Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278130 | sp|P49227|RL52_ARATH | 75.732 | 239 | 36 | 2 | 1 | 232 | 1 | 224 | 4.86e-126 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278130 | A0A2K3P1D2 | 70.805 | 298 | 18 | 3 | 2 | 246 | 3 | 284 | 7.84e-138 | 398 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1278130 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0016350 | Msa1278130 | 0.816492 | 5.377223e-52 | -8.615850e-47 |
| Msa0027590 | Msa1278130 | 0.842939 | 1.902843e-58 | -8.615850e-47 |
| Msa0040220 | Msa1278130 | 0.888978 | 3.654311e-73 | -8.615850e-47 |
| Msa0072570 | Msa1278130 | 0.815272 | 1.006636e-51 | -8.615850e-47 |
| Msa0075350 | Msa1278130 | 0.815336 | 9.740772e-52 | -8.615850e-47 |
| Msa0087910 | Msa1278130 | 0.856550 | 2.981721e-62 | -8.615850e-47 |
| Msa0116600 | Msa1278130 | 0.821002 | 5.088515e-53 | -8.615850e-47 |
| Msa0116690 | Msa1278130 | 0.819695 | 1.014955e-52 | -8.615850e-47 |
| Msa0602900 | Msa1278130 | 0.847297 | 1.264120e-59 | -8.615850e-47 |
| Msa0605890 | Msa1278130 | 0.829869 | 4.043893e-55 | -8.615850e-47 |
| Msa0619230 | Msa1278130 | 0.826796 | 2.228845e-54 | -8.615850e-47 |
| Msa0643960 | Msa1278130 | 0.847213 | 1.333337e-59 | -8.615850e-47 |
| Msa0648620 | Msa1278130 | 0.835579 | 1.545589e-56 | -8.615850e-47 |
| Msa0648670 | Msa1278130 | 0.839441 | 1.582027e-57 | -8.615850e-47 |
| Msa0653060 | Msa1278130 | 0.849783 | 2.590121e-60 | -8.615850e-47 |
| Msa0686550 | Msa1278130 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0694400 | Msa1278130 | 0.843751 | 1.155989e-58 | -8.615850e-47 |
| Msa0708630 | Msa1278130 | 0.819969 | 8.782258e-53 | -8.615850e-47 |
| Msa0788380 | Msa1278130 | 0.849962 | 2.308422e-60 | -8.615850e-47 |
| Msa0790450 | Msa1278130 | 0.868694 | 5.397030e-66 | -8.615850e-47 |
| Msa0799830 | Msa1278130 | 0.809074 | 2.264766e-50 | -8.615850e-47 |
| Msa0838070 | Msa1278130 | 0.813789 | 2.142245e-51 | -8.615850e-47 |
| Msa0128330 | Msa1278130 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
| Msa0132460 | Msa1278130 | 0.819711 | 1.006057e-52 | -8.615850e-47 |
| Msa0134580 | Msa1278130 | 0.832478 | 9.237631e-56 | -8.615850e-47 |
| Msa0144810 | Msa1278130 | 0.817369 | 3.417068e-52 | -8.615850e-47 |
| Msa0146580 | Msa1278130 | 0.822400 | 2.417184e-53 | -8.615850e-47 |
| Msa0167860 | Msa1278130 | 0.830478 | 2.870732e-55 | -8.615850e-47 |
| Msa0182050 | Msa1278130 | 0.820361 | 7.143205e-53 | -8.615850e-47 |
| Msa0188740 | Msa1278130 | 0.843034 | 1.795803e-58 | -8.615850e-47 |
| Msa0191450 | Msa1278130 | 0.818666 | 1.740224e-52 | -8.615850e-47 |
| Msa0191550 | Msa1278130 | 0.834097 | 3.650049e-56 | -8.615850e-47 |
| Msa0192050 | Msa1278130 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0192300 | Msa1278130 | 0.851166 | 1.059152e-60 | -8.615850e-47 |
| Msa0194940 | Msa1278130 | 0.854220 | 1.422643e-61 | -8.615850e-47 |
| Msa1235950 | Msa1278130 | 0.806948 | 6.419332e-50 | -8.615850e-47 |
| Msa1235980 | Msa1278130 | 0.815126 | 1.084749e-51 | -8.615850e-47 |
| Msa1237040 | Msa1278130 | 0.888712 | 4.628401e-73 | -8.615850e-47 |
| Msa1240270 | Msa1278130 | 0.806051 | 9.923325e-50 | -8.615850e-47 |
| Msa1255850 | Msa1278130 | 0.813929 | 1.996089e-51 | -8.615850e-47 |
| Msa1258540 | Msa1278130 | 0.870243 | 1.690381e-66 | -8.615850e-47 |
| Msa1270640 | Msa1278130 | 0.813054 | 3.108330e-51 | -8.615850e-47 |
| Msa1270710 | Msa1278130 | 0.812414 | 4.291087e-51 | -8.615850e-47 |
| Msa1278130 | Msa1284060 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa1278130 | Msa1311400 | 0.832150 | 1.114144e-55 | -8.615850e-47 |
| Msa1278130 | Msa1317390 | 0.870755 | 1.148528e-66 | -8.615850e-47 |
| Msa1278130 | Msa1341780 | 0.843972 | 1.008290e-58 | -8.615850e-47 |
| Msa1278130 | Msa1351020 | 0.805085 | 1.582467e-49 | -8.615850e-47 |
| Msa1278130 | Msa1368920 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa1278130 | Msa1385480 | 0.832043 | 1.184150e-55 | -8.615850e-47 |
| Msa1278130 | Msa1390760 | 0.826237 | 3.029677e-54 | -8.615850e-47 |
| Msa1278130 | Msa1415620 | 0.801554 | 8.525660e-49 | -8.615850e-47 |
| Msa1278130 | Msa1424570 | 0.812280 | 4.589027e-51 | -8.615850e-47 |
| Msa1278130 | Msa1450560 | 0.872032 | 4.343137e-67 | -8.615850e-47 |
| Msa1278130 | Msa1463570 | 0.800767 | 1.235217e-48 | -8.615850e-47 |
| Msa1278130 | Msa1465700 | 0.819695 | 1.014757e-52 | -8.615850e-47 |
