Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070510 | XP_024625141.1 | 86.312 | 263 | 30 | 2 | 1 | 258 | 8 | 269 | 1.05e-148 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070510 | sp|P52914|NTPA_PEA | 60.769 | 260 | 95 | 3 | 14 | 266 | 195 | 454 | 4.47e-100 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070510 | M1VNS8 | 87.072 | 263 | 28 | 2 | 11 | 267 | 192 | 454 | 1.99e-148 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044250 | Msa1070510 | 0.802846 | 4.621445e-49 | -8.615850e-47 |
| Msa0044320 | Msa1070510 | 0.811344 | 7.337801e-51 | -8.615850e-47 |
| Msa0047230 | Msa1070510 | 0.807510 | 4.880067e-50 | -8.615850e-47 |
| Msa0056160 | Msa1070510 | 0.815195 | 1.047168e-51 | -8.615850e-47 |
| Msa0072710 | Msa1070510 | 0.827358 | 1.634889e-54 | -8.615850e-47 |
| Msa0114960 | Msa1070510 | 0.814394 | 1.575456e-51 | -8.615850e-47 |
| Msa0607440 | Msa1070510 | 0.808260 | 3.379608e-50 | -8.615850e-47 |
| Msa0615430 | Msa1070510 | 0.822468 | 2.331079e-53 | -8.615850e-47 |
| Msa0618260 | Msa1070510 | 0.825476 | 4.590489e-54 | -8.615850e-47 |
| Msa0639880 | Msa1070510 | 0.811972 | 5.358242e-51 | -8.615850e-47 |
| Msa0645780 | Msa1070510 | 0.819125 | 1.368714e-52 | -8.615850e-47 |
| Msa0654880 | Msa1070510 | 0.833431 | 5.354067e-56 | -8.615850e-47 |
| Msa0657820 | Msa1070510 | 0.827562 | 1.460673e-54 | -8.615850e-47 |
| Msa0667710 | Msa1070510 | 0.803276 | 3.766783e-49 | -8.615850e-47 |
| Msa0677590 | Msa1070510 | 0.810199 | 1.298207e-50 | -8.615850e-47 |
| Msa0698480 | Msa1070510 | 0.829360 | 5.376552e-55 | -8.615850e-47 |
| Msa0698650 | Msa1070510 | 0.825720 | 4.019038e-54 | -8.615850e-47 |
| Msa0726000 | Msa1070510 | 0.820142 | 8.019644e-53 | -8.615850e-47 |
| Msa0766030 | Msa1070510 | 0.813480 | 2.505392e-51 | -8.615850e-47 |
| Msa0771940 | Msa1070510 | 0.813082 | 3.064432e-51 | -8.615850e-47 |
| Msa0829430 | Msa1070510 | 0.806032 | 1.001508e-49 | -8.615850e-47 |
| Msa0841980 | Msa1070510 | 0.807381 | 5.196358e-50 | -8.615850e-47 |
| Msa0842050 | Msa1070510 | 0.825457 | 4.640230e-54 | -8.615850e-47 |
| Msa0123900 | Msa1070510 | 0.806134 | 9.533897e-50 | -8.615850e-47 |
| Msa0143490 | Msa1070510 | 0.800341 | 1.507943e-48 | -8.615850e-47 |
| Msa0164630 | Msa1070510 | 0.825678 | 4.111262e-54 | -8.615850e-47 |
| Msa0206600 | Msa1070510 | 0.811575 | 6.538137e-51 | -8.615850e-47 |
| Msa0210870 | Msa1070510 | 0.838638 | 2.553135e-57 | -8.615850e-47 |
| Msa0217470 | Msa1070510 | 0.805688 | 1.183018e-49 | -8.615850e-47 |
| Msa0367310 | Msa1070510 | 0.826415 | 2.746570e-54 | -8.615850e-47 |
| Msa0371640 | Msa1070510 | 0.804623 | 1.976129e-49 | -8.615850e-47 |
| Msa0381990 | Msa1070510 | 0.812394 | 4.333521e-51 | -8.615850e-47 |
| Msa0390840 | Msa1070510 | 0.839309 | 1.711772e-57 | -8.615850e-47 |
| Msa0402640 | Msa1070510 | 0.800048 | 1.730404e-48 | -8.615850e-47 |
| Msa0409000 | Msa1070510 | 0.818757 | 1.658957e-52 | -8.615850e-47 |
| Msa0420100 | Msa1070510 | 0.800026 | 1.748241e-48 | -8.615850e-47 |
| Msa0431310 | Msa1070510 | 0.804834 | 1.786107e-49 | -8.615850e-47 |
| Msa0459920 | Msa1070510 | 0.803384 | 3.577379e-49 | -8.615850e-47 |
| Msa0466070 | Msa1070510 | 0.810154 | 1.327602e-50 | -8.615850e-47 |
| Msa0470650 | Msa1070510 | 0.804481 | 2.116447e-49 | -8.615850e-47 |
| Msa0475740 | Msa1070510 | 0.811242 | 7.719959e-51 | -8.615850e-47 |
| Msa0476490 | Msa1070510 | 0.807018 | 6.202939e-50 | -8.615850e-47 |
| Msa0985430 | Msa1070510 | 0.802726 | 4.893728e-49 | -8.615850e-47 |
| Msa1014350 | Msa1070510 | 0.812495 | 4.118975e-51 | -8.615850e-47 |
| Msa1014530 | Msa1070510 | 0.809793 | 1.587034e-50 | -8.615850e-47 |
| Msa1028210 | Msa1070510 | 0.807293 | 5.424705e-50 | -8.615850e-47 |
| Msa1031420 | Msa1070510 | 0.827639 | 1.399838e-54 | -8.615850e-47 |
| Msa1031430 | Msa1070510 | 0.960924 | 4.137966e-119 | -8.615850e-47 |
| Msa1036350 | Msa1070510 | 0.812992 | 3.207480e-51 | -8.615850e-47 |
| Msa1055490 | Msa1070510 | 0.801866 | 7.356636e-49 | -8.615850e-47 |
| Msa1061130 | Msa1070510 | 0.816431 | 5.550061e-52 | -8.615850e-47 |
| Msa1070510 | Msa1093390 | 0.802426 | 5.641931e-49 | -8.615850e-47 |
| Msa1070510 | Msa1096280 | 0.832101 | 1.145160e-55 | -8.615850e-47 |
| Msa1070510 | Msa1106320 | 0.805275 | 1.444221e-49 | -8.615850e-47 |
| Msa1070510 | Msa1106830 | 0.813619 | 2.335128e-51 | -8.615850e-47 |
| Msa1070510 | Msa1113210 | 0.833151 | 6.289313e-56 | -8.615850e-47 |
| Msa1070510 | Msa1138450 | 0.813614 | 2.340849e-51 | -8.615850e-47 |
| Msa1070510 | Msa1140940 | 0.817218 | 3.695563e-52 | -8.615850e-47 |
| Msa1070510 | Msa1148970 | 0.811161 | 8.040440e-51 | -8.615850e-47 |
| Msa1070510 | Msa1154130 | 0.806877 | 6.644844e-50 | -8.615850e-47 |
| Msa1070510 | Msa1161160 | 0.812612 | 3.884438e-51 | -8.615850e-47 |
| Msa1070510 | Msa1179130 | 0.802808 | 4.705722e-49 | -8.615850e-47 |
| Msa1070510 | Msa1182480 | 0.809485 | 1.848272e-50 | -8.615850e-47 |
| Msa1070510 | Msa1182830 | 0.805908 | 1.063396e-49 | -8.615850e-47 |
| Msa1070510 | Msa1196990 | 0.841289 | 5.200396e-58 | -8.615850e-47 |
| Msa1070510 | Msa1211280 | 0.802106 | 6.566204e-49 | -8.615850e-47 |
| Msa1070510 | Msa1233770 | 0.830100 | 3.552505e-55 | -8.615850e-47 |
| Msa1070510 | Msa1235880 | 0.809025 | 2.319656e-50 | -8.615850e-47 |
| Msa1070510 | Msa1276080 | 0.823155 | 1.612939e-53 | -8.615850e-47 |
| Msa1070510 | Msa1281390 | 0.801833 | 7.472759e-49 | -8.615850e-47 |
| Msa1070510 | Msa1314180 | 0.803342 | 3.649759e-49 | -8.615850e-47 |
| Msa1070510 | Msa1338550 | 0.801423 | 9.066358e-49 | -8.615850e-47 |
| Msa1070510 | Msa1353270 | 0.810500 | 1.117551e-50 | -8.615850e-47 |
| Msa1070510 | Msa1373910 | 0.800199 | 1.611736e-48 | -8.615850e-47 |
| Msa1070510 | Msa1373920 | 0.804402 | 2.197368e-49 | -8.615850e-47 |
| Msa1070510 | Msa1376230 | 0.814710 | 1.340886e-51 | -8.615850e-47 |
| Msa1070510 | Msa1386020 | 0.831644 | 1.484919e-55 | -8.615850e-47 |
| Msa1070510 | Msa1391600 | 0.823009 | 1.744298e-53 | -8.615850e-47 |
| Msa1070510 | Msa1397540 | 0.815614 | 8.446266e-52 | -8.615850e-47 |
| Msa1070510 | Msa1413880 | 0.804426 | 2.172913e-49 | -8.615850e-47 |
| Msa1070510 | Msa1420630 | 0.807254 | 5.529493e-50 | -8.615850e-47 |
| Msa1070510 | Msa1425110 | 0.812750 | 3.622335e-51 | -8.615850e-47 |
| Msa1070510 | Msa1425570 | 0.806493 | 8.010270e-50 | -8.615850e-47 |
| Msa1070510 | Msa1466170 | 0.804841 | 1.779621e-49 | -8.615850e-47 |
| Msa0251140 | Msa1070510 | 0.810411 | 1.168383e-50 | -8.615850e-47 |
| Msa0272420 | Msa1070510 | 0.829060 | 6.357237e-55 | -8.615850e-47 |
| Msa0274870 | Msa1070510 | 0.804086 | 2.557603e-49 | -8.615850e-47 |
| Msa0274890 | Msa1070510 | 0.801783 | 7.650189e-49 | -8.615850e-47 |
| Msa0296640 | Msa1070510 | 0.819742 | 9.896981e-53 | -8.615850e-47 |
| Msa0304020 | Msa1070510 | 0.830274 | 3.220325e-55 | -8.615850e-47 |
| Msa0305860 | Msa1070510 | 0.807185 | 5.718716e-50 | -8.615850e-47 |
| Msa0312570 | Msa1070510 | 0.820185 | 7.839983e-53 | -8.615850e-47 |
| Msa0340530 | Msa1070510 | 0.813318 | 2.720338e-51 | -8.615850e-47 |
| Msa0361500 | Msa1070510 | 0.840432 | 8.728389e-58 | -8.615850e-47 |
| Msa0511930 | Msa1070510 | 0.803469 | 3.434032e-49 | -8.615850e-47 |
| Msa0530930 | Msa1070510 | 0.810431 | 1.156699e-50 | -8.615850e-47 |
| Msa0532910 | Msa1070510 | 0.807745 | 4.350336e-50 | -8.615850e-47 |
| Msa0539900 | Msa1070510 | 0.828578 | 8.316432e-55 | -8.615850e-47 |
| Msa0561420 | Msa1070510 | 0.827812 | 1.272126e-54 | -8.615850e-47 |
| Msa0599250 | Msa1070510 | 0.802264 | 6.093644e-49 | -8.615850e-47 |
| Msa0846180 | Msa1070510 | 0.808416 | 3.130031e-50 | -8.615850e-47 |
| Msa0853920 | Msa1070510 | 0.814642 | 1.388402e-51 | -8.615850e-47 |
| Msa0871470 | Msa1070510 | 0.819066 | 1.411807e-52 | -8.615850e-47 |
| Msa0884300 | Msa1070510 | 0.812374 | 4.377944e-51 | -8.615850e-47 |
| Msa0904630 | Msa1070510 | 0.812753 | 3.618306e-51 | -8.615850e-47 |
| Msa0906150 | Msa1070510 | 0.801794 | 7.612467e-49 | -8.615850e-47 |
| Msa0911910 | Msa1070510 | 0.814372 | 1.593051e-51 | -8.615850e-47 |
| Msa0936650 | Msa1070510 | 0.821154 | 4.694920e-53 | -8.615850e-47 |
| Msa0970050 | Msa1070510 | 0.807283 | 5.451439e-50 | -8.615850e-47 |
| Msa0974570 | Msa1070510 | 0.800525 | 1.383550e-48 | -8.615850e-47 |
| Msa0975280 | Msa1070510 | 0.820714 | 5.927929e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070510 | MtrunA17_Chr7g0252921 | 86.692 | 263 | 29 | 2 | 11 | 267 | 192 | 454 | 9.08e-152 | 431 |
| Msa1070510 | MtrunA17_Chr7g0252891 | 63.740 | 262 | 87 | 4 | 14 | 267 | 217 | 478 | 6.96e-107 | 318 |
| Msa1070510 | MtrunA17_Chr7g0252881 | 63.462 | 260 | 88 | 3 | 14 | 266 | 196 | 455 | 2.78e-106 | 315 |
| Msa1070510 | MtrunA17_Chr4g0015031 | 60.949 | 274 | 94 | 4 | 6 | 266 | 192 | 465 | 8.46e-106 | 315 |
| Msa1070510 | MtrunA17_Chr7g0252911 | 57.143 | 273 | 109 | 3 | 3 | 267 | 183 | 455 | 4.68e-105 | 312 |
| Msa1070510 | MtrunA17_Chr7g0252941 | 86.782 | 174 | 18 | 1 | 60 | 228 | 6 | 179 | 7.96e-92 | 269 |
| Msa1070510 | MtrunA17_Chr6g0461671 | 54.682 | 267 | 111 | 5 | 1 | 257 | 216 | 482 | 1.63e-84 | 261 |
| Msa1070510 | MtrunA17_Chr7g0252861 | 55.020 | 249 | 103 | 4 | 14 | 255 | 219 | 465 | 1.27e-80 | 250 |
| Msa1070510 | MtrunA17_Chr7g0252901 | 46.296 | 108 | 50 | 1 | 160 | 267 | 1 | 100 | 6.34e-29 | 105 |
| Msa1070510 | MtrunA17_Chr7g0252931 | 71.875 | 64 | 17 | 1 | 1 | 64 | 8 | 70 | 4.18e-25 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070510 | AT5G18280.1 | 49.242 | 264 | 125 | 4 | 1 | 255 | 207 | 470 | 1.35e-77 | 243 |
| Msa1070510 | AT3G04080.1 | 49.808 | 261 | 122 | 4 | 4 | 255 | 209 | 469 | 1.05e-74 | 235 |
Find 71 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCTACGATACGAATTT+TGG | 0.153561 | 7_2:-66779936 | None:intergenic |
| GTACATGAAACGATCAAATT+TGG | 0.196830 | 7_2:-66781405 | None:intergenic |
| CTCTTAGCATTTCTTATGCT+TGG | 0.236240 | 7_2:+66778314 | None:intergenic |
| CAGTATACATTGTTTGTTGA+TGG | 0.280650 | 7_2:+66780067 | Msa1070510:CDS |
| TCTTAGCATTTCTTATGCTT+GGG | 0.285264 | 7_2:+66778315 | None:intergenic |
| GGCATATTACAAGCACTAAT+AGG | 0.286453 | 7_2:-66781615 | None:intergenic |
| CATTGATTTCGTTGCATATA+TGG | 0.296216 | 7_2:+66781690 | Msa1070510:three_prime_UTR |
| CACTTTGCATTCATCAAAGT+TGG | 0.320663 | 7_2:-66779284 | None:intergenic |
| TGGAACGGTGGAGGAGGAAG+TGG | 0.352169 | 7_2:+66779373 | Msa1070510:CDS |
| GGACAGCTGGGAGGAACTTT+GGG | 0.369162 | 7_2:+66778783 | Msa1070510:intron |
| CCTTGTGAGAAATGTACTTT+TGG | 0.372554 | 7_2:+66779343 | Msa1070510:CDS |
| TGGACAGCTGGGAGGAACTT+TGG | 0.375248 | 7_2:+66778782 | Msa1070510:intron |
| AAAGGCACATATACATATTC+AGG | 0.381400 | 7_2:+66779226 | Msa1070510:intron |
| GGAACTTTGGGTGACGCATT+AGG | 0.381525 | 7_2:+66778795 | Msa1070510:CDS |
| ACATTGTTTGTTGATGGATT+TGG | 0.386236 | 7_2:+66780073 | Msa1070510:CDS |
| TCTTTCAGTTATTTGCGCTT+TGG | 0.386501 | 7_2:+66779025 | Msa1070510:intron |
| CGTATCGTAGATCTGAAAAC+TGG | 0.387189 | 7_2:+66779944 | Msa1070510:CDS |
| ATATTCAGGAGAGGAGTATA+AGG | 0.395985 | 7_2:+66779240 | Msa1070510:CDS |
| TACATGAAACGATCAAATTT+GGG | 0.400032 | 7_2:-66781404 | None:intergenic |
| TCAAAGTTGGGGCCAGAAGC+AGG | 0.404729 | 7_2:-66779271 | None:intergenic |
| GCATATTACAAGCACTAATA+GGG | 0.410279 | 7_2:-66781614 | None:intergenic |
| CACATATCCACTTATTTATG+AGG | 0.413364 | 7_2:+66780009 | Msa1070510:CDS |
| ACTTTGCATTCATCAAAGTT+GGG | 0.421434 | 7_2:-66779283 | None:intergenic |
| CTTGCTCTCTTGAATGTACA+TGG | 0.427223 | 7_2:-66778845 | None:intergenic |
| ATAAGATCCAAGCATGCATA+TGG | 0.431391 | 7_2:-66780040 | None:intergenic |
| TAATCTCTTGCAATGGGTCT+AGG | 0.432068 | 7_2:-66781295 | None:intergenic |
| CCAGCTAAAATGCAAGGATT+AGG | 0.433680 | 7_2:-66779094 | None:intergenic |
| AATAAGTGGATATGTGGCTT+TGG | 0.441902 | 7_2:-66780002 | None:intergenic |
| CATCAACAAACAATGTATAC+TGG | 0.442196 | 7_2:-66780066 | None:intergenic |
| TATCTTAGGATATTGCTTGT+TGG | 0.453391 | 7_2:-66781641 | None:intergenic |
| TCCTCTCCCTCAGGTACTTG+TGG | 0.454926 | 7_2:-66778879 | None:intergenic |
| CCACGGTAATCTCTTGCAAT+GGG | 0.459035 | 7_2:-66781301 | None:intergenic |
| AAGCGTCAAGAATTAAACTT+AGG | 0.463061 | 7_2:+66781438 | Msa1070510:exon |
| GGGATATGGAACGGTGGAGG+AGG | 0.473543 | 7_2:+66779367 | Msa1070510:CDS |
| AATATTACCTCTATGTTCAC+AGG | 0.473842 | 7_2:+66778937 | Msa1070510:CDS |
| GCACAACATATTACAACCAT+TGG | 0.481775 | 7_2:-66781592 | None:intergenic |
| ATGTATGGATCCTCTCCCTC+AGG | 0.486133 | 7_2:-66778888 | None:intergenic |
| GGTGGGATATGGAACGGTGG+AGG | 0.488863 | 7_2:+66779364 | Msa1070510:CDS |
| CTTAGCATTTCTTATGCTTG+GGG | 0.491596 | 7_2:+66778316 | None:intergenic |
| TAATCTTCCATATGCATGCT+TGG | 0.498926 | 7_2:+66780033 | Msa1070510:CDS |
| CTCATAAATAAGTGGATATG+TGG | 0.500526 | 7_2:-66780008 | None:intergenic |
| TAGGATATTGCTTGTTGGCA+CGG | 0.500703 | 7_2:-66781636 | None:intergenic |
| GCCACGGTAATCTCTTGCAA+TGG | 0.500788 | 7_2:-66781302 | None:intergenic |
| ACGCATTAGGTGATGTTGGA+GGG | 0.515965 | 7_2:+66778808 | Msa1070510:CDS |
| CAAAGTTGGGGCCAGAAGCA+GGG | 0.521616 | 7_2:-66779270 | None:intergenic |
| GACGCATTAGGTGATGTTGG+AGG | 0.524394 | 7_2:+66778807 | Msa1070510:CDS |
| GTGGATGCAGCATGGCCTCT+AGG | 0.524509 | 7_2:+66781353 | Msa1070510:CDS |
| CTTTGCATTCATCAAAGTTG+GGG | 0.530483 | 7_2:-66779282 | None:intergenic |
| CGCATTAGGTGATGTTGGAG+GGG | 0.533947 | 7_2:+66778809 | Msa1070510:CDS |
| TCCACAAGTACCTGAGGGAG+AGG | 0.539184 | 7_2:+66778878 | Msa1070510:CDS |
| GGTGACGCATTAGGTGATGT+TGG | 0.560563 | 7_2:+66778804 | Msa1070510:CDS |
| AGATTATCCTCATAAATAAG+TGG | 0.574466 | 7_2:-66780016 | None:intergenic |
| AATAAAACCTGTGAACATAG+AGG | 0.575004 | 7_2:-66778944 | None:intergenic |
| AAACGATCAAATTTGGGCAA+TGG | 0.575531 | 7_2:-66781398 | None:intergenic |
| ATATTCAATTTGATTTGCCA+CGG | 0.578091 | 7_2:-66781318 | None:intergenic |
| GGAACGGTGGAGGAGGAAGT+GGG | 0.591214 | 7_2:+66779374 | Msa1070510:CDS |
| GCATTAGGTGATGTTGGAGG+GGG | 0.604173 | 7_2:+66778810 | Msa1070510:CDS |
| AAAGTTGGGGCCAGAAGCAG+GGG | 0.606784 | 7_2:-66779269 | None:intergenic |
| TGATAGCCAGCTAAAATGCA+AGG | 0.615009 | 7_2:-66779100 | None:intergenic |
| TGAATATCAAGATGCAGTTG+TGG | 0.629356 | 7_2:+66781334 | Msa1070510:CDS |
| AGTTTGTAAAACAAAATACA+AGG | 0.630812 | 7_2:+66779976 | Msa1070510:CDS |
| CACATATACATATTCAGGAG+AGG | 0.631559 | 7_2:+66779231 | Msa1070510:CDS |
| GCTTCTGTTGCATTGCCTAG+AGG | 0.632703 | 7_2:-66781368 | None:intergenic |
| AAGAGCTCCACAAGTACCTG+AGG | 0.640256 | 7_2:+66778872 | Msa1070510:CDS |
| CCAAAAGTACATTTCTCACA+AGG | 0.649040 | 7_2:-66779343 | None:intergenic |
| TGTGTATAATATGTATCCAA+TGG | 0.653679 | 7_2:+66781576 | Msa1070510:three_prime_UTR |
| AGAGCTCCACAAGTACCTGA+GGG | 0.666757 | 7_2:+66778873 | Msa1070510:CDS |
| ATGCAGTTGTGGATGCAGCA+TGG | 0.702608 | 7_2:+66781345 | Msa1070510:CDS |
| AATGCTATTGGACAGCTGGG+AGG | 0.726531 | 7_2:+66778774 | Msa1070510:intron |
| TTTGGTGGGATATGGAACGG+TGG | 0.747214 | 7_2:+66779361 | Msa1070510:CDS |
| CCCATTGCAAGAGATTACCG+TGG | 0.756212 | 7_2:+66781301 | Msa1070510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACGAAATTATTATTATTTT+TGG | + | chr7_2:66778632-66778651 | Msa1070510:intron | 10.0% |
| !!! | TTGTTTTATAATTTGAAAAA+TGG | - | chr7_2:66779517-66779536 | None:intergenic | 10.0% |
| !! | TGTAAAAAAAAAATTATGTT+GGG | - | chr7_2:66780801-66780820 | None:intergenic | 10.0% |
| !! | ATGTAAAAAAAAAATTATGT+TGG | - | chr7_2:66780802-66780821 | None:intergenic | 10.0% |
| !!! | TTTTCATTTTATTTTATCTT+AGG | - | chr7_2:66781658-66781677 | None:intergenic | 10.0% |
| !! | ATAAAAAAGATTGTACTTAA+AGG | + | chr7_2:66778909-66778928 | Msa1070510:CDS | 15.0% |
| !!! | TGTTGATAAAATTAATTGTA+GGG | + | chr7_2:66779155-66779174 | Msa1070510:intron | 15.0% |
| !!! | ATCTAAAATCATTATATTCT+AGG | + | chr7_2:66779855-66779874 | Msa1070510:intron | 15.0% |
| !!! | ATTGATCCTTTAAATTATTT+TGG | - | chr7_2:66780349-66780368 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr7_2:66780458-66780477 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr7_2:66780585-66780604 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr7_2:66780584-66780603 | Msa1070510:intron | 15.0% |
| !! | TGAATATAATAGAAATTACA+AGG | + | chr7_2:66780940-66780959 | Msa1070510:intron | 15.0% |
| !! | AATTTAAAAGACATTAACTT+AGG | - | chr7_2:66781242-66781261 | None:intergenic | 15.0% |
| !!! | GTCTATATTTTTTCTTTAAG+AGG | - | chr7_2:66778371-66778390 | None:intergenic | 20.0% |
| !! | AATCGATGCTTAAAAATTTA+AGG | - | chr7_2:66778402-66778421 | None:intergenic | 20.0% |
| !!! | AAATCATTATCTTTAGAAAC+AGG | + | chr7_2:66778540-66778559 | Msa1070510:intron | 20.0% |
| !!! | AATCATTATCTTTAGAAACA+GGG | + | chr7_2:66778541-66778560 | Msa1070510:intron | 20.0% |
| !!! | AGTACAATCTTTTTTATGTA+TGG | - | chr7_2:66778906-66778925 | None:intergenic | 20.0% |
| !!! | GGTTTTATTCTTAATATTCT+TGG | + | chr7_2:66778958-66778977 | Msa1070510:intron | 20.0% |
| !!! | CTGTTGATAAAATTAATTGT+AGG | + | chr7_2:66779154-66779173 | Msa1070510:intron | 20.0% |
| !!! | TTTTTTAACTAGATCTTGAT+CGG | + | chr7_2:66779555-66779574 | Msa1070510:intron | 20.0% |
| !!! | AAGATAAATGTACTTTTTCT+AGG | - | chr7_2:66779798-66779817 | None:intergenic | 20.0% |
| !!! | AAAAAGTACATTTATCTTTC+TGG | + | chr7_2:66779800-66779819 | Msa1070510:intron | 20.0% |
| !! | AGTTTGTAAAACAAAATACA+AGG | + | chr7_2:66779976-66779995 | Msa1070510:CDS | 20.0% |
| !!! | AATTGAAAGCGTTTATATTT+GGG | - | chr7_2:66780184-66780203 | None:intergenic | 20.0% |
| !!! | AAATTGAAAGCGTTTATATT+TGG | - | chr7_2:66780185-66780204 | None:intergenic | 20.0% |
| !! | GTATGACCAAAATAATTTAA+AGG | + | chr7_2:66780340-66780359 | Msa1070510:intron | 20.0% |
| !!! | ATTTTAGGTTAAATTACATC+AGG | - | chr7_2:66780400-66780419 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr7_2:66780498-66780517 | None:intergenic | 20.0% |
| !!! | TCGTTTTAAAAGTAATACTT+TGG | - | chr7_2:66780561-66780580 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr7_2:66780618-66780637 | None:intergenic | 20.0% |
| !!! | CCTAAAAAGAAGAATTTTTA+AGG | - | chr7_2:66780875-66780894 | None:intergenic | 20.0% |
| !!! | CCTTAAAAATTCTTCTTTTT+AGG | + | chr7_2:66780872-66780891 | Msa1070510:intron | 20.0% |
| !! | AAATCATATTGTAACAAGTT+AGG | - | chr7_2:66781110-66781129 | None:intergenic | 20.0% |
| !! | CACACAACTTATTAAATAAA+TGG | + | chr7_2:66781514-66781533 | Msa1070510:intron | 20.0% |
| !! | CAACTTATTAAATAAATGGA+TGG | + | chr7_2:66781518-66781537 | Msa1070510:intron | 20.0% |
| !!! | GAAATTTTGAAAGTCACTAA+TGG | + | chr7_2:66779067-66779086 | Msa1070510:CDS | 25.0% |
| ! | AATGGCTTATCATCAATTTA+AGG | - | chr7_2:66779195-66779214 | None:intergenic | 25.0% |
| !!! | AGCCATTTTTTATTCTTCAA+AGG | + | chr7_2:66779208-66779227 | Msa1070510:intron | 25.0% |
| !! | TGCCTTTGAAGAATAAAAAA+TGG | - | chr7_2:66779213-66779232 | None:intergenic | 25.0% |
| ! | ATGCAAAGTGATAATTCTTT+AGG | + | chr7_2:66779297-66779316 | Msa1070510:intron | 25.0% |
| !! | ATTTTATTACGTGCTTACAA+GGG | + | chr7_2:66779423-66779442 | Msa1070510:CDS | 25.0% |
| !! | AATGATTTTAGATTTTTGCG+AGG | - | chr7_2:66779848-66779867 | None:intergenic | 25.0% |
| !!! | TATGTTATTTCTACATGTGT+AGG | + | chr7_2:66779883-66779902 | Msa1070510:intron | 25.0% |
| ! | AGATTATCCTCATAAATAAG+TGG | - | chr7_2:66780019-66780038 | None:intergenic | 25.0% |
| ! | ATGTGACCAAAATAACTTAA+AGG | + | chr7_2:66780280-66780299 | Msa1070510:intron | 25.0% |
| !!! | ATTGGTCCTTTAAGTTATTT+TGG | - | chr7_2:66780289-66780308 | None:intergenic | 25.0% |
| ! | AAACGAACCAATAGTTAATA+AGG | + | chr7_2:66780575-66780594 | Msa1070510:intron | 25.0% |
| !! | CAAGTAAAAAGCATATAAGA+AGG | - | chr7_2:66780716-66780735 | None:intergenic | 25.0% |
| !!! | TGTGTGGTTATTTATTTTCA+TGG | - | chr7_2:66780762-66780781 | None:intergenic | 25.0% |
| !!! | CTTGATTTCTAAAATATGTG+TGG | - | chr7_2:66780778-66780797 | None:intergenic | 25.0% |
| ! | CATATGCTAATTACAAGAAA+TGG | + | chr7_2:66780819-66780838 | Msa1070510:intron | 25.0% |
| ! | TGCTTCAAAAAAATTATTGC+AGG | + | chr7_2:66780967-66780986 | Msa1070510:intron | 25.0% |
| ! | GCTTCAAAAAAATTATTGCA+GGG | + | chr7_2:66780968-66780987 | Msa1070510:intron | 25.0% |
| ! | CTTCAAAAAAATTATTGCAG+GGG | + | chr7_2:66780969-66780988 | Msa1070510:intron | 25.0% |
| !!! | TCATTAAGAGTGTTGAAATT+CGG | - | chr7_2:66781036-66781055 | None:intergenic | 25.0% |
| ! | ATGAAAGCTAACTTAAAGTT+TGG | + | chr7_2:66781052-66781071 | Msa1070510:intron | 25.0% |
| ! | TCAAAAATACGAGTATTCTT+AGG | + | chr7_2:66781213-66781232 | Msa1070510:intron | 25.0% |
| !!! | ATATTCAATTTGATTTGCCA+CGG | - | chr7_2:66781321-66781340 | None:intergenic | 25.0% |
| ! | TACATGAAACGATCAAATTT+GGG | - | chr7_2:66781407-66781426 | None:intergenic | 25.0% |
| ! | TAGCCAATAAAATAAAAGCA+CGG | + | chr7_2:66781485-66781504 | Msa1070510:intron | 25.0% |
| ! | TGTGTATAATATGTATCCAA+TGG | + | chr7_2:66781576-66781595 | Msa1070510:three_prime_UTR | 25.0% |
| CAACTACTTTATGGTACATA+AGG | - | chr7_2:66778606-66778625 | None:intergenic | 30.0% | |
| AATATTACCTCTATGTTCAC+AGG | + | chr7_2:66778937-66778956 | Msa1070510:CDS | 30.0% | |
| AATAAAACCTGTGAACATAG+AGG | - | chr7_2:66778947-66778966 | None:intergenic | 30.0% | |
| ! | AAAGGCACATATACATATTC+AGG | + | chr7_2:66779226-66779245 | Msa1070510:intron | 30.0% |
| ACTTTGCATTCATCAAAGTT+GGG | - | chr7_2:66779286-66779305 | None:intergenic | 30.0% | |
| ! | CATTTTATTACGTGCTTACA+AGG | + | chr7_2:66779422-66779441 | Msa1070510:CDS | 30.0% |
| ATTTCCAACATTCACGTATT+GGG | + | chr7_2:66779488-66779507 | Msa1070510:intron | 30.0% | |
| ATCAGATTTCATACTGTCAA+CGG | - | chr7_2:66779618-66779637 | None:intergenic | 30.0% | |
| !! | TTATTTCTACATGTGTAGGT+TGG | + | chr7_2:66779887-66779906 | Msa1070510:intron | 30.0% |
| CTCATAAATAAGTGGATATG+TGG | - | chr7_2:66780011-66780030 | None:intergenic | 30.0% | |
| CACATATCCACTTATTTATG+AGG | + | chr7_2:66780009-66780028 | Msa1070510:CDS | 30.0% | |
| CATCAACAAACAATGTATAC+TGG | - | chr7_2:66780069-66780088 | None:intergenic | 30.0% | |
| ! | CAGTATACATTGTTTGTTGA+TGG | + | chr7_2:66780067-66780086 | Msa1070510:CDS | 30.0% |
| !! | ACATTGTTTGTTGATGGATT+TGG | + | chr7_2:66780073-66780092 | Msa1070510:CDS | 30.0% |
| ! | GTTTGAAGTTTGTAACAGAT+TGG | - | chr7_2:66780307-66780326 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr7_2:66780666-66780685 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr7_2:66780667-66780686 | Msa1070510:intron | 30.0% |
| ACAAGAAATGGTGTATTTGT+TGG | + | chr7_2:66780831-66780850 | Msa1070510:intron | 30.0% | |
| ACAATGACTAAGAACTTAGA+AGG | + | chr7_2:66781081-66781100 | Msa1070510:intron | 30.0% | |
| GTACATGAAACGATCAAATT+TGG | - | chr7_2:66781408-66781427 | None:intergenic | 30.0% | |
| AAGCGTCAAGAATTAAACTT+AGG | + | chr7_2:66781438-66781457 | Msa1070510:exon | 30.0% | |
| GCATATTACAAGCACTAATA+GGG | - | chr7_2:66781617-66781636 | None:intergenic | 30.0% | |
| TATCTTAGGATATTGCTTGT+TGG | - | chr7_2:66781644-66781663 | None:intergenic | 30.0% | |
| !! | CATTGATTTCGTTGCATATA+TGG | + | chr7_2:66781690-66781709 | Msa1070510:three_prime_UTR | 30.0% |
| CTATATCAAAAACTGCAGTC+AGG | - | chr7_2:66778476-66778495 | None:intergenic | 35.0% | |
| AACAGATACTCATATGTGTG+TGG | + | chr7_2:66778496-66778515 | Msa1070510:intron | 35.0% | |
| TTATGGTACATAAGGCCTAA+GGG | - | chr7_2:66778598-66778617 | None:intergenic | 35.0% | |
| TTTATGGTACATAAGGCCTA+AGG | - | chr7_2:66778599-66778618 | None:intergenic | 35.0% | |
| GTACCATAAAGTAGTTGCAA+CGG | + | chr7_2:66778609-66778628 | Msa1070510:intron | 35.0% | |
| !! | TAGGAAAGCACTCTTCAAAT+TGG | - | chr7_2:66778674-66778693 | None:intergenic | 35.0% |
| TACACATATGTTGCAAGGTT+AGG | - | chr7_2:66778693-66778712 | None:intergenic | 35.0% | |
| TAACCTTGCAACATATGTGT+AGG | + | chr7_2:66778692-66778711 | Msa1070510:intron | 35.0% | |
| TCTTTCAGTTATTTGCGCTT+TGG | + | chr7_2:66779025-66779044 | Msa1070510:intron | 35.0% | |
| CACATATACATATTCAGGAG+AGG | + | chr7_2:66779231-66779250 | Msa1070510:CDS | 35.0% | |
| ! | ATATTCAGGAGAGGAGTATA+AGG | + | chr7_2:66779240-66779259 | Msa1070510:CDS | 35.0% |
| CTTTGCATTCATCAAAGTTG+GGG | - | chr7_2:66779285-66779304 | None:intergenic | 35.0% | |
| CACTTTGCATTCATCAAAGT+TGG | - | chr7_2:66779287-66779306 | None:intergenic | 35.0% | |
| ! | CCAAAAGTACATTTCTCACA+AGG | - | chr7_2:66779346-66779365 | None:intergenic | 35.0% |
| ! | CCTTGTGAGAAATGTACTTT+TGG | + | chr7_2:66779343-66779362 | Msa1070510:CDS | 35.0% |
| ! | TGTGAGAAATGTACTTTTGG+TGG | + | chr7_2:66779346-66779365 | Msa1070510:CDS | 35.0% |
| ! | GTGAGAAATGTACTTTTGGT+GGG | + | chr7_2:66779347-66779366 | Msa1070510:CDS | 35.0% |
| ! | AATGTACTTTTGGTGGGATA+TGG | + | chr7_2:66779353-66779372 | Msa1070510:CDS | 35.0% |
| GATTTCCAACATTCACGTAT+TGG | + | chr7_2:66779487-66779506 | Msa1070510:intron | 35.0% | |
| ! | ACGATACGAATTTTGGACTT+GGG | - | chr7_2:66779932-66779951 | None:intergenic | 35.0% |
| ! | TACGATACGAATTTTGGACT+TGG | - | chr7_2:66779933-66779952 | None:intergenic | 35.0% |
| ! | CAGATCTACGATACGAATTT+TGG | - | chr7_2:66779939-66779958 | None:intergenic | 35.0% |
| AATAAGTGGATATGTGGCTT+TGG | - | chr7_2:66780005-66780024 | None:intergenic | 35.0% | |
| TAATCTTCCATATGCATGCT+TGG | + | chr7_2:66780033-66780052 | Msa1070510:CDS | 35.0% | |
| ATAAGATCCAAGCATGCATA+TGG | - | chr7_2:66780043-66780062 | None:intergenic | 35.0% | |
| TGTTAACCTAAACGATGATG+TGG | + | chr7_2:66780213-66780232 | Msa1070510:intron | 35.0% | |
| GTTACAAACCTCAAACGTAA+AGG | + | chr7_2:66780371-66780390 | Msa1070510:intron | 35.0% | |
| !! | AAACGGAGGGAGTATATTTT+AGG | - | chr7_2:66780415-66780434 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr7_2:66780432-66780451 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr7_2:66780532-66780551 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr7_2:66780536-66780555 | None:intergenic | 35.0% |
| TGAATATCAAGATGCAGTTG+TGG | + | chr7_2:66781334-66781353 | Msa1070510:CDS | 35.0% | |
| AAACGATCAAATTTGGGCAA+TGG | - | chr7_2:66781401-66781420 | None:intergenic | 35.0% | |
| !!! | GTGCCGTGCTTTTATTTTAT+TGG | - | chr7_2:66781491-66781510 | None:intergenic | 35.0% |
| GCACAACATATTACAACCAT+TGG | - | chr7_2:66781595-66781614 | None:intergenic | 35.0% | |
| GGCATATTACAAGCACTAAT+AGG | - | chr7_2:66781618-66781637 | None:intergenic | 35.0% | |
| TACTCATATGTGTGTGGATG+TGG | + | chr7_2:66778502-66778521 | Msa1070510:intron | 40.0% | |
| GTGGATGTGGTTAACATGAT+TGG | + | chr7_2:66778515-66778534 | Msa1070510:intron | 40.0% | |
| TATGGTACATAAGGCCTAAG+GGG | - | chr7_2:66778597-66778616 | None:intergenic | 40.0% | |
| GTTCCGTTGCAACTACTTTA+TGG | - | chr7_2:66778615-66778634 | None:intergenic | 40.0% | |
| CTTGCTCTCTTGAATGTACA+TGG | - | chr7_2:66778848-66778867 | None:intergenic | 40.0% | |
| CCAGCTAAAATGCAAGGATT+AGG | - | chr7_2:66779097-66779116 | None:intergenic | 40.0% | |
| !! | CCTAATCCTTGCATTTTAGC+TGG | + | chr7_2:66779094-66779113 | Msa1070510:CDS | 40.0% |
| TGATAGCCAGCTAAAATGCA+AGG | - | chr7_2:66779103-66779122 | None:intergenic | 40.0% | |
| !!! | TGCATTTTAGCTGGCTATCA+TGG | + | chr7_2:66779103-66779122 | Msa1070510:CDS | 40.0% |
| ! | ACTTTTGGTGGGATATGGAA+CGG | + | chr7_2:66779358-66779377 | Msa1070510:CDS | 40.0% |
| TATGTTCCAAATGCGTAGTG+AGG | + | chr7_2:66779589-66779608 | Msa1070510:intron | 40.0% | |
| ATGTTCCAAATGCGTAGTGA+GGG | + | chr7_2:66779590-66779609 | Msa1070510:intron | 40.0% | |
| CGTATCGTAGATCTGAAAAC+TGG | + | chr7_2:66779944-66779963 | Msa1070510:CDS | 40.0% | |
| TCAGGTTTCCTTTACGTTTG+AGG | - | chr7_2:66780382-66780401 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_2:66780671-66780690 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr7_2:66780533-66780552 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr7_2:66780671-66780690 | Msa1070510:intron | 40.0% |
| GCAATCAGAAGTGAAATACG+AGG | + | chr7_2:66780916-66780935 | Msa1070510:intron | 40.0% | |
| ! | AAGCATGTATTTGTTGACGC+AGG | + | chr7_2:66781272-66781291 | Msa1070510:intron | 40.0% |
| TAATCTCTTGCAATGGGTCT+AGG | - | chr7_2:66781298-66781317 | None:intergenic | 40.0% | |
| ! | TAGGATATTGCTTGTTGGCA+CGG | - | chr7_2:66781639-66781658 | None:intergenic | 40.0% |
| ATGGTACATAAGGCCTAAGG+GGG | - | chr7_2:66778596-66778615 | None:intergenic | 45.0% | |
| TCGCCTACACATATGTTGCA+AGG | - | chr7_2:66778698-66778717 | None:intergenic | 45.0% | |
| AGCTTAAGAGCCCCAACTTT+GGG | + | chr7_2:66778738-66778757 | Msa1070510:intron | 45.0% | |
| CTGTCCAATAGCATTTCCCA+AGG | - | chr7_2:66778769-66778788 | None:intergenic | 45.0% | |
| GGAAATGCTATTGGACAGCT+GGG | + | chr7_2:66778771-66778790 | Msa1070510:intron | 45.0% | |
| ACGCATTAGGTGATGTTGGA+GGG | + | chr7_2:66778808-66778827 | Msa1070510:CDS | 45.0% | |
| TCCAACATTCACGTATTGGG+TGG | + | chr7_2:66779491-66779510 | Msa1070510:intron | 45.0% | |
| !! | ATTTTGGACTTGGGCTTGCT+TGG | - | chr7_2:66779923-66779942 | None:intergenic | 45.0% |
| CTTCTGCCACATCATCGTTT+AGG | - | chr7_2:66780222-66780241 | None:intergenic | 45.0% | |
| CTAAACGATGATGTGGCAGA+AGG | + | chr7_2:66780220-66780239 | Msa1070510:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_2:66780670-66780689 | None:intergenic | 45.0% |
| CCACGGTAATCTCTTGCAAT+GGG | - | chr7_2:66781304-66781323 | None:intergenic | 45.0% | |
| ATGGATGGCACACACAACAT+AGG | + | chr7_2:66781533-66781552 | Msa1070510:intron | 45.0% | |
| ACACCGTGAAAAACCCCCTT+AGG | + | chr7_2:66778580-66778599 | Msa1070510:intron | 50.0% | |
| ! | AGGCCTAAGGGGGTTTTTCA+CGG | - | chr7_2:66778586-66778605 | None:intergenic | 50.0% |
| GAGCTTAAGAGCCCCAACTT+TGG | + | chr7_2:66778737-66778756 | Msa1070510:intron | 50.0% | |
| GAGGCCTTGGGAAATGCTAT+TGG | + | chr7_2:66778762-66778781 | Msa1070510:intron | 50.0% | |
| GGGAAATGCTATTGGACAGC+TGG | + | chr7_2:66778770-66778789 | Msa1070510:intron | 50.0% | |
| AATGCTATTGGACAGCTGGG+AGG | + | chr7_2:66778774-66778793 | Msa1070510:intron | 50.0% | |
| GGAACTTTGGGTGACGCATT+AGG | + | chr7_2:66778795-66778814 | Msa1070510:CDS | 50.0% | |
| GGTGACGCATTAGGTGATGT+TGG | + | chr7_2:66778804-66778823 | Msa1070510:CDS | 50.0% | |
| GACGCATTAGGTGATGTTGG+AGG | + | chr7_2:66778807-66778826 | Msa1070510:CDS | 50.0% | |
| CGCATTAGGTGATGTTGGAG+GGG | + | chr7_2:66778809-66778828 | Msa1070510:CDS | 50.0% | |
| GCATTAGGTGATGTTGGAGG+GGG | + | chr7_2:66778810-66778829 | Msa1070510:CDS | 50.0% | |
| AAGAGCTCCACAAGTACCTG+AGG | + | chr7_2:66778872-66778891 | Msa1070510:CDS | 50.0% | |
| AGAGCTCCACAAGTACCTGA+GGG | + | chr7_2:66778873-66778892 | Msa1070510:CDS | 50.0% | |
| ATGTATGGATCCTCTCCCTC+AGG | - | chr7_2:66778891-66778910 | None:intergenic | 50.0% | |
| !! | AAGGCATTTTCCCCTGCTTC+TGG | + | chr7_2:66779259-66779278 | Msa1070510:CDS | 50.0% |
| TTTGGTGGGATATGGAACGG+TGG | + | chr7_2:66779361-66779380 | Msa1070510:CDS | 50.0% | |
| GCCACCCAATACGTGAATGT+TGG | - | chr7_2:66779495-66779514 | None:intergenic | 50.0% | |
| CCCATTGCAAGAGATTACCG+TGG | + | chr7_2:66781301-66781320 | Msa1070510:CDS | 50.0% | |
| GCCACGGTAATCTCTTGCAA+TGG | - | chr7_2:66781305-66781324 | None:intergenic | 50.0% | |
| ATGCAGTTGTGGATGCAGCA+TGG | + | chr7_2:66781345-66781364 | Msa1070510:CDS | 50.0% | |
| GCTTCTGTTGCATTGCCTAG+AGG | - | chr7_2:66781371-66781390 | None:intergenic | 50.0% | |
| AAGAGCCCCAACTTTGGGTG+AGG | + | chr7_2:66778743-66778762 | Msa1070510:intron | 55.0% | |
| CAAGGCCTCACCCAAAGTTG+GGG | - | chr7_2:66778751-66778770 | None:intergenic | 55.0% | |
| CCAAGGCCTCACCCAAAGTT+GGG | - | chr7_2:66778752-66778771 | None:intergenic | 55.0% | |
| CCAACTTTGGGTGAGGCCTT+GGG | + | chr7_2:66778750-66778769 | Msa1070510:intron | 55.0% | |
| TGGACAGCTGGGAGGAACTT+TGG | + | chr7_2:66778782-66778801 | Msa1070510:intron | 55.0% | |
| GGACAGCTGGGAGGAACTTT+GGG | + | chr7_2:66778783-66778802 | Msa1070510:intron | 55.0% | |
| TCCACAAGTACCTGAGGGAG+AGG | + | chr7_2:66778878-66778897 | Msa1070510:CDS | 55.0% | |
| TCCTCTCCCTCAGGTACTTG+TGG | - | chr7_2:66778882-66778901 | None:intergenic | 55.0% | |
| AAAGTTGGGGCCAGAAGCAG+GGG | - | chr7_2:66779272-66779291 | None:intergenic | 55.0% | |
| CAAAGTTGGGGCCAGAAGCA+GGG | - | chr7_2:66779273-66779292 | None:intergenic | 55.0% | |
| TCAAAGTTGGGGCCAGAAGC+AGG | - | chr7_2:66779274-66779293 | None:intergenic | 55.0% | |
| CGGTTCCCTCACTACGCATT+TGG | - | chr7_2:66779598-66779617 | None:intergenic | 55.0% | |
| CCCAACTTTGGGTGAGGCCT+TGG | + | chr7_2:66778749-66778768 | Msa1070510:intron | 60.0% | |
| CCCAAGGCCTCACCCAAAGT+TGG | - | chr7_2:66778753-66778772 | None:intergenic | 60.0% | |
| GGTGGGATATGGAACGGTGG+AGG | + | chr7_2:66779364-66779383 | Msa1070510:CDS | 60.0% | |
| GGGATATGGAACGGTGGAGG+AGG | + | chr7_2:66779367-66779386 | Msa1070510:CDS | 60.0% | |
| TGGAACGGTGGAGGAGGAAG+TGG | + | chr7_2:66779373-66779392 | Msa1070510:CDS | 60.0% | |
| GGAACGGTGGAGGAGGAAGT+GGG | + | chr7_2:66779374-66779393 | Msa1070510:CDS | 60.0% | |
| GTGGATGCAGCATGGCCTCT+AGG | + | chr7_2:66781353-66781372 | Msa1070510:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 66778329 | 66781713 | 66778329 | ID=Msa1070510;Name=Msa1070510 |
| chr7_2 | mRNA | 66778329 | 66781713 | 66778329 | ID=Msa1070510-mRNA-1;Parent=Msa1070510;Name=Msa1070510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.71|0.5|0.87|0.42|0.37|8|219|268 |
| chr7_2 | exon | 66778329 | 66778337 | 66778329 | ID=Msa1070510-mRNA-1:exon:14296;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66778789 | 66778958 | 66778789 | ID=Msa1070510-mRNA-1:exon:14297;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66779033 | 66779124 | 66779033 | ID=Msa1070510-mRNA-1:exon:14298;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66779230 | 66779303 | 66779230 | ID=Msa1070510-mRNA-1:exon:14299;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66779319 | 66779444 | 66779319 | ID=Msa1070510-mRNA-1:exon:14300;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66779905 | 66780094 | 66779905 | ID=Msa1070510-mRNA-1:exon:14301;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66781294 | 66781495 | 66781294 | ID=Msa1070510-mRNA-1:exon:14302;Parent=Msa1070510-mRNA-1 |
| chr7_2 | exon | 66781551 | 66781713 | 66781551 | ID=Msa1070510-mRNA-1:exon:14303;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66778329 | 66778337 | 66778329 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66778789 | 66778958 | 66778789 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66779033 | 66779124 | 66779033 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66779230 | 66779303 | 66779230 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66779319 | 66779444 | 66779319 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66779905 | 66780094 | 66779905 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | CDS | 66781294 | 66781439 | 66781294 | ID=Msa1070510-mRNA-1:cds;Parent=Msa1070510-mRNA-1 |
| chr7_2 | three_prime_UTR | 66781440 | 66781495 | 66781440 | ID=Msa1070510-mRNA-1:three_prime_utr;Parent=Msa1070510-mRNA-1 |
| chr7_2 | three_prime_UTR | 66781551 | 66781713 | 66781551 | ID=Msa1070510-mRNA-1:three_prime_utr;Parent=Msa1070510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
