AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1372470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1372470 MtrunA17_Chr2g0278991 80.349 1262 167 8 1 1187 35 1290 0.0 1898
Msa1372470 MtrunA17_Chr1g0154711 39.024 246 143 5 943 1184 260 502 2.49e-41 160
Msa1372470 MtrunA17_Chr5g0403781 35.458 251 156 4 938 1184 196 444 3.25e-38 149
Msa1372470 MtrunA17_Chr3g0106291 32.210 267 149 7 938 1184 52 306 5.36e-23 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1372470 AT4G33500.1 50.752 266 127 2 923 1185 456 720 1.12e-81 283
Msa1372470 AT5G66720.2 39.271 247 146 3 941 1184 163 408 9.20e-44 165
Msa1372470 AT5G66720.1 39.184 245 145 3 943 1184 168 411 2.39e-43 164
Msa1372470 AT4G16580.1 35.739 291 175 6 899 1184 175 458 9.47e-42 160
Msa1372470 AT2G30170.1 31.538 260 157 8 940 1184 42 295 2.36e-25 108
Msa1372470 AT2G30170.3 31.250 224 135 7 974 1184 1 218 5.71e-21 93.6
Msa1372470 AT2G30170.5 30.890 191 125 5 940 1125 42 230 4.55e-18 86.3
Msa1372470 AT2G30170.6 30.890 191 125 5 940 1125 7 195 8.06e-18 84.3
Msa1372470 AT2G30170.2 34.211 152 84 5 1045 1184 8 155 8.19e-14 70.9
Msa1372470 AT2G30170.7 30.323 155 103 4 974 1125 1 153 1.22e-13 71.2

Find 263 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTCATGGATTATGTTTC+TGG 0.090596 tig0019276:-171612 None:intergenic
TTTCCGATACATATAGTTAA+AGG 0.210970 tig0019276:+177799 Msa1372470:CDS
GCACCGGTATCTACTTCTTT+GGG 0.256310 tig0019276:+174737 Msa1372470:CDS
TCCAGGGTCATCTTCTGTTT+TGG 0.256931 tig0019276:+176610 Msa1372470:CDS
CAAGAAGCTTCCACTGTCTA+TGG 0.257958 tig0019276:+171679 Msa1372470:CDS
GAGAATCAACCTCAGGTTTC+AGG 0.262814 tig0019276:-178173 None:intergenic
GCCAATATCCACTTCTTTAG+AGG 0.266786 tig0019276:+174553 Msa1372470:CDS
GGCACCGGTATCTACTTCTT+TGG 0.271048 tig0019276:+174736 Msa1372470:CDS
CAGCCACAACTAGCCAGTTT+AGG 0.273827 tig0019276:-176181 None:intergenic
GAGTCTAAACAAGTTGATTA+TGG 0.279847 tig0019276:+174383 Msa1372470:CDS
GTTTGAGAAGGTGGTGGTTT+AGG 0.281424 tig0019276:-171726 None:intergenic
ATGCATTTGATTCTCCCTTT+TGG 0.282550 tig0019276:-179186 None:intergenic
GATGGTGATGTGATTGTATT+TGG 0.289321 tig0019276:+178078 Msa1372470:CDS
GTAATACTGGAGTGTATATC+AGG 0.291464 tig0019276:+176486 Msa1372470:CDS
ATCAACTTGTTTGGACTCTA+AGG 0.292328 tig0019276:-174288 None:intergenic
TGGCACCGATTCACTTGTTT+TGG 0.304893 tig0019276:-173325 None:intergenic
GTACTATAATTAGCTTGTTC+AGG 0.305511 tig0019276:-174668 None:intergenic