| Msa0369410 | Msa1278130 | 0.831446 | 1.662063e-55 | -8.615850e-47 |
| Msa0377370 | Msa1278130 | 0.808579 | 2.889830e-50 | -8.615850e-47 |
| Msa0377520 | Msa1278130 | 0.802549 | 5.323112e-49 | -8.615850e-47 |
| Msa0426090 | Msa1278130 | 0.883049 | 6.230298e-71 | -8.615850e-47 |
| Msa0426250 | Msa1278130 | 0.879609 | 1.084081e-69 | -8.615850e-47 |
| Msa0432750 | Msa1278130 | 0.802926 | 4.448131e-49 | -8.615850e-47 |
| Msa0472480 | Msa1278130 | 0.879025 | 1.743960e-69 | -8.615850e-47 |
| Msa0475810 | Msa1278130 | 0.877438 | 6.281683e-69 | -8.615850e-47 |
| Msa0481520 | Msa1278130 | 0.815273 | 1.005987e-51 | -8.615850e-47 |
| Msa0482560 | Msa1278130 | 0.842356 | 2.718069e-58 | -8.615850e-47 |
| Msa1025200 | Msa1278130 | 0.821933 | 3.102019e-53 | -8.615850e-47 |
| Msa1025220 | Msa1278130 | 0.819288 | 1.256418e-52 | -8.615850e-47 |
| Msa1040160 | Msa1278130 | 0.872042 | 4.309763e-67 | -8.615850e-47 |
| Msa1041680 | Msa1278130 | 0.847310 | 1.254098e-59 | -8.615850e-47 |
| Msa1054280 | Msa1278130 | 0.824904 | 6.268444e-54 | -8.615850e-47 |
| Msa1078980 | Msa1278130 | 0.809002 | 2.346360e-50 | -8.615850e-47 |
| Msa1083370 | Msa1278130 | 0.871375 | 7.167502e-67 | -8.615850e-47 |
| Msa1091290 | Msa1278130 | 0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa0270160 | Msa1278130 | 0.837136 | 6.210971e-57 | -8.615850e-47 |
| Msa0277600 | Msa1278130 | 0.803336 | 3.660152e-49 | -8.615850e-47 |
| Msa0281370 | Msa1278130 | 0.832695 | 8.162696e-56 | -8.615850e-47 |
| Msa0301220 | Msa1278130 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0301250 | Msa1278130 | 0.843072 | 1.754673e-58 | -8.615850e-47 |
| Msa0312210 | Msa1278130 | 0.804691 | 1.913014e-49 | -8.615850e-47 |
| Msa0313060 | Msa1278130 | 0.860942 | 1.452522e-63 | -8.615850e-47 |
| Msa0315430 | Msa1278130 | 0.848201 | 7.125274e-60 | -8.615850e-47 |
| Msa0340560 | Msa1278130 | 0.802201 | 6.276442e-49 | -8.615850e-47 |
| Msa1116940 | Msa1278130 | 0.852403 | 4.724707e-61 | -8.615850e-47 |
| Msa1126690 | Msa1278130 | 0.841438 | 4.751317e-58 | -8.615850e-47 |
| Msa1136880 | Msa1278130 | 0.836017 | 1.196843e-56 | -8.615850e-47 |
| Msa1136980 | Msa1278130 | 0.809018 | 2.327499e-50 | -8.615850e-47 |
| Msa1166570 | Msa1278130 | 0.845427 | 4.089475e-59 | -8.615850e-47 |
| Msa1169180 | Msa1278130 | 0.800588 | 1.343461e-48 | -8.615850e-47 |
| Msa1180000 | Msa1278130 | 0.826803 | 2.219601e-54 | -8.615850e-47 |
| Msa1186030 | Msa1278130 | 0.812884 | 3.386842e-51 | -8.615850e-47 |
| Msa1218610 | Msa1278130 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
| Msa0529900 | Msa1278130 | 0.800396 | 1.469722e-48 | -8.615850e-47 |
| Msa0547920 | Msa1278130 | 0.848541 | 5.737876e-60 | -8.615850e-47 |
| Msa0550420 | Msa1278130 | 0.801201 | 1.006821e-48 | -8.615850e-47 |
| Msa0573550 | Msa1278130 | 0.862684 | 4.257131e-64 | -8.615850e-47 |
| Msa0597240 | Msa1278130 | 0.862446 | 5.039510e-64 | -8.615850e-47 |
| Msa0861320 | Msa1278130 | 0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0929700 | Msa1278130 | 0.847432 | 1.160875e-59 | -8.615850e-47 |
| Msa0930100 | Msa1278130 | 0.837713 | 4.419613e-57 | -8.615850e-47 |
| Msa0930360 | Msa1278130 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278130 | MtrunA17_Chr8g0347691 | 92.453 | 212 | 1 | 1 | 1 | 212 | 1 | 197 | 1.27e-139 | 394 |
| Msa1278130 | MtrunA17_Chr3g0145691 | 84.434 | 212 | 18 | 1 | 1 | 212 | 1 | 197 | 5.30e-127 | 362 |
| Msa1278130 | MtrunA17_Chr4g0006821 | 42.609 | 115 | 38 | 2 | 141 | 227 | 10 | 124 | 2.82e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278130 | AT5G39740.2 | 75.732 | 239 | 36 | 2 | 1 | 232 | 1 | 224 | 4.94e-127 | 362 |
| Msa1278130 | AT5G39740.1 | 75.732 | 239 | 36 | 2 | 1 | 232 | 1 | 224 | 4.94e-127 | 362 |
| Msa1278130 | AT3G25520.3 | 75.732 | 239 | 36 | 2 | 1 | 232 | 1 | 224 | 1.11e-126 | 361 |
| Msa1278130 | AT3G25520.1 | 75.732 | 239 | 36 | 2 | 1 | 232 | 1 | 224 | 1.11e-126 | 361 |
| Msa1278130 | AT3G25520.2 | 73.214 | 112 | 23 | 1 | 128 | 232 | 2 | 113 | 1.73e-51 | 166 |
Find 88 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCACTGGTTCAACTTTC+TGG | -0.059970 | 8_3:-14166895 | Msa1278130:three_prime_UTR |
| GTTTATTGAGGTTAAAATTT+TGG | 0.119515 | 8_3:-14166934 | Msa1278130:three_prime_UTR |
| AAATTCCTGATTTCATTAAA+TGG | 0.175842 | 8_3:+14166625 | None:intergenic |
