! CTTTAAGAGTATCTTTACAT+TGG - chr4_1:67647790-67647809 Msa0566530:intron 25.0%
! GAAGTTATTATTTGTTTGTG+TGG + chr4_1:67647873-67647892 None:intergenic 25.0%
!! TTCTTATTTGTTGAATACGT+GGG + chr4_1:67648261-67648280 None:intergenic 25.0%
!! ATTCTTATTTGTTGAATACG+TGG + chr4_1:67648262-67648281 None:intergenic 25.0%
!!! ATATTTTGGCTTTGTTTACT+CGG + chr4_1:67648433-67648452 None:intergenic 25.0%
! TAAAAAAAGCAATTTGATGG+GGG - chr4_1:67648705-67648724 Msa0566530:intron 25.0%
! CGTTAAAAAAAGCAATTTGA+TGG - chr4_1:67648846-67648865 Msa0566530:intron 25.0%
! TAAAAAAAGCAATTTGATGG+GGG - chr4_1:67648705-67648724 Msa0566530:intron 25.0%
! ACAACATCAAAATAGTGAAT+CGG - chr4_1:67649128-67649147 Msa0566530:intron 25.0%
!!! CAGTTGATTTCTAAAGTTTA+AGG + chr4_1:67649324-67649343 None:intergenic 25.0%
! TGAAAGGAGATATTAAGAAA+GGG + chr4_1:67649419-67649438 None:intergenic 25.0%
! ATGAAAGGAGATATTAAGAA+AGG + chr4_1:67649420-67649439 None:intergenic 25.0%
! TATTAGTTGTGGTTAATGAA+AGG + chr4_1:67649435-67649454 None:intergenic 25.0%
! TGTCTGTATTATCTTTACTT+GGG + chr4_1:67649866-67649885 None:intergenic 25.0%
! TTGTCTGTATTATCTTTACT+TGG + chr4_1:67649867-67649886 None:intergenic 25.0%
!! ATTTGAACCTATTGCAATTT+TGG + chr4_1:67649988-67650007 None:intergenic 25.0%
! CTAAATGTTCAAATAGTTTG+AGG - chr4_1:67650079-67650098 Msa0566530:intron 25.0%
!! TCTAATGATAATGTAGCAAA+TGG - chr4_1:67650151-67650170 Msa0566530:intron 25.0%
! ACTGTCAAAGCTAATTAATT+TGG + chr4_1:67650181-67650200 None:intergenic 25.0%
! ATTGAACTATCATAAGGAAT+TGG - chr4_1:67650306-67650325 Msa0566530:intron 25.0%
!!! TCATAGTTTTGATGTTTATG+AGG - chr4_1:67650849-67650868 Msa0566530:intron 25.0%
!! AGTGATATTTGTACAACTTT+TGG + chr4_1:67651200-67651219 None:intergenic 25.0%
! ACTTAAAACGACAACTAAAA+AGG - chr4_1:67651307-67651326 Msa0566530:intron 25.0%
!!! TAGCAGTTTGATTTTGATAT+TGG - chr4_1:67651393-67651412 Msa0566530:intron 25.0%
!!! TCTTTATTTTTTCATGACGT+AGG + chr4_1:67651594-67651613 None:intergenic 25.0%
! ATAGCTATTTATTGCTACAA+TGG + chr4_1:67651784-67651803 None:intergenic 25.0%
! ATTGGTTGAAAAAAAAGGTT+TGG + chr4_1:67651880-67651899 None:intergenic 25.0%
! TACATAATTCGTGTAATCAA+TGG + chr4_1:67652024-67652043 None:intergenic 25.0%
! TTACACGAATTATGTAACTA+TGG - chr4_1:67652028-67652047 Msa0566530:intron 25.0%
! ATTATCTTCATAGTAATTGC+TGG - chr4_1:67652387-67652406 Msa0566530:intron 25.0%
!! GTTCTTTTCTTTGCTTATAT+TGG - chr4_1:67652486-67652505 Msa0566530:intron 25.0%
! ATAAAGTAGAAATCGACAAA+AGG + chr4_1:67652938-67652957 None:intergenic 25.0%
! TAAGGAGATATTATTCAAGT+GGG - chr4_1:67652991-67653010 Msa0566530:intron 25.0%
!!! TTGATTATTGGTTCTTCAAT+TGG - chr4_1:67653059-67653078 Msa0566530:intron 25.0%
! AATTGGAATTTCAGCTTATT+GGG - chr4_1:67653076-67653095 Msa0566530:intron 25.0%
! TTAATAGCAATGGATAAAGA+AGG + chr4_1:67653239-67653258 None:intergenic 25.0%
! AAGGAATATGTTAATAGCAA+TGG + chr4_1:67653249-67653268 None:intergenic 25.0%
!! TTTTATCAATAGTTCCAAGA+AGG + chr4_1:67653268-67653287 None:intergenic 25.0%
AAACTACGGAAAATCTATCA+TGG - chr4_1:67645730-67645749 Msa0566530:CDS 30.0%
TGATAACAAAGCAGATATAC+CGG + chr4_1:67645981-67646000 None:intergenic 30.0%
TTATATCTACTTCGAGTAAC+CGG + chr4_1:67646155-67646174 None:intergenic 30.0%
TTGCTAGGAATAACAATACT+TGG + chr4_1:67646484-67646503 None:intergenic 30.0%
!!! TTTTGGTGCTTTATTTTGAG+TGG + chr4_1:67646652-67646671 None:intergenic 30.0%
ATGTTTGTGCACGATATTTA+AGG + chr4_1:67646883-67646902 None:intergenic 30.0%
AAACGACTCTTATCTTAAGA+CGG - chr4_1:67646904-67646923 Msa0566530:CDS 30.0%
TTATCAGGGATAATAAGTAC+AGG + chr4_1:67647101-67647120 None:intergenic 30.0%
!! TGAGTTGATAATTCCAAATG+TGG - chr4_1:67647236-67647255 Msa0566530:CDS 30.0%
TTCCCTAAGCTTAATTCATT+TGG - chr4_1:67647326-67647345 Msa0566530:intron 30.0%
CTACCAAATGAATTAAGCTT+AGG + chr4_1:67647332-67647351 None:intergenic 30.0%
CGGAGTTATTAAGAATTTGT+TGG + chr4_1:67647528-67647547 None:intergenic 30.0%
! TAATTTTACAAGTCGGAGAA+AGG + chr4_1:67647675-67647694 None:intergenic 30.0%
! TATGACAACCTTGACAATTT+TGG + chr4_1:67647705-67647724 None:intergenic 30.0%
! GTACAATATTGACTGATGAA+TGG + chr4_1:67647851-67647870 None:intergenic 30.0%
ATACACGAGTTTGAAGAAAA+TGG - chr4_1:67648052-67648071 Msa0566530:intron 30.0%
TTCCTCTAATAGTAATAGAC+AGG - chr4_1:67648136-67648155 Msa0566530:intron 30.0%
GTGATTTAAAAAACATCGTG+AGG - chr4_1:67648334-67648353 Msa0566530:intron 30.0%