TGCACTATAATCAACTTGTT+TGG 0.305805 tig0019276:-174111 None:intergenic
TCTGAGTAGTGGTCCTTCTT+TGG 0.309038 tig0019276:+172860 Msa1372470:CDS
ATTAGCTTGTTCAGGTTCTA+AGG 0.316680 tig0019276:-174660 None:intergenic
CAGTATCATGTTTACCAAAC+TGG 0.324194 tig0019276:-178961 None:intergenic
ATATTATTTCTCCCCTAAAC+TGG 0.324245 tig0019276:+176168 Msa1372470:CDS
TTAGACTCTAAAGTAGATAT+TGG 0.325562 tig0019276:-174368 None:intergenic
GGGATTATTACTGTATATAA+TGG 0.326805 tig0019276:+179023 Msa1372470:three_prime_UTR
AGTGGGGTTGGAGTAGAAAA+TGG 0.328519 tig0019276:-171756 None:intergenic
AGGGAGAATCAAATGCATTA+TGG 0.342843 tig0019276:+179191 Msa1372470:three_prime_UTR
AGCCACAACTAGCCAGTTTA+GGG 0.343048 tig0019276:-176180 None:intergenic
TTAACATAAACATTAATTCA+TGG 0.351731 tig0019276:-171625 None:intergenic
TGATAGCGAAACAAATGATA+TGG 0.352841 tig0019276:+174031 Msa1372470:CDS
TGCACTGTAATCAACTTGTT+TGG 0.354242 tig0019276:-174297 None:intergenic
CAATATCAAGACTGCCAGTT+AGG 0.356638 tig0019276:-173956 None:intergenic
GGTGAAGGTGAAGAATCTTC+TGG 0.357767 tig0019276:-171781 None:intergenic
TCCCTTTGGTGATGCAGCTC+AGG 0.365043 tig0019276:+178807 Msa1372470:CDS
GGTGATGCAGCTCAGGCTTT+AGG 0.366266 tig0019276:+178814 Msa1372470:CDS
TTGTGTTTAGTTGGATGATT+TGG 0.367992 tig0019276:+174942 Msa1372470:intron
GAGTCAGAGCAAGTTGGTTA+TGG 0.373321 tig0019276:+173363 Msa1372470:CDS
GACTCTATGGTAGTGGATAC+TGG 0.375502 tig0019276:-173624 None:intergenic
ACCAACTTCTTCAGACTCTA+AGG 0.378636 tig0019276:-173730 None:intergenic
TTCTCTTCAGTTTCCAAAGA+AGG 0.378711 tig0019276:-172873 None:intergenic
ACCAACTTGTTCAGACTCTA+TGG 0.380754 tig0019276:-173637 None:intergenic
GCCTCTAAAGAAGTGGATAT+TGG 0.382317 tig0019276:-174554 None:intergenic
GACTCTAAAGAGAAGGATTC+TGG 0.383176 tig0019276:-173996 None:intergenic
AATTATGCAGGGAGTAATAC+TGG 0.387479 tig0019276:+176473 Msa1372470:intron
TGCTGCTGACTTGACTGAAT+TGG 0.391750 tig0019276:+173077 Msa1372470:CDS
TGAAGAAGGTGTTAGTGTTT+TGG 0.392220 tig0019276:+172443 Msa1372470:CDS
GACTCTAAGGTAGTGGATAC+TGG 0.398173 tig0019276:-173717 None:intergenic
ACCTGCACATACAACCAGTT+TGG 0.400048 tig0019276:+178947 Msa1372470:three_prime_UTR
GTGAAGAATCTTCTGGGAAG+TGG 0.400053 tig0019276:-171774 None:intergenic
TGATGCTGACAATATTGATT+TGG 0.400786 tig0019276:+174343 Msa1372470:CDS
TTAGGCTATGTGGGTTATGC+AGG 0.403492 tig0019276:+178832 Msa1372470:CDS
AATTCATGGATTATGTTTCT+GGG 0.405047 tig0019276:-171611 None:intergenic