| TTCTTTGATGTGTTTCTTGT+TGG | 0.290575 | 8_3:-14166800 | Msa1278130:three_prime_UTR |
| CTCTCCCATTTAATGAAATC+AGG | 0.301012 | 8_3:-14166630 | None:intergenic |
| TGTTCTTATCCTGGTTAATC+AGG | 0.320790 | 8_3:+14169188 | None:intergenic |
| TTTCACTGGTTCAACTTTCT+GGG | 0.341276 | 8_3:-14166894 | Msa1278130:three_prime_UTR |
| CACAGTGACAAAAGGTTTGC+TGG | 0.351205 | 8_3:-14167610 | Msa1278130:CDS |
| TTGTGCCACTATGTCCTTGT+TGG | 0.354967 | 8_3:+14168221 | None:intergenic |
| GGGAAGAGTGAGAAGGAGCT+AGG | 0.370001 | 8_3:+14169694 | None:intergenic |
| TGTTGTACTTGTTCTTATCC+TGG | 0.370099 | 8_3:+14169179 | None:intergenic |
| GAGAGCACGGAATGGCCTCC+TGG | 0.371082 | 8_3:+14167808 | None:intergenic |
| CCGTGTCTTTGGTGCCTTGA+AGG | 0.376067 | 8_3:-14167750 | Msa1278130:intron |
| ACTACTGGAAACCGTGTCTT+TGG | 0.377680 | 8_3:-14167761 | Msa1278130:CDS |
| AATTCCTGATTTCATTAAAT+GGG | 0.379074 | 8_3:+14166626 | None:intergenic |
| TTTGAATTAGGTTTATGTTA+AGG | 0.401148 | 8_3:-14169400 | Msa1278130:intron |
| CTTAGCTTTCCGCTCCTCAT+AGG | 0.404551 | 8_3:+14167121 | None:intergenic |
| ATAGTGTCCGCTAGTATTGC+TGG | 0.407211 | 8_3:-14168198 | Msa1278130:CDS |
| GAATATCCAAACCACCATCT+AGG | 0.409965 | 8_3:+14167635 | None:intergenic |
| TCGGACAACAAATCGGTACT+TGG | 0.416359 | 8_3:+14169153 | None:intergenic |
| TTCTTCTCTTGAACTTGACT+TGG | 0.430059 | 8_3:+14169346 | None:intergenic |
| GCATCATACTGATGCATAAC+CGG | 0.433592 | 8_3:+14166661 | None:intergenic |
| TGAGATGGATGAGGAGTATG+AGG | 0.439950 | 8_3:-14167960 | Msa1278130:CDS |
| TTATTGCACTGGACTCCTCT+TGG | 0.442461 | 8_3:-14168005 | Msa1278130:CDS |
| GCTGGATCCGCAAGAGTTGA+TGG | 0.445523 | 8_3:+14169673 | None:intergenic |
| GGTTTACAGGGAGCCCTAGA+TGG | 0.454096 | 8_3:-14167649 | Msa1278130:intron |
| GGAAGAGTGAGAAGGAGCTA+GGG | 0.456723 | 8_3:+14169695 | None:intergenic |
| GTAACGCTTGAAGTAAGCCT+TGG | 0.458552 | 8_3:+14169368 | None:intergenic |
| ACCATTGTTGCAGACGCAGC+TGG | 0.464802 | 8_3:+14169655 | None:intergenic |
| GGTCTTGTTAAGACCACTAC+TGG | 0.466788 | 8_3:-14167776 | Msa1278130:CDS |
| GGGAGCCCTAGATGGTGGTT+TGG | 0.466900 | 8_3:-14167641 | Msa1278130:CDS |
| TCCAGCTGCGTCTGCAACAA+TGG | 0.469572 | 8_3:-14169656 | Msa1278130:intron |
| AATGGCCTCCTGGACTCAGC+TGG | 0.470728 | 8_3:+14167818 | None:intergenic |
| GTTGCCTGTACTGTTTATTG+AGG | 0.481118 | 8_3:-14166946 | Msa1278130:three_prime_UTR |
| CATAACTATAAGCTGACAAA+AGG | 0.482215 | 8_3:+14169123 | None:intergenic |
| CCACACTTTGGTCTTTCAGT+AGG | 0.491595 | 8_3:-14168138 | Msa1278130:CDS |
| ATTACAAGTTGGGCTTTCAC+TGG | 0.495721 | 8_3:-14166908 | Msa1278130:three_prime_UTR |
| TACCTGCAGCATAATTTGTA+AGG | 0.500398 | 8_3:+14168115 | None:intergenic |
| GTCAAGTTCAAGAGAAGAAG+AGG | 0.501877 | 8_3:-14169342 | Msa1278130:intron |
| GGCCTTACAAATTATGCTGC+AGG | 0.502530 | 8_3:-14168117 | Msa1278130:intron |
| TTCCGTGCTCTCCTCGATGT+TGG | 0.506031 | 8_3:-14167797 | Msa1278130:CDS |
| AGTTCTAGATATCCATCACT+TGG | 0.507334 | 8_3:+14167013 | None:intergenic |
| TGAGGAGCGGAAAGCTAAGT+TGG | 0.510748 | 8_3:-14167117 | Msa1278130:CDS |
| CAGTTGAGCCAGCTGAGTCC+AGG | 0.512028 | 8_3:-14167826 | Msa1278130:CDS |
| CGGACAACAAATCGGTACTT+GGG | 0.512041 | 8_3:+14169154 | None:intergenic |
| TCTGAAGAAGCTTACCTATG+AGG | 0.512591 | 8_3:-14167135 | Msa1278130:CDS |
| GCTGACAAAAGGATACAAAT+CGG | 0.518595 | 8_3:+14169134 | None:intergenic |
| ATACAAATCGGACAACAAAT+CGG | 0.520677 | 8_3:+14169146 | None:intergenic |
| ATATTCCTCACAGTGACAAA+AGG | 0.523020 | 8_3:-14167618 | Msa1278130:CDS |
| TCTCATGAGCTACCACACTT+TGG | 0.524328 | 8_3:-14168150 | Msa1278130:CDS |
| GAAGAAAGAGCTCGATGCTG+AGG | 0.526853 | 8_3:-14167575 | Msa1278130:CDS |
| ACAGTGACAAAAGGTTTGCT+GGG | 0.528756 | 8_3:-14167609 | Msa1278130:CDS |
| AATATCCAAACCACCATCTA+GGG | 0.535350 | 8_3:+14167636 | None:intergenic |
| TTAACCTCAATAAACAGTAC+AGG | 0.537908 | 8_3:+14166942 | None:intergenic |
| ATGTGACCAGCTTATTGCAC+TGG | 0.552187 | 8_3:-14168016 | Msa1278130:intron |
| AAAGACACGGTTTCCAGTAG+TGG | 0.561300 | 8_3:+14167763 | None:intergenic |
| TCGTATTCGCCTGATTAACC+AGG | 0.567348 | 8_3:-14169197 | Msa1278130:CDS |
| TGTTAAGGCTCAGAAATCCA+AGG | 0.572355 | 8_3:-14169385 | Msa1278130:CDS |
| TTACAGGGAGCCCTAGATGG+TGG | 0.573973 | 8_3:-14167646 | Msa1278130:intron |
| AGAAGGAGCTAGGGTTTGAG+AGG | 0.578267 | 8_3:+14169704 | None:intergenic |
| GACCAACATCGAGGAGAGCA+CGG | 0.579351 | 8_3:+14167795 | None:intergenic |