TAAAAAACATCGTGAGGAAA+AGG - chr4_1:67648340-67648359 Msa0566530:intron 30.0%
CATTAGAAGACAAATGCAAA+AGG - chr4_1:67648369-67648388 Msa0566530:intron 30.0%
AAAAAAAGCAATTTGATGGG+GGG - chr4_1:67648706-67648725 Msa0566530:intron 30.0%
AAAAAAAGCAATTTGATGGG+GGG - chr4_1:67648706-67648725 Msa0566530:intron 30.0%
!! AGTGTTTCTGAATTTTTCGT+TGG - chr4_1:67648877-67648896 Msa0566530:intron 30.0%
!!! ATCTTTTTGATGACGAAGAA+GGG - chr4_1:67649018-67649037 Msa0566530:intron 30.0%
!!! TCGGTTGTTGTTTGTTTTTT+GGG + chr4_1:67649050-67649069 None:intergenic 30.0%
!!! ATCGGTTGTTGTTTGTTTTT+TGG + chr4_1:67649051-67649070 None:intergenic 30.0%
! TAAAACGTTCCAGTGTTATT+AGG - chr4_1:67649242-67649261 Msa0566530:intron 30.0%
AACAAATGTCCTAATAACAC+TGG + chr4_1:67649254-67649273 None:intergenic 30.0%
! TTAGTCTTTAACAAACGTCA+AGG - chr4_1:67649380-67649399 Msa0566530:intron 30.0%
TCTGTATTATCTTTACTTGG+GGG + chr4_1:67649864-67649883 None:intergenic 30.0%
GTCTGTATTATCTTTACTTG+GGG + chr4_1:67649865-67649884 None:intergenic 30.0%
! TTAGTCTTTGGAAAAATTGC+CGG + chr4_1:67650042-67650061 None:intergenic 30.0%
GTTCAAATAGTTTGAGGATT+AGG - chr4_1:67650085-67650104 Msa0566530:intron 30.0%
! AGTTTGAGGATTAGGATTTT+TGG - chr4_1:67650093-67650112 Msa0566530:intron 30.0%
TTAGGGATTGAACTATCATA+AGG - chr4_1:67650300-67650319 Msa0566530:intron 30.0%
! AACATTTCACGTTGTTTCAA+TGG + chr4_1:67650337-67650356 None:intergenic 30.0%
GAAACAACGTGAAATGTTAA+AGG - chr4_1:67650339-67650358 Msa0566530:intron 30.0%
ACGTGAAATGTTAAAGGAAT+TGG - chr4_1:67650430-67650449 Msa0566530:intron 30.0%
! AACATTTCACGTTGTTTCAA+TGG + chr4_1:67650337-67650356 None:intergenic 30.0%
GAAACAACGTGAAATGTTAA+AGG - chr4_1:67650339-67650358 Msa0566530:intron 30.0%
ACGTGAAATGTTAAAGGAAT+TGG - chr4_1:67650430-67650449 Msa0566530:intron 30.0%
! AACATTTCACGTTGTTTCAA+TGG + chr4_1:67650337-67650356 None:intergenic 30.0%
AGAGAGAGAGAGAAAAAAAA+AGG + chr4_1:67651112-67651131 None:intergenic 30.0%
AATTGCGAATTATGTGACTA+TGG + chr4_1:67651429-67651448 None:intergenic 30.0%
AAAAATAATCCCAACACTGT+AGG - chr4_1:67651559-67651578 Msa0566530:intron 30.0%
! TCATTTTATCCTACAGTGTT+GGG + chr4_1:67651571-67651590 None:intergenic 30.0%
AAAAAACCATCAAAGTTGAC+AGG - chr4_1:67651614-67651633 Msa0566530:intron 30.0%
TCCTATTAAATCTTCGATGT+GGG + chr4_1:67651693-67651712 None:intergenic 30.0%
AATAGGACTATAGAAGAAAG+TGG - chr4_1:67651706-67651725 Msa0566530:intron 30.0%
CAAATGAATTGCATGTAGTA+TGG - chr4_1:67651743-67651762 Msa0566530:intron 30.0%
!!! CTTTTTTTTCAACCAATCAG+CGG - chr4_1:67651883-67651902 Msa0566530:intron 30.0%
CTACTATACGAAAATCATCA+GGG + chr4_1:67652227-67652246 None:intergenic 30.0%
ACTACTATACGAAAATCATC+AGG + chr4_1:67652228-67652247 None:intergenic 30.0%
! AGTGAAGTCATTGAAGTTTT+CGG + chr4_1:67652430-67652449 None:intergenic 30.0%
GTTAGCTAGAATACTAAGAT+CGG + chr4_1:67652916-67652935 None:intergenic 30.0%
GTAAGGAGATATTATTCAAG+TGG - chr4_1:67652990-67653009 Msa0566530:intron 30.0%
AAGGAGATATTATTCAAGTG+GGG - chr4_1:67652992-67653011 Msa0566530:intron 30.0%
CAATTGGAATTTCAGCTTAT+TGG - chr4_1:67653075-67653094 Msa0566530:intron 30.0%
CTAATAGTAGTGAGCATAAT+TGG - chr4_1:67653099-67653118 Msa0566530:intron 30.0%
GCTATTAACATATTCCTTCT+TGG - chr4_1:67653251-67653270 Msa0566530:CDS 30.0%
CGTATATAAGGTTTACGATT+TGG - chr4_1:67653291-67653310 Msa0566530:CDS 30.0%
! TTGGTATACTATGTGCTATT+AGG - chr4_1:67653326-67653345 Msa0566530:CDS 30.0%
! TGGTATACTATGTGCTATTA+GGG - chr4_1:67653327-67653346 Msa0566530:CDS 30.0%
! TGTTTCTTTAATTTCGGTTG+TGG - chr4_1:67653552-67653571 Msa0566530:CDS 30.0%
AGATGAAGAAGACACTGAAT+TGG - chr4_1:67645840-67645859 Msa0566530:CDS 35.0%
!! TTGTTATACAGAGTTTGCTG+TGG - chr4_1:67646006-67646025 Msa0566530:CDS 35.0%
!! ATGAGATAGAGAGAGTACTA+CGG - chr4_1:67646602-67646621 Msa0566530:CDS 35.0%
AAAGTCTTGGAGAAGTCAAA+AGG + chr4_1:67646738-67646757 None:intergenic 35.0%
GATAATAAGTACAGGAGTTG+GGG + chr4_1:67647093-67647112 None:intergenic 35.0%
GGATAATAAGTACAGGAGTT+GGG + chr4_1:67647094-67647113 None:intergenic 35.0%
!! AGCTCAGTTGATAGTTATCA+GGG + chr4_1:67647115-67647134 None:intergenic 35.0%
!! TAGCTCAGTTGATAGTTATC+AGG + chr4_1:67647116-67647135 None:intergenic 35.0%
TATCAACTGAGCTACACTTA+CGG - chr4_1:67647122-67647141 Msa0566530:CDS 35.0%
AAAGACTGCCAAAATTGTCA+AGG - chr4_1:67647694-67647713 Msa0566530:intron 35.0%
GATTCAGTGCCAAGAAAAAT+TGG - chr4_1:67647737-67647756 Msa0566530:intron 35.0%
! CAATATTGACTGATGAATGG+AGG + chr4_1:67647848-67647867 None:intergenic 35.0%