GCAGGAAATAGCAGAAATAT+TGG 0.409348 tig0019276:+178741 Msa1372470:intron
GAAGTTGAATTGAGAAGTGT+AGG 0.415809 tig0019276:-171819 None:intergenic
CATGTTCTTCTTGAGGAGAA+GGG 0.416075 tig0019276:-171851 None:intergenic
CAAGCTAATTATAGTACAAC+AGG 0.420508 tig0019276:+174674 Msa1372470:CDS
GACTCTGAAGAAATTGATAC+TGG 0.422017 tig0019276:-173345 None:intergenic
TACATAGGTGGGAAGTTCAT+TGG 0.422151 tig0019276:-179000 None:intergenic
TCATGTTCTTCTTGAGGAGA+AGG 0.427379 tig0019276:-171852 None:intergenic
ATCACAGGTGTCTCACTCTC+AGG 0.431084 tig0019276:-172621 None:intergenic
ATGAGGATGATAGTAACTTA+AGG 0.431210 tig0019276:+172496 Msa1372470:CDS
AGTGAAACAGACAATCTTAC+TGG 0.433299 tig0019276:+173756 Msa1372470:CDS
CCCTCCATGCAGCTAACGTT+GGG 0.434196 tig0019276:+177704 Msa1372470:CDS
TGTGCCATTATCCACTTCCT+TGG 0.434488 tig0019276:+173899 Msa1372470:CDS
GAAACAATCCACCAGATTGA+TGG 0.435059 tig0019276:+174503 Msa1372470:CDS
TGGCATCAGCACTGCCAGTC+AGG 0.436271 tig0019276:-174235 None:intergenic
CTGTACTGACATAAGTGAAC+TGG 0.437884 tig0019276:+173413 Msa1372470:CDS
GATTCCAAGGAAGTGGATAA+TGG 0.440228 tig0019276:-173903 None:intergenic
AGAGCAGCAAACGGCGTAGC+AGG 0.440780 tig0019276:+173045 Msa1372470:CDS
GTATCCACTTCTTTAGAGTC+TGG 0.448484 tig0019276:+173105 Msa1372470:CDS
TGAAAATCCAATACTTAATA+CGG 0.448797 tig0019276:+175023 Msa1372470:CDS
ATTATCCACTTCCTTGGAAT+CGG 0.450007 tig0019276:+173905 Msa1372470:CDS
GGTTCTAAGGAAGTGGATAA+TGG 0.453069 tig0019276:-174647 None:intergenic
GTGATTGTATTTGGCACAAA+TGG 0.455025 tig0019276:+178087 Msa1372470:CDS
GTTTGCTTTGACAGAGCATC+CGG 0.455862 tig0019276:+172323 Msa1372470:intron
TTCGCTATCATTAGCTTGTA+CGG 0.457627 tig0019276:-174018 None:intergenic
CTTGATGTCATCTCTTCAAC+TGG 0.457786 tig0019276:+171879 Msa1372470:CDS
AGTGCAACAGACAACCTAAC+TGG 0.458889 tig0019276:+173942 Msa1372470:CDS
TGAGGATGATAGTAACTTAA+GGG 0.460749 tig0019276:+172497 Msa1372470:CDS
GAAGGTGGTGGTTTAGGAGA+AGG 0.461134 tig0019276:-171720 None:intergenic
TGTAACTGTTATAGTGTCAT+TGG 0.461295 tig0019276:+178870 Msa1372470:CDS
AGTGGAAGCTTCTTGAGAAT+AGG 0.463168 tig0019276:-171671 None:intergenic
GAGTCTGAAGAAGTGGATAC+TGG 0.464490 tig0019276:-173810 None:intergenic
AATGAACTTCCCACCTATGT+AGG 0.466503 tig0019276:+179002 Msa1372470:three_prime_UTR
TCTGGTACCGTATTAAGTAT+TGG 0.466981 tig0019276:-175030 None:intergenic
AGCTCAGGCTTTAGGCTATG+TGG 0.467198 tig0019276:+178822 Msa1372470:CDS