| CTGGATCCGCAAGAGTTGAT+GGG | 0.580297 | 8_3:+14169674 | None:intergenic |
| AAGTGTCTTCAGAACACGAC+GGG | 0.584750 | 8_3:+14167982 | None:intergenic |
| GAGATGGATGAGGAGTATGA+GGG | 0.586795 | 8_3:-14167959 | Msa1278130:CDS |
| AAGGTTTGCTGGGTTTGACA+AGG | 0.586996 | 8_3:-14167599 | Msa1278130:CDS |
| TGTGTTTGCAGCCCAAGTGA+TGG | 0.590338 | 8_3:-14167025 | Msa1278130:three_prime_UTR |
| GAAGACACTTGAGATGGATG+AGG | 0.597148 | 8_3:-14167969 | Msa1278130:CDS |
| ACTCTTCCCATCAACTCTTG+CGG | 0.601744 | 8_3:-14169680 | Msa1278130:five_prime_UTR |
| TAATGCTGCTGTTGATGATG+AGG | 0.605286 | 8_3:-14167075 | Msa1278130:CDS |
| CCTTCAAGGCACCAAAGACA+CGG | 0.609408 | 8_3:+14167750 | None:intergenic |
| GGACAACAAATCGGTACTTG+GGG | 0.611837 | 8_3:+14169155 | None:intergenic |
| TTGAGCCAGCTGAGTCCAGG+AGG | 0.614063 | 8_3:-14167823 | Msa1278130:CDS |
| TTAGACCAACAAGGACATAG+TGG | 0.621773 | 8_3:-14168226 | Msa1278130:intron |
| TGCTGTTGATGATGAGGACG+AGG | 0.625300 | 8_3:-14167069 | Msa1278130:CDS |
| GTTCTAGATATCCATCACTT+GGG | 0.629114 | 8_3:+14167014 | None:intergenic |
| AGTTGATGGGAAGAGTGAGA+AGG | 0.634670 | 8_3:+14169687 | None:intergenic |
| GGAGTATGAGGGAAATGTTG+AGG | 0.639543 | 8_3:-14167948 | Msa1278130:intron |
| TGTTCTGAAGACACTTGAGA+TGG | 0.640254 | 8_3:-14167975 | Msa1278130:CDS |
| TCAGAACACGACGGGCCAAG+AGG | 0.649699 | 8_3:+14167990 | None:intergenic |
| ACATCGAGGAGAGCACGGAA+TGG | 0.653230 | 8_3:+14167800 | None:intergenic |
| TAATCAGGCGAATACGAGCA+CGG | 0.680796 | 8_3:+14169203 | None:intergenic |
| AACTCCTTATTAGACCAACA+AGG | 0.684350 | 8_3:-14168235 | Msa1278130:intron |
| AGAAGCTTACCTATGAGGAG+CGG | 0.703780 | 8_3:-14167130 | Msa1278130:CDS |
| AATATCACCAGCAATACTAG+CGG | 0.722529 | 8_3:+14168191 | None:intergenic |
| CCTACTGAAAGACCAAAGTG+TGG | 0.729262 | 8_3:+14168138 | None:intergenic |
| GACAACAAATCGGTACTTGG+GGG | 0.739465 | 8_3:+14169156 | None:intergenic |
| TCTTAACAAGACCAACATCG+AGG | 0.768338 | 8_3:+14167786 | None:intergenic |
| CAAGTGTCTTCAGAACACGA+CGG | 0.780703 | 8_3:+14167981 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAATGTTGATTTTTTA+TGG | - | chr8_3:14167337-14167356 | Msa1278130:intron | 10.0% |
| !!! | TTGGAATAATTTTTTTTTAA+GGG | - | chr8_3:14169554-14169573 | Msa1278130:intron | 10.0% |
| !!! | TTTATAAAATTGTTTTGTTT+GGG | + | chr8_3:14169589-14169608 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATGTGATTTAAC+TGG | - | chr8_3:14167296-14167315 | Msa1278130:intron | 15.0% |
| !! | TTAAATTTAAATGAGAACAA+GGG | + | chr8_3:14168251-14168270 | None:intergenic | 15.0% |
| !! | TTTAAATTTAAATGAGAACA+AGG | + | chr8_3:14168252-14168271 | None:intergenic | 15.0% |
| !!! | GTTGGAATAATTTTTTTTTA+AGG | - | chr8_3:14169553-14169572 | Msa1278130:intron | 15.0% |
| !!! | GTTTATAAAATTGTTTTGTT+TGG | + | chr8_3:14169590-14169609 | None:intergenic | 15.0% |
| !! | TTTGAATTAGGTTTATGTTA+AGG | - | chr8_3:14166935-14166954 | Msa1278130:three_prime_UTR | 20.0% |
| !!! | TAAATAATCAGCATACATTT+TGG | + | chr8_3:14167077-14167096 | None:intergenic | 20.0% |
| !! | ATTACACAAAAAAACCAAAA+GGG | + | chr8_3:14167422-14167441 | None:intergenic | 20.0% |
| !! | AATTACACAAAAAAACCAAA+AGG | + | chr8_3:14167423-14167442 | None:intergenic | 20.0% |
| !!! | GTTTTTGATTAGCATTTTTA+TGG | - | chr8_3:14167444-14167463 | Msa1278130:intron | 20.0% |
| !! | TCAATTGTTAGAAATGTTAT+TGG | - | chr8_3:14167480-14167499 | Msa1278130:intron | 20.0% |
| !! | CAATTGTTAGAAATGTTATT+GGG | - | chr8_3:14167481-14167500 | Msa1278130:intron | 20.0% |
| !! | AATTGTTAGAAATGTTATTG+GGG | - | chr8_3:14167482-14167501 | Msa1278130:intron | 20.0% |
| !!! | TTATTTGTTGATTTTGTTAG+TGG | - | chr8_3:14167853-14167872 | Msa1278130:intron | 20.0% |
| !! | TAAGCTATCAAAAAGTTATA+AGG | + | chr8_3:14167974-14167993 | None:intergenic | 20.0% |
| !!! | TTAGTTTAATCCTTTTAAAC+AGG | - | chr8_3:14168468-14168487 | Msa1278130:intron | 20.0% |
| !! | GATTCTAGTATGAAATAAAA+GGG | + | chr8_3:14169106-14169125 | None:intergenic | 20.0% |
| !! | AGATTCTAGTATGAAATAAA+AGG | + | chr8_3:14169107-14169126 | None:intergenic | 20.0% |
| !! | GCATGTAATAAATAATACTA+AGG | + | chr8_3:14169134-14169153 | None:intergenic | 20.0% |
| !!! | TTTATTTGTTAATCTTGTGT+AGG | - | chr8_3:14169172-14169191 | Msa1278130:CDS | 20.0% |
| !!! | GTTTATTGAGGTTAAAATTT+TGG | - | chr8_3:14169401-14169420 | Msa1278130:intron | 20.0% |
| !!! | AATTTTGGATAATTACAAGT+TGG | - | chr8_3:14169416-14169435 | Msa1278130:intron | 20.0% |
| !!! | ATTTTGGATAATTACAAGTT+GGG | - | chr8_3:14169417-14169436 | Msa1278130:intron | 20.0% |
| ! | GATCTAAGAAATTAAAGCTA+TGG | + | chr8_3:14166744-14166763 | None:intergenic | 25.0% |
| !!! | GTTGTTGTGTTTTTTGAATT+AGG | - | chr8_3:14166923-14166942 | Msa1278130:three_prime_UTR | 25.0% |
| ! | ATTGTTAGAAATGTTATTGG+GGG | - | chr8_3:14167483-14167502 | Msa1278130:intron | 25.0% |
| !!! | CTTTGAGATAAAAACCAAAA+GGG | + | chr8_3:14167521-14167540 | None:intergenic | 25.0% |
| !!! | TCTTTGAGATAAAAACCAAA+AGG | + | chr8_3:14167522-14167541 | None:intergenic | 25.0% |
| ! | TAATTGTTAGAAATGCTAGT+CGG | - | chr8_3:14167614-14167633 | Msa1278130:CDS | 25.0% |
| ! | TATAATTATCTCACATAACC+AGG | + | chr8_3:14167691-14167710 | None:intergenic | 25.0% |
| ! | AATTGTTTGTAATGCTAGTT+TGG | - | chr8_3:14167891-14167910 | Msa1278130:intron | 25.0% |
| ! | CAAAAAGTTATAAGGTGATT+TGG | + | chr8_3:14167966-14167985 | None:intergenic | 25.0% |
| !! | CTATTGTTAGTTGTTATTGT+TGG | - | chr8_3:14168053-14168072 | Msa1278130:intron | 25.0% |
| !!! | TAATGTTTTTAGTACCTTCA+AGG | + | chr8_3:14168602-14168621 | None:intergenic | 25.0% |
| !!! | GTTGATTTGAATATTTGTGA+TGG | - | chr8_3:14168665-14168684 | Msa1278130:intron | 25.0% |
| ! | AATATTTGTGATGGTTTACA+GGG | - | chr8_3:14168674-14168693 | Msa1278130:intron | 25.0% |
| ! | TTTAGTGAATACATCAAGAA+AGG | - | chr8_3:14168963-14168982 | Msa1278130:intron | 25.0% |
| ! | TTCTCTGATTTCTTAATTGT+AGG | + | chr8_3:14169050-14169069 | None:intergenic | 25.0% |
| !!! | CCTTTACTTTTTTTGTTAGT+CGG | - | chr8_3:14169504-14169523 | Msa1278130:intron | 25.0% |
| AATGAAGAGAAAATGGAAGA+GGG | + | chr8_3:14166712-14166731 | None:intergenic | 30.0% | |
| AAATGAAGAGAAAATGGAAG+AGG | + | chr8_3:14166713-14166732 | None:intergenic | 30.0% | |
| GAAACGAAATGAAGAGAAAA+TGG | + | chr8_3:14166719-14166738 | None:intergenic | 30.0% | |
| ! | AACTTCTTTTGTGTCGTATA+TGG | - | chr8_3:14166868-14166887 | Msa1278130:three_prime_UTR | 30.0% |
| ! | ACTTCTTTTGTGTCGTATAT+GGG | - | chr8_3:14166869-14166888 | Msa1278130:three_prime_UTR | 30.0% |
| ATACAAATCGGACAACAAAT+CGG | + | chr8_3:14167192-14167211 | None:intergenic | 30.0% | |
| CATAACTATAAGCTGACAAA+AGG | + | chr8_3:14167215-14167234 | None:intergenic | 30.0% | |
| ! | TATGATTTTCATTGATGCAC+TGG | - | chr8_3:14167231-14167250 | Msa1278130:intron | 30.0% |
| GATAAAAACCAAAAGGGTTA+AGG | + | chr8_3:14167515-14167534 | None:intergenic | 30.0% | |
| ! | AATTGATCGTTGCATTTTTG+TGG | - | chr8_3:14167577-14167596 | Msa1278130:CDS | 30.0% |
| AATTGTTAGAAATGCTAGTC+GGG | - | chr8_3:14167615-14167634 | Msa1278130:CDS | 30.0% | |
| GAAGATGATGAAAACCAAAA+GGG | + | chr8_3:14167660-14167679 | None:intergenic | 30.0% | |
| AATTGTTAGAAATGCTAGTG+AGG | - | chr8_3:14167763-14167782 | Msa1278130:CDS | 30.0% | |
| ATTGTTAGAAATGCTAGTGA+GGG | - | chr8_3:14167764-14167783 | Msa1278130:CDS | 30.0% | |
| AGAAAAAACCAAAAGGATTG+TGG | + | chr8_3:14167799-14167818 | None:intergenic | 30.0% | |
| !!! | TCCTTTTGGTTTTTTCTTCA+AGG | - | chr8_3:14167802-14167821 | Msa1278130:CDS | 30.0% |
| TCCTTGAAGAAAAAACCAAA+AGG | + | chr8_3:14167806-14167825 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTTCAAGGAAGACA+TGG | - | chr8_3:14167811-14167830 | Msa1278130:CDS | 30.0% |
| ! | TATAAGGTGATTTGGAAAGA+GGG | + | chr8_3:14167958-14167977 | None:intergenic | 30.0% |
| ! | TTATAAGGTGATTTGGAAAG+AGG | + | chr8_3:14167959-14167978 | None:intergenic | 30.0% |
| GAATATTTGTGATGGTTTAC+AGG | - | chr8_3:14168673-14168692 | Msa1278130:intron | 30.0% | |
| ATACATCAAGAAAGGAATTG+AGG | - | chr8_3:14168971-14168990 | Msa1278130:intron | 30.0% | |
| AATTAAGAAATCAGAGAAGC+AGG | - | chr8_3:14169052-14169071 | Msa1278130:intron | 30.0% | |
| !!! | AAATACCTCTTGTGTTGTTT+TGG | + | chr8_3:14169080-14169099 | None:intergenic | 30.0% |
| TTAACCTCAATAAACAGTAC+AGG | + | chr8_3:14169396-14169415 | None:intergenic | 30.0% | |
| CCGACTAACAAAAAAAGTAA+AGG | + | chr8_3:14169507-14169526 | None:intergenic | 30.0% | |
| TTCTTTGATGTGTTTCTTGT+TGG | - | chr8_3:14169535-14169554 | Msa1278130:intron | 30.0% | |
| AAAAACAATGTGAAGAGTTC+CGG | - | chr8_3:14169655-14169674 | Msa1278130:intron | 30.0% | |
| TTCTTCTCTTGAACTTGACT+TGG | + | chr8_3:14166992-14167011 | None:intergenic | 35.0% | |
| TGTTCTTATCCTGGTTAATC+AGG | + | chr8_3:14167150-14167169 | None:intergenic | 35.0% | |