!!! TTCTCACGCTAGATTTTTTC+TGG - chr4_1:67647890-67647909 Msa0566530:intron 35.0%
TTGACAAAGAATGACTATGG+GGG + chr4_1:67648164-67648183 None:intergenic 35.0%
GTTGACAAAGAATGACTATG+GGG + chr4_1:67648165-67648184 None:intergenic 35.0%
GGTTGACAAAGAATGACTAT+GGG + chr4_1:67648166-67648185 None:intergenic 35.0%
AGGTTGACAAAGAATGACTA+TGG + chr4_1:67648167-67648186 None:intergenic 35.0%
! ATCATCTTTGTTGTGTGAAC+AGG + chr4_1:67648187-67648206 None:intergenic 35.0%
AAAAGTTAACGAGTGTCTTC+GGG + chr4_1:67648680-67648699 None:intergenic 35.0%
GAAAAGTTAACGAGTGTCTT+CGG + chr4_1:67648681-67648700 None:intergenic 35.0%
!! AGTGTTTCTGAATTTTTCGC+TGG - chr4_1:67648732-67648751 Msa0566530:intron 35.0%
AAAAAAGCAATTTGATGGGG+GGG - chr4_1:67648707-67648726 Msa0566530:intron 35.0%
!!! CATCTTTTTGATGACGAAGA+AGG - chr4_1:67649017-67649036 Msa0566530:intron 35.0%
!!! TCTTTTTGATGACGAAGAAG+GGG - chr4_1:67649019-67649038 Msa0566530:intron 35.0%
!!! GGTTGTTGTTTGTTTTTTGG+GGG + chr4_1:67649048-67649067 None:intergenic 35.0%
!!! CGGTTGTTGTTTGTTTTTTG+GGG + chr4_1:67649049-67649068 None:intergenic 35.0%
TGCAGATGCTTTAGCAAAAT+GGG + chr4_1:67649171-67649190 None:intergenic 35.0%
TTGCAGATGCTTTAGCAAAA+TGG + chr4_1:67649172-67649191 None:intergenic 35.0%
! CTGCAACTTTATTTGCTTCT+CGG - chr4_1:67649186-67649205 Msa0566530:intron 35.0%
!! CACTGGAACGTTTTATTAGA+TGG + chr4_1:67649237-67649256 None:intergenic 35.0%
ATATGAGCACCAGCTAAATA+TGG - chr4_1:67649834-67649853 Msa0566530:intron 35.0%
CTGTATTATCTTTACTTGGG+GGG + chr4_1:67649863-67649882 None:intergenic 35.0%
AACGTCACCAAAATTGCAAT+AGG - chr4_1:67649978-67649997 Msa0566530:intron 35.0%
TTGCAATAGGGTTAATTAGC+TGG + chr4_1:67650206-67650225 None:intergenic 35.0%
!! AGAAGAGCACTATTGCAATA+GGG + chr4_1:67650218-67650237 None:intergenic 35.0%
!! AAGAAGAGCACTATTGCAAT+AGG + chr4_1:67650219-67650238 None:intergenic 35.0%
! GTTTCAATGGTGCCAATTTA+GGG + chr4_1:67650409-67650428 None:intergenic 35.0%
! TGTTTCAATGGTGCCAATTT+AGG + chr4_1:67650410-67650429 None:intergenic 35.0%
! GTTTCAATGGTGCCAATTTA+GGG + chr4_1:67650409-67650428 None:intergenic 35.0%
! TGTTTCAATGGTGCCAATTT+AGG + chr4_1:67650410-67650429 None:intergenic 35.0%
! GTTTCAATGGTGCCAATTTA+GGG + chr4_1:67650409-67650428 None:intergenic 35.0%
! TGTTTCAATGGTGCCAATTT+AGG + chr4_1:67650410-67650429 None:intergenic 35.0%
CTATGATAGAAAACCCACTT+GGG + chr4_1:67650835-67650854 None:intergenic 35.0%
ACTATGATAGAAAACCCACT+TGG + chr4_1:67650836-67650855 None:intergenic 35.0%
ACATAATTCGCAATTCGTGT+CGG - chr4_1:67651434-67651453 Msa0566530:intron 35.0%
TGTGAAGAATTCGATACGTT+TGG - chr4_1:67651492-67651511 Msa0566530:intron 35.0%
GTGAAGAATTCGATACGTTT+GGG - chr4_1:67651493-67651512 Msa0566530:intron 35.0%
!! GTCATTTTATCCTACAGTGT+TGG + chr4_1:67651572-67651591 None:intergenic 35.0%
! GTTGTGCATTTTATGCTACT+AGG + chr4_1:67651642-67651661 None:intergenic 35.0%
TCCCACATCGAAGATTTAAT+AGG - chr4_1:67651689-67651708 Msa0566530:intron 35.0%
GTCCTATTAAATCTTCGATG+TGG + chr4_1:67651694-67651713 None:intergenic 35.0%
CTACATGCAATTCATTTGCT+TGG + chr4_1:67651741-67651760 None:intergenic 35.0%
TTGCATGTAGTATGGATTTG+AGG - chr4_1:67651751-67651770 Msa0566530:intron 35.0%
! CGCTGATTGGTTGAAAAAAA+AGG + chr4_1:67651885-67651904 None:intergenic 35.0%
ATCAATGGAGAATTGCGAAT+TGG + chr4_1:67652009-67652028 None:intergenic 35.0%
! CACTTTTCACTCTCTTATTC+AGG - chr4_1:67652057-67652076 Msa0566530:intron 35.0%
! TTTTCACTCTCTTATTCAGG+TGG - chr4_1:67652060-67652079 Msa0566530:intron 35.0%
TGCTTACTTGAGAGTAGAAA+TGG - chr4_1:67652089-67652108 Msa0566530:intron 35.0%
GCTTACTTGAGAGTAGAAAT+GGG - chr4_1:67652090-67652109 Msa0566530:intron 35.0%
ATATTCAAGGAGGATGTTTC+CGG + chr4_1:67652139-67652158 None:intergenic 35.0%
ATCCTCCTTGAATATGTCAT+AGG - chr4_1:67652144-67652163 Msa0566530:CDS 35.0%
! GTCATTGAAGTTTTCGGTTT+TGG + chr4_1:67652424-67652443 None:intergenic 35.0%
TTCAATGACTTCACTCCTTT+CGG - chr4_1:67652435-67652454 Msa0566530:intron 35.0%
CTTTGATGCAGTTTCAACTA+TGG - chr4_1:67652509-67652528 Msa0566530:intron 35.0%
ATTGATCCAACTAGACCAAT+AGG + chr4_1:67652567-67652586 None:intergenic 35.0%
GCTAAGTACATCGTTTCATT+AGG - chr4_1:67652708-67652727 Msa0566530:intron 35.0%
! GTTTCATTAGGTGCTTTGAA+AGG - chr4_1:67652720-67652739 Msa0566530:intron 35.0%
!! TGCTTTGAAAGGAATGACAA+CGG - chr4_1:67652731-67652750 Msa0566530:intron 35.0%
ATTGAGATCGTAGCATTCAT+AGG + chr4_1:67652861-67652880 None:intergenic 35.0%
