Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078980 | XP_003625582.1 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 5.13e-97 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078980 | sp|P49201|RS232_ARATH | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.03e-97 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078980 | B7FHD2 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 2.45e-97 | 285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1078980 | 0.836855 | 7.326597e-57 | -8.615850e-47 |
| Msa0002790 | Msa1078980 | 0.831035 | 2.096909e-55 | -8.615850e-47 |
| Msa0021320 | Msa1078980 | 0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa0032780 | Msa1078980 | 0.836789 | 7.613984e-57 | -8.615850e-47 |
| Msa0040220 | Msa1078980 | 0.827373 | 1.622024e-54 | -8.615850e-47 |
| Msa0042480 | Msa1078980 | 0.823383 | 1.427039e-53 | -8.615850e-47 |
| Msa0044890 | Msa1078980 | 0.825937 | 3.570381e-54 | -8.615850e-47 |
| Msa0068970 | Msa1078980 | 0.825127 | 5.553570e-54 | -8.615850e-47 |
| Msa0079590 | Msa1078980 | 0.821934 | 3.100165e-53 | -8.615850e-47 |
| Msa0087910 | Msa1078980 | 0.848528 | 5.788784e-60 | -8.615850e-47 |
| Msa0090580 | Msa1078980 | 0.803802 | 2.929899e-49 | -8.615850e-47 |
| Msa0114570 | Msa1078980 | 0.804251 | 2.362411e-49 | -8.615850e-47 |
| Msa0116670 | Msa1078980 | 0.834963 | 2.211039e-56 | -8.615850e-47 |
| Msa0605890 | Msa1078980 | 0.810365 | 1.195344e-50 | -8.615850e-47 |
| Msa0622230 | Msa1078980 | 0.800654 | 1.302006e-48 | -8.615850e-47 |
| Msa0653060 | Msa1078980 | 0.834975 | 2.196546e-56 | -8.615850e-47 |
| Msa0712610 | Msa1078980 | 0.805175 | 1.515727e-49 | -8.615850e-47 |
| Msa0717380 | Msa1078980 | 0.832677 | 8.245360e-56 | -8.615850e-47 |
| Msa0749000 | Msa1078980 | 0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa0752910 | Msa1078980 | 0.828647 | 8.003055e-55 | -8.615850e-47 |
| Msa0781080 | Msa1078980 | 0.827565 | 1.458260e-54 | -8.615850e-47 |
| Msa0783630 | Msa1078980 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
| Msa0788380 | Msa1078980 | 0.816716 | 4.790523e-52 | -8.615850e-47 |
| Msa0799830 | Msa1078980 | 0.824739 | 6.856002e-54 | -8.615850e-47 |
| Msa0128750 | Msa1078980 | 0.803138 | 4.021890e-49 | -8.615850e-47 |
| Msa0129660 | Msa1078980 | 0.837630 | 4.641383e-57 | -8.615850e-47 |
| Msa0133540 | Msa1078980 | 0.814522 | 1.475876e-51 | -8.615850e-47 |
| Msa0134580 | Msa1078980 | 0.826167 | 3.146861e-54 | -8.615850e-47 |
| Msa0172900 | Msa1078980 | 0.802974 | 4.347974e-49 | -8.615850e-47 |
| Msa0172930 | Msa1078980 | 0.824032 | 1.005184e-53 | -8.615850e-47 |
| Msa0173530 | Msa1078980 | 0.836351 | 9.845734e-57 | -8.615850e-47 |
| Msa0181490 | Msa1078980 | 0.814355 | 1.607283e-51 | -8.615850e-47 |
| Msa0183090 | Msa1078980 | 0.822943 | 1.807001e-53 | -8.615850e-47 |
| Msa0186740 | Msa1078980 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa0189700 | Msa1078980 | 0.812115 | 4.985600e-51 | -8.615850e-47 |
| Msa0191450 | Msa1078980 | 0.816147 | 6.424005e-52 | -8.615850e-47 |
| Msa0191550 | Msa1078980 | 0.836881 | 7.213600e-57 | -8.615850e-47 |
| Msa0194940 | Msa1078980 | 0.881119 | 3.128603e-70 | -8.615850e-47 |
| Msa0210330 | Msa1078980 | 0.815331 | 9.764644e-52 | -8.615850e-47 |
| Msa0210360 | Msa1078980 | 0.872791 | 2.423775e-67 | -8.615850e-47 |
| Msa0219120 | Msa1078980 | 0.808100 | 3.655332e-50 | -8.615850e-47 |
| Msa0222730 | Msa1078980 | 0.840662 | 7.595723e-58 | -8.615850e-47 |
| Msa0230490 | Msa1078980 | 0.806547 | 7.800095e-50 | -8.615850e-47 |
| Msa0232010 | Msa1078980 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
| Msa0235050 | Msa1078980 | 0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa0369410 | Msa1078980 | 0.816138 | 6.453209e-52 | -8.615850e-47 |
| Msa0426090 | Msa1078980 | 0.839123 | 1.912314e-57 | -8.615850e-47 |
| Msa0426250 | Msa1078980 | 0.859528 | 3.887092e-63 | -8.615850e-47 |
| Msa0463520 | Msa1078980 | 0.825051 | 5.785921e-54 | -8.615850e-47 |
| Msa0471880 | Msa1078980 | 0.820607 | 6.273799e-53 | -8.615850e-47 |
| Msa0472480 | Msa1078980 | 0.825879 | 3.684860e-54 | -8.615850e-47 |