| TGTTGTACTTGTTCTTATCC+TGG | + | chr8_3:14167159-14167178 | None:intergenic | 35.0% | |
| GCTGACAAAAGGATACAAAT+CGG | + | chr8_3:14167204-14167223 | None:intergenic | 35.0% | |
| CAAAAAAACCAAAAGGGTTG+TGG | + | chr8_3:14167416-14167435 | None:intergenic | 35.0% | |
| GGAAGATGATGAAAACCAAA+AGG | + | chr8_3:14167661-14167680 | None:intergenic | 35.0% | |
| TTGTTAGAAATGCTAGTGAG+GGG | - | chr8_3:14167765-14167784 | Msa1278130:CDS | 35.0% | |
| ! | AGTTGAATCCACAATCCTTT+TGG | - | chr8_3:14167788-14167807 | Msa1278130:CDS | 35.0% |
| ! | ATATGAGTTGGAGGGATTAA+AGG | + | chr8_3:14167933-14167952 | None:intergenic | 35.0% |
| AACTCCTTATTAGACCAACA+AGG | - | chr8_3:14168100-14168119 | Msa1278130:intron | 35.0% | |
| ! | ATGTCCTTGTTGGTCTAATA+AGG | + | chr8_3:14168107-14168126 | None:intergenic | 35.0% |
| AATATCACCAGCAATACTAG+CGG | + | chr8_3:14168147-14168166 | None:intergenic | 35.0% | |
| ! | TACCTGCAGCATAATTTGTA+AGG | + | chr8_3:14168223-14168242 | None:intergenic | 35.0% |
| ! | AATCCTTTTAAACAGGCTAC+TGG | - | chr8_3:14168475-14168494 | Msa1278130:intron | 35.0% |
| AATATCCAAACCACCATCTA+GGG | + | chr8_3:14168702-14168721 | None:intergenic | 35.0% | |
| ATATTCCTCACAGTGACAAA+AGG | - | chr8_3:14168717-14168736 | Msa1278130:intron | 35.0% | |
| TTCACCGCAAGTATATCTTT+GGG | - | chr8_3:14168783-14168802 | Msa1278130:intron | 35.0% | |
| TGTATTCACTAAAGTGAGTC+TGG | + | chr8_3:14168956-14168975 | None:intergenic | 35.0% | |
| ! | GTTCTAGATATCCATCACTT+GGG | + | chr8_3:14169324-14169343 | None:intergenic | 35.0% |
| !! | AGTTCTAGATATCCATCACT+TGG | + | chr8_3:14169325-14169344 | None:intergenic | 35.0% |
| !! | TTTCACTGGTTCAACTTTCT+GGG | - | chr8_3:14169441-14169460 | Msa1278130:intron | 35.0% |
| TGTTAAGGCTCAGAAATCCA+AGG | - | chr8_3:14166950-14166969 | Msa1278130:three_prime_UTR | 40.0% | |
| GTCAAGTTCAAGAGAAGAAG+AGG | - | chr8_3:14166993-14167012 | Msa1278130:three_prime_UTR | 40.0% | |
| ATTCGATGATGAATCTGCAG+AGG | - | chr8_3:14167096-14167115 | Msa1278130:CDS | 40.0% | |
| TTCGATGATGAATCTGCAGA+GGG | - | chr8_3:14167097-14167116 | Msa1278130:CDS | 40.0% | |
| AATGCTACTGTATGCTACTG+TGG | - | chr8_3:14167381-14167400 | Msa1278130:intron | 40.0% | |
| ATGCTACTGTATGCTACTGT+GGG | - | chr8_3:14167382-14167401 | Msa1278130:intron | 40.0% | |
| ! | AGTTGAATCCACAACCCTTT+TGG | - | chr8_3:14167405-14167424 | Msa1278130:intron | 40.0% |
| ! | GGTTGAATCCTTAACCCTTT+TGG | - | chr8_3:14167504-14167523 | Msa1278130:intron | 40.0% |
| TTAGACCAACAAGGACATAG+TGG | - | chr8_3:14168109-14168128 | Msa1278130:intron | 40.0% | |
| !! | TGTTCTGAAGACACTTGAGA+TGG | - | chr8_3:14168360-14168379 | Msa1278130:intron | 40.0% |
| GCAAAGAACAGTGTCTAGAT+AGG | + | chr8_3:14168441-14168460 | None:intergenic | 40.0% | |
| TCTCCAGTAGCCTGTTTAAA+AGG | + | chr8_3:14168481-14168500 | None:intergenic | 40.0% | |
| ! | TTTTAAACAGGCTACTGGAG+AGG | - | chr8_3:14168480-14168499 | Msa1278130:intron | 40.0% |
| TCTTAACAAGACCAACATCG+AGG | + | chr8_3:14168552-14168571 | None:intergenic | 40.0% | |
| GAATATCCAAACCACCATCT+AGG | + | chr8_3:14168703-14168722 | None:intergenic | 40.0% | |
| ! | ACAGTGACAAAAGGTTTGCT+GGG | - | chr8_3:14168726-14168745 | Msa1278130:intron | 40.0% |
| GTTCACCGCAAGTATATCTT+TGG | - | chr8_3:14168782-14168801 | Msa1278130:intron | 40.0% | |
| TCACCGCAAGTATATCTTTG+GGG | - | chr8_3:14168784-14168803 | Msa1278130:intron | 40.0% | |
| ACATGTTGCTGCATACATGA+AGG | - | chr8_3:14168808-14168827 | Msa1278130:intron | 40.0% | |
| ! | AAGTGAGTCTGGAATTTCTC+AGG | + | chr8_3:14168945-14168964 | None:intergenic | 40.0% |
| AAGAAAGGAATTGAGGCAGA+TGG | - | chr8_3:14168978-14168997 | Msa1278130:intron | 40.0% | |
| TCTGAAGAAGCTTACCTATG+AGG | - | chr8_3:14169200-14169219 | Msa1278130:CDS | 40.0% | |
| !! | TAATGCTGCTGTTGATGATG+AGG | - | chr8_3:14169260-14169279 | Msa1278130:intron | 40.0% |
| GTTGCCTGTACTGTTTATTG+AGG | - | chr8_3:14169389-14169408 | Msa1278130:CDS | 40.0% | |
| ! | ATTACAAGTTGGGCTTTCAC+TGG | - | chr8_3:14169427-14169446 | Msa1278130:intron | 40.0% |
| !! | CTTTCACTGGTTCAACTTTC+TGG | - | chr8_3:14169440-14169459 | Msa1278130:intron | 40.0% |
| GCATCATACTGATGCATAAC+CGG | + | chr8_3:14169677-14169696 | None:intergenic | 40.0% | |
| !! | AGTTGATGGGAAGAGTGAGA+AGG | + | chr8_3:14166651-14166670 | None:intergenic | 45.0% |
| ACTCTTCCCATCAACTCTTG+CGG | - | chr8_3:14166655-14166674 | Msa1278130:three_prime_UTR | 45.0% | |
| GTAACGCTTGAAGTAAGCCT+TGG | + | chr8_3:14166970-14166989 | None:intergenic | 45.0% | |
| TAATCAGGCGAATACGAGCA+CGG | + | chr8_3:14167135-14167154 | None:intergenic | 45.0% | |
| TCGTATTCGCCTGATTAACC+AGG | - | chr8_3:14167138-14167157 | Msa1278130:CDS | 45.0% | |
| GACAACAAATCGGTACTTGG+GGG | + | chr8_3:14167182-14167201 | None:intergenic | 45.0% | |
| GGACAACAAATCGGTACTTG+GGG | + | chr8_3:14167183-14167202 | None:intergenic | 45.0% | |
| CGGACAACAAATCGGTACTT+GGG | + | chr8_3:14167184-14167203 | None:intergenic | 45.0% | |
| TCGGACAACAAATCGGTACT+TGG | + | chr8_3:14167185-14167204 | None:intergenic | 45.0% | |
| !! | TAGTCGGGTTGAATCCACAA+CGG | - | chr8_3:14167630-14167649 | Msa1278130:CDS | 45.0% |
| CATCATCTTCCATGAAGACC+TGG | - | chr8_3:14167670-14167689 | Msa1278130:intron | 45.0% | |
| CTCACATAACCAGGTCTTCA+TGG | + | chr8_3:14167682-14167701 | None:intergenic | 45.0% | |
| ! | AGAGGGACATATGAGTTGGA+GGG | + | chr8_3:14167941-14167960 | None:intergenic | 45.0% |
| ! | AAGAGGGACATATGAGTTGG+AGG | + | chr8_3:14167942-14167961 | None:intergenic | 45.0% |
| GGAAAGAGGGACATATGAGT+TGG | + | chr8_3:14167945-14167964 | None:intergenic | 45.0% | |
| ! | TTGTGCCACTATGTCCTTGT+TGG | + | chr8_3:14168117-14168136 | None:intergenic | 45.0% |
| ATAGTGTCCGCTAGTATTGC+TGG | - | chr8_3:14168137-14168156 | Msa1278130:CDS | 45.0% | |
| TCTCATGAGCTACCACACTT+TGG | - | chr8_3:14168185-14168204 | Msa1278130:CDS | 45.0% | |
| CCTACTGAAAGACCAAAGTG+TGG | + | chr8_3:14168200-14168219 | None:intergenic | 45.0% | |
| ! | CCACACTTTGGTCTTTCAGT+AGG | - | chr8_3:14168197-14168216 | Msa1278130:CDS | 45.0% |
| GGCCTTACAAATTATGCTGC+AGG | - | chr8_3:14168218-14168237 | Msa1278130:CDS | 45.0% | |
| ATGTGACCAGCTTATTGCAC+TGG | - | chr8_3:14168319-14168338 | Msa1278130:intron | 45.0% | |
| TTATTGCACTGGACTCCTCT+TGG | - | chr8_3:14168330-14168349 | Msa1278130:intron | 45.0% | |
| AAGTGTCTTCAGAACACGAC+GGG | + | chr8_3:14168356-14168375 | None:intergenic | 45.0% | |
| CAAGTGTCTTCAGAACACGA+CGG | + | chr8_3:14168357-14168376 | None:intergenic | 45.0% | |
| GAAGACACTTGAGATGGATG+AGG | - | chr8_3:14168366-14168385 | Msa1278130:intron | 45.0% | |
| ! | TGAGATGGATGAGGAGTATG+AGG | - | chr8_3:14168375-14168394 | Msa1278130:intron | 45.0% |
| ! | GAGATGGATGAGGAGTATGA+GGG | - | chr8_3:14168376-14168395 | Msa1278130:intron | 45.0% |
| GGAGTATGAGGGAAATGTTG+AGG | - | chr8_3:14168387-14168406 | Msa1278130:intron | 45.0% | |
| !! | GGTCTTGTTAAGACCACTAC+TGG | - | chr8_3:14168559-14168578 | Msa1278130:intron | 45.0% |
| AAAGACACGGTTTCCAGTAG+TGG | + | chr8_3:14168575-14168594 | None:intergenic | 45.0% | |
| ACTACTGGAAACCGTGTCTT+TGG | - | chr8_3:14168574-14168593 | Msa1278130:intron | 45.0% | |
| ! | GCAAACCTTTTGTCACTGTG+AGG | + | chr8_3:14168725-14168744 | None:intergenic | 45.0% |
| CACAGTGACAAAAGGTTTGC+TGG | - | chr8_3:14168725-14168744 | Msa1278130:intron | 45.0% | |
| !! | AAGGTTTGCTGGGTTTGACA+AGG | - | chr8_3:14168736-14168755 | Msa1278130:intron | 45.0% |
| CACCGCAAGTATATCTTTGG+GGG | - | chr8_3:14168785-14168804 | Msa1278130:intron | 45.0% | |
| GTCCCCCAAAGATATACTTG+CGG | + | chr8_3:14168790-14168809 | None:intergenic | 45.0% | |
| AGGCTCCAAAACAACACAAG+AGG | - | chr8_3:14169072-14169091 | Msa1278130:intron | 45.0% | |
| AGAAGCTTACCTATGAGGAG+CGG | - | chr8_3:14169205-14169224 | Msa1278130:CDS | 45.0% | |
| AGAAGGAGCTAGGGTTTGAG+AGG | + | chr8_3:14166634-14166653 | None:intergenic | 50.0% | |
| GGAAGAGTGAGAAGGAGCTA+GGG | + | chr8_3:14166643-14166662 | None:intergenic | 50.0% | |
| ! | CTGGATCCGCAAGAGTTGAT+GGG | + | chr8_3:14166664-14166683 | None:intergenic | 50.0% |
| ! | TCCACAACGGACAACCCTTT+TGG | - | chr8_3:14167643-14167662 | Msa1278130:CDS | 50.0% |
| ACCAAAAGGGTTGTCCGTTG+TGG | + | chr8_3:14167647-14167666 | None:intergenic | 50.0% | |
| AGGAGTCCAGTGCAATAAGC+TGG | + | chr8_3:14168328-14168347 | None:intergenic | 50.0% | |
| ! | CCTTCAAGGCACCAAAGACA+CGG | + | chr8_3:14168588-14168607 | None:intergenic | 50.0% |
| GAAGAAAGAGCTCGATGCTG+AGG | - | chr8_3:14168760-14168779 | Msa1278130:intron | 50.0% | |
| CTCAGGCTCATCTTCAGTCA+AGG | + | chr8_3:14168928-14168947 | None:intergenic | 50.0% | |
| ! | AATTGAGGCAGATGGCCTTG+AGG | - | chr8_3:14168986-14169005 | Msa1278130:intron | 50.0% |
| CCTTCTTGTACAGCTCCTCA+AGG | + | chr8_3:14169004-14169023 | None:intergenic | 50.0% | |
| CCTTGAGGAGCTGTACAAGA+AGG | - | chr8_3:14169001-14169020 | Msa1278130:intron | 50.0% | |
| ! | CTTAGCTTTCCGCTCCTCAT+AGG | + | chr8_3:14169217-14169236 | None:intergenic | 50.0% |
| TGAGGAGCGGAAAGCTAAGT+TGG | - | chr8_3:14169218-14169237 | Msa1278130:CDS | 50.0% | |
| !! | TGCTGTTGATGATGAGGACG+AGG | - | chr8_3:14169266-14169285 | Msa1278130:intron | 50.0% |
| TGTGTTTGCAGCCCAAGTGA+TGG | - | chr8_3:14169310-14169329 | Msa1278130:intron | 50.0% | |
| GGGAAGAGTGAGAAGGAGCT+AGG | + | chr8_3:14166644-14166663 | None:intergenic | 55.0% | |
| GCTGGATCCGCAAGAGTTGA+TGG | + | chr8_3:14166665-14166684 | None:intergenic | 55.0% | |
| TCCAGCTGCGTCTGCAACAA+TGG | - | chr8_3:14166679-14166698 | Msa1278130:intron | 55.0% | |
| ACCATTGTTGCAGACGCAGC+TGG | + | chr8_3:14166683-14166702 | None:intergenic | 55.0% | |
| ! | ACATCGAGGAGAGCACGGAA+TGG | + | chr8_3:14168538-14168557 | None:intergenic | 55.0% |
| TTCCGTGCTCTCCTCGATGT+TGG | - | chr8_3:14168538-14168557 | Msa1278130:intron | 55.0% | |
| GACCAACATCGAGGAGAGCA+CGG | + | chr8_3:14168543-14168562 | None:intergenic | 55.0% | |
| !! | CCGTGTCTTTGGTGCCTTGA+AGG | - | chr8_3:14168585-14168604 | Msa1278130:intron | 55.0% |
| GGTTTACAGGGAGCCCTAGA+TGG | - | chr8_3:14168686-14168705 | Msa1278130:intron | 55.0% | |
| TTACAGGGAGCCCTAGATGG+TGG | - | chr8_3:14168689-14168708 | Msa1278130:intron | 55.0% | |
| GATCAGCACGAATTGCAGCG+TGG | + | chr8_3:14169028-14169047 | None:intergenic | 55.0% | |
| TCAGAACACGACGGGCCAAG+AGG | + | chr8_3:14168348-14168367 | None:intergenic | 60.0% | |
| CAGTTGAGCCAGCTGAGTCC+AGG | - | chr8_3:14168509-14168528 | Msa1278130:intron | 60.0% | |
| TTGAGCCAGCTGAGTCCAGG+AGG | - | chr8_3:14168512-14168531 | Msa1278130:intron | 60.0% | |
| AATGGCCTCCTGGACTCAGC+TGG | + | chr8_3:14168520-14168539 | None:intergenic | 60.0% | |
| ! | GGGAGCCCTAGATGGTGGTT+TGG | - | chr8_3:14168694-14168713 | Msa1278130:intron | 60.0% |
| ! | GAGAGCACGGAATGGCCTCC+TGG | + | chr8_3:14168530-14168549 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 14166631 | 14169726 | 14166631 | ID=Msa1278130;Name=Msa1278130 |
| chr8_3 | mRNA | 14166631 | 14169726 | 14166631 | ID=Msa1278130-mRNA-1;Parent=Msa1278130;Name=Msa1278130-mRNA-1;_AED=0.11;_eAED=0.11;_QI=67|0.75|0.77|1|0.75|0.66|9|393|246 |
| chr8_3 | exon | 14166631 | 14166685 | 14166631 | ID=Msa1278130-mRNA-1:exon:5580;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14166717 | 14167163 | 14166717 | ID=Msa1278130-mRNA-1:exon:5579;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14167565 | 14167662 | 14167565 | ID=Msa1278130-mRNA-1:exon:5578;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14167751 | 14167867 | 14167751 | ID=Msa1278130-mRNA-1:exon:5577;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14167949 | 14168028 | 14167949 | ID=Msa1278130-mRNA-1:exon:5576;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14168118 | 14168244 | 14168118 | ID=Msa1278130-mRNA-1:exon:5575;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14169105 | 14169241 | 14169105 | ID=Msa1278130-mRNA-1:exon:5574;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14169343 | 14169412 | 14169343 | ID=Msa1278130-mRNA-1:exon:5573;Parent=Msa1278130-mRNA-1 |
| chr8_3 | exon | 14169657 | 14169726 | 14169657 | ID=Msa1278130-mRNA-1:exon:5572;Parent=Msa1278130-mRNA-1 |
| chr8_3 | five_prime_UTR | 14169660 | 14169726 | 14169660 | ID=Msa1278130-mRNA-1:five_prime_utr;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14169657 | 14169659 | 14169657 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14169343 | 14169412 | 14169343 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14169105 | 14169241 | 14169105 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14168118 | 14168244 | 14168118 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14167949 | 14168028 | 14167949 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14167751 | 14167867 | 14167751 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14167565 | 14167662 | 14167565 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | CDS | 14167055 | 14167163 | 14167055 | ID=Msa1278130-mRNA-1:cds;Parent=Msa1278130-mRNA-1 |
| chr8_3 | three_prime_UTR | 14166717 | 14167054 | 14166717 | ID=Msa1278130-mRNA-1:three_prime_utr;Parent=Msa1278130-mRNA-1 |
| chr8_3 | three_prime_UTR | 14166631 | 14166685 | 14166631 | ID=Msa1278130-mRNA-1:three_prime_utr;Parent=Msa1278130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