! TGGCATTAGCACTTTTAGTA+AGG - chr4_1:67652973-67652992 Msa0566530:intron 35.0%
AGTAGTGAGCATAATTGGAT+TGG - chr4_1:67653104-67653123 Msa0566530:intron 35.0%
ATACAATCTTTGCTCCTTTG+TGG - chr4_1:67653129-67653148 Msa0566530:intron 35.0%
TTTGCTCCTTTGTGGTTTAT+AGG - chr4_1:67653137-67653156 Msa0566530:intron 35.0%
TTGCTCCTTTGTGGTTTATA+GGG - chr4_1:67653138-67653157 Msa0566530:intron 35.0%
!!! TCTTTGGCTTTTTGTTCCAA+TGG - chr4_1:67653169-67653188 Msa0566530:intron 35.0%
AATTTAGGCTTCTTTGCCAT+TGG + chr4_1:67653188-67653207 None:intergenic 35.0%
TGGCAAAGAAGCCTAAATTA+TGG - chr4_1:67653189-67653208 Msa0566530:CDS 35.0%
GGCAAAGAAGCCTAAATTAT+GGG - chr4_1:67653190-67653209 Msa0566530:CDS 35.0%
GCAAAGAAGCCTAAATTATG+GGG - chr4_1:67653191-67653210 Msa0566530:CDS 35.0%
AAAGGAACTCCCCATAATTT+AGG + chr4_1:67653203-67653222 None:intergenic 35.0%
TAAATTATGGGGAGTTCCTT+TGG - chr4_1:67653202-67653221 Msa0566530:CDS 35.0%
! ATAAGGTTTACGATTTGGAC+AGG - chr4_1:67653296-67653315 Msa0566530:CDS 35.0%
! TAAGGTTTACGATTTGGACA+GGG - chr4_1:67653297-67653316 Msa0566530:CDS 35.0%
GTTACATGCTTCATATGACA+CGG - chr4_1:67653349-67653368 Msa0566530:CDS 35.0%
GATAAGAGTAAACATAGCAG+TGG - chr4_1:67653383-67653402 Msa0566530:CDS 35.0%
TCAGAAAAACGACTTCTTCC+CGG - chr4_1:67645685-67645704 Msa0566530:three_prime_UTR 40.0%
TCAACAAACGATCCTTCAAC+CGG + chr4_1:67645766-67645785 None:intergenic 40.0%
TGAAGAAGACACTGAATTGG+TGG - chr4_1:67645843-67645862 Msa0566530:CDS 40.0%
GAAGAAGACACTGAATTGGT+GGG - chr4_1:67645844-67645863 Msa0566530:CDS 40.0%
!! GACTTGATGTGGTTTGGTAT+CGG - chr4_1:67645866-67645885 Msa0566530:CDS 40.0%
TCCGGAATATTTGTGCTTAC+CGG - chr4_1:67645902-67645921 Msa0566530:CDS 40.0%
TCCGGTAAGCACAAATATTC+CGG + chr4_1:67645906-67645925 None:intergenic 40.0%
!! AGAGTTTGCTGTGGAAATTC+CGG - chr4_1:67646015-67646034 Msa0566530:CDS 40.0%
!! TAAGAGAAAGTACCAGCAAC+CGG + chr4_1:67646037-67646056 None:intergenic 40.0%
CGAATAAGATTGATCTCGAG+TGG - chr4_1:67646254-67646273 Msa0566530:CDS 40.0%
TCTTGGAGAAGTCAAAAGGT+AGG + chr4_1:67646734-67646753 None:intergenic 40.0%
GACTCTTATCTTAAGACGGA+TGG - chr4_1:67646908-67646927 Msa0566530:CDS 40.0%
TCTTATCTTAAGACGGATGG+AGG - chr4_1:67646911-67646930 Msa0566530:CDS 40.0%
!!! TTTTTTGTCAGGTAGCCTAG+TGG - chr4_1:67647008-67647027 Msa0566530:CDS 40.0%
AGATTCACACGCATTATGTG+TGG - chr4_1:67647033-67647052 Msa0566530:CDS 40.0%
GGGATAATAAGTACAGGAGT+TGG + chr4_1:67647095-67647114 None:intergenic 40.0%
ATCAACTGAGCTACACTTAC+GGG - chr4_1:67647123-67647142 Msa0566530:CDS 40.0%
AAAACGTAGGCACTAGAATC+CGG + chr4_1:67647548-67647567 None:intergenic 40.0%
AGTCGGAGAAAGGAATTAAC+AGG + chr4_1:67647665-67647684 None:intergenic 40.0%
ACTGATGAATGGAGGAATCT+TGG + chr4_1:67647840-67647859 None:intergenic 40.0%
CGCCTGTCTATTACTATTAG+AGG + chr4_1:67648141-67648160 None:intergenic 40.0%
!! AGGATACTTAAAGAGTGTCC+TGG + chr4_1:67648552-67648571 None:intergenic 40.0%
AAAGTTAACGAGTGTCTTCG+GGG + chr4_1:67648679-67648698 None:intergenic 40.0%
CAGATGCTTTAGCAAAATGG+GGG + chr4_1:67649169-67649188 None:intergenic 40.0%
GCAGATGCTTTAGCAAAATG+GGG + chr4_1:67649170-67649189 None:intergenic 40.0%
TCAACGTCTCAACTAACACA+TGG - chr4_1:67649917-67649936 Msa0566530:intron 40.0%
! TAACACATGGTGTCAGAGTT+TGG - chr4_1:67649930-67649949 Msa0566530:intron 40.0%
! AATATCCATGTTGCCACTTC+CGG - chr4_1:67650020-67650039 Msa0566530:intron 40.0%
TTTGGAAAAATTGCCGGAAG+TGG + chr4_1:67650036-67650055 None:intergenic 40.0%
! CAGTACTAGGACTTAGTCTT+TGG + chr4_1:67650054-67650073 None:intergenic 40.0%
ACATTTAGCAGTGCAGTACT+AGG + chr4_1:67650067-67650086 None:intergenic 40.0%
CTAAATAGCCCACCCTAAAT+TGG - chr4_1:67650394-67650413 Msa0566530:intron 40.0%
CTAAATAGCCCACCCTAAAT+TGG - chr4_1:67650394-67650413 Msa0566530:intron 40.0%
CTAAATAGCCCACCCTAAAT+TGG - chr4_1:67650394-67650413 Msa0566530:intron 40.0%
! TTCTCTCCGGTGTCAATTTA+GGG + chr4_1:67650750-67650769 None:intergenic 40.0%
! ATTCTCTCCGGTGTCAATTT+AGG + chr4_1:67650751-67650770 None:intergenic 40.0%
TAACCATGCTTTGGTACTCT+TGG - chr4_1:67651906-67651925 Msa0566530:intron 40.0%
ATGCTTTGGTACTCTTGGTT+CGG - chr4_1:67651911-67651930 Msa0566530:intron 40.0%
!!! ATTCGGGTTTTTTGGCGTAT+TGG + chr4_1:67651972-67651991 None:intergenic 40.0%
TACGCCAAAAAACCCGAATT+CGG - chr4_1:67651973-67651992 Msa0566530:intron 40.0%
!!! AGTACCGAATTCGGGTTTTT+TGG + chr4_1:67651980-67651999 None:intergenic 40.0%
TGCCTATGACATATTCAAGG+AGG + chr4_1:67652149-67652168 None:intergenic 40.0%
CGTTGCCTATGACATATTCA+AGG + chr4_1:67652152-67652171 None:intergenic 40.0%
! ATCAGGGTTTTTGTTGCAGA+GGG + chr4_1:67652211-67652230 None:intergenic 40.0%
CATAGTCAGGGTTCATATTG+TGG + chr4_1:67652251-67652270 None:intergenic 40.0%
CACAATATGAACCCTGACTA+TGG - chr4_1:67652249-67652268 Msa0566530:intron 40.0%
CAATAGCAATAGGGTCAAGA+TGG + chr4_1:67652275-67652294 None:intergenic 40.0%
CATCTTGACCCTATTGCTAT+TGG - chr4_1:67652273-67652292 Msa0566530:intron 40.0%
CTAGAGCTCCAATAGCAATA+GGG + chr4_1:67652284-67652303 None:intergenic 40.0%
ACTAGAGCTCCAATAGCAAT+AGG + chr4_1:67652285-67652304 None:intergenic 40.0%
!! TTTGGTGCTGTAAACTGCAA+GGG + chr4_1:67652319-67652338 None:intergenic 40.0%
TGTGGCTATGTAGTTGAAGA+TGG + chr4_1:67652349-67652368 None:intergenic 40.0%
TGAAGATAATGACAGCCATG+TGG + chr4_1:67652377-67652396 None:intergenic 40.0%
TCAATGACTTCACTCCTTTC+GGG - chr4_1:67652436-67652455 Msa0566530:intron 40.0%
GCTGAAGAAACTAAAAACCC+TGG - chr4_1:67652531-67652550 Msa0566530:intron 40.0%
CAATAGGAATGTCTCTACCA+GGG + chr4_1:67652551-67652570 None:intergenic 40.0%
! GACATTCCTATTGGTCTAGT+TGG - chr4_1:67652558-67652577 Msa0566530:intron 40.0%
GCACTAAAAGCAACTGAGAA+AGG + chr4_1:67652672-67652691 None:intergenic 40.0%
!!! TCAGTTGCTTTTAGTGCTGT+TGG - chr4_1:67652675-67652694 Msa0566530:intron 40.0%
!! TGCTTTTAGTGCTGTTGGAA+TGG - chr4_1:67652680-67652699 Msa0566530:intron 40.0%
! TTAGTGCTGTTGGAATGGAT+TGG - chr4_1:67652685-67652704 Msa0566530:intron 40.0%
! TAGTGCTGTTGGAATGGATT+GGG - chr4_1:67652686-67652705 Msa0566530:intron 40.0%
!! AGGAATGACAACGGTTTTGT+TGG - chr4_1:67652740-67652759 Msa0566530:intron 40.0%
TCATCAACAAGAGCAAACCA+AGG + chr4_1:67652825-67652844 None:intergenic 40.0%
! GCTCTTGTTGATGAAAGAAC+TGG - chr4_1:67652831-67652850 Msa0566530:intron 40.0%
TCAAGTGGGGTAACTACAAA+AGG - chr4_1:67653005-67653024 Msa0566530:intron 40.0%
CAAGTGGGGTAACTACAAAA+GGG - chr4_1:67653006-67653025 Msa0566530:intron 40.0%
ATCAAGTGAGTCTCATTGTG+TGG - chr4_1:67653030-67653049 Msa0566530:intron 40.0%
!! GTGTGGCTTGTGTTGATTAT+TGG - chr4_1:67653047-67653066 Msa0566530:intron 40.0%
ATGGATAAAGAAGGTAGCCA+AGG + chr4_1:67653230-67653249 None:intergenic 40.0%
TGAGAAGCAATGGAACAAGA+TGG - chr4_1:67653421-67653440 Msa0566530:CDS 40.0%
!!! ATTTCGGTTGTGGTTTTGTG+TGG - chr4_1:67653562-67653581 Msa0566530:CDS 40.0%
!!! TTTCGGTTGTGGTTTTGTGT+GGG - chr4_1:67653563-67653582 Msa0566530:CDS 40.0%
AACTCTTAAACGACTCCTCC+GGG + chr4_1:67645706-67645725 None:intergenic 45.0%
CAACTCTTAAACGACTCCTC+CGG + chr4_1:67645707-67645726 None:intergenic 45.0%
CTATCATGGAAACACCTCTC+CGG - chr4_1:67645744-67645763 Msa0566530:CDS 45.0%
TGGAGATTAAGGCTAGGAGT+GGG - chr4_1:67645813-67645832 Msa0566530:CDS 45.0%
TGAATTGGTGGGACTTGATG+TGG - chr4_1:67645855-67645874 Msa0566530:CDS 45.0%
ATTTGTGCTTACCGGACTTG+AGG - chr4_1:67645910-67645929 Msa0566530:CDS 45.0%
ACAAACGACAACACAACTGC+CGG + chr4_1:67645953-67645972 None:intergenic 45.0%
! GTGTTGTCGTTTGTCATCTC+CGG - chr4_1:67645959-67645978 Msa0566530:CDS 45.0%
GATTGATCTCGAGTGGTTAG+TGG - chr4_1:67646261-67646280 Msa0566530:CDS 45.0%
GCATGAGGTTGTCAAAGTCT+TGG + chr4_1:67646751-67646770 None:intergenic 45.0%
CGAAGGGAGTAATATGCATG+AGG + chr4_1:67646766-67646785 None:intergenic 45.0%
GATGGAGGAACCAATCTAGA+TGG - chr4_1:67646926-67646945 Msa0566530:CDS 45.0%
ACGCATTATGTGTGGAGAAG+TGG - chr4_1:67647041-67647060 Msa0566530:CDS 45.0%
CGCATTATGTGTGGAGAAGT+GGG - chr4_1:67647042-67647061 Msa0566530:CDS 45.0%
GCATTATGTGTGGAGAAGTG+GGG - chr4_1:67647043-67647062 Msa0566530:CDS 45.0%
CATTATGTGTGGAGAAGTGG+GGG - chr4_1:67647044-67647063 Msa0566530:CDS 45.0%
CGTGGGCAATTTCATCTGTA+TGG + chr4_1:67648244-67648263 None:intergenic 45.0%
TCTTCTTAACGAGTGCTTCC+AGG - chr4_1:67648531-67648550 Msa0566530:intron 45.0%
AAAAGTTAACGAGCGCCTTC+GGG + chr4_1:67648824-67648843 None:intergenic 45.0%
GAAAAGTTAACGAGCGCCTT+CGG + chr4_1:67648825-67648844 None:intergenic 45.0%
TGGCACGTTCTCTCTTTGAT+CGG + chr4_1:67649069-67649088 None:intergenic 45.0%
TGAGCACCAGCTAAATATGG+TGG - chr4_1:67649837-67649856 Msa0566530:intron 45.0%
! CAATGGTGCCAATTTAGGGT+GGG + chr4_1:67650405-67650424 None:intergenic 45.0%
! TCAATGGTGCCAATTTAGGG+TGG + chr4_1:67650406-67650425 None:intergenic 45.0%
! CAATGGTGCCAATTTAGGGT+GGG + chr4_1:67650405-67650424 None:intergenic 45.0%
! TCAATGGTGCCAATTTAGGG+TGG + chr4_1:67650406-67650425 None:intergenic 45.0%