TGATGCCGACAGAAGTGAAT+TGG 0.467871 tig0019276:+173134 Msa1372470:CDS
CAGCATCAACACCATCAATC+TGG 0.469660 tig0019276:-174514 None:intergenic
TGATATTGCAAGAAGTGAAT+TGG 0.469666 tig0019276:+173971 Msa1372470:CDS
ATCTGAACTGAATGTATCTC+TGG 0.471057 tig0019276:-175048 None:intergenic
CTGAATGGAAAAGTTCCAAA+AGG 0.471825 tig0019276:+179171 Msa1372470:three_prime_UTR
TTATAGTGCAACAGACGATC+TGG 0.474010 tig0019276:+174124 Msa1372470:CDS
TTACAGTGCAACAGACAATC+TGG 0.475600 tig0019276:+174310 Msa1372470:CDS
CGATGCTGAAATGAGTGATT+TGG 0.479228 tig0019276:+173692 Msa1372470:CDS
GGAGAAGGAAGATTGGAGCA+TGG 0.479429 tig0019276:-171705 None:intergenic
AACCGGACAGGCAATCGAAC+CGG 0.480400 tig0019276:-179255 None:intergenic
TCCCCTAAACTGGCTAGTTG+TGG 0.482884 tig0019276:+176178 Msa1372470:CDS
TGATGCCACAATAAATGAAT+TGG 0.483922 tig0019276:+174250 Msa1372470:CDS
TGGTTTAGGAGAAGGAAGAT+TGG 0.484291 tig0019276:-171712 None:intergenic
AATCTTCTGGGAAGTGGGGT+TGG 0.487494 tig0019276:-171768 None:intergenic
TTGTTCCGATTCCAAGGAAG+TGG 0.487495 tig0019276:-173910 None:intergenic
GGAAGAAGGGTTTGAGAAGG+TGG 0.491344 tig0019276:-171735 None:intergenic
GAAAACACATCTGACTCTGC+TGG 0.491799 tig0019276:-172834 None:intergenic
CTTCTGATAAGAACTTCTGC+AGG 0.494468 tig0019276:-176569 None:intergenic
TTGTTCAGGTTCTAAGGAAG+TGG 0.496019 tig0019276:-174654 None:intergenic
AGTGTATATCAGGGAACTCA+TGG 0.497532 tig0019276:+176496 Msa1372470:CDS
TGATACTAATGATAGTGAAT+TGG 0.498648 tig0019276:+174157 Msa1372470:CDS
GAAACTGAAGAGAAAGAAGA+AGG 0.498971 tig0019276:+172882 Msa1372470:CDS
CTAGTTGTGGCTGATGGAGT+TGG 0.499488 tig0019276:+176191 Msa1372470:CDS
GTGAAGGTGAAGAATCTTCT+GGG 0.499605 tig0019276:-171780 None:intergenic
AGATCCACTAGAAGTCCCTT+TGG 0.500751 tig0019276:+178793 Msa1372470:CDS
TTGCACCAATTCATTTATTG+TGG 0.500992 tig0019276:-174255 None:intergenic
ACCTTAGAGTCTGAAGAAGT+TGG 0.501051 tig0019276:+173729 Msa1372470:CDS
TGATACCGAGTTAAGTGAAC+CGG 0.501272 tig0019276:+174622 Msa1372470:CDS
CGTCATCAACATTACCAGTC+AGG 0.501930 tig0019276:-174418 None:intergenic
ACCGCTGAAACACATTCTCC+AGG 0.502198 tig0019276:+176593 Msa1372470:CDS
AACTGGCTAGTTGTGGCTGA+TGG 0.503157 tig0019276:+176185 Msa1372470:CDS
TTCTTCAGACTCTAAGGTAG+TGG 0.505929 tig0019276:-173724 None:intergenic
AGTTCTTCATGTTCTTCTTG+AGG 0.507019 tig0019276:-171858 None:intergenic
TTTGGTTCCATCCTCAGACT+TGG 0.508422 tig0019276:+174960 Msa1372470:CDS
CGGTATCAACAACGGCAGTC+AGG 0.509782 tig0019276:-174607 None:intergenic
AGCAGAAATATTGGCGACGA+CGG 0.510585 tig0019276:+178750 Msa1372470:CDS
TTGTTCAGACTCTGAAGAAG+TGG 0.512425 tig0019276:-173259 None:intergenic
GTTGGTCAGTGGTCACTTGA+AGG 0.512818 tig0019276:+176209 Msa1372470:CDS
TTGTTTGCCAAGTCTGAGGA+TGG 0.513151 tig0019276:-174967 None:intergenic
TTGTTCAGAGTCTGAAGAAG+TGG 0.513493 tig0019276:-173817 None:intergenic
GAGTCTAAAGAAGTCGGTAC+TGG 0.513722 tig0019276:-174461 None:intergenic
TGATGCCAAAACAAGTGAAT+CGG 0.514096 tig0019276:+173320 Msa1372470:CDS
GGCACAACTCCATTCATGTC+AGG 0.515492 tig0019276:-173882 None:intergenic
GCAGCTAACGTTGGGAACAC+TGG 0.516288 tig0019276:+177712 Msa1372470:CDS
AGTACAACAGGCAACTTGAC+AGG 0.516642 tig0019276:+174686 Msa1372470:CDS
TTGGCAAACAAAATAGATGT+TGG 0.517860 tig0019276:+174979 Msa1372470:CDS
TATAATGGAATGGAATGTTA+TGG 0.520241 tig0019276:+179038 Msa1372470:three_prime_UTR
AGAAGGGTTTGAGAAGGTGG+TGG 0.521722 tig0019276:-171732 None:intergenic
TTGTTCAGACTCTATGGTAG+TGG 0.522311 tig0019276:-173631 None:intergenic
TTGTTCCAATTCACTTCTGT+CGG 0.522865 tig0019276:-173139 None:intergenic
GAAATATATGTACATTCTGC+CGG 0.524213 tig0019276:+179236 Msa1372470:three_prime_UTR
ATGTTCTTCTTGAGGAGAAG+GGG 0.526853 tig0019276:-171850 None:intergenic
TGAAGAATCTTCTGGGAAGT+GGG 0.529167 tig0019276:-171773 None:intergenic
GCTCAGGCTTTAGGCTATGT+GGG 0.532313 tig0019276:+178823 Msa1372470:CDS
ATCGACTTGTTCCGATTCCA+AGG 0.534276 tig0019276:-173916 None:intergenic
CCCAACGTTAGCTGCATGGA+GGG 0.538389 tig0019276:-177704 None:intergenic
ACTACCAGACTCTAAAGAAG+TGG 0.539985 tig0019276:-173109 None:intergenic
TATTAAATAACATTACTGAA+TGG 0.541772 tig0019276:+179156 Msa1372470:three_prime_UTR
GCCCTCCATGCAGCTAACGT+TGG 0.542788 tig0019276:+177703 Msa1372470:CDS
ACCAAACTGGTTGTATGTGC+AGG 0.542871 tig0019276:-178948 None:intergenic
TGCTGACTTGACTGAATTGG+TGG 0.543677 tig0019276:+173080 Msa1372470:CDS
GAGTTTCTGTTTGTTTAACT+CGG 0.544082 tig0019276:-172400 None:intergenic
GCCTGAGCTGCATCACCAAA+GGG 0.544140 tig0019276:-178808 None:intergenic
TTGTTTGGACTCTAAGGAAG+GGG 0.545864 tig0019276:-174282 None:intergenic
GAAGCTTCTTGAGAATAGGT+TGG 0.547720 tig0019276:-171667 None:intergenic
ATTGGCGACGACGGCACAAG+AGG 0.548199 tig0019276:+178759 Msa1372470:CDS
AGTAATAATCCCTACATAGG+TGG 0.549944 tig0019276:-179012 None:intergenic
GAGGAAGAAGATTCTCAAGT+TGG 0.551088 tig0019276:+172774 Msa1372470:CDS
TTGCTCAGACTGTAAAGAAG+TGG 0.551220 tig0019276:-173445 None:intergenic
TCTTTACAGTCTGAGCAAGA+TGG 0.552610 tig0019276:+173450 Msa1372470:CDS
AGAATAGACAATGGATGAGG+TGG 0.553528 tig0019276:-179125 None:intergenic
TCAGTTCAGATGGCTAGTGA+TGG 0.553869 tig0019276:+175060 Msa1372470:CDS
GCGACGACGGCACAAGAGGT+TGG 0.554934 tig0019276:+178763 Msa1372470:CDS
TCTTCATCAACAACACCCTC+AGG 0.555654 tig0019276:-172426 None:intergenic
TTGTTCAGCCTCTAAAGAAG+TGG 0.555861 tig0019276:-174561 None:intergenic
TATTACTGTATATAATGGAA+TGG 0.555994 tig0019276:+179028 Msa1372470:three_prime_UTR
TGAATGGAAAAGTTCCAAAA+GGG 0.556611 tig0019276:+179172 Msa1372470:three_prime_UTR
ATGAACTTCCCACCTATGTA+GGG 0.558113 tig0019276:+179003 Msa1372470:three_prime_UTR
ACTTGTTTGGACTCTAAGGA+AGG 0.560648 tig0019276:-174284 None:intergenic
TGGAGTAGAAAATGGAAGAA+GGG 0.561739 tig0019276:-171748 None:intergenic
AGCGAAACAAATGATATGGC+TGG 0.562321 tig0019276:+174035 Msa1372470:CDS
AGTGCAACAGACAATCTTAG+TGG 0.563780 tig0019276:+173198 Msa1372470:CDS
AGAGATACATTCAGTTCAGA+TGG 0.565033 tig0019276:+175050 Msa1372470:CDS
ACTTGCAAGTCATTGATCAC+AGG 0.567258 tig0019276:-172636 None:intergenic
TGACATAACTGAATCTGCGC+TGG 0.568271 tig0019276:+173512 Msa1372470:CDS
TTGTTTGGACTCTAAAGATG+TGG 0.568461 tig0019276:-174096 None:intergenic
GGCTATGTGGGTTATGCAGG+TGG 0.570519 tig0019276:+178835 Msa1372470:CDS
TGTTCCCAACGTTAGCTGCA+TGG 0.571239 tig0019276:-177708 None:intergenic
AAGTTGAATTGAGAAGTGTA+GGG 0.572629 tig0019276:-171818 None:intergenic
ATGAGAATAGACAATGGATG+AGG 0.572687 tig0019276:-179128 None:intergenic
GACGGTACCTCAGAGGGATG+AGG 0.573261 tig0019276:-175512 None:intergenic
GACTCTGAAGAAGTGGACTC+TGG 0.573904 tig0019276:-173252 None:intergenic
TCATCTTCAACTGTGGTAGT+TGG 0.574935 tig0019276:+172531 Msa1372470:CDS
TGATGTTGACATATCTGAAT+CGG 0.575447 tig0019276:+173227 Msa1372470:CDS
CACCGGTATCTACTTCTTTG+GGG 0.576765 tig0019276:+174738 Msa1372470:CDS
AAGGAAGTGGATAATGGCAC+CGG 0.576910 tig0019276:-174641 None:intergenic
AGCCTGAGCTGCATCACCAA+AGG 0.577538 tig0019276:-178809 None:intergenic
CAGGGAAAATATTTCAAGAA+CGG 0.579773 tig0019276:+175457 Msa1372470:intron
CAGTTCAGATGGCTAGTGAT+GGG 0.581491 tig0019276:+175061 Msa1372470:CDS
TGCACTGTAACCATCTTGCT+CGG 0.582003 tig0019276:-173181 None:intergenic
TTGGAGTAGAAAATGGAAGA+AGG 0.582134 tig0019276:-171749 None:intergenic
GACCCCAAAGAAGTAGATAC+CGG 0.582950 tig0019276:-174740 None:intergenic
GACTCTAAAGAAGTCGACAT+TGG 0.584037 tig0019276:-174182 None:intergenic
TCTTCAGAGTCAGAGCAAGT+TGG 0.584957 tig0019276:+173357 Msa1372470:CDS
ACCATAGAGTCTGAACAAGT+TGG 0.585165 tig0019276:+173636 Msa1372470:CDS
TGCCAGGACGGTACCTCAGA+GGG 0.585420 tig0019276:-175518 None:intergenic
TGTAGGGGTGTGGTGAGTAG+TGG 0.585676 tig0019276:-171802 None:intergenic
TTGCTCGGTCTCTAAAGAAG+TGG 0.586443 tig0019276:-173166 None:intergenic
AATTGAGAAGTGTAGGGGTG+TGG 0.587912 tig0019276:-171812 None:intergenic
GTAATAATCCCTACATAGGT+GGG 0.590512 tig0019276:-179011 None:intergenic
TCGCCTTTAACTATATGTAT+CGG 0.591712 tig0019276:-177802 None:intergenic
GGTGCAACTGACAACCTGAC+TGG 0.592148 tig0019276:+174404 Msa1372470:CDS
AGTGCAACAGACAATCTGGC+TGG 0.593488 tig0019276:+174314 Msa1372470:CDS
AGTGCAACAGACGATCTGGC+TGG 0.593999 tig0019276:+174128 Msa1372470:CDS
TTGTACGGACTCTAAAGAGA+AGG 0.594348 tig0019276:-174003 None:intergenic
GGATTTATCATTATAAGACA+TGG 0.595192 tig0019276:+177733 Msa1372470:CDS
CTTGTTTGGACTCTAAGGAA+GGG 0.598794 tig0019276:-174283 None:intergenic
ACCAAAACAGAAGATGACCC+TGG 0.601497 tig0019276:-176611 None:intergenic
TACAGTAATAATCCCTACAT+AGG 0.601791 tig0019276:-179015 None:intergenic
ATTGTTTCTCTATTAACAGA+CGG 0.602319 tig0019276:-174488 None:intergenic
TGACTTATGTGAGTCGGCAC+CGG 0.602980 tig0019276:+174721 Msa1372470:CDS
GGTGTGGTGAGTAGTGGTGA+AGG 0.606408 tig0019276:-171796 None:intergenic
AGTGCAACAGACAACCTGAC+TGG 0.606595 tig0019276:+174221 Msa1372470:CDS
AGAGCAACAGACAATGAGAC+TGG 0.606673 tig0019276:+173849 Msa1372470:CDS
GTGTATATCAGGGAACTCAT+GGG 0.608071 tig0019276:+176497 Msa1372470:CDS
ATCACCAAAGGGACTTCTAG+TGG 0.609039 tig0019276:-178797 None:intergenic
TAAAGAAGTGGATATTGGCA+CGG 0.609477 tig0019276:-174549 None:intergenic
CAAACAGAAACTCGTGCCTG+AGG 0.609745 tig0019276:+172410 Msa1372470:CDS
GAGGGTGTTGTTGATGAAGA+AGG 0.609745 tig0019276:+172429 Msa1372470:CDS
TCTTTAGAGACCGAGCAAGA+TGG 0.609839 tig0019276:+173171 Msa1372470:CDS
AGTGTCGATCCTGACATGAA+TGG 0.610069 tig0019276:+173873 Msa1372470:CDS
AGTGCAACAAGCAATCTGAC+TGG 0.612324 tig0019276:+173570 Msa1372470:CDS
ATAGAAATGAGAATAGACAA+TGG 0.613183 tig0019276:-179134 None:intergenic
CATCAACACCATCAATCTGG+TGG 0.617106 tig0019276:-174511 None:intergenic
AGTGTGGATAGAGCAGCAAA+CGG 0.618569 tig0019276:+173036 Msa1372470:CDS
AATGCAAGAGAAAATCTGAC+TGG 0.618931 tig0019276:+173291 Msa1372470:CDS
TGGCTGATGGAGTTGGTCAG+TGG 0.619896 tig0019276:+176198 Msa1372470:CDS