| Msa0475810 | Msa1078980 | 0.829554 | 4.824267e-55 | -8.615850e-47 |
| Msa0481520 | Msa1078980 | 0.810712 | 1.005539e-50 | -8.615850e-47 |
| Msa0481850 | Msa1078980 | 0.849853 | 2.477192e-60 | -8.615850e-47 |
| Msa1010310 | Msa1078980 | 0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa1037290 | Msa1078980 | 0.900748 | 5.366846e-78 | -8.615850e-47 |
| Msa1040160 | Msa1078980 | 0.893790 | 4.526623e-75 | -8.615850e-47 |
| Msa1041680 | Msa1078980 | 0.841326 | 5.085344e-58 | -8.615850e-47 |
| Msa1078870 | Msa1078980 | 0.974118 | 1.349779e-137 | -8.615850e-47 |
| Msa1078980 | Msa1079920 | 0.805269 | 1.448246e-49 | -8.615850e-47 |
| Msa1078980 | Msa1080350 | 0.860756 | 1.654751e-63 | -8.615850e-47 |
| Msa1078980 | Msa1083370 | 0.852941 | 3.317282e-61 | -8.615850e-47 |
| Msa1078980 | Msa1089220 | 0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa1078980 | Msa1091290 | 0.810316 | 1.224874e-50 | -8.615850e-47 |
| Msa1078980 | Msa1094380 | 0.830095 | 3.560634e-55 | -8.615850e-47 |
| Msa1078980 | Msa1096900 | 0.807418 | 5.104969e-50 | -8.615850e-47 |
| Msa1078980 | Msa1124850 | 0.820049 | 8.422683e-53 | -8.615850e-47 |
| Msa1078980 | Msa1125860 | 0.855723 | 5.209997e-62 | -8.615850e-47 |
| Msa1078980 | Msa1126060 | 0.858597 | 7.385918e-63 | -8.615850e-47 |
| Msa1078980 | Msa1126520 | 0.807699 | 4.450179e-50 | -8.615850e-47 |
| Msa1078980 | Msa1128120 | 0.841570 | 4.385041e-58 | -8.615850e-47 |
| Msa1078980 | Msa1164150 | 0.875654 | 2.598966e-68 | -8.615850e-47 |
| Msa1078980 | Msa1166570 | 0.837334 | 5.528000e-57 | -8.615850e-47 |
| Msa1078980 | Msa1167540 | 0.850426 | 1.711675e-60 | -8.615850e-47 |
| Msa1078980 | Msa1169180 | 0.993421 | 1.290101e-199 | -8.615850e-47 |
| Msa1078980 | Msa1203560 | 0.830933 | 2.221303e-55 | -8.615850e-47 |
| Msa1078980 | Msa1208330 | 0.843887 | 1.063002e-58 | -8.615850e-47 |
| Msa1078980 | Msa1215820 | 0.844630 | 6.712525e-59 | -8.615850e-47 |
| Msa1078980 | Msa1256840 | 0.818440 | 1.957618e-52 | -8.615850e-47 |
| Msa1078980 | Msa1273340 | 0.820041 | 8.456291e-53 | -8.615850e-47 |
| Msa1078980 | Msa1278130 | 0.809002 | 2.346360e-50 | -8.615850e-47 |
| Msa1078980 | Msa1295150 | 0.808843 | 2.537174e-50 | -8.615850e-47 |
| Msa1078980 | Msa1299590 | 0.814496 | 1.495895e-51 | -8.615850e-47 |
| Msa1078980 | Msa1311400 | 0.902276 | 1.143567e-78 | -8.615850e-47 |
| Msa1078980 | Msa1330730 | 0.807782 | 4.272820e-50 | -8.615850e-47 |
| Msa1078980 | Msa1332250 | 0.901808 | 1.842275e-78 | -8.615850e-47 |
| Msa1078980 | Msa1338190 | 0.819636 | 1.046834e-52 | -8.615850e-47 |
| Msa1078980 | Msa1343260 | 0.832128 | 1.127810e-55 | -8.615850e-47 |
| Msa1078980 | Msa1356790 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa1078980 | Msa1362790 | 0.827580 | 1.446130e-54 | -8.615850e-47 |
| Msa1078980 | Msa1368920 | 0.899479 | 1.903016e-77 | -8.615850e-47 |
| Msa1078980 | Msa1397100 | 0.816856 | 4.456801e-52 | -8.615850e-47 |
| Msa1078980 | Msa1406080 | 0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa1078980 | Msa1418770 | 0.845305 | 4.413033e-59 | -8.615850e-47 |
| Msa1078980 | Msa1426120 | 0.979509 | 4.005788e-148 | -8.615850e-47 |
| Msa1078980 | Msa1426370 | 0.802047 | 6.751018e-49 | -8.615850e-47 |
| Msa1078980 | Msa1426490 | 0.824627 | 7.285906e-54 | -8.615850e-47 |
| Msa0250820 | Msa1078980 | 0.808598 | 2.862751e-50 | -8.615850e-47 |
| Msa0250870 | Msa1078980 | 0.825914 | 3.614489e-54 | -8.615850e-47 |
| Msa0257450 | Msa1078980 | 0.824918 | 6.221435e-54 | -8.615850e-47 |
| Msa0258850 | Msa1078980 | 0.815532 | 8.808095e-52 | -8.615850e-47 |
| Msa0264010 | Msa1078980 | 0.809012 | 2.334736e-50 | -8.615850e-47 |
| Msa0265250 | Msa1078980 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa0289580 | Msa1078980 | 0.811927 | 5.481402e-51 | -8.615850e-47 |
| Msa0289610 | Msa1078980 | 0.809610 | 1.737547e-50 | -8.615850e-47 |
| Msa0297830 | Msa1078980 | 0.854443 | 1.226536e-61 | -8.615850e-47 |
| Msa0298200 | Msa1078980 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa0301220 | Msa1078980 | 0.838317 | 3.089497e-57 | -8.615850e-47 |
| Msa0306690 | Msa1078980 | 0.800704 | 1.272311e-48 | -8.615850e-47 |
| Msa0312210 | Msa1078980 | 0.810979 | 8.802634e-51 | -8.615850e-47 |
| Msa0335840 | Msa1078980 | 0.870431 | 1.467135e-66 | -8.615850e-47 |
| Msa0341880 | Msa1078980 | 0.830758 | 2.452108e-55 | -8.615850e-47 |
| Msa0342850 | Msa1078980 | 0.849850 | 2.481212e-60 | -8.615850e-47 |
| Msa0486070 | Msa1078980 | 0.827110 | 1.874371e-54 | -8.615850e-47 |
| Msa0529900 | Msa1078980 | 0.850722 | 1.413327e-60 | -8.615850e-47 |
| Msa0550420 | Msa1078980 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
| Msa0557720 | Msa1078980 | 0.801976 | 6.984342e-49 | -8.615850e-47 |
| Msa0573550 | Msa1078980 | 0.814386 | 1.581730e-51 | -8.615850e-47 |
| Msa0584030 | Msa1078980 | 0.846832 | 1.694814e-59 | -8.615850e-47 |
| Msa0596370 | Msa1078980 | 0.808341 | 3.248381e-50 | -8.615850e-47 |
| Msa0861320 | Msa1078980 | 0.848371 | 6.394480e-60 | -8.615850e-47 |
| Msa0881290 | Msa1078980 | 0.811855 | 5.682319e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078980 | MtrunA17_Chr7g0263691 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 4.72e-101 | 285 |
| Msa1078980 | MtrunA17_Chr1g0181621 | 93.662 | 142 | 9 | 0 | 1 | 142 | 1 | 142 | 1.56e-94 | 269 |
| Msa1078980 | MtrunA17_Chr7g0239631 | 52.113 | 71 | 31 | 2 | 40 | 109 | 13 | 81 | 4.35e-16 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078980 | AT5G02960.1 | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.09e-98 | 278 |
| Msa1078980 | AT3G09680.1 | 92.958 | 142 | 10 | 0 | 1 | 142 | 1 | 142 | 2.12e-93 | 266 |
Find 61 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGGTCGTGAAGGTTTC+TGG | 0.178129 | 7_2:+78009526 | Msa1078980:CDS |
| GAAGTCTTGATCGCTGGATT+TGG | 0.312989 | 7_2:+78009463 | Msa1078980:CDS |
| TAATTCAAGCAACCATCATT+TGG | 0.323107 | 7_2:-78009287 | None:intergenic |
| CATGCTGTTGGTGATATTCC+TGG | 0.406074 | 7_2:+78009496 | Msa1078980:CDS |
| CATAAAACTCATTAAGTTTG+AGG | 0.408113 | 7_2:-78009665 | None:intergenic |
| TAGTTCTGCTTGGAGGAAAT+CGG | 0.419730 | 7_2:-78008367 | None:intergenic |
| AATTCAAGCAACCATCATTT+GGG | 0.428558 | 7_2:-78009286 | None:intergenic |
| CACTTACGAATGGCAGAGTT+GGG | 0.434931 | 7_2:-78009215 | None:intergenic |
| CTGCCATTCGTAAGTGTGCT+AGG | 0.435504 | 7_2:+78009222 | Msa1078980:CDS |
| TTGGTGATATTCCTGGAGTC+AGG | 0.441270 | 7_2:+78009503 | Msa1078980:CDS |
| AGCATGGGATGAACCAGAAA+AGG | 0.446685 | 7_2:-78009044 | None:intergenic |
| TTCTGGTTCATCCCATGCTA+AGG | 0.454550 | 7_2:+78009048 | Msa1078980:CDS |
| AATTTAAGAAATCTCATCTT+GGG | 0.454713 | 7_2:+78009005 | Msa1078980:CDS |
| AATCTCATCTTGGGAATGAA+TGG | 0.457554 | 7_2:+78009014 | Msa1078980:CDS |
| CAATTTAAGAAATCTCATCT+TGG | 0.461581 | 7_2:+78009004 | Msa1078980:CDS |
| CAGCCCACCTTTGCTTGATA+CGG | 0.462913 | 7_2:-78008976 | None:intergenic |
| TTTATTCACCGGAAAGATTG+AGG | 0.463634 | 7_2:-78009795 | None:intergenic |
| TAGGATGAAGTCTTGATCGC+TGG | 0.469665 | 7_2:+78009457 | Msa1078980:intron |
| GCTGCCTTTGTCCCAAATGA+TGG | 0.476668 | 7_2:+78009275 | Msa1078980:CDS |
| AAAGATTACTAGTACTAAAA+CGG | 0.482451 | 7_2:-78009701 | None:intergenic |
| AACTAATTCTCGATCACCAT+GGG | 0.484292 | 7_2:+78008385 | Msa1078980:exon |
| TGCAGGAAGACAAGAGGAAT+GGG | 0.492442 | 7_2:+78008929 | Msa1078980:intron |
| CAAGAACAATTCCCTTAGCA+TGG | 0.494037 | 7_2:-78009060 | None:intergenic |
| CGAGAATTAGTTCTGCTTGG+AGG | 0.500410 | 7_2:-78008374 | None:intergenic |
| AGCCTAGGTCTTGAAGTTGT+GGG | 0.508957 | 7_2:+78009587 | Msa1078980:exon |
| ACACTTACGAATGGCAGAGT+TGG | 0.515105 | 7_2:-78009216 | None:intergenic |
| AAGCCTAGGTCTTGAAGTTG+TGG | 0.517866 | 7_2:+78009586 | Msa1078980:exon |
| ATCGCTGGATTTGGACGTAA+AGG | 0.518707 | 7_2:+78009472 | Msa1078980:CDS |
| GCATGGGATGAACCAGAAAA+GGG | 0.518943 | 7_2:-78009043 | None:intergenic |
| AGGAGAAGAAGGAGAAGCCT+AGG | 0.519158 | 7_2:+78009572 | Msa1078980:CDS |
| GATCGAGAATTAGTTCTGCT+TGG | 0.520258 | 7_2:-78008377 | None:intergenic |
| TTATTCACCGGAAAGATTGA+GGG | 0.524238 | 7_2:-78009794 | None:intergenic |
| TATTCCTGGAGTCAGGTTCA+AGG | 0.524415 | 7_2:+78009510 | Msa1078980:CDS |