! CAATGGTGCCAATTTAGGGT+GGG + chr4_1:67650405-67650424 None:intergenic 45.0%
! TCAATGGTGCCAATTTAGGG+TGG + chr4_1:67650406-67650425 None:intergenic 45.0%
AGTCCACCCTAAATTGACAC+CGG - chr4_1:67650741-67650760 Msa0566530:intron 45.0%
! CGTTTGGGAGTATAGAGCTT+TGG - chr4_1:67651508-67651527 Msa0566530:intron 45.0%
! TATAGAGCTTTGGTACGCGT+CGG - chr4_1:67651518-67651537 Msa0566530:intron 45.0%
TAGGTGCCTGTCAACTTTGA+TGG + chr4_1:67651623-67651642 None:intergenic 45.0%
GCGTCTTCATCCAATGCATT+CGG - chr4_1:67651806-67651825 Msa0566530:intron 45.0%
GTGTAATGCACCGAATGCAT+TGG + chr4_1:67651819-67651838 None:intergenic 45.0%
AAAGCATGGTTACCGCTGAT+TGG + chr4_1:67651898-67651917 None:intergenic 45.0%
AATCAGCGGTAACCATGCTT+TGG - chr4_1:67651897-67651916 Msa0566530:intron 45.0%
!! GAACCAAGAGTACCAAAGCA+TGG + chr4_1:67651912-67651931 None:intergenic 45.0%
! GGTGGTTTGTGCGAATTCAA+GGG - chr4_1:67651932-67651951 Msa0566530:intron 45.0%
! GTGGTTTGTGCGAATTCAAG+GGG - chr4_1:67651933-67651952 Msa0566530:intron 45.0%
!! TGGTTCGCAAGTACCGAATT+CGG + chr4_1:67651989-67652008 None:intergenic 45.0%
TTTGTTGCCTTCATAGCTGC+CGG - chr4_1:67652117-67652136 Msa0566530:intron 45.0%
! CATCAGGGTTTTTGTTGCAG+AGG + chr4_1:67652212-67652231 None:intergenic 45.0%
!! CTTTGGTGCTGTAAACTGCA+AGG + chr4_1:67652320-67652339 None:intergenic 45.0%
CTTGCAGTTTACAGCACCAA+AGG - chr4_1:67652318-67652337 Msa0566530:intron 45.0%
GTTGAAGATGGAAGAGCCTT+TGG + chr4_1:67652337-67652356 None:intergenic 45.0%
CATAGCCACAATGTTCCACA+TGG - chr4_1:67652359-67652378 Msa0566530:intron 45.0%
GCATGGAATGGTCAGTTCTT+CGG - chr4_1:67652461-67652480 Msa0566530:intron 45.0%
CCAATAGGAATGTCTCTACC+AGG + chr4_1:67652552-67652571 None:intergenic 45.0%
CCTGGTAGAGACATTCCTAT+TGG - chr4_1:67652549-67652568 Msa0566530:intron 45.0%
!! GTTTTGTTGGTTAGCGCTGT+TGG - chr4_1:67652753-67652772 Msa0566530:intron 45.0%
TCAACAAGAGCAAACCAAGG+TGG + chr4_1:67652822-67652841 None:intergenic 45.0%
CCAGTCCCTATAAACCACAA+AGG + chr4_1:67653146-67653165 None:intergenic 45.0%
CCTTTGTGGTTTATAGGGAC+TGG - chr4_1:67653143-67653162 Msa0566530:intron 45.0%
! TTATAGGGACTGGTGCTCTT+TGG - chr4_1:67653153-67653172 Msa0566530:intron 45.0%
GATTTGGACAGGGTTTCTCT+TGG - chr4_1:67653307-67653326 Msa0566530:CDS 45.0%
!! ACATAGCAGTGGTTCTGATC+CGG - chr4_1:67653394-67653413 Msa0566530:CDS 45.0%
TTCCATTGCTTCTCAACCTC+CGG + chr4_1:67653416-67653435 None:intergenic 45.0%
CAATGGAACAAGATGGAGCA+AGG - chr4_1:67653428-67653447 Msa0566530:CDS 45.0%
!!! TTTAGAATTTTTTTTTTTAA+AGG + chr4_1:67647266-67647285 None:intergenic 5.0%
!!! AAATATAATTCTTTATATTT+TGG + chr4_1:67648447-67648466 None:intergenic 5.0%
!! TTAAATATTTATTAAAAAGA+GGG + chr4_1:67649517-67649536 None:intergenic 5.0%
!! TAATAAAATTAAATAGTTTA+AGG - chr4_1:67649639-67649658 Msa0566530:intron 5.0%
!! ATATTAAAATTATTTGATTA+TGG + chr4_1:67649770-67649789 None:intergenic 5.0%
!! ATAGATAAAAAATAATAAAA+CGG + chr4_1:67651841-67651860 None:intergenic 5.0%
GAAAAACGACTTCTTCCCGG+AGG - chr4_1:67645688-67645707 Msa0566530:three_prime_UTR 50.0%
CGGAGGAGTCGTTTAAGAGT+TGG - chr4_1:67645705-67645724 Msa0566530:three_prime_UTR 50.0%
AAACGATCCTTCAACCGGAG+AGG + chr4_1:67645761-67645780 None:intergenic 50.0%
AGCTGGTGGAGATTAAGGCT+AGG - chr4_1:67645807-67645826 Msa0566530:CDS 50.0%
GTGGAGATTAAGGCTAGGAG+TGG - chr4_1:67645812-67645831 Msa0566530:CDS 50.0%
TGGTGGGACTTGATGTGGTT+TGG - chr4_1:67645860-67645879 Msa0566530:CDS 50.0%
!! TTTGGTATCGGCGCTGTTGT+CGG - chr4_1:67645878-67645897 Msa0566530:CDS 50.0%
ATGCTCCTTAGCCTCAAGTC+CGG + chr4_1:67645924-67645943 None:intergenic 50.0%
TGCGTGTGAATCTAGCCACT+AGG + chr4_1:67647026-67647045 None:intergenic 50.0%
AGGAGTTGGGGTTCGAATCT+CGG + chr4_1:67647081-67647100 None:intergenic 50.0%
! AAGTAGAGAAGTGGGGTGTC+TGG + chr4_1:67647391-67647410 None:intergenic 50.0%
AAAGTTAACGAGCGCCTTCG+GGG + chr4_1:67648823-67648842 None:intergenic 50.0%
AGAGAACGTGCCAGCTCTAT+CGG - chr4_1:67649076-67649095 Msa0566530:intron 50.0%
! GTTTTGCTAGCCGATAGAGC+TGG + chr4_1:67649089-67649108 None:intergenic 50.0%
AATTGCCGGAAGTGGCAACA+TGG + chr4_1:67650028-67650047 None:intergenic 50.0%
! TCTCCGGTGTCAATTTAGGG+TGG + chr4_1:67650747-67650766 None:intergenic 50.0%
!! GTGGTATTGGCTTGGGTCTT+GGG + chr4_1:67650804-67650823 None:intergenic 50.0%
!! TGACCTGGTGGTATTGGCTT+GGG + chr4_1:67650811-67650830 None:intergenic 50.0%
!! TTGACCTGGTGGTATTGGCT+TGG + chr4_1:67650812-67650831 None:intergenic 50.0%
!! TTGGGTTGACCTGGTGGTAT+TGG + chr4_1:67650817-67650836 None:intergenic 50.0%
!! AAAACCCACTTGGGTTGACC+TGG + chr4_1:67650826-67650845 None:intergenic 50.0%
!! CTTTGGTACTCTTGGTTCGG+TGG - chr4_1:67651914-67651933 Msa0566530:intron 50.0%
! CGGTGGTTTGTGCGAATTCA+AGG - chr4_1:67651931-67651950 Msa0566530:intron 50.0%
!! GGTTCGCAAGTACCGAATTC+GGG + chr4_1:67651988-67652007 None:intergenic 50.0%
GATGTTTCCGGCAGCTATGA+AGG + chr4_1:67652127-67652146 None:intergenic 50.0%
ATATGTCATAGGCAACGCCG+CGG - chr4_1:67652155-67652174 Msa0566530:CDS 50.0%
GTTGCAGAGGGTGGCAAAAT+AGG + chr4_1:67652199-67652218 None:intergenic 50.0%
! AGGGTTTTTGTTGCAGAGGG+TGG + chr4_1:67652208-67652227 None:intergenic 50.0%
GGTCAAGATGGCCATAGTCA+GGG + chr4_1:67652263-67652282 None:intergenic 50.0%
GTAAACTGCAAGGGCTGTGA+TGG + chr4_1:67652310-67652329 None:intergenic 50.0%
GACAGCCATGTGGAACATTG+TGG + chr4_1:67652367-67652386 None:intergenic 50.0%
!! TTCACTCCTTTCGGGTTGCA+TGG - chr4_1:67652444-67652463 Msa0566530:intron 50.0%
!! TCCTTTCGGGTTGCATGGAA+TGG - chr4_1:67652449-67652468 Msa0566530:intron 50.0%
ACCATTCCATGCAACCCGAA+AGG + chr4_1:67652453-67652472 None:intergenic 50.0%
!! GCAACTGAGAAAGGAGCATC+AGG + chr4_1:67652663-67652682 None:intergenic 50.0%
GTACTCACATGATGCCACCT+TGG - chr4_1:67652805-67652824 Msa0566530:intron 50.0%
GAAGGTAGCCAAGGAACCAA+AGG + chr4_1:67653221-67653240 None:intergenic 50.0%
ATCCGGAGGTTGAGAAGCAA+TGG - chr4_1:67653411-67653430 Msa0566530:CDS 50.0%
GGAAACACCTCTCCGGTTGA+AGG - chr4_1:67645751-67645770 Msa0566530:CDS 55.0%
TAATCTCCACCAGCTCTGCG+TGG + chr4_1:67645802-67645821 None:intergenic 55.0%
CGCAGAGCTGGTGGAGATTA+AGG - chr4_1:67645802-67645821 Msa0566530:CDS 55.0%
GCTTACCGGACTTGAGGCTA+AGG - chr4_1:67645916-67645935 Msa0566530:CDS 55.0%
! CTTGAGGCTAAGGAGCATGC+AGG - chr4_1:67645926-67645945 Msa0566530:CDS 55.0%
GCTGTGGAAATTCCGGTTGC+TGG - chr4_1:67646022-67646041 Msa0566530:CDS 55.0%
TGTGGAGAAGTGGGGGATGT+GGG - chr4_1:67647051-67647070 Msa0566530:CDS 55.0%
!! GTGCTTAAAGAGTGCCCCGA+AGG - chr4_1:67648662-67648681 Msa0566530:intron 55.0%
GACACCGGAGAGAATCGAAC+CGG - chr4_1:67650756-67650775 Msa0566530:intron 55.0%
! GTCTCCGGTTCGATTCTCTC+CGG + chr4_1:67650763-67650782 None:intergenic 55.0%
!! GGTGGTATTGGCTTGGGTCT+TGG + chr4_1:67650805-67650824 None:intergenic 55.0%
AGACCCAAGCCAATACCACC+AGG - chr4_1:67650805-67650824 Msa0566530:intron 55.0%
TACCACCAGGTCAACCCAAG+TGG - chr4_1:67650818-67650837 Msa0566530:intron 55.0%
ACCACCAGGTCAACCCAAGT+GGG - chr4_1:67650819-67650838 Msa0566530:intron 55.0%
! TCGCAATTCGTGTCGGTACG+CGG - chr4_1:67651441-67651460 Msa0566530:intron 55.0%
! ATTCGTGTCGGTACGCGGTA+CGG - chr4_1:67651446-67651465 Msa0566530:intron 55.0%
GCAGAGGGTGGCAAAATAGG+AGG + chr4_1:67652196-67652215 None:intergenic 55.0%
GGGTCAAGATGGCCATAGTC+AGG + chr4_1:67652264-67652283 None:intergenic 55.0%
! GGGGAGTTCCTTTGGTTCCT+TGG - chr4_1:67653210-67653229 Msa0566530:CDS 55.0%
!! TAGCAGTGGTTCTGATCCGG+AGG - chr4_1:67653397-67653416 Msa0566530:CDS 55.0%
GCGGTTGGAGAGGTGGTTGA+CGG - chr4_1:67645629-67645648 Msa0566530:three_prime_UTR 60.0%
GTTGGAGAGGTGGTTGACGG+CGG - chr4_1:67645632-67645651 Msa0566530:three_prime_UTR 60.0%
! GGCGGAGGAGTACGTAGAAG+AGG - chr4_1:67645653-67645672 Msa0566530:three_prime_UTR 60.0%
ATCCAGTGACCACGCAGAGC+TGG - chr4_1:67645790-67645809 Msa0566530:CDS 60.0%
! GGCTAAGGAGCATGCAGGTC+CGG - chr4_1:67645931-67645950 Msa0566530:CDS 60.0%
GTGTGGAGAAGTGGGGGATG+TGG - chr4_1:67647050-67647069 Msa0566530:CDS 60.0%
GTGGAGAAGTGGGGGATGTG+GGG - chr4_1:67647052-67647071 Msa0566530:CDS 60.0%
TGGAGAAGTGGGGGATGTGG+GGG - chr4_1:67647053-67647072 Msa0566530:CDS 60.0%
GGGGGGCCACCATATTTAGC+TGG + chr4_1:67649846-67649865 None:intergenic 60.0%
TCGAACCGGAGACCTTGCAG+AGG - chr4_1:67650770-67650789 Msa0566530:intron 60.0%
GTGCTCCTCTGCAAGGTCTC+CGG + chr4_1:67650778-67650797 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCTGCA+AGG + chr4_1:67650785-67650804 None:intergenic 60.0%
!! ACCCACTTGGGTTGACCTGG+TGG + chr4_1:67650823-67650842 None:intergenic 60.0%
! TTCGTGTCGGTACGCGGTAC+GGG - chr4_1:67651447-67651466 Msa0566530:intron 60.0%
GGTCCATGATCGAGCTACCG+CGG + chr4_1:67652175-67652194 None:intergenic 60.0%
CACCAGCTCTGCGTGGTCAC+TGG + chr4_1:67645795-67645814 None:intergenic 65.0%
CAGTGACCACGCAGAGCTGG+TGG - chr4_1:67645793-67645812 Msa0566530:CDS 65.0%
!! ATCGGCGCTGTTGTCGGCTC+CGG - chr4_1:67645884-67645903 Msa0566530:CDS 65.0%
GTCGGTACGCGGTACGGGTA+CGG - chr4_1:67651452-67651471 Msa0566530:intron 65.0%
TCGGTACGCGGTACGGGTAC+GGG - chr4_1:67651453-67651472 Msa0566530:intron 65.0%
ACGCCGCGGTAGCTCGATCA+TGG - chr4_1:67652169-67652188 Msa0566530:CDS 65.0%
GGAGAGGTGGTTGACGGCGG+CGG - chr4_1:67645635-67645654 Msa0566530:three_prime_UTR 70.0%
GCGGTACGGGTACGGGTTCG+TGG - chr4_1:67651460-67651479 Msa0566530:intron 70.0%
GAGGTGGTTGACGGCGGCGG+AGG - chr4_1:67645638-67645657 Msa0566530:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67645626 67653597 67645626 ID=Msa0566530;Name=Msa0566530
chr4_1 mRNA 67645626 67653597 67645626 ID=Msa0566530-mRNA-1;Parent=Msa0566530;Name=Msa0566530-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0.25|0.5|1|1|4|104|668
chr4_1 exon 67645626 67647144 67645626 ID=Msa0566530-mRNA-1:exon:22201;Parent=Msa0566530-mRNA-1
chr4_1 exon 67647229 67647320 67647229 ID=Msa0566530-mRNA-1:exon:22200;Parent=Msa0566530-mRNA-1
chr4_1 exon 67652123 67652204 67652123 ID=Msa0566530-mRNA-1:exon:22199;Parent=Msa0566530-mRNA-1
chr4_1 exon 67653180 67653597 67653180 ID=Msa0566530-mRNA-1:exon:22198;Parent=Msa0566530-mRNA-1
chr4_1 CDS 67653180 67653597 67653180 ID=Msa0566530-mRNA-1:cds;Parent=Msa0566530-mRNA-1
chr4_1 CDS 67652123 67652204 67652123 ID=Msa0566530-mRNA-1:cds;Parent=Msa0566530-mRNA-1
chr4_1 CDS 67647229 67647320 67647229 ID=Msa0566530-mRNA-1:cds;Parent=Msa0566530-mRNA-1
chr4_1 CDS 67645730 67647144 67645730 ID=Msa0566530-mRNA-1:cds;Parent=Msa0566530-mRNA-1
chr4_1 three_prime_UTR 67645626 67645729 67645626 ID=Msa0566530-mRNA-1:three_prime_utr;Parent=Msa0566530-mRNA-1
Gene Sequence

>Msa0566530

ATGGCGGTTGGAGAGGTGGTTGACGGCGGCGGAGGAGTACGTAGAAGAGGATGTACGTTTCAGAAAAACGACTTCTTCCCGGAGGAGTCGTTTAAGAGTTGGAAAAACTACGGAAAATCTATCATGGAAACACCTCTCCGGTTGAAGGATCGTTTGTTGAAACGATCCAGTGACCACGCAGAGCTGGTGGAGATTAAGGCTAGGAGTGGGAATGAGATGAAGAAGACACTGAATTGGTGGGACTTGATGTGGTTTGGTATCGGCGCTGTTGTCGGCTCCGGAATATTTGTGCTTACCGGACTTGAGGCTAAGGAGCATGCAGGTCCGGCAGTTGTGTTGTCGTTTGTCATCTCCGGTATATCTGCTTTGTTATCAGTGTTTTGTTATACAGAGTTTGCTGTGGAAATTCCGGTTGCTGGTAGCCTAGTGGCTAGATTCACACGCATTATGTGTGGAGAAGTGGGGGATGTGGGGGATCCGAGATTCGAACCCCAACTCCTCGGTAACCATGCTTTGGTACTCTTGGTTCGGTGGTTTGTGCGAATTCAAGGGGAATTTGTTGCGTACCAATACGCCAAAAAACCCGAATTCGGTGGATCATTTGCTTACTTGAGAGTAGAAATGGGAGATTTTGTTGCCTTCATAGCTGCCGGAAACATCCTCCTTGAATATGTCATAGGCAACGCCGCGGTAGCTCGATCATGGACCTCCTATTTTGCCACCCTCTGCAACAAAAACCCTGATGATTTTCGTATAGTAGTCCACAATATGAACCCTGACTATGGCCATCTTGACCCTATTGCTATTGGAGCTCTAGTAGCCATCACAGCCCTTGCAGTTTACAGCACCAAAGGCTCTTCCATCTTCAACTACATAGCCACAATGTTCCACATGGCTGTCATTATCTTCATAGTAATTGCTGGTCTCAGCAAAGCCAAAACCGAAAACTTCAATGACTTCACTCCTTTCGGGTTGCATGGAATGGTCAGTTCTTCGGCCGTTCTTTTCTTTGCTTATATTGGCTTTGATGCAGTTTCAACTATGGCTGAAGAAACTAAAAACCCTGGTAGAGACATTCCTATTGGTCTAGTTGGATCAATGACTATTACAACAGCAATATATTGCTTACTAGCAGCAACACTTTGTCTTATGCAGAATTACAAAGAACTTGATCCTGATGCTCCTTTCTCAGTTGCTTTTAGTGCTGTTGGAATGGATTGGGCTAAGTACATCGTTTCATTAGGTGCTTTGAAAGGAATGACAACGGTTTTGTTGGTTAGCGCTGTTGGTCAAGCTCGTTACTTAACACACATTGCACGTACTCACATGATGCCACCTTGGTTTGCTCTTGTTGATGAAAGAACTGGAACACCTATGAATGCTACGATCTCAATGCTTATTGCTACTGCTATTGTTGCTTTCTTCACCGATCTTAGTATTCTAGCTAACCTTTTGTCGATTTCTACTTTATTTATCTTTTCACTTGTGGCATTAGCACTTTTAGTAAGGAGATATTATTCAAGTGGGGTAACTACAAAAGGGAATCAAGTGAGTCTCATTGTGTGGCTTGTGTTGATTATTGGTTCTTCAATTGGAATTTCAGCTTATTGGGCTAATAGTAGTGAGCATAATTGGATTGGATATACAATCTTTGCTCCTTTGTGGTTTATAGGGACTGGTGCTCTTTGGCTTTTTGTTCCAATGGCAAAGAAGCCTAAATTATGGGGAGTTCCTTTGGTTCCTTGGCTACCTTCTTTATCCATTGCTATTAACATATTCCTTCTTGGAACTATTGATAAAAAATCGTATATAAGGTTTACGATTTGGACAGGGTTTCTCTTGGTATACTATGTGCTATTAGGGTTACATGCTTCATATGACACGGCAAAAGAATTTGATAAGAGTAAACATAGCAGTGGTTCTGATCCGGAGGTTGAGAAGCAATGGAACAAGATGGAGCAAGGTGCTGTAGAGCAAGATTCTAGTGTTGCACATGTTTCCAATTAA
Protein sequence

>Msa0566530

MAVGEVVDGGGGVRRRGCTFQKNDFFPEESFKSWKNYGKSIMETPLRLKDRLLKRSSDHAELVEIKARSGNEMKKTLNWWDLMWFGIGAVVGSGIFVLTGLEAKEHAGPAVVLSFVISGISALLSVFCYTEFAVEIPVAGSLVARFTRIMCGEVGDVGDPRFEPQLLGNHALVLLVRWFVRIQGEFVAYQYAKKPEFGGSFAYLRVEMGDFVAFIAAGNILLEYVIGNAAVARSWTSYFATLCNKNPDDFRIVVHNMNPDYGHLDPIAIGALVAITALAVYSTKGSSIFNYIATMFHMAVIIFIVIAGLSKAKTENFNDFTPFGLHGMVSSSAVLFFAYIGFDAVSTMAEETKNPGRDIPIGLVGSMTITTAIYCLLAATLCLMQNYKELDPDAPFSVAFSAVGMDWAKYIVSLGALKGMTTVLLVSAVGQARYLTHIARTHMMPPWFALVDERTGTPMNATISMLIATAIVAFFTDLSILANLLSISTLFIFSLVALALLVRRYYSSGVTTKGNQVSLIVWLVLIIGSSIGISAYWANSSEHNWIGYTIFAPLWFIGTGALWLFVPMAKKPKLWGVPLVPWLPSLSIAINIFLLGTIDKKSYIRFTIWTGFLLVYYVLLGLHASYDTAKEFDKSKHSSGSDPEVEKQWNKMEQGAVEQDSSVAHVSN*