AATTGAATCATCTTCAACTG+TGG 0.621843 tig0019276:+172524 Msa1372470:CDS
TGGCACCGGTTCACTTAACT+CGG 0.622967 tig0019276:-174627 None:intergenic
AATGGAAGAAGGGTTTGAGA+AGG 0.624751 tig0019276:-171738 None:intergenic
AAACAGAAACTCGTGCCTGA+GGG 0.626228 tig0019276:+172411 Msa1372470:CDS
ATTGCAACAGACAATCTGAC+TGG 0.626528 tig0019276:+173477 Msa1372470:CDS
CCGCTGAAACACATTCTCCA+GGG 0.628366 tig0019276:+176594 Msa1372470:CDS
AAAACTGAATTCATGAAACA+TGG 0.628437 tig0019276:-177779 None:intergenic
TCTTCTTCCTCAGACACACT+CGG 0.630495 tig0019276:-172762 None:intergenic
GAGGATGATAGTAACTTAAG+GGG 0.634021 tig0019276:+172498 Msa1372470:CDS
AGTTGACAATGGCAATAGTG+TGG 0.634719 tig0019276:+173020 Msa1372470:CDS
TTGCTTGCCTCATCCCTCTG+AGG 0.636337 tig0019276:+175505 Msa1372470:CDS
TCCCAACGTTAGCTGCATGG+AGG 0.637846 tig0019276:-177705 None:intergenic
TAATACTGGAGTGTATATCA+GGG 0.638011 tig0019276:+176487 Msa1372470:CDS
CAACTGAGTCATCCACGACA+TGG 0.638279 tig0019276:-174784 None:intergenic
ACAAGTTGATTATAGTGCAA+CGG 0.649019 tig0019276:+174580 Msa1372470:CDS
CCCTGGAGAATGTGTTTCAG+CGG 0.654653 tig0019276:-176594 None:intergenic
GCAGCAAACGGCGTAGCAGG+TGG 0.656131 tig0019276:+173048 Msa1372470:CDS
GAAGAATCTTCTGGGAAGTG+GGG 0.656238 tig0019276:-171772 None:intergenic
GGTTCAGAGTCTAAAGAAGT+CGG 0.656325 tig0019276:-174467 None:intergenic
TGAAAGAAATCGCCATGTCG+TGG 0.657765 tig0019276:+174772 Msa1372470:CDS
GCTTTGACAGAGCATCCGGA+TGG 0.657857 tig0019276:+172327 Msa1372470:intron
CATCTCTCTACAGTTGACAA+TGG 0.671445 tig0019276:+173009 Msa1372470:CDS
ATGCCAGGACGGTACCTCAG+AGG 0.673301 tig0019276:-175519 None:intergenic
CGACCACTCAGAAATCATTG+AGG 0.674072 tig0019276:+177825 Msa1372470:CDS
TGACGGCATAACAAGTGAGT+TGG 0.674731 tig0019276:+174436 Msa1372470:CDS
CTGACTGGTAATGTTGATGA+CGG 0.675013 tig0019276:+174419 Msa1372470:CDS
GCCACAACTAGCCAGTTTAG+GGG 0.678427 tig0019276:-176179 None:intergenic
TACAAGATCGATCTAAACGA+TGG 0.679121 tig0019276:+178060 Msa1372470:CDS
TGTTGTTCCGAGTGTGTCTG+AGG 0.681569 tig0019276:+172755 Msa1372470:CDS
GGTGCAACAGACAATGTGAC+TGG 0.685255 tig0019276:+173384 Msa1372470:CDS
ACTTAACTCGGTATCAACAA+CGG 0.685429 tig0019276:-174615 None:intergenic
TGATACTGACTTATGTGAGT+CGG 0.686378 tig0019276:+174715 Msa1372470:CDS
ACAAGCTAGCCTGAAACCTG+AGG 0.691163 tig0019276:+178164 Msa1372470:CDS
AGCATGGAAACCATAGACAG+TGG 0.696232 tig0019276:-171689 None:intergenic
ATACCTCAATