Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982940 | XP_003601873.1 | 100.000 | 535 | 0 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1098 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982940 | sp|O04450|TCPE_ARATH | 89.346 | 535 | 57 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982940 | G7J2L7 | 100.000 | 535 | 0 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1098 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0982940 | -0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0053260 | Msa0982940 | -0.815973 | 7.024594e-52 | -8.615850e-47 |
| Msa0056230 | Msa0982940 | -0.803892 | 2.805535e-49 | -8.615850e-47 |
| Msa0098500 | Msa0982940 | -0.820274 | 7.478529e-53 | -8.615850e-47 |
| Msa0638300 | Msa0982940 | -0.801143 | 1.034731e-48 | -8.615850e-47 |
| Msa0714230 | Msa0982940 | -0.801567 | 8.471670e-49 | -8.615850e-47 |
| Msa0790450 | Msa0982940 | 0.813770 | 2.162869e-51 | -8.615850e-47 |
| Msa0127910 | Msa0982940 | -0.822190 | 2.704759e-53 | -8.615850e-47 |
| Msa0138990 | Msa0982940 | -0.811987 | 5.317665e-51 | -8.615850e-47 |
| Msa0174060 | Msa0982940 | -0.812420 | 4.277515e-51 | -8.615850e-47 |
| Msa0180520 | Msa0982940 | -0.807302 | 5.401389e-50 | -8.615850e-47 |
| Msa0192050 | Msa0982940 | 0.815711 | 8.036149e-52 | -8.615850e-47 |
| Msa0371350 | Msa0982940 | -0.800357 | 1.497305e-48 | -8.615850e-47 |
| Msa0373830 | Msa0982940 | 0.975592 | 3.094160e-140 | -8.615850e-47 |
| Msa0388250 | Msa0982940 | 0.800879 | 1.171814e-48 | -8.615850e-47 |
| Msa0390590 | Msa0982940 | -0.820053 | 8.405928e-53 | -8.615850e-47 |
| Msa0419420 | Msa0982940 | -0.805079 | 1.587014e-49 | -8.615850e-47 |
| Msa0982940 | Msa1014550 | -0.808324 | 3.275569e-50 | -8.615850e-47 |
| Msa0982940 | Msa1055520 | -0.819713 | 1.004922e-52 | -8.615850e-47 |
| Msa0982940 | Msa1057940 | -0.801475 | 8.849233e-49 | -8.615850e-47 |
| Msa0982940 | Msa1078280 | -0.832965 | 6.993144e-56 | -8.615850e-47 |
| Msa0982940 | Msa1078590 | -0.813326 | 2.709063e-51 | -8.615850e-47 |
| Msa0982940 | Msa1078760 | -0.812566 | 3.974294e-51 | -8.615850e-47 |
| Msa0982940 | Msa1085570 | -0.820367 | 7.119492e-53 | -8.615850e-47 |
| Msa0982940 | Msa1091290 | 0.825323 | 4.989581e-54 | -8.615850e-47 |
| Msa0982940 | Msa1123490 | -0.835899 | 1.282457e-56 | -8.615850e-47 |
| Msa0982940 | Msa1129120 | -0.812654 | 3.802546e-51 | -8.615850e-47 |
| Msa0982940 | Msa1169590 | -0.815894 | 7.316909e-52 | -8.615850e-47 |
| Msa0982940 | Msa1169780 | -0.808592 | 2.870947e-50 | -8.615850e-47 |
| Msa0982940 | Msa1194480 | -0.823043 | 1.713254e-53 | -8.615850e-47 |
| Msa0982940 | Msa1266120 | -0.801895 | 7.255821e-49 | -8.615850e-47 |
| Msa0982940 | Msa1364110 | 0.800109 | 1.681399e-48 | -8.615850e-47 |
| Msa0982940 | Msa1366140 | -0.805952 | 1.041323e-49 | -8.615850e-47 |
| Msa0982940 | Msa1384410 | -0.820503 | 6.625860e-53 | -8.615850e-47 |
| Msa0982940 | Msa1388720 | -0.809851 | 1.542619e-50 | -8.615850e-47 |
| Msa0982940 | Msa1389670 | -0.819376 | 1.199663e-52 | -8.615850e-47 |
| Msa0982940 | Msa1421520 | -0.820286 | 7.433317e-53 | -8.615850e-47 |
| Msa0982940 | Msa1432730 | -0.803663 | 3.130900e-49 | -8.615850e-47 |
| Msa0982940 | Msa1442740 | 0.806713 | 7.196666e-50 | -8.615850e-47 |
| Msa0982940 | Msa1450560 | 0.808337 | 3.254413e-50 | -8.615850e-47 |
| Msa0267450 | Msa0982940 | -0.800261 | 1.565564e-48 | -8.615850e-47 |
| Msa0269220 | Msa0982940 | -0.809590 | 1.754953e-50 | -8.615850e-47 |
| Msa0326170 | Msa0982940 | -0.802418 | 5.664506e-49 | -8.615850e-47 |
| Msa0334450 | Msa0982940 | -0.806501 | 7.978690e-50 | -8.615850e-47 |
| Msa0545750 | Msa0982940 | -0.806678 | 7.321701e-50 | -8.615850e-47 |
| Msa0575960 | Msa0982940 | -0.825006 | 5.930342e-54 | -8.615850e-47 |
| Msa0941150 | Msa0982940 | -0.808928 | 2.433471e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982940 | MtrunA17_Chr3g0123341 | 100.000 | 535 | 0 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1098 |
| Msa0982940 | MtrunA17_Chr2g0282161 | 33.397 | 527 | 335 | 9 | 14 | 531 | 5 | 524 | 2.70e-89 | 285 |
| Msa0982940 | MtrunA17_Chr7g0272821 | 33.525 | 522 | 333 | 8 | 14 | 531 | 6 | 517 | 2.32e-84 | 271 |
| Msa0982940 | MtrunA17_Chr7g0241881 | 33.525 | 522 | 333 | 8 | 14 | 531 | 6 | 517 | 5.36e-84 | 270 |
| Msa0982940 | MtrunA17_Chr5g0440381 | 31.569 | 529 | 346 | 8 | 10 | 530 | 6 | 526 | 7.23e-80 | 260 |
| Msa0982940 | MtrunA17_Chr3g0139481 | 32.941 | 510 | 276 | 7 | 28 | 531 | 24 | 473 | 2.24e-77 | 251 |
| Msa0982940 | MtrunA17_Chr8g0380331 | 32.707 | 532 | 329 | 10 | 20 | 530 | 11 | 534 | 1.67e-72 | 240 |
| Msa0982940 | MtrunA17_Chr7g0214841 | 29.709 | 515 | 342 | 9 | 29 | 530 | 18 | 525 | 2.04e-60 | 208 |
| Msa0982940 | MtrunA17_Chr6g0461541 | 28.791 | 521 | 353 | 9 | 18 | 530 | 10 | 520 | 2.55e-56 | 197 |
| Msa0982940 | MtrunA17_Chr1g0160221 | 26.744 | 516 | 370 | 6 | 18 | 530 | 13 | 523 | 2.68e-54 | 192 |
| Msa0982940 | MtrunA17_Chr8g0392171 | 31.081 | 296 | 167 | 9 | 200 | 488 | 2 | 267 | 5.23e-33 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982940 | AT1G24510.1 | 89.346 | 535 | 57 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1005 |
| Msa0982940 | AT1G24510.3 | 90.000 | 470 | 47 | 0 | 66 | 535 | 13 | 482 | 0.0 | 889 |
| Msa0982940 | AT1G24510.2 | 89.978 | 459 | 46 | 0 | 77 | 535 | 1 | 459 | 0.0 | 868 |
| Msa0982940 | AT3G18190.1 | 36.328 | 512 | 313 | 7 | 28 | 531 | 28 | 534 | 1.74e-101 | 316 |
| Msa0982940 | AT5G26360.1 | 34.091 | 528 | 334 | 8 | 11 | 531 | 4 | 524 | 1.59e-86 | 278 |
| Msa0982940 | AT5G20890.1 | 33.464 | 511 | 328 | 7 | 25 | 531 | 15 | 517 | 7.47e-83 | 267 |
| Msa0982940 | AT3G11830.1 | 31.191 | 529 | 348 | 7 | 10 | 530 | 6 | 526 | 8.31e-77 | 252 |
| Msa0982940 | AT3G20050.1 | 32.143 | 532 | 332 | 9 | 20 | 530 | 11 | 534 | 5.24e-76 | 250 |
| Msa0982940 | AT3G11830.2 | 31.380 | 529 | 345 | 8 | 10 | 530 | 6 | 524 | 8.92e-76 | 249 |
| Msa0982940 | AT5G16070.1 | 28.794 | 514 | 347 | 8 | 29 | 530 | 18 | 524 | 1.72e-59 | 206 |
| Msa0982940 | AT3G02530.1 | 28.738 | 515 | 347 | 9 | 29 | 530 | 18 | 525 | 1.11e-57 | 201 |
| Msa0982940 | AT3G03960.1 | 25.520 | 529 | 360 | 7 | 18 | 530 | 16 | 526 | 8.17e-52 | 186 |
| Msa0982940 | AT1G67760.1 | 85.455 | 55 | 8 | 0 | 1 | 55 | 1 | 55 | 6.37e-26 | 102 |
| Msa0982940 | AT1G26230.3 | 30.769 | 117 | 77 | 1 | 40 | 152 | 2 | 118 | 3.33e-11 | 66.2 |
| Msa0982940 | AT1G26230.4 | 30.769 | 117 | 77 | 1 | 40 | 152 | 10 | 126 | 3.78e-11 | 66.2 |
| Msa0982940 | AT1G26230.1 | 30.769 | 117 | 77 | 1 | 40 | 152 | 62 | 178 | 3.87e-11 | 66.2 |
| Msa0982940 | AT1G26230.2 | 30.769 | 117 | 77 | 1 | 40 | 152 | 62 | 178 | 4.15e-11 | 65.9 |
| Msa0982940 | AT1G26230.5 | 30.769 | 117 | 77 | 1 | 40 | 152 | 62 | 178 | 4.33e-11 | 65.9 |
Find 154 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATATTTATGTTAAGATTT+TGG | 0.164114 | 6_4:+23250079 | Msa0982940:three_prime_UTR |
| CGAGCAAGCTGAGAGGCTTT+TGG | 0.216810 | 6_4:+23246282 | Msa0982940:CDS |
| TGAGTTTGGTGAAACTATTT+TGG | 0.252642 | 6_4:+23246396 | Msa0982940:CDS |
| AGAGAGGAAAGATGTTAATT+TGG | 0.255619 | 6_4:+23246662 | Msa0982940:CDS |
| TTCACACTCTCACATTCTTT+AGG | 0.262908 | 6_4:+23245701 | Msa0982940:five_prime_UTR |
| AGGAAAGGTTGGTGGGAAAT+TGG | 0.275960 | 6_4:+23246701 | Msa0982940:CDS |
| TCACACTCTCACATTCTTTA+GGG | 0.285635 | 6_4:+23245702 | Msa0982940:five_prime_UTR |
| ATTGCTAATAAGTTTGAGTT+TGG | 0.316748 | 6_4:+23246382 | Msa0982940:CDS |
| AAAACACCGCCATAGGGTTT+TGG | 0.319043 | 6_4:+23245779 | Msa0982940:five_prime_UTR |
| AATACGAGCGACGGCTTTAC+CGG | 0.319084 | 6_4:-23245929 | None:intergenic |
| ATCGACCTTTATCAGGAAAA+AGG | 0.321680 | 6_4:-23250135 | None:intergenic |
| GAAGATACTGAGTTGGTATA+TGG | 0.326902 | 6_4:+23246723 | Msa0982940:CDS |
| GGAACTTGCCAGCTGTTAGA+TGG | 0.327806 | 6_4:+23247224 | Msa0982940:CDS |
| GAATGATGGAGCGACGATAT+TGG | 0.333446 | 6_4:+23246144 | Msa0982940:CDS |
| CAGTATGCAATTAGAGCATT+TGG | 0.341403 | 6_4:+23249558 | Msa0982940:intron |
| TTGGATCTGATTAAAGTAGA+AGG | 0.353109 | 6_4:+23246681 | Msa0982940:CDS |
| TAGAGCATTTGGGGATGCTT+TGG | 0.353755 | 6_4:+23249569 | Msa0982940:CDS |
| CAGGATTGCTGTTGAGAATC+TGG | 0.357169 | 6_4:+23246354 | Msa0982940:CDS |
| CGCAATAATTCAATTGTGTA+TGG | 0.358368 | 6_4:+23248299 | Msa0982940:CDS |
| TCAATTTGCTTTGGCATTTG+AGG | 0.361290 | 6_4:-23246774 | None:intergenic |
| AAAACCCTATGGCGGTGTTT+TGG | 0.367098 | 6_4:-23245777 | None:intergenic |
| AAGATAATGTTTCAATTGGT+TGG | 0.367949 | 6_4:-23249629 | None:intergenic |
| AACCCTTGTTATTTGCCAAT+GGG | 0.374410 | 6_4:+23247165 | Msa0982940:CDS |
| ATCGAAAGCCAGCGCCATAT+TGG | 0.376986 | 6_4:-23245818 | None:intergenic |
| GCACGTCTTTGTATTGGAGT+TGG | 0.378877 | 6_4:+23250101 | Msa0982940:three_prime_UTR |
| TATTCAAGGCTGGCATCGTT+AGG | 0.383631 | 6_4:+23247646 | Msa0982940:intron |
| AAGAACAATCGACCTTTATC+AGG | 0.388339 | 6_4:-23250142 | None:intergenic |
| ACAGAAGATAATGTTTCAAT+TGG | 0.393608 | 6_4:-23249633 | None:intergenic |
| AGTATGCAATTAGAGCATTT+GGG | 0.396525 | 6_4:+23249559 | Msa0982940:intron |
| CAGATTCTCAACAGCAATCC+TGG | 0.396710 | 6_4:-23246353 | None:intergenic |
| CCACCATCAGCTTCGCAATC+TGG | 0.398136 | 6_4:-23246186 | None:intergenic |
| CACGTCTTTGTATTGGAGTT+GGG | 0.398308 | 6_4:+23250102 | Msa0982940:three_prime_UTR |
| TTAGCATCTTCAATTTGCTT+TGG | 0.400918 | 6_4:-23246783 | None:intergenic |
| TACCCTTCAGCAATCCTAAT+AGG | 0.405829 | 6_4:-23246319 | None:intergenic |
| CAACCCTTGTTATTTGCCAA+TGG | 0.407278 | 6_4:+23247164 | Msa0982940:CDS |
| GAATTGATTGCCATAGCAAC+AGG | 0.418257 | 6_4:+23247265 | Msa0982940:CDS |
| ATCAATATCAACCTTATGCT+TGG | 0.422485 | 6_4:-23246850 | None:intergenic |
| CGTGACCGTGTAAACCAATA+TGG | 0.433266 | 6_4:+23245804 | Msa0982940:exon |
| TCAAGATTGAGTTACATTGC+AGG | 0.437085 | 6_4:+23250238 | Msa0982940:three_prime_UTR |
| AACGTGGGATTCATCCTATT+AGG | 0.438166 | 6_4:+23246305 | Msa0982940:CDS |
| CATATGATGACGTCGCCGTC+GGG | 0.441250 | 6_4:-23246000 | None:intergenic |
| GGTGGAGTTGTCGAGGAGTC+AGG | 0.444912 | 6_4:+23246204 | Msa0982940:CDS |
| CTCCCTCGGTCCCAAGGGTA+TGG | 0.444952 | 6_4:+23245960 | Msa0982940:CDS |
| GAATCGAAGAACCGTCTTCG+TGG | 0.447830 | 6_4:+23245877 | Msa0982940:CDS |
| AAGAATTGTTCCTAGGTTCC+AGG | 0.448072 | 6_4:+23247424 | Msa0982940:CDS |
| CCGTACCTCCCTCGGTCCCA+AGG | 0.450538 | 6_4:+23245954 | Msa0982940:CDS |
| GGAGTTAACTGCAGAAAAGT+TGG | 0.452554 | 6_4:+23247445 | Msa0982940:CDS |
| AAGCATCTTATCCATACCCT+TGG | 0.455553 | 6_4:-23245971 | None:intergenic |
| ATGGGTTGGTGGTGTTGAGT+TGG | 0.463335 | 6_4:+23247243 | Msa0982940:CDS |
| TAGATACCCTGGTGTAGAAC+AGG | 0.465187 | 6_4:+23248373 | Msa0982940:CDS |
| TCGAACCAAAACACCGCCAT+AGG | 0.475402 | 6_4:+23245772 | Msa0982940:five_prime_UTR |
| TTGCCAGCTGTTAGATGGGT+TGG | 0.487328 | 6_4:+23247229 | Msa0982940:CDS |
| CGTATTCTCCGTACCTCCCT+CGG | 0.488532 | 6_4:+23245946 | Msa0982940:CDS |
| GAAATCGGTGATGGAACTAC+TGG | 0.496232 | 6_4:+23246232 | Msa0982940:CDS |
| AGCGACGATATTGGAGCAGA+TGG | 0.496717 | 6_4:+23246153 | Msa0982940:CDS |
| CTTCATCGTCAAAACCCCAT+TGG | 0.502021 | 6_4:-23247180 | None:intergenic |
| AATGCTCAATGTACAGCATT+CGG | 0.502628 | 6_4:-23247695 | None:intergenic |
| TTTGCTTTGGCATTTGAGGA+TGG | 0.503760 | 6_4:-23246770 | None:intergenic |
| AAGATATATTAGTACTCAGA+TGG | 0.504953 | 6_4:-23249961 | None:intergenic |
| GCAGTTAACTCCTGGAACCT+AGG | 0.506692 | 6_4:-23247434 | None:intergenic |
| TGCTTTGGAGTCGATTCCTA+TGG | 0.507540 | 6_4:+23249584 | Msa0982940:CDS |
| GATTGCTGAAGGGTATGAAA+TGG | 0.509686 | 6_4:+23246327 | Msa0982940:CDS |
| TTGAGCATTGTGCAAACTCA+AGG | 0.510053 | 6_4:+23247709 | Msa0982940:CDS |
| GGCATTGATTGCAATGATGT+TGG | 0.511857 | 6_4:+23249823 | Msa0982940:CDS |
| GAGTTAACTGCAGAAAAGTT+GGG | 0.512302 | 6_4:+23247446 | Msa0982940:CDS |
| AGGAGTCAGGACTATGAAAT+CGG | 0.512722 | 6_4:+23246217 | Msa0982940:CDS |
| CAAATCATCTCTTGATGCAC+AGG | 0.514162 | 6_4:+23247203 | Msa0982940:CDS |
| TTTGGTTCGAAACTGCGATC+GGG | 0.518431 | 6_4:-23245759 | None:intergenic |
| ATTAAAGTAGAAGGAAAGGT+TGG | 0.519658 | 6_4:+23246690 | Msa0982940:CDS |
| TACATTGCAGGATTGTGTGC+TGG | 0.519676 | 6_4:+23250250 | Msa0982940:three_prime_UTR |
| CCAGCTGTTAGATGGGTTGG+TGG | 0.521172 | 6_4:+23247232 | Msa0982940:CDS |
| ATTCAAGGCTGGCATCGTTA+GGG | 0.521490 | 6_4:+23247647 | Msa0982940:intron |
| AGCATCTTATCCATACCCTT+GGG | 0.526337 | 6_4:-23245970 | None:intergenic |
| TGAAAGCATACCTGTTGCTA+TGG | 0.526459 | 6_4:-23247275 | None:intergenic |
| AACGTCTTTGAGACTTTGAT+CGG | 0.527660 | 6_4:+23249868 | Msa0982940:CDS |
| GAACTTGCCAGCTGTTAGAT+GGG | 0.529474 | 6_4:+23247225 | Msa0982940:CDS |
| AAGGTGGAAGAATTGTTCCT+AGG | 0.532762 | 6_4:+23247417 | Msa0982940:intron |
| TGTGAAGTCTCAGCAAATAA+CGG | 0.532861 | 6_4:+23249653 | Msa0982940:CDS |
| CCTTGGGACCGAGGGAGGTA+CGG | 0.537090 | 6_4:-23245954 | None:intergenic |
| ACCCTTGTTATTTGCCAATG+GGG | 0.538387 | 6_4:+23247166 | Msa0982940:CDS |
| AGATATATTAGTACTCAGAT+GGG | 0.538795 | 6_4:-23249960 | None:intergenic |
| ATGGCCCTTGCGGAAAATAG+TGG | 0.540167 | 6_4:+23249603 | Msa0982940:CDS |
| ATTAATGTTGCAGTGTGAAT+CGG | 0.540958 | 6_4:+23246583 | Msa0982940:intron |
| AAGGGTATGAAATGGCGTCC+AGG | 0.542596 | 6_4:+23246335 | Msa0982940:CDS |
| ATCCATACCCTTGGGACCGA+GGG | 0.544446 | 6_4:-23245962 | None:intergenic |
| ACTGGAGTAGTTGTGTTGGC+TGG | 0.546101 | 6_4:+23246250 | Msa0982940:CDS |
| CGTGTAAACCAATATGGCGC+TGG | 0.546887 | 6_4:+23245810 | Msa0982940:exon |
| AACCCCATTGGCAAATAACA+AGG | 0.547165 | 6_4:-23247168 | None:intergenic |
| TATGTTGATCTGCAGGATGT+AGG | 0.549314 | 6_4:+23247139 | Msa0982940:intron |
| CATCCTATTAGGATTGCTGA+AGG | 0.555989 | 6_4:+23246316 | Msa0982940:CDS |
| TCTGATTAAAGTAGAAGGAA+AGG | 0.558317 | 6_4:+23246686 | Msa0982940:CDS |
| TATTGCCGTGGAGGCAGCTG+CGG | 0.559909 | 6_4:+23248349 | Msa0982940:CDS |
| GTCATACAAGTCTGAATCAA+CGG | 0.560241 | 6_4:-23246421 | None:intergenic |
| ATAACATTGTGCAATGGTGC+AGG | 0.561438 | 6_4:+23250280 | Msa0982940:three_prime_UTR |
| AAGTAGAAGGAAAGGTTGGT+GGG | 0.562439 | 6_4:+23246694 | Msa0982940:CDS |
| CGAACCAAAACACCGCCATA+GGG | 0.564081 | 6_4:+23245773 | Msa0982940:five_prime_UTR |
| CCACCAACCCATCTAACAGC+TGG | 0.565017 | 6_4:-23247232 | None:intergenic |
| AGCAGAGATTGCTGTGAAAG+CGG | 0.565406 | 6_4:+23246620 | Msa0982940:CDS |
| AATTCAATTGTGTATGGTGG+TGG | 0.567875 | 6_4:+23248305 | Msa0982940:CDS |
| GCTGTAACAATATTCATTCG+TGG | 0.573464 | 6_4:+23247732 | Msa0982940:CDS |
| AAAGTAGAAGGAAAGGTTGG+TGG | 0.573563 | 6_4:+23246693 | Msa0982940:CDS |
| AGCTGATGGTGGAGTTGTCG+AGG | 0.578499 | 6_4:+23246197 | Msa0982940:CDS |
| GTCGATTCCTATGGCCCTTG+CGG | 0.578950 | 6_4:+23249593 | Msa0982940:CDS |
| AACTGCAGAAAAGTTGGGAA+AGG | 0.579205 | 6_4:+23247451 | Msa0982940:CDS |
| CAGCGCCATATTGGTTTACA+CGG | 0.580699 | 6_4:-23245809 | None:intergenic |
| CGTACCTCCCTCGGTCCCAA+GGG | 0.585314 | 6_4:+23245955 | Msa0982940:CDS |
| TCAAGATGCAGAATTGCTGA+TGG | 0.586308 | 6_4:+23250005 | Msa0982940:three_prime_UTR |
| TTGCTGTTGCTGATCTAGAG+AGG | 0.592013 | 6_4:+23246646 | Msa0982940:CDS |
| ACATATGATGACGTCGCCGT+CGG | 0.592176 | 6_4:-23246001 | None:intergenic |
| ATGCATACCTGTTCTACACC+AGG | 0.592892 | 6_4:-23248380 | None:intergenic |
| TCTTCGATTCTTGTTCTCTG+AGG | 0.593724 | 6_4:-23245864 | None:intergenic |
| CAGGACTATGAAATCGGTGA+TGG | 0.595822 | 6_4:+23246223 | Msa0982940:CDS |
| GAAATTGGAAGATACTGAGT+TGG | 0.598794 | 6_4:+23246716 | Msa0982940:CDS |
| GCGCTGGCTTTCGATGAGTA+CGG | 0.602151 | 6_4:+23245826 | Msa0982940:CDS |
| GCAGCTGCGGATAGATACCC+TGG | 0.603416 | 6_4:+23248362 | Msa0982940:CDS |
| CAACCAGATTGCGAAGCTGA+TGG | 0.607157 | 6_4:+23246183 | Msa0982940:CDS |
| TGGAGAAGTTTCAGACGTTG+AGG | 0.608157 | 6_4:+23246877 | Msa0982940:CDS |
| GAGCATCGAGACCACGAAGA+CGG | 0.609862 | 6_4:-23245888 | None:intergenic |
| TAAGGTTGATATTGATACAG+TGG | 0.610608 | 6_4:+23246857 | Msa0982940:CDS |
| TATCCATACCCTTGGGACCG+AGG | 0.612999 | 6_4:-23245963 | None:intergenic |
| TGGCTTTCGATGAGTACGGA+AGG | 0.617831 | 6_4:+23245830 | Msa0982940:CDS |
| AACTACTGGAGTAGTTGTGT+TGG | 0.618822 | 6_4:+23246246 | Msa0982940:CDS |
| CCAGATTGCGAAGCTGATGG+TGG | 0.619787 | 6_4:+23246186 | Msa0982940:CDS |
| ATATGGAATCATTGTTGACA+AGG | 0.619909 | 6_4:+23246740 | Msa0982940:CDS |
| GTATGCAATTAGAGCATTTG+GGG | 0.621724 | 6_4:+23249560 | Msa0982940:intron |
| TGCATGCTCTATTGCCGTGG+AGG | 0.622636 | 6_4:+23248340 | Msa0982940:CDS |
| TCTATCCGCAGCTGCCTCCA+CGG | 0.622675 | 6_4:-23248354 | None:intergenic |
| CAGAAAGCTAACATCTCCGC+CGG | 0.623005 | 6_4:+23245910 | Msa0982940:CDS |
| GGTCACGATCCAAAACCCTA+TGG | 0.624975 | 6_4:-23245788 | None:intergenic |
| TGAGCATTGTGCAAACTCAA+GGG | 0.627646 | 6_4:+23247710 | Msa0982940:CDS |
| CATACCCTTGGGACCGAGGG+AGG | 0.629850 | 6_4:-23245959 | None:intergenic |
| GATTGCATGCTCTATTGCCG+TGG | 0.631363 | 6_4:+23248337 | Msa0982940:CDS |
| TTGCAATCAATGCCAAAGTG+AGG | 0.646416 | 6_4:-23249814 | None:intergenic |
| CTCTTCTCGAGCAAGCTGAG+AGG | 0.647309 | 6_4:+23246275 | Msa0982940:CDS |
| AGGTAACAAAATGATCATTG+AGG | 0.649249 | 6_4:+23248226 | Msa0982940:intron |
| TGACATGGTTCAACAATGCA+AGG | 0.652286 | 6_4:+23246923 | Msa0982940:CDS |
| ATCCTATTAGGATTGCTGAA+GGG | 0.653489 | 6_4:+23246317 | Msa0982940:CDS |
| ATATGATGACGTCGCCGTCG+GGG | 0.655483 | 6_4:-23245999 | None:intergenic |
| ATGATGCATTGTGTGTGGCT+AGG | 0.656157 | 6_4:+23248267 | Msa0982940:CDS |
| TGTTCTCTGAGGATAATGAA+CGG | 0.665836 | 6_4:-23245853 | None:intergenic |
| GATATATTAGTACTCAGATG+GGG | 0.666907 | 6_4:-23249959 | None:intergenic |
| ACGAGCGACGGCTTTACCGG+CGG | 0.667012 | 6_4:-23245926 | None:intergenic |
| TGCATACCTGTTCTACACCA+GGG | 0.668346 | 6_4:-23248379 | None:intergenic |
| AATAATTCAATTGTGTATGG+TGG | 0.668688 | 6_4:+23248302 | Msa0982940:CDS |
| TGCGATCGGGAAAATGAGAG+TGG | 0.671799 | 6_4:-23245746 | None:intergenic |
| ATGTTGGCACCAATGACATG+AGG | 0.676772 | 6_4:+23249839 | Msa0982940:CDS |
| ACCCCATTGGCAAATAACAA+GGG | 0.683763 | 6_4:-23247167 | None:intergenic |
| AAGATGCTTCAAAGCCCCGA+CGG | 0.693490 | 6_4:+23245985 | Msa0982940:CDS |
| TATTCATGATGCATTGTGTG+TGG | 0.693925 | 6_4:+23248262 | Msa0982940:CDS |
| TAAGCTATAACATTGTGCAA+TGG | 0.697406 | 6_4:+23250274 | Msa0982940:three_prime_UTR |
| CACGATCCAAAACCCTATGG+CGG | 0.707942 | 6_4:-23245785 | None:intergenic |
| GTAACAATATTCATTCGTGG+AGG | 0.711015 | 6_4:+23247735 | Msa0982940:CDS |
| TGTTGGCACCAATGACATGA+GGG | 0.722471 | 6_4:+23249840 | Msa0982940:CDS |
| GGTACGGAGAATACGAGCGA+CGG | 0.723999 | 6_4:-23245938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr6_4:23248055-23248074 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr6_4:23248056-23248075 | None:intergenic | 10.0% |
| !! | TTATTTAATAAAAATAAGCA+GGG | - | chr6_4:23248606-23248625 | None:intergenic | 10.0% |
| !! | TTTATTTAATAAAAATAAGC+AGG | - | chr6_4:23248607-23248626 | None:intergenic | 10.0% |
| !! | AGTAAAATCTTATAAAAATT+TGG | - | chr6_4:23248968-23248987 | None:intergenic | 10.0% |
| !!! | ACTTTACTTTTTTTAAATAA+TGG | + | chr6_4:23249446-23249465 | Msa0982940:intron | 10.0% |
| !! | ATTTCCAAAATAAAAAACTA+GGG | - | chr6_4:23246095-23246114 | None:intergenic | 15.0% |
| !! | AATTTCCAAAATAAAAAACT+AGG | - | chr6_4:23246096-23246115 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr6_4:23247990-23248009 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr6_4:23247991-23248010 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr6_4:23248054-23248073 | None:intergenic | 15.0% |
| !!! | TTTTATTCTATTGTTTTGTA+TGG | - | chr6_4:23248893-23248912 | None:intergenic | 15.0% |
| !!! | ATCTTATAAAAATTTGGTTT+CGG | - | chr6_4:23248962-23248981 | None:intergenic | 15.0% |
| !!! | GATTATAAATTTTAAGCATT+TGG | + | chr6_4:23249183-23249202 | Msa0982940:intron | 15.0% |
| !! | TAAAGTAAATGATCTTTATT+TGG | - | chr6_4:23249432-23249451 | None:intergenic | 15.0% |
| !! | ATTAAAAAATAACCAAATGA+CGG | - | chr6_4:23249505-23249524 | None:intergenic | 15.0% |
| !! | TAGGGTTTAATTGAATATAA+CGG | - | chr6_4:23246064-23246083 | None:intergenic | 20.0% |
| !!! | TTTTTTTTACCTATCTAAGT+AGG | + | chr6_4:23246987-23247006 | Msa0982940:intron | 20.0% |
| !!! | TTTTTTTACCTATCTAAGTA+GGG | + | chr6_4:23246988-23247007 | Msa0982940:intron | 20.0% |
| !!! | CAATTATGATTCTTTTGTTT+TGG | + | chr6_4:23247296-23247315 | Msa0982940:intron | 20.0% |
| !!! | GATTTTCTTTTTGTAAATGA+AGG | + | chr6_4:23247398-23247417 | Msa0982940:intron | 20.0% |
| !!! | ACCTTTCCTTTTTTTTTTTT+GGG | + | chr6_4:23247512-23247531 | Msa0982940:intron | 20.0% |
| !! | GTTAATTTATGATCTATTCA+AGG | + | chr6_4:23247632-23247651 | Msa0982940:intron | 20.0% |
| !!! | TATGTAATTAGTCATCTTTT+AGG | + | chr6_4:23247805-23247824 | Msa0982940:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr6_4:23247921-23247940 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr6_4:23247957-23247976 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr6_4:23247958-23247977 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr6_4:23248031-23248050 | None:intergenic | 20.0% |
| !! | CATATTATATTATTAACCCA+CGG | + | chr6_4:23248400-23248419 | Msa0982940:intron | 20.0% |
| !! | TTGTGGTTAATTTCATAATT+TGG | + | chr6_4:23248568-23248587 | Msa0982940:intron | 20.0% |
| !! | GATCTAATTAATTTCCAAAT+TGG | + | chr6_4:23248663-23248682 | Msa0982940:intron | 20.0% |
| !! | ATTAATTTCCAAATTGGAAA+AGG | + | chr6_4:23248669-23248688 | Msa0982940:intron | 20.0% |
| !! | TTAATTTCCAAATTGGAAAA+GGG | + | chr6_4:23248670-23248689 | Msa0982940:intron | 20.0% |
| !!! | ATAGACAAAAATTCTGAAAA+TGG | + | chr6_4:23248780-23248799 | Msa0982940:intron | 20.0% |
| !! | AAATTTATAATCCTTGTGAT+TGG | - | chr6_4:23249175-23249194 | None:intergenic | 20.0% |
| !! | AATTATAATTTACCGTCATT+TGG | + | chr6_4:23249490-23249509 | Msa0982940:intron | 20.0% |
| !!! | GCATATTTATGTTAAGATTT+TGG | + | chr6_4:23250079-23250098 | Msa0982940:three_prime_UTR | 20.0% |
| ! | AAATGAAATGAAGAGAGAAA+TGG | - | chr6_4:23246035-23246054 | None:intergenic | 25.0% |
| !!! | AAAACTAGGGTTTGATTTTA+GGG | - | chr6_4:23246082-23246101 | None:intergenic | 25.0% |
| !!! | AAAAACTAGGGTTTGATTTT+AGG | - | chr6_4:23246083-23246102 | None:intergenic | 25.0% |
| !!! | CAAACCCTAGTTTTTTATTT+TGG | + | chr6_4:23246088-23246107 | Msa0982940:intron | 25.0% |
| !! | ATTGCTAATAAGTTTGAGTT+TGG | + | chr6_4:23246382-23246401 | Msa0982940:CDS | 25.0% |
| !!! | ACAGAAATATTTTGATGACA+TGG | + | chr6_4:23246908-23246927 | Msa0982940:CDS | 25.0% |
| ! | TATTGGTATTTGAGCTAATT+GGG | + | chr6_4:23247034-23247053 | Msa0982940:intron | 25.0% |
| !! | TTTCTTTTTGTAAATGAAGG+TGG | + | chr6_4:23247401-23247420 | Msa0982940:intron | 25.0% |
| ! | GTAAGCCATAAAAAGAAATA+AGG | - | chr6_4:23247488-23247507 | None:intergenic | 25.0% |
| !!! | GACCTTTCCTTTTTTTTTTT+TGG | + | chr6_4:23247511-23247530 | Msa0982940:intron | 25.0% |
| ! | ACCCAAAAAAAAAAAAGGAA+AGG | - | chr6_4:23247516-23247535 | None:intergenic | 25.0% |
| ! | AGAAGACCCAAAAAAAAAAA+AGG | - | chr6_4:23247521-23247540 | None:intergenic | 25.0% |
| ! | TTTGAATTTACTAGCAATTG+TGG | + | chr6_4:23247543-23247562 | Msa0982940:intron | 25.0% |
| ! | TTGAATTTACTAGCAATTGT+GGG | + | chr6_4:23247544-23247563 | Msa0982940:intron | 25.0% |
| !!! | TCCTTAACATTTTGTTTTAG+TGG | + | chr6_4:23247768-23247787 | Msa0982940:intron | 25.0% |
| ! | ACCACTAAAACAAAATGTTA+AGG | - | chr6_4:23247772-23247791 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr6_4:23247922-23247941 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr6_4:23248032-23248051 | None:intergenic | 25.0% |
| ! | AATAATTCAATTGTGTATGG+TGG | + | chr6_4:23248302-23248321 | Msa0982940:CDS | 25.0% |
| !! | TTAAAGTCGTTCTAAACTTT+AGG | + | chr6_4:23248446-23248465 | Msa0982940:intron | 25.0% |
| ! | TGTTAACACTTAACAATAAC+AGG | - | chr6_4:23248534-23248553 | None:intergenic | 25.0% |
| ! | TAATTTCCAAATTGGAAAAG+GGG | + | chr6_4:23248671-23248690 | Msa0982940:intron | 25.0% |
| !! | GAATTTTTGTCTATGAACAT+TGG | - | chr6_4:23248774-23248793 | None:intergenic | 25.0% |
| !! | ACAAAAATTCTGAAAATGGA+GGG | + | chr6_4:23248784-23248803 | Msa0982940:intron | 25.0% |
| !! | AATACTCAAGAGATAGATTT+TGG | - | chr6_4:23249116-23249135 | None:intergenic | 25.0% |
| ! | TTCACATTATAAGAATGTCT+TGG | + | chr6_4:23249229-23249248 | Msa0982940:intron | 25.0% |
| !! | CTTTCAAACTATTTCTCATT+AGG | - | chr6_4:23249331-23249350 | None:intergenic | 25.0% |
| ! | ATGAGAAATAGTTTGAAAGT+AGG | + | chr6_4:23249332-23249351 | Msa0982940:intron | 25.0% |
| ! | ATTGTACTTGTCTAAATGAT+TGG | - | chr6_4:23249385-23249404 | None:intergenic | 25.0% |
| !!! | TTAATGCTTTTGTTGATTGA+TGG | + | chr6_4:23249520-23249539 | Msa0982940:intron | 25.0% |
| ! | AAGATAATGTTTCAATTGGT+TGG | - | chr6_4:23249632-23249651 | None:intergenic | 25.0% |
| ! | ACAGAAGATAATGTTTCAAT+TGG | - | chr6_4:23249636-23249655 | None:intergenic | 25.0% |
| ! | AGATATATTAGTACTCAGAT+GGG | - | chr6_4:23249963-23249982 | None:intergenic | 25.0% |
| ! | AAGATATATTAGTACTCAGA+TGG | - | chr6_4:23249964-23249983 | None:intergenic | 25.0% |
| ! | TTTTTGTGTATAGCGAATGA+TGG | + | chr6_4:23246130-23246149 | Msa0982940:intron | 30.0% |
| !! | TGAGTTTGGTGAAACTATTT+TGG | + | chr6_4:23246396-23246415 | Msa0982940:CDS | 30.0% |
| ! | TTCACTAAACGCTTACATTT+TGG | - | chr6_4:23246458-23246477 | None:intergenic | 30.0% |
| ATTAATGTTGCAGTGTGAAT+CGG | + | chr6_4:23246583-23246602 | Msa0982940:intron | 30.0% | |
| AGAGAGGAAAGATGTTAATT+TGG | + | chr6_4:23246662-23246681 | Msa0982940:CDS | 30.0% | |
| TTGGATCTGATTAAAGTAGA+AGG | + | chr6_4:23246681-23246700 | Msa0982940:CDS | 30.0% | |
| TCTGATTAAAGTAGAAGGAA+AGG | + | chr6_4:23246686-23246705 | Msa0982940:CDS | 30.0% | |
| ATTAAAGTAGAAGGAAAGGT+TGG | + | chr6_4:23246690-23246709 | Msa0982940:CDS | 30.0% | |
| ATATGGAATCATTGTTGACA+AGG | + | chr6_4:23246740-23246759 | Msa0982940:CDS | 30.0% | |
| ! | TTAGCATCTTCAATTTGCTT+TGG | - | chr6_4:23246786-23246805 | None:intergenic | 30.0% |
| ATCAATATCAACCTTATGCT+TGG | - | chr6_4:23246853-23246872 | None:intergenic | 30.0% | |
| !! | TAAGGTTGATATTGATACAG+TGG | + | chr6_4:23246857-23246876 | Msa0982940:CDS | 30.0% |
| ! | GTATTGGTATTTGAGCTAAT+TGG | + | chr6_4:23247033-23247052 | Msa0982940:intron | 30.0% |
| GTGTTTGCACTTTATTGAAA+AGG | + | chr6_4:23247110-23247129 | Msa0982940:intron | 30.0% | |
| GATTATTTATGTTGATCTGC+AGG | + | chr6_4:23247132-23247151 | Msa0982940:intron | 30.0% | |
| !!! | CTCAGCCTTATTTCTTTTTA+TGG | + | chr6_4:23247480-23247499 | Msa0982940:intron | 30.0% |
| AAAAAAAAAAGGAAAGGTCG+AGG | - | chr6_4:23247510-23247529 | None:intergenic | 30.0% | |
| TGAATTTACTAGCAATTGTG+GGG | + | chr6_4:23247545-23247564 | Msa0982940:intron | 30.0% | |
| AATTGTGGGGAAAGTAATTT+AGG | + | chr6_4:23247558-23247577 | Msa0982940:intron | 30.0% | |
| AAACAGACAACAAGAATCAT+TGG | - | chr6_4:23247591-23247610 | None:intergenic | 30.0% | |
| ATTTATGATCTATTCAAGGC+TGG | + | chr6_4:23247636-23247655 | Msa0982940:intron | 30.0% | |
| !! | TTAGTCATCTTTTAGGAGAT+AGG | + | chr6_4:23247812-23247831 | Msa0982940:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr6_4:23247943-23247962 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr6_4:23247944-23247963 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr6_4:23248047-23248066 | None:intergenic | 30.0% | |
| ! | GGAGGTAGTATAATCTTTTA+TGG | + | chr6_4:23248116-23248135 | Msa0982940:intron | 30.0% |
| TAAATTTGTCAAGATTGCTC+AGG | - | chr6_4:23248177-23248196 | None:intergenic | 30.0% | |
| AGGTAACAAAATGATCATTG+AGG | + | chr6_4:23248226-23248245 | Msa0982940:intron | 30.0% | |
| CGCAATAATTCAATTGTGTA+TGG | + | chr6_4:23248299-23248318 | Msa0982940:CDS | 30.0% | |
| ! | AACCCACGGTTTAATTTATT+TGG | + | chr6_4:23248414-23248433 | Msa0982940:intron | 30.0% |
| ! | ACCCACGGTTTAATTTATTT+GGG | + | chr6_4:23248415-23248434 | Msa0982940:intron | 30.0% |
| TCCCAAATAAATTAAACCGT+GGG | - | chr6_4:23248419-23248438 | None:intergenic | 30.0% | |
| ! | ACAATAGATCTTTGACTTTG+TGG | + | chr6_4:23248551-23248570 | Msa0982940:intron | 30.0% |
| ! | ATTTATCCCCTTTTCCAATT+TGG | - | chr6_4:23248680-23248699 | None:intergenic | 30.0% |
| AGACTAAATATGGAGATAGA+TGG | - | chr6_4:23248743-23248762 | None:intergenic | 30.0% | |
| ! | GACAAAAATTCTGAAAATGG+AGG | + | chr6_4:23248783-23248802 | Msa0982940:intron | 30.0% |
| ! | CAAAAATTCTGAAAATGGAG+GGG | + | chr6_4:23248785-23248804 | Msa0982940:intron | 30.0% |
| AAATGAACTGTTAGTGTATC+AGG | + | chr6_4:23248810-23248829 | Msa0982940:intron | 30.0% | |
| ATTGTATAAACTTCATACCC+TGG | - | chr6_4:23248865-23248884 | None:intergenic | 30.0% | |
| ! | AGTATGCAATTAGAGCATTT+GGG | + | chr6_4:23249559-23249578 | Msa0982940:intron | 30.0% |
| GATATATTAGTACTCAGATG+GGG | - | chr6_4:23249962-23249981 | None:intergenic | 30.0% | |
| ! | GTTTTCCTTTTTCCTGATAA+AGG | + | chr6_4:23250130-23250149 | Msa0982940:three_prime_UTR | 30.0% |
| TAAGCTATAACATTGTGCAA+TGG | + | chr6_4:23250274-23250293 | Msa0982940:three_prime_UTR | 30.0% | |
| TTCACACTCTCACATTCTTT+AGG | + | chr6_4:23245701-23245720 | Msa0982940:five_prime_UTR | 35.0% | |
| TCACACTCTCACATTCTTTA+GGG | + | chr6_4:23245702-23245721 | Msa0982940:five_prime_UTR | 35.0% | |
| ! | TGTTCTCTGAGGATAATGAA+CGG | - | chr6_4:23245856-23245875 | None:intergenic | 35.0% |
| ATCCTATTAGGATTGCTGAA+GGG | + | chr6_4:23246317-23246336 | Msa0982940:CDS | 35.0% | |
| GTCATACAAGTCTGAATCAA+CGG | - | chr6_4:23246424-23246443 | None:intergenic | 35.0% | |
| AGTGAATCGATACATGATCT+TGG | + | chr6_4:23246472-23246491 | Msa0982940:intron | 35.0% | |
| GAAATTGGAAGATACTGAGT+TGG | + | chr6_4:23246716-23246735 | Msa0982940:CDS | 35.0% | |
| !! | GAAGATACTGAGTTGGTATA+TGG | + | chr6_4:23246723-23246742 | Msa0982940:CDS | 35.0% |
| ! | TCAATTTGCTTTGGCATTTG+AGG | - | chr6_4:23246777-23246796 | None:intergenic | 35.0% |
| !!! | TTATGCTTGGTTTTTGGCTT+CGG | - | chr6_4:23246840-23246859 | None:intergenic | 35.0% |
| !! | TCAACCTTATGCTTGGTTTT+TGG | - | chr6_4:23246846-23246865 | None:intergenic | 35.0% |
| !! | AACCCTTGTTATTTGCCAAT+GGG | + | chr6_4:23247165-23247184 | Msa0982940:CDS | 35.0% |
| GAGTTAACTGCAGAAAAGTT+GGG | + | chr6_4:23247446-23247465 | Msa0982940:CDS | 35.0% | |
| !! | ATCGTTAGGGAAAAAGCATT+TGG | + | chr6_4:23247660-23247679 | Msa0982940:CDS | 35.0% |
| AATGCTCAATGTACAGCATT+CGG | - | chr6_4:23247698-23247717 | None:intergenic | 35.0% | |
| GCTGTAACAATATTCATTCG+TGG | + | chr6_4:23247732-23247751 | Msa0982940:CDS | 35.0% | |
| GTAACAATATTCATTCGTGG+AGG | + | chr6_4:23247735-23247754 | Msa0982940:CDS | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr6_4:23247908-23247927 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr6_4:23248077-23248096 | Msa0982940:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr6_4:23248090-23248109 | Msa0982940:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | + | chr6_4:23248091-23248110 | Msa0982940:intron | 35.0% | |
| !! | AAAAAAGCTGCCTTGTTGTT+TGG | + | chr6_4:23248196-23248215 | Msa0982940:intron | 35.0% |
| TATTCATGATGCATTGTGTG+TGG | + | chr6_4:23248262-23248281 | Msa0982940:CDS | 35.0% | |
| AATTCAATTGTGTATGGTGG+TGG | + | chr6_4:23248305-23248324 | Msa0982940:CDS | 35.0% | |
| CTCCCAAATAAATTAAACCG+TGG | - | chr6_4:23248420-23248439 | None:intergenic | 35.0% | |
| GGCAAAGTGAAGACTAAATA+TGG | - | chr6_4:23248753-23248772 | None:intergenic | 35.0% | |
| !!! | TCTTGTCCTTTATTTTGTCC+AGG | + | chr6_4:23248844-23248863 | Msa0982940:intron | 35.0% |
| !!! | CTTGTCCTTTATTTTGTCCA+GGG | + | chr6_4:23248845-23248864 | Msa0982940:intron | 35.0% |
| TCATACCCTGGACAAAATAA+AGG | - | chr6_4:23248853-23248872 | None:intergenic | 35.0% | |
| TCTGATATGTTGCAGTTTCT+GGG | - | chr6_4:23248939-23248958 | None:intergenic | 35.0% | |
| GTGATCAAAAGTTCATCTGA+AGG | + | chr6_4:23249040-23249059 | Msa0982940:intron | 35.0% | |
| ! | TTCATCTGAAGGTATGAAGA+GGG | + | chr6_4:23249051-23249070 | Msa0982940:intron | 35.0% |
| TATAATCCTTGTGATTGGTG+TGG | - | chr6_4:23249170-23249189 | None:intergenic | 35.0% | |
| TGTCTATTTGAGAAGAGTTG+TGG | - | chr6_4:23249272-23249291 | None:intergenic | 35.0% | |
| GGCATGTAAATTGACACAAA+TGG | + | chr6_4:23249353-23249372 | Msa0982940:intron | 35.0% | |
| ! | CAGTATGCAATTAGAGCATT+TGG | + | chr6_4:23249558-23249577 | Msa0982940:intron | 35.0% |
| ! | GTATGCAATTAGAGCATTTG+GGG | + | chr6_4:23249560-23249579 | Msa0982940:intron | 35.0% |
| TGTGAAGTCTCAGCAAATAA+CGG | + | chr6_4:23249653-23249672 | Msa0982940:CDS | 35.0% | |
| GCATGAGCATAGTAATAATC+AGG | - | chr6_4:23249705-23249724 | None:intergenic | 35.0% | |
| AAAGTCAATGTCATGATGTG+CGG | - | chr6_4:23249771-23249790 | None:intergenic | 35.0% | |
| !! | AACGTCTTTGAGACTTTGAT+CGG | + | chr6_4:23249868-23249887 | Msa0982940:CDS | 35.0% |
| !! | ATTTTGGCACGTCTTTGTAT+TGG | + | chr6_4:23250095-23250114 | Msa0982940:three_prime_UTR | 35.0% |
| ATCGACCTTTATCAGGAAAA+AGG | - | chr6_4:23250138-23250157 | None:intergenic | 35.0% | |
| AAGAACAATCGACCTTTATC+AGG | - | chr6_4:23250145-23250164 | None:intergenic | 35.0% | |
| TCAAGATTGAGTTACATTGC+AGG | + | chr6_4:23250238-23250257 | Msa0982940:three_prime_UTR | 35.0% | |
| !!! | TTTTGGTTCGAAACTGCGAT+CGG | - | chr6_4:23245763-23245782 | None:intergenic | 40.0% |
| TCTTCGATTCTTGTTCTCTG+AGG | - | chr6_4:23245867-23245886 | None:intergenic | 40.0% | |
| AGCATCTTATCCATACCCTT+GGG | - | chr6_4:23245973-23245992 | None:intergenic | 40.0% | |
| AAGCATCTTATCCATACCCT+TGG | - | chr6_4:23245974-23245993 | None:intergenic | 40.0% | |
| AGGAGTCAGGACTATGAAAT+CGG | + | chr6_4:23246217-23246236 | Msa0982940:CDS | 40.0% | |
| AACTACTGGAGTAGTTGTGT+TGG | + | chr6_4:23246246-23246265 | Msa0982940:CDS | 40.0% | |
| AACGTGGGATTCATCCTATT+AGG | + | chr6_4:23246305-23246324 | Msa0982940:CDS | 40.0% | |
| CATCCTATTAGGATTGCTGA+AGG | + | chr6_4:23246316-23246335 | Msa0982940:CDS | 40.0% | |
| TACCCTTCAGCAATCCTAAT+AGG | - | chr6_4:23246322-23246341 | None:intergenic | 40.0% | |
| ! | GATTGCTGAAGGGTATGAAA+TGG | + | chr6_4:23246327-23246346 | Msa0982940:CDS | 40.0% |
| AAAGTAGAAGGAAAGGTTGG+TGG | + | chr6_4:23246693-23246712 | Msa0982940:CDS | 40.0% | |
| ! | AAGTAGAAGGAAAGGTTGGT+GGG | + | chr6_4:23246694-23246713 | Msa0982940:CDS | 40.0% |
| TTTGCTTTGGCATTTGAGGA+TGG | - | chr6_4:23246773-23246792 | None:intergenic | 40.0% | |
| !!! | TATGCTTGGTTTTTGGCTTC+GGG | - | chr6_4:23246839-23246858 | None:intergenic | 40.0% |
| GAAGCCAAAAACCAAGCATA+AGG | + | chr6_4:23246839-23246858 | Msa0982940:CDS | 40.0% | |
| TGACATGGTTCAACAATGCA+AGG | + | chr6_4:23246923-23246942 | Msa0982940:CDS | 40.0% | |
| ATGGTTCAACAATGCAAGGT+TGG | + | chr6_4:23246927-23246946 | Msa0982940:intron | 40.0% | |
| CACTTGCTCTTTACTGGTAT+TGG | + | chr6_4:23247017-23247036 | Msa0982940:intron | 40.0% | |
| AAGTGCAAACACATTCTAGC+AGG | - | chr6_4:23247102-23247121 | None:intergenic | 40.0% | |
| TATGTTGATCTGCAGGATGT+AGG | + | chr6_4:23247139-23247158 | Msa0982940:intron | 40.0% | |
| !! | CAACCCTTGTTATTTGCCAA+TGG | + | chr6_4:23247164-23247183 | Msa0982940:CDS | 40.0% |
| !! | ACCCTTGTTATTTGCCAATG+GGG | + | chr6_4:23247166-23247185 | Msa0982940:CDS | 40.0% |
| ACCCCATTGGCAAATAACAA+GGG | - | chr6_4:23247170-23247189 | None:intergenic | 40.0% | |
| AACCCCATTGGCAAATAACA+AGG | - | chr6_4:23247171-23247190 | None:intergenic | 40.0% | |
| CAAATCATCTCTTGATGCAC+AGG | + | chr6_4:23247203-23247222 | Msa0982940:CDS | 40.0% | |
| GAATTGATTGCCATAGCAAC+AGG | + | chr6_4:23247265-23247284 | Msa0982940:CDS | 40.0% | |
| ! | TGAAAGCATACCTGTTGCTA+TGG | - | chr6_4:23247278-23247297 | None:intergenic | 40.0% |
| AAGGTGGAAGAATTGTTCCT+AGG | + | chr6_4:23247417-23247436 | Msa0982940:intron | 40.0% | |
| AAGAATTGTTCCTAGGTTCC+AGG | + | chr6_4:23247424-23247443 | Msa0982940:CDS | 40.0% | |
| ! | ACTTTTCTGCAGTTAACTCC+TGG | - | chr6_4:23247445-23247464 | None:intergenic | 40.0% |
| GGAGTTAACTGCAGAAAAGT+TGG | + | chr6_4:23247445-23247464 | Msa0982940:CDS | 40.0% | |
| AACTGCAGAAAAGTTGGGAA+AGG | + | chr6_4:23247451-23247470 | Msa0982940:CDS | 40.0% | |
| ! | TTGAGCATTGTGCAAACTCA+AGG | + | chr6_4:23247709-23247728 | Msa0982940:CDS | 40.0% |
| ! | TGAGCATTGTGCAAACTCAA+GGG | + | chr6_4:23247710-23247729 | Msa0982940:CDS | 40.0% |
| AATATTCATTCGTGGAGGTG+AGG | + | chr6_4:23247740-23247759 | Msa0982940:intron | 40.0% | |
| !! | GTCATCTTTTAGGAGATAGG+TGG | + | chr6_4:23247815-23247834 | Msa0982940:intron | 40.0% |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr6_4:23247907-23247926 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr6_4:23248093-23248112 | None:intergenic | 40.0% | |
| GCTGAAAGTGAATGTTCAAG+AGG | - | chr6_4:23248486-23248505 | None:intergenic | 40.0% | |
| GTCTGATATGTTGCAGTTTC+TGG | - | chr6_4:23248940-23248959 | None:intergenic | 40.0% | |
| ! | GTTCATCTGAAGGTATGAAG+AGG | + | chr6_4:23249050-23249069 | Msa0982940:intron | 40.0% |
| TAATAGCCACACCAATCACA+AGG | + | chr6_4:23249161-23249180 | Msa0982940:intron | 40.0% | |
| TGCTCTAATTGCATACTGCA+GGG | - | chr6_4:23249556-23249575 | None:intergenic | 40.0% | |
| ATGCTCTAATTGCATACTGC+AGG | - | chr6_4:23249557-23249576 | None:intergenic | 40.0% | |
| TTGACTTTAACCTTACCTGC+AGG | + | chr6_4:23249783-23249802 | Msa0982940:intron | 40.0% | |
| CAGGAGAAAAATCCTCACTT+TGG | + | chr6_4:23249802-23249821 | Msa0982940:intron | 40.0% | |
| TTGCAATCAATGCCAAAGTG+AGG | - | chr6_4:23249817-23249836 | None:intergenic | 40.0% | |
| !! | GGCATTGATTGCAATGATGT+TGG | + | chr6_4:23249823-23249842 | Msa0982940:CDS | 40.0% |
| TCAAGATGCAGAATTGCTGA+TGG | + | chr6_4:23250005-23250024 | Msa0982940:three_prime_UTR | 40.0% | |
| CACGTCTTTGTATTGGAGTT+GGG | + | chr6_4:23250102-23250121 | Msa0982940:three_prime_UTR | 40.0% | |
| ATTATGAATTCGTGAAGCCC+TGG | + | chr6_4:23250197-23250216 | Msa0982940:intron | 40.0% | |
| TTATGAATTCGTGAAGCCCT+GGG | + | chr6_4:23250198-23250217 | Msa0982940:intron | 40.0% | |
| AACAGTAGTTCAACTTCCCA+GGG | - | chr6_4:23250217-23250236 | None:intergenic | 40.0% | |
| ATAACATTGTGCAATGGTGC+AGG | + | chr6_4:23250280-23250299 | Msa0982940:three_prime_UTR | 40.0% | |
| ! | TTTGGTTCGAAACTGCGATC+GGG | - | chr6_4:23245762-23245781 | None:intergenic | 45.0% |
| ! | AAAACCCTATGGCGGTGTTT+TGG | - | chr6_4:23245780-23245799 | None:intergenic | 45.0% |
| ! | AAAACACCGCCATAGGGTTT+TGG | + | chr6_4:23245779-23245798 | Msa0982940:five_prime_UTR | 45.0% |
| CGTGACCGTGTAAACCAATA+TGG | + | chr6_4:23245804-23245823 | Msa0982940:exon | 45.0% | |
| !! | CAGCGCCATATTGGTTTACA+CGG | - | chr6_4:23245812-23245831 | None:intergenic | 45.0% |
| ! | GAATGATGGAGCGACGATAT+TGG | + | chr6_4:23246144-23246163 | Msa0982940:CDS | 45.0% |
| CAGGACTATGAAATCGGTGA+TGG | + | chr6_4:23246223-23246242 | Msa0982940:CDS | 45.0% | |
| !! | GAAATCGGTGATGGAACTAC+TGG | + | chr6_4:23246232-23246251 | Msa0982940:CDS | 45.0% |
| CAGATTCTCAACAGCAATCC+TGG | - | chr6_4:23246356-23246375 | None:intergenic | 45.0% | |
| ! | CAGGATTGCTGTTGAGAATC+TGG | + | chr6_4:23246354-23246373 | Msa0982940:CDS | 45.0% |
| AGCAGAGATTGCTGTGAAAG+CGG | + | chr6_4:23246620-23246639 | Msa0982940:CDS | 45.0% | |
| ! | TTGCTGTTGCTGATCTAGAG+AGG | + | chr6_4:23246646-23246665 | Msa0982940:CDS | 45.0% |
| !! | AGGAAAGGTTGGTGGGAAAT+TGG | + | chr6_4:23246701-23246720 | Msa0982940:CDS | 45.0% |
| !!! | ATGCTTGGTTTTTGGCTTCG+GGG | - | chr6_4:23246838-23246857 | None:intergenic | 45.0% |
| TGGAGAAGTTTCAGACGTTG+AGG | + | chr6_4:23246877-23246896 | Msa0982940:CDS | 45.0% | |
| TGACAGTGCCCTACTTAGAT+AGG | - | chr6_4:23246999-23247018 | None:intergenic | 45.0% | |
| ! | CACTGTCACTTGCTCTTTAC+TGG | + | chr6_4:23247011-23247030 | Msa0982940:intron | 45.0% |
| CTTCATCGTCAAAACCCCAT+TGG | - | chr6_4:23247183-23247202 | None:intergenic | 45.0% | |
| GAACTTGCCAGCTGTTAGAT+GGG | + | chr6_4:23247225-23247244 | Msa0982940:CDS | 45.0% | |
| TATTCAAGGCTGGCATCGTT+AGG | + | chr6_4:23247646-23247665 | Msa0982940:intron | 45.0% | |
| ATTCAAGGCTGGCATCGTTA+GGG | + | chr6_4:23247647-23247666 | Msa0982940:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr6_4:23248095-23248114 | Msa0982940:intron | 45.0% | |
| AGATTATACTACCTCCGTCC+CGG | - | chr6_4:23248112-23248131 | None:intergenic | 45.0% | |
| !! | GCTGCCTTGTTGTTTGGTAA+TGG | + | chr6_4:23248202-23248221 | Msa0982940:intron | 45.0% |
| CCTGCCATTACCAAACAACA+AGG | - | chr6_4:23248209-23248228 | None:intergenic | 45.0% | |
| !! | CCTTGTTGTTTGGTAATGGC+AGG | + | chr6_4:23248206-23248225 | Msa0982940:intron | 45.0% |
| ATGATGCATTGTGTGTGGCT+AGG | + | chr6_4:23248267-23248286 | Msa0982940:CDS | 45.0% | |
| TAGATACCCTGGTGTAGAAC+AGG | + | chr6_4:23248373-23248392 | Msa0982940:CDS | 45.0% | |
| TGCATACCTGTTCTACACCA+GGG | - | chr6_4:23248382-23248401 | None:intergenic | 45.0% | |
| ATGCATACCTGTTCTACACC+AGG | - | chr6_4:23248383-23248402 | None:intergenic | 45.0% | |
| ATGGCAAACATCACGACATC+AGG | - | chr6_4:23248724-23248743 | None:intergenic | 45.0% | |
| AGGGAATCTGCATGAGTCAT+GGG | + | chr6_4:23249070-23249089 | Msa0982940:intron | 45.0% | |
| GAATTTGACAAGACACGCAG+TGG | + | chr6_4:23249300-23249319 | Msa0982940:intron | 45.0% | |
| GCTCTAATTGCATACTGCAG+GGG | - | chr6_4:23249555-23249574 | None:intergenic | 45.0% | |
| ! | TAGAGCATTTGGGGATGCTT+TGG | + | chr6_4:23249569-23249588 | Msa0982940:CDS | 45.0% |
| !! | TGCTTTGGAGTCGATTCCTA+TGG | + | chr6_4:23249584-23249603 | Msa0982940:CDS | 45.0% |
| ! | GAGACCACTATTTTCCGCAA+GGG | - | chr6_4:23249610-23249629 | None:intergenic | 45.0% |
| ! | GGATTTTTCTCCTGCAGGTA+AGG | - | chr6_4:23249796-23249815 | None:intergenic | 45.0% |
| ! | AGTGAGGATTTTTCTCCTGC+AGG | - | chr6_4:23249801-23249820 | None:intergenic | 45.0% |
| ATGTTGGCACCAATGACATG+AGG | + | chr6_4:23249839-23249858 | Msa0982940:CDS | 45.0% | |
| TGTTGGCACCAATGACATGA+GGG | + | chr6_4:23249840-23249859 | Msa0982940:CDS | 45.0% | |
| ! | GTTTTGCTCCCTCATGTCAT+TGG | - | chr6_4:23249851-23249870 | None:intergenic | 45.0% |
| GCACGTCTTTGTATTGGAGT+TGG | + | chr6_4:23250101-23250120 | Msa0982940:three_prime_UTR | 45.0% | |
| CAACAGTAGTTCAACTTCCC+AGG | - | chr6_4:23250218-23250237 | None:intergenic | 45.0% | |
| TACATTGCAGGATTGTGTGC+TGG | + | chr6_4:23250250-23250269 | Msa0982940:three_prime_UTR | 45.0% | |
| TGCGATCGGGAAAATGAGAG+TGG | - | chr6_4:23245749-23245768 | None:intergenic | 50.0% | |
| TCGAACCAAAACACCGCCAT+AGG | + | chr6_4:23245772-23245791 | Msa0982940:five_prime_UTR | 50.0% | |
| CGAACCAAAACACCGCCATA+GGG | + | chr6_4:23245773-23245792 | Msa0982940:five_prime_UTR | 50.0% | |
| CACGATCCAAAACCCTATGG+CGG | - | chr6_4:23245788-23245807 | None:intergenic | 50.0% | |
| GGTCACGATCCAAAACCCTA+TGG | - | chr6_4:23245791-23245810 | None:intergenic | 50.0% | |
| CGTGTAAACCAATATGGCGC+TGG | + | chr6_4:23245810-23245829 | Msa0982940:exon | 50.0% | |
| ATCGAAAGCCAGCGCCATAT+TGG | - | chr6_4:23245821-23245840 | None:intergenic | 50.0% | |
| TGGCTTTCGATGAGTACGGA+AGG | + | chr6_4:23245830-23245849 | Msa0982940:CDS | 50.0% | |
| GAATCGAAGAACCGTCTTCG+TGG | + | chr6_4:23245877-23245896 | Msa0982940:CDS | 50.0% | |
| CAGAAAGCTAACATCTCCGC+CGG | + | chr6_4:23245910-23245929 | Msa0982940:CDS | 50.0% | |
| AATACGAGCGACGGCTTTAC+CGG | - | chr6_4:23245932-23245951 | None:intergenic | 50.0% | |
| AAGATGCTTCAAAGCCCCGA+CGG | + | chr6_4:23245985-23246004 | Msa0982940:CDS | 50.0% | |
| ! | ACATATGATGACGTCGCCGT+CGG | - | chr6_4:23246004-23246023 | None:intergenic | 50.0% |
| AGCGACGATATTGGAGCAGA+TGG | + | chr6_4:23246153-23246172 | Msa0982940:CDS | 50.0% | |
| CAACCAGATTGCGAAGCTGA+TGG | + | chr6_4:23246183-23246202 | Msa0982940:CDS | 50.0% | |
| ! | ACTGGAGTAGTTGTGTTGGC+TGG | + | chr6_4:23246250-23246269 | Msa0982940:CDS | 50.0% |
| !!! | CTGAGAGGCTTTTGGAACGT+GGG | + | chr6_4:23246290-23246309 | Msa0982940:CDS | 50.0% |
| ! | AAGGGTATGAAATGGCGTCC+AGG | + | chr6_4:23246335-23246354 | Msa0982940:CDS | 50.0% |
| !!! | TGCTTGGTTTTTGGCTTCGG+GGG | - | chr6_4:23246837-23246856 | None:intergenic | 50.0% |
| GGAACTTGCCAGCTGTTAGA+TGG | + | chr6_4:23247224-23247243 | Msa0982940:CDS | 50.0% | |
| TTGCCAGCTGTTAGATGGGT+TGG | + | chr6_4:23247229-23247248 | Msa0982940:CDS | 50.0% | |
| !! | ATGGGTTGGTGGTGTTGAGT+TGG | + | chr6_4:23247243-23247262 | Msa0982940:CDS | 50.0% |
| GCAGTTAACTCCTGGAACCT+AGG | - | chr6_4:23247437-23247456 | None:intergenic | 50.0% | |
| GAATATTACTCCCTCCGTCC+CGG | + | chr6_4:23247886-23247905 | Msa0982940:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr6_4:23247903-23247922 | None:intergenic | 50.0% | |
| GATTGCATGCTCTATTGCCG+TGG | + | chr6_4:23248337-23248356 | Msa0982940:CDS | 50.0% | |
| GAGGGAATCTGCATGAGTCA+TGG | + | chr6_4:23249069-23249088 | Msa0982940:intron | 50.0% | |
| ! | CTATTTTCCGCAAGGGCCAT+AGG | - | chr6_4:23249603-23249622 | None:intergenic | 50.0% |
| ATGGCCCTTGCGGAAAATAG+TGG | + | chr6_4:23249603-23249622 | Msa0982940:CDS | 50.0% | |
| ! | GGAGACCACTATTTTCCGCA+AGG | - | chr6_4:23249611-23249630 | None:intergenic | 50.0% |
| !! | GCGCTGGCTTTCGATGAGTA+CGG | + | chr6_4:23245826-23245845 | Msa0982940:CDS | 55.0% |
| !! | GAGCATCGAGACCACGAAGA+CGG | - | chr6_4:23245891-23245910 | None:intergenic | 55.0% |
| GGTACGGAGAATACGAGCGA+CGG | - | chr6_4:23245941-23245960 | None:intergenic | 55.0% | |
| CGTATTCTCCGTACCTCCCT+CGG | + | chr6_4:23245946-23245965 | Msa0982940:CDS | 55.0% | |
| ATCCATACCCTTGGGACCGA+GGG | - | chr6_4:23245965-23245984 | None:intergenic | 55.0% | |
| TATCCATACCCTTGGGACCG+AGG | - | chr6_4:23245966-23245985 | None:intergenic | 55.0% | |
| ! | ATATGATGACGTCGCCGTCG+GGG | - | chr6_4:23246002-23246021 | None:intergenic | 55.0% |
| ! | CATATGATGACGTCGCCGTC+GGG | - | chr6_4:23246003-23246022 | None:intergenic | 55.0% |
| CCACCATCAGCTTCGCAATC+TGG | - | chr6_4:23246189-23246208 | None:intergenic | 55.0% | |
| CCAGATTGCGAAGCTGATGG+TGG | + | chr6_4:23246186-23246205 | Msa0982940:CDS | 55.0% | |
| !! | AGCTGATGGTGGAGTTGTCG+AGG | + | chr6_4:23246197-23246216 | Msa0982940:CDS | 55.0% |
| CTCTTCTCGAGCAAGCTGAG+AGG | + | chr6_4:23246275-23246294 | Msa0982940:CDS | 55.0% | |
| ! | CGAGCAAGCTGAGAGGCTTT+TGG | + | chr6_4:23246282-23246301 | Msa0982940:CDS | 55.0% |
| !!! | GCTGAGAGGCTTTTGGAACG+TGG | + | chr6_4:23246289-23246308 | Msa0982940:CDS | 55.0% |
| TTGGCTTCGGGGGCTCAAAT+GGG | - | chr6_4:23246827-23246846 | None:intergenic | 55.0% | |
| ! | TTTGGCTTCGGGGGCTCAAA+TGG | - | chr6_4:23246828-23246847 | None:intergenic | 55.0% |
| CCACCAACCCATCTAACAGC+TGG | - | chr6_4:23247235-23247254 | None:intergenic | 55.0% | |
| !! | CCAGCTGTTAGATGGGTTGG+TGG | + | chr6_4:23247232-23247251 | Msa0982940:CDS | 55.0% |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr6_4:23247899-23247918 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr6_4:23248098-23248117 | Msa0982940:intron | 55.0% | |
| TGCATGCTCTATTGCCGTGG+AGG | + | chr6_4:23248340-23248359 | Msa0982940:CDS | 55.0% | |
| ! | GTCGATTCCTATGGCCCTTG+CGG | + | chr6_4:23249593-23249612 | Msa0982940:CDS | 55.0% |
| GGTGGAGTTGTCGAGGAGTC+AGG | + | chr6_4:23246204-23246223 | Msa0982940:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr6_4:23247900-23247919 | None:intergenic | 60.0% | |
| TATTGCCGTGGAGGCAGCTG+CGG | + | chr6_4:23248349-23248368 | Msa0982940:CDS | 60.0% | |
| TCTATCCGCAGCTGCCTCCA+CGG | - | chr6_4:23248357-23248376 | None:intergenic | 60.0% | |
| GCAGCTGCGGATAGATACCC+TGG | + | chr6_4:23248362-23248381 | Msa0982940:CDS | 60.0% | |
| ACGAGCGACGGCTTTACCGG+CGG | - | chr6_4:23245929-23245948 | None:intergenic | 65.0% | |
| CCTTGGGACCGAGGGAGGTA+CGG | - | chr6_4:23245957-23245976 | None:intergenic | 65.0% | |
| CGTACCTCCCTCGGTCCCAA+GGG | + | chr6_4:23245955-23245974 | Msa0982940:CDS | 65.0% | |
| CATACCCTTGGGACCGAGGG+AGG | - | chr6_4:23245962-23245981 | None:intergenic | 65.0% | |
| CTCCCTCGGTCCCAAGGGTA+TGG | + | chr6_4:23245960-23245979 | Msa0982940:CDS | 65.0% | |
| CCGTACCTCCCTCGGTCCCA+AGG | + | chr6_4:23245954-23245973 | Msa0982940:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 23245684 | 23250336 | 23245684 | ID=Msa0982940;Name=Msa0982940 |
| chr6_4 | mRNA | 23245684 | 23250336 | 23245684 | ID=Msa0982940-mRNA-1;Parent=Msa0982940;Name=Msa0982940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=139|1|1|1|0.88|0.8|10|341|535 |
| chr6_4 | exon | 23245684 | 23246021 | 23245684 | ID=Msa0982940-mRNA-1:exon:7245;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23246143 | 23246461 | 23246143 | ID=Msa0982940-mRNA-1:exon:7246;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23246596 | 23246944 | 23246596 | ID=Msa0982940-mRNA-1:exon:7247;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23247154 | 23247286 | 23247154 | ID=Msa0982940-mRNA-1:exon:7248;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23247420 | 23247472 | 23247420 | ID=Msa0982940-mRNA-1:exon:7249;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23247654 | 23247756 | 23247654 | ID=Msa0982940-mRNA-1:exon:7250;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23248228 | 23248394 | 23248228 | ID=Msa0982940-mRNA-1:exon:7251;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23249561 | 23249674 | 23249561 | ID=Msa0982940-mRNA-1:exon:7252;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23249805 | 23250199 | 23249805 | ID=Msa0982940-mRNA-1:exon:7253;Parent=Msa0982940-mRNA-1 |
| chr6_4 | exon | 23250220 | 23250336 | 23250220 | ID=Msa0982940-mRNA-1:exon:7254;Parent=Msa0982940-mRNA-1 |
| chr6_4 | five_prime_UTR | 23245684 | 23245822 | 23245684 | ID=Msa0982940-mRNA-1:five_prime_utr;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23245823 | 23246021 | 23245823 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23246143 | 23246461 | 23246143 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23246596 | 23246944 | 23246596 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23247154 | 23247286 | 23247154 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23247420 | 23247472 | 23247420 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23247654 | 23247756 | 23247654 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23248228 | 23248394 | 23248228 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23249561 | 23249674 | 23249561 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | CDS | 23249805 | 23249975 | 23249805 | ID=Msa0982940-mRNA-1:cds;Parent=Msa0982940-mRNA-1 |
| chr6_4 | three_prime_UTR | 23249976 | 23250199 | 23249976 | ID=Msa0982940-mRNA-1:three_prime_utr;Parent=Msa0982940-mRNA-1 |
| chr6_4 | three_prime_UTR | 23250220 | 23250336 | 23250220 | ID=Msa0982940-mRNA-1:three_prime_utr;Parent=Msa0982940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