| CTGCAGGAAGACAAGAGGAA+TGG | 0.532735 | 7_2:+78008928 | Msa1078980:intron |
| AAGAACAATTCCCTTAGCAT+GGG | 0.533822 | 7_2:-78009059 | None:intergenic |
| TCTGGTTCATCCCATGCTAA+GGG | 0.536691 | 7_2:+78009049 | Msa1078980:CDS |
| TGCCATTCGTAAGTGTGCTA+GGG | 0.546102 | 7_2:+78009223 | Msa1078980:CDS |
| AAGTGGTACAGTTTATTCAC+CGG | 0.560618 | 7_2:-78009806 | None:intergenic |
| GCAACCATCATTTGGGACAA+AGG | 0.566362 | 7_2:-78009279 | None:intergenic |
| TGGGAGCTGCTCGCAAGCTG+AGG | 0.577320 | 7_2:+78008948 | Msa1078980:CDS |
| ACGACCTTGAACCTGACTCC+AGG | 0.578153 | 7_2:-78009514 | None:intergenic |
| GGCACAACAAAAGAGAAGAT+AGG | 0.579690 | 7_2:-78009769 | None:intergenic |
| AGAAGAAGAGTATGCTAAAG+CGG | 0.586253 | 7_2:-78008344 | None:intergenic |
| GACTCCGTATCAAGCAAAGG+TGG | 0.586634 | 7_2:+78008972 | Msa1078980:CDS |
| TCTTCTCCTTGAAAAGAGCA+AGG | 0.589001 | 7_2:-78009558 | None:intergenic |
| TTTGTCTGCAGGAAGACAAG+AGG | 0.606196 | 7_2:+78008923 | Msa1078980:intron |
| AAGATAATTGAATAATCAAG+TGG | 0.606771 | 7_2:-78009823 | None:intergenic |
| GGACGTAAAGGTCATGCTGT+TGG | 0.616141 | 7_2:+78009484 | Msa1078980:CDS |
| TTCACCGGAAAGATTGAGGG+GGG | 0.622344 | 7_2:-78009791 | None:intergenic |
| GAACTAATTCTCGATCACCA+TGG | 0.625355 | 7_2:+78008384 | Msa1078980:exon |
| AACCCTAGCACACTTACGAA+TGG | 0.626506 | 7_2:-78009225 | None:intergenic |
| TAGGTCTTGAAGTTGTGGGA+TGG | 0.637581 | 7_2:+78009591 | Msa1078980:exon |
| TGGTTGCTTGAATTACATTG+AGG | 0.642212 | 7_2:+78009295 | Msa1078980:CDS |
| TATTCACCGGAAAGATTGAG+GGG | 0.643789 | 7_2:-78009793 | None:intergenic |
| AGTCAGGTTCAAGGTCGTGA+AGG | 0.647492 | 7_2:+78009519 | Msa1078980:CDS |
| ACTCCGTATCAAGCAAAGGT+GGG | 0.652737 | 7_2:+78008973 | Msa1078980:CDS |
| GGAGACTCCGTATCAAGCAA+AGG | 0.654928 | 7_2:+78008969 | Msa1078980:CDS |
| ATCCCACAACTTCAAGACCT+AGG | 0.665200 | 7_2:-78009589 | None:intergenic |
| TCACCGGAAAGATTGAGGGG+GGG | 0.673696 | 7_2:-78009790 | None:intergenic |
| ATTCACCGGAAAGATTGAGG+GGG | 0.689564 | 7_2:-78009792 | None:intergenic |
| ACTAATTCTCGATCACCATG+GGG | 0.745036 | 7_2:+78008386 | Msa1078980:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAATTTAGTTAATTTT+AGG | + | chr7_2:78008834-78008853 | Msa1078980:intron | 10.0% |
| !!! | GAAAAAATTTAGTTAATTTT+AGG | + | chr7_2:78008834-78008853 | Msa1078980:intron | 10.0% |
| !!! | ATTTGTATATTTCTAGTATT+AGG | + | chr7_2:78008679-78008698 | Msa1078980:intron | 15.0% |
| !!! | ATTTGTATATTTCTAGTATT+AGG | + | chr7_2:78008679-78008698 | Msa1078980:intron | 15.0% |
| !!! | AATTTAGTTAATTTTAGGCA+TGG | + | chr7_2:78008839-78008858 | Msa1078980:intron | 20.0% |
| !! | AATTTAAGAAATCTCATCTT+GGG | + | chr7_2:78009005-78009024 | Msa1078980:CDS | 20.0% |
| !! | AAGATATATTTAGTAGTAAG+AGG | - | chr7_2:78009108-78009127 | None:intergenic | 20.0% |
| !! | TGTAGTTTACATAGTATTAA+AGG | - | chr7_2:78009397-78009416 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAGAAAAAAG+AGG | - | chr7_2:78009621-78009640 | None:intergenic | 20.0% |
| !! | AAAGATTACTAGTACTAAAA+CGG | - | chr7_2:78009704-78009723 | None:intergenic | 20.0% |
| !! | AAGATAATTGAATAATCAAG+TGG | - | chr7_2:78009826-78009845 | None:intergenic | 20.0% |
| !!! | AATTTAGTTAATTTTAGGCA+TGG | + | chr7_2:78008839-78008858 | Msa1078980:intron | 20.0% |
| !! | AATTTAAGAAATCTCATCTT+GGG | + | chr7_2:78009005-78009024 | Msa1078980:CDS | 20.0% |
| !! | AAGATATATTTAGTAGTAAG+AGG | - | chr7_2:78009108-78009127 | None:intergenic | 20.0% |
| !! | TGTAGTTTACATAGTATTAA+AGG | - | chr7_2:78009397-78009416 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAGAAAAAAG+AGG | - | chr7_2:78009621-78009640 | None:intergenic | 20.0% |
| !! | AAAGATTACTAGTACTAAAA+CGG | - | chr7_2:78009704-78009723 | None:intergenic | 20.0% |
| !! | AAGATAATTGAATAATCAAG+TGG | - | chr7_2:78009826-78009845 | None:intergenic | 20.0% |
| ! | TTCAAATACGACAATTAGAA+TGG | - | chr7_2:78008479-78008498 | None:intergenic | 25.0% |
| ! | TTTGAATTTGACTCTGAATT+TGG | + | chr7_2:78008493-78008512 | Msa1078980:intron | 25.0% |
| !!! | GAATTTTTTGCTACTTAGTA+TGG | + | chr7_2:78008615-78008634 | Msa1078980:intron | 25.0% |
| ! | CAATTTAAGAAATCTCATCT+TGG | + | chr7_2:78009004-78009023 | Msa1078980:CDS | 25.0% |
| ! | TTATTACGCATATGATGTTA+AGG | + | chr7_2:78009149-78009168 | Msa1078980:intron | 25.0% |
| ! | TATGATGTTAAGGATTTGTA+TGG | + | chr7_2:78009159-78009178 | Msa1078980:intron | 25.0% |
| ! | AGGGTTCAATTAATCAAAAA+TGG | + | chr7_2:78009242-78009261 | Msa1078980:CDS | 25.0% |
| ! | GGGTTCAATTAATCAAAAAT+GGG | + | chr7_2:78009243-78009262 | Msa1078980:CDS | 25.0% |
| ! | AATTAACATAACAGACTCAA+AGG | - | chr7_2:78009371-78009390 | None:intergenic | 25.0% |
| ! | CATAAAACTCATTAAGTTTG+AGG | - | chr7_2:78009668-78009687 | None:intergenic | 25.0% |
| !! | CTCAAACTTAATGAGTTTTA+TGG | + | chr7_2:78009666-78009685 | Msa1078980:three_prime_UTR | 25.0% |
| ! | TTCAAATACGACAATTAGAA+TGG | - | chr7_2:78008479-78008498 | None:intergenic | 25.0% |
| ! | TTTGAATTTGACTCTGAATT+TGG | + | chr7_2:78008493-78008512 | Msa1078980:intron | 25.0% |
| !!! | GAATTTTTTGCTACTTAGTA+TGG | + | chr7_2:78008615-78008634 | Msa1078980:intron | 25.0% |
| ! | CAATTTAAGAAATCTCATCT+TGG | + | chr7_2:78009004-78009023 | Msa1078980:CDS | 25.0% |
| ! | TTATTACGCATATGATGTTA+AGG | + | chr7_2:78009149-78009168 | Msa1078980:intron | 25.0% |
| ! | TATGATGTTAAGGATTTGTA+TGG | + | chr7_2:78009159-78009178 | Msa1078980:intron | 25.0% |
| ! | AGGGTTCAATTAATCAAAAA+TGG | + | chr7_2:78009242-78009261 | Msa1078980:CDS | 25.0% |
| ! | GGGTTCAATTAATCAAAAAT+GGG | + | chr7_2:78009243-78009262 | Msa1078980:CDS | 25.0% |
| ! | AATTAACATAACAGACTCAA+AGG | - | chr7_2:78009371-78009390 | None:intergenic | 25.0% |
| ! | CATAAAACTCATTAAGTTTG+AGG | - | chr7_2:78009668-78009687 | None:intergenic | 25.0% |
| !! | CTCAAACTTAATGAGTTTTA+TGG | + | chr7_2:78009666-78009685 | Msa1078980:three_prime_UTR | 25.0% |
| GGAACACAAAAACATGAAAT+AGG | + | chr7_2:78008559-78008578 | Msa1078980:intron | 30.0% | |
| ! | ATTCGCTTCATTTGAAATCA+TGG | + | chr7_2:78008715-78008734 | Msa1078980:intron | 30.0% |
| ! | TTTGTTTATCTTTTGTCTGC+AGG | + | chr7_2:78008912-78008931 | Msa1078980:intron | 30.0% |
| ! | TTTTATGTGTAGTGGTATTG+AGG | + | chr7_2:78009184-78009203 | Msa1078980:intron | 30.0% |
| AATTCAAGCAACCATCATTT+GGG | - | chr7_2:78009289-78009308 | None:intergenic | 30.0% | |
| TAATTCAAGCAACCATCATT+TGG | - | chr7_2:78009290-78009309 | None:intergenic | 30.0% | |
| ATGTATATCCTCCAGTAATA+TGG | + | chr7_2:78009417-78009436 | Msa1078980:intron | 30.0% | |
| ATCATCAACAACCATATTAC+TGG | - | chr7_2:78009431-78009450 | None:intergenic | 30.0% | |
| ! | AGTAATATGGTTGTTGATGA+TGG | + | chr7_2:78009430-78009449 | Msa1078980:intron | 30.0% |
| GGAACACAAAAACATGAAAT+AGG | + | chr7_2:78008559-78008578 | Msa1078980:intron | 30.0% | |
| ! | ATTCGCTTCATTTGAAATCA+TGG | + | chr7_2:78008715-78008734 | Msa1078980:intron | 30.0% |
| ! | TTTGTTTATCTTTTGTCTGC+AGG | + | chr7_2:78008912-78008931 | Msa1078980:intron | 30.0% |
| ! | TTTTATGTGTAGTGGTATTG+AGG | + | chr7_2:78009184-78009203 | Msa1078980:intron | 30.0% |
| AATTCAAGCAACCATCATTT+GGG | - | chr7_2:78009289-78009308 | None:intergenic | 30.0% | |
| TAATTCAAGCAACCATCATT+TGG | - | chr7_2:78009290-78009309 | None:intergenic | 30.0% | |
| ATGTATATCCTCCAGTAATA+TGG | + | chr7_2:78009417-78009436 | Msa1078980:intron | 30.0% | |
| ATCATCAACAACCATATTAC+TGG | - | chr7_2:78009431-78009450 | None:intergenic | 30.0% | |
| ! | AGTAATATGGTTGTTGATGA+TGG | + | chr7_2:78009430-78009449 | Msa1078980:intron | 30.0% |
| ! | AGAAGAAGAGTATGCTAAAG+CGG | - | chr7_2:78008347-78008366 | None:intergenic | 35.0% |
| AACTAATTCTCGATCACCAT+GGG | + | chr7_2:78008385-78008404 | Msa1078980:exon | 35.0% | |
| ! | TCTGTTTGCTTTCTGAGAAT+TGG | + | chr7_2:78008537-78008556 | Msa1078980:intron | 35.0% |
| ! | CTGTTTGCTTTCTGAGAATT+GGG | + | chr7_2:78008538-78008557 | Msa1078980:intron | 35.0% |
| AATCTCATCTTGGGAATGAA+TGG | + | chr7_2:78009014-78009033 | Msa1078980:CDS | 35.0% | |
| AAGAACAATTCCCTTAGCAT+GGG | - | chr7_2:78009062-78009081 | None:intergenic | 35.0% | |
| ! | GTATGGTCTTTTATGTGTAG+TGG | + | chr7_2:78009176-78009195 | Msa1078980:intron | 35.0% |
| TGGTTGCTTGAATTACATTG+AGG | + | chr7_2:78009295-78009314 | Msa1078980:CDS | 35.0% | |
| ATCAACAACCATATTACTGG+AGG | - | chr7_2:78009428-78009447 | None:intergenic | 35.0% | |
| TTATTCACCGGAAAGATTGA+GGG | - | chr7_2:78009797-78009816 | None:intergenic | 35.0% | |
| TTTATTCACCGGAAAGATTG+AGG | - | chr7_2:78009798-78009817 | None:intergenic | 35.0% | |
| AAGTGGTACAGTTTATTCAC+CGG | - | chr7_2:78009809-78009828 | None:intergenic | 35.0% | |
| ! | AGAAGAAGAGTATGCTAAAG+CGG | - | chr7_2:78008347-78008366 | None:intergenic | 35.0% |
| AACTAATTCTCGATCACCAT+GGG | + | chr7_2:78008385-78008404 | Msa1078980:exon | 35.0% | |
| ! | TCTGTTTGCTTTCTGAGAAT+TGG | + | chr7_2:78008537-78008556 | Msa1078980:intron | 35.0% |
| ! | CTGTTTGCTTTCTGAGAATT+GGG | + | chr7_2:78008538-78008557 | Msa1078980:intron | 35.0% |
| AATCTCATCTTGGGAATGAA+TGG | + | chr7_2:78009014-78009033 | Msa1078980:CDS | 35.0% | |
| AAGAACAATTCCCTTAGCAT+GGG | - | chr7_2:78009062-78009081 | None:intergenic | 35.0% | |
| ! | GTATGGTCTTTTATGTGTAG+TGG | + | chr7_2:78009176-78009195 | Msa1078980:intron | 35.0% |
| TGGTTGCTTGAATTACATTG+AGG | + | chr7_2:78009295-78009314 | Msa1078980:CDS | 35.0% | |
| ATCAACAACCATATTACTGG+AGG | - | chr7_2:78009428-78009447 | None:intergenic | 35.0% | |
| TTATTCACCGGAAAGATTGA+GGG | - | chr7_2:78009797-78009816 | None:intergenic | 35.0% | |
| TTTATTCACCGGAAAGATTG+AGG | - | chr7_2:78009798-78009817 | None:intergenic | 35.0% | |
| AAGTGGTACAGTTTATTCAC+CGG | - | chr7_2:78009809-78009828 | None:intergenic | 35.0% | |
| ! | TAGTTCTGCTTGGAGGAAAT+CGG | - | chr7_2:78008370-78008389 | None:intergenic | 40.0% |
| !! | GATCGAGAATTAGTTCTGCT+TGG | - | chr7_2:78008380-78008399 | None:intergenic | 40.0% |
| GAACTAATTCTCGATCACCA+TGG | + | chr7_2:78008384-78008403 | Msa1078980:exon | 40.0% | |
| ACTAATTCTCGATCACCATG+GGG | + | chr7_2:78008386-78008405 | Msa1078980:exon | 40.0% | |
| TGTGAAGTTGTATTACCCCA+TGG | - | chr7_2:78008404-78008423 | None:intergenic | 40.0% | |
| ! | GAATGGAAGAAACCCTTTTC+TGG | + | chr7_2:78009031-78009050 | Msa1078980:CDS | 40.0% |
| CAAGAACAATTCCCTTAGCA+TGG | - | chr7_2:78009063-78009082 | None:intergenic | 40.0% | |
| !! | GGTTGTTGATGATGGTTTGT+AGG | + | chr7_2:78009438-78009457 | Msa1078980:intron | 40.0% |
| TCTTCTCCTTGAAAAGAGCA+AGG | - | chr7_2:78009561-78009580 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTCAAGGAGAAGA+AGG | + | chr7_2:78009561-78009580 | Msa1078980:CDS | 40.0% |
| GGCACAACAAAAGAGAAGAT+AGG | - | chr7_2:78009772-78009791 | None:intergenic | 40.0% | |
| TATTCACCGGAAAGATTGAG+GGG | - | chr7_2:78009796-78009815 | None:intergenic | 40.0% | |
| CAATTATCTTGCAAGAGCAG+AGG | + | chr7_2:78009836-78009855 | Msa1078980:three_prime_UTR | 40.0% | |
| ! | TAGTTCTGCTTGGAGGAAAT+CGG | - | chr7_2:78008370-78008389 | None:intergenic | 40.0% |
| !! | GATCGAGAATTAGTTCTGCT+TGG | - | chr7_2:78008380-78008399 | None:intergenic | 40.0% |
| GAACTAATTCTCGATCACCA+TGG | + | chr7_2:78008384-78008403 | Msa1078980:exon | 40.0% | |
| ACTAATTCTCGATCACCATG+GGG | + | chr7_2:78008386-78008405 | Msa1078980:exon | 40.0% | |
| TGTGAAGTTGTATTACCCCA+TGG | - | chr7_2:78008404-78008423 | None:intergenic | 40.0% | |
| ! | GAATGGAAGAAACCCTTTTC+TGG | + | chr7_2:78009031-78009050 | Msa1078980:CDS | 40.0% |
| CAAGAACAATTCCCTTAGCA+TGG | - | chr7_2:78009063-78009082 | None:intergenic | 40.0% | |
| !! | GGTTGTTGATGATGGTTTGT+AGG | + | chr7_2:78009438-78009457 | Msa1078980:intron | 40.0% |
| TCTTCTCCTTGAAAAGAGCA+AGG | - | chr7_2:78009561-78009580 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTCAAGGAGAAGA+AGG | + | chr7_2:78009561-78009580 | Msa1078980:CDS | 40.0% |
| GGCACAACAAAAGAGAAGAT+AGG | - | chr7_2:78009772-78009791 | None:intergenic | 40.0% | |
| TATTCACCGGAAAGATTGAG+GGG | - | chr7_2:78009796-78009815 | None:intergenic | 40.0% | |
| !! | CGAGAATTAGTTCTGCTTGG+AGG | - | chr7_2:78008377-78008396 | None:intergenic | 45.0% |
| TTTGTCTGCAGGAAGACAAG+AGG | + | chr7_2:78008923-78008942 | Msa1078980:intron | 45.0% | |
| TGCAGGAAGACAAGAGGAAT+GGG | + | chr7_2:78008929-78008948 | Msa1078980:intron | 45.0% | |
| ACTCCGTATCAAGCAAAGGT+GGG | + | chr7_2:78008973-78008992 | Msa1078980:CDS | 45.0% | |
| GCATGGGATGAACCAGAAAA+GGG | - | chr7_2:78009046-78009065 | None:intergenic | 45.0% | |
| AGCATGGGATGAACCAGAAA+AGG | - | chr7_2:78009047-78009066 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCATCCCATGCTA+AGG | + | chr7_2:78009048-78009067 | Msa1078980:CDS | 45.0% |
| ! | TCTGGTTCATCCCATGCTAA+GGG | + | chr7_2:78009049-78009068 | Msa1078980:CDS | 45.0% |
| CACTTACGAATGGCAGAGTT+GGG | - | chr7_2:78009218-78009237 | None:intergenic | 45.0% | |
| ACACTTACGAATGGCAGAGT+TGG | - | chr7_2:78009219-78009238 | None:intergenic | 45.0% | |
| TGCCATTCGTAAGTGTGCTA+GGG | + | chr7_2:78009223-78009242 | Msa1078980:CDS | 45.0% | |
| AACCCTAGCACACTTACGAA+TGG | - | chr7_2:78009228-78009247 | None:intergenic | 45.0% | |
| ! | GCAACCATCATTTGGGACAA+AGG | - | chr7_2:78009282-78009301 | None:intergenic | 45.0% |
| TAGGATGAAGTCTTGATCGC+TGG | + | chr7_2:78009457-78009476 | Msa1078980:intron | 45.0% | |
| GAAGTCTTGATCGCTGGATT+TGG | + | chr7_2:78009463-78009482 | Msa1078980:CDS | 45.0% | |
| ATCGCTGGATTTGGACGTAA+AGG | + | chr7_2:78009472-78009491 | Msa1078980:CDS | 45.0% | |
| !! | CATGCTGTTGGTGATATTCC+TGG | + | chr7_2:78009496-78009515 | Msa1078980:CDS | 45.0% |
| ! | TTGGTGATATTCCTGGAGTC+AGG | + | chr7_2:78009503-78009522 | Msa1078980:CDS | 45.0% |
| TATTCCTGGAGTCAGGTTCA+AGG | + | chr7_2:78009510-78009529 | Msa1078980:CDS | 45.0% | |
| TTCAAGGTCGTGAAGGTTTC+TGG | + | chr7_2:78009526-78009545 | Msa1078980:CDS | 45.0% | |
| ! | CTCTCTCCTTGCTCTTTTCA+AGG | + | chr7_2:78009552-78009571 | Msa1078980:CDS | 45.0% |
| AAGCCTAGGTCTTGAAGTTG+TGG | + | chr7_2:78009586-78009605 | Msa1078980:exon | 45.0% | |
| AGCCTAGGTCTTGAAGTTGT+GGG | + | chr7_2:78009587-78009606 | Msa1078980:exon | 45.0% | |
| ATCCCACAACTTCAAGACCT+AGG | - | chr7_2:78009592-78009611 | None:intergenic | 45.0% | |
| TAGGTCTTGAAGTTGTGGGA+TGG | + | chr7_2:78009591-78009610 | Msa1078980:exon | 45.0% | |
| ATTCACCGGAAAGATTGAGG+GGG | - | chr7_2:78009795-78009814 | None:intergenic | 45.0% | |
| !! | CGAGAATTAGTTCTGCTTGG+AGG | - | chr7_2:78008377-78008396 | None:intergenic | 45.0% |
| TTTGTCTGCAGGAAGACAAG+AGG | + | chr7_2:78008923-78008942 | Msa1078980:intron | 45.0% | |
| TGCAGGAAGACAAGAGGAAT+GGG | + | chr7_2:78008929-78008948 | Msa1078980:intron | 45.0% | |
| ACTCCGTATCAAGCAAAGGT+GGG | + | chr7_2:78008973-78008992 | Msa1078980:CDS | 45.0% | |
| GCATGGGATGAACCAGAAAA+GGG | - | chr7_2:78009046-78009065 | None:intergenic | 45.0% | |
| AGCATGGGATGAACCAGAAA+AGG | - | chr7_2:78009047-78009066 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCATCCCATGCTA+AGG | + | chr7_2:78009048-78009067 | Msa1078980:CDS | 45.0% |
| ! | TCTGGTTCATCCCATGCTAA+GGG | + | chr7_2:78009049-78009068 | Msa1078980:CDS | 45.0% |
| CACTTACGAATGGCAGAGTT+GGG | - | chr7_2:78009218-78009237 | None:intergenic | 45.0% | |
| ACACTTACGAATGGCAGAGT+TGG | - | chr7_2:78009219-78009238 | None:intergenic | 45.0% | |
| TGCCATTCGTAAGTGTGCTA+GGG | + | chr7_2:78009223-78009242 | Msa1078980:CDS | 45.0% | |
| AACCCTAGCACACTTACGAA+TGG | - | chr7_2:78009228-78009247 | None:intergenic | 45.0% | |
| ! | GCAACCATCATTTGGGACAA+AGG | - | chr7_2:78009282-78009301 | None:intergenic | 45.0% |
| TAGGATGAAGTCTTGATCGC+TGG | + | chr7_2:78009457-78009476 | Msa1078980:intron | 45.0% | |
| GAAGTCTTGATCGCTGGATT+TGG | + | chr7_2:78009463-78009482 | Msa1078980:CDS | 45.0% | |
| ATCGCTGGATTTGGACGTAA+AGG | + | chr7_2:78009472-78009491 | Msa1078980:CDS | 45.0% | |
| !! | CATGCTGTTGGTGATATTCC+TGG | + | chr7_2:78009496-78009515 | Msa1078980:CDS | 45.0% |
| ! | TTGGTGATATTCCTGGAGTC+AGG | + | chr7_2:78009503-78009522 | Msa1078980:CDS | 45.0% |
| TATTCCTGGAGTCAGGTTCA+AGG | + | chr7_2:78009510-78009529 | Msa1078980:CDS | 45.0% | |
| TTCAAGGTCGTGAAGGTTTC+TGG | + | chr7_2:78009526-78009545 | Msa1078980:CDS | 45.0% | |
| ! | CTCTCTCCTTGCTCTTTTCA+AGG | + | chr7_2:78009552-78009571 | Msa1078980:CDS | 45.0% |
| AAGCCTAGGTCTTGAAGTTG+TGG | + | chr7_2:78009586-78009605 | Msa1078980:exon | 45.0% | |
| AGCCTAGGTCTTGAAGTTGT+GGG | + | chr7_2:78009587-78009606 | Msa1078980:exon | 45.0% | |
| ATCCCACAACTTCAAGACCT+AGG | - | chr7_2:78009592-78009611 | None:intergenic | 45.0% | |
| TAGGTCTTGAAGTTGTGGGA+TGG | + | chr7_2:78009591-78009610 | Msa1078980:exon | 45.0% | |
| ATTCACCGGAAAGATTGAGG+GGG | - | chr7_2:78009795-78009814 | None:intergenic | 45.0% | |
| CTGCAGGAAGACAAGAGGAA+TGG | + | chr7_2:78008928-78008947 | Msa1078980:intron | 50.0% | |
| GGAGACTCCGTATCAAGCAA+AGG | + | chr7_2:78008969-78008988 | Msa1078980:CDS | 50.0% | |
| GACTCCGTATCAAGCAAAGG+TGG | + | chr7_2:78008972-78008991 | Msa1078980:CDS | 50.0% | |
| CAGCCCACCTTTGCTTGATA+CGG | - | chr7_2:78008979-78008998 | None:intergenic | 50.0% | |
| CTGCCATTCGTAAGTGTGCT+AGG | + | chr7_2:78009222-78009241 | Msa1078980:CDS | 50.0% | |
| GCTGCCTTTGTCCCAAATGA+TGG | + | chr7_2:78009275-78009294 | Msa1078980:CDS | 50.0% | |
| GGACGTAAAGGTCATGCTGT+TGG | + | chr7_2:78009484-78009503 | Msa1078980:CDS | 50.0% | |
| AGTCAGGTTCAAGGTCGTGA+AGG | + | chr7_2:78009519-78009538 | Msa1078980:CDS | 50.0% | |
| AGGAGAAGAAGGAGAAGCCT+AGG | + | chr7_2:78009572-78009591 | Msa1078980:CDS | 50.0% | |
| TTCACCGGAAAGATTGAGGG+GGG | - | chr7_2:78009794-78009813 | None:intergenic | 50.0% | |
| CTGCAGGAAGACAAGAGGAA+TGG | + | chr7_2:78008928-78008947 | Msa1078980:intron | 50.0% | |
| GGAGACTCCGTATCAAGCAA+AGG | + | chr7_2:78008969-78008988 | Msa1078980:CDS | 50.0% | |
| GACTCCGTATCAAGCAAAGG+TGG | + | chr7_2:78008972-78008991 | Msa1078980:CDS | 50.0% | |
| CAGCCCACCTTTGCTTGATA+CGG | - | chr7_2:78008979-78008998 | None:intergenic | 50.0% | |
| CTGCCATTCGTAAGTGTGCT+AGG | + | chr7_2:78009222-78009241 | Msa1078980:CDS | 50.0% | |
| GCTGCCTTTGTCCCAAATGA+TGG | + | chr7_2:78009275-78009294 | Msa1078980:CDS | 50.0% | |
| GGACGTAAAGGTCATGCTGT+TGG | + | chr7_2:78009484-78009503 | Msa1078980:CDS | 50.0% | |
| AGTCAGGTTCAAGGTCGTGA+AGG | + | chr7_2:78009519-78009538 | Msa1078980:CDS | 50.0% | |
| AGGAGAAGAAGGAGAAGCCT+AGG | + | chr7_2:78009572-78009591 | Msa1078980:CDS | 50.0% | |
| TTCACCGGAAAGATTGAGGG+GGG | - | chr7_2:78009794-78009813 | None:intergenic | 50.0% | |
| ACGACCTTGAACCTGACTCC+AGG | - | chr7_2:78009517-78009536 | None:intergenic | 55.0% | |
| TCACCGGAAAGATTGAGGGG+GGG | - | chr7_2:78009793-78009812 | None:intergenic | 55.0% | |
| ACGACCTTGAACCTGACTCC+AGG | - | chr7_2:78009517-78009536 | None:intergenic | 55.0% | |
| TCACCGGAAAGATTGAGGGG+GGG | - | chr7_2:78009793-78009812 | None:intergenic | 55.0% | |
| GTGCCCCCCCTCAATCTTTC+CGG | + | chr7_2:78009787-78009806 | Msa1078980:three_prime_UTR | 60.0% | |
| GTGCCCCCCCTCAATCTTTC+CGG | + | chr7_2:78009787-78009806 | Msa1078980:three_prime_UTR | 60.0% | |
| TGGGAGCTGCTCGCAAGCTG+AGG | + | chr7_2:78008948-78008967 | Msa1078980:CDS | 65.0% | |
| TGGGAGCTGCTCGCAAGCTG+AGG | + | chr7_2:78008948-78008967 | Msa1078980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 78008323 | 78009855 | 78008323 | ID=Msa1078980;Name=Msa1078980 |
| chr7_2 | mRNA | 78008323 | 78009855 | 78008323 | ID=Msa1078980-mRNA-1;Parent=Msa1078980;Name=Msa1078980-mRNA-1;_AED=0.02;_eAED=0.02;_QI=80|1|1|1|1|1|4|255|142 |
| chr7_2 | exon | 78008323 | 78008407 | 78008323 | ID=Msa1078980-mRNA-1:exon:19328;Parent=Msa1078980-mRNA-1 |
| chr7_2 | exon | 78008934 | 78009089 | 78008934 | ID=Msa1078980-mRNA-1:exon:19329;Parent=Msa1078980-mRNA-1 |
| chr7_2 | exon | 78009196 | 78009322 | 78009196 | ID=Msa1078980-mRNA-1:exon:19330;Parent=Msa1078980-mRNA-1 |
| chr7_2 | exon | 78009460 | 78009855 | 78009460 | ID=Msa1078980-mRNA-1:exon:19331;Parent=Msa1078980-mRNA-1 |
| chr7_2 | five_prime_UTR | 78008323 | 78008402 | 78008323 | ID=Msa1078980-mRNA-1:five_prime_utr;Parent=Msa1078980-mRNA-1 |
| chr7_2 | CDS | 78008403 | 78008407 | 78008403 | ID=Msa1078980-mRNA-1:cds;Parent=Msa1078980-mRNA-1 |
| chr7_2 | CDS | 78008934 | 78009089 | 78008934 | ID=Msa1078980-mRNA-1:cds;Parent=Msa1078980-mRNA-1 |
| chr7_2 | CDS | 78009196 | 78009322 | 78009196 | ID=Msa1078980-mRNA-1:cds;Parent=Msa1078980-mRNA-1 |
| chr7_2 | CDS | 78009460 | 78009600 | 78009460 | ID=Msa1078980-mRNA-1:cds;Parent=Msa1078980-mRNA-1 |
| chr7_2 | three_prime_UTR | 78009601 | 78009855 | 78009601 | ID=Msa1078980-mRNA-1:three_prime_utr;Parent=Msa1078980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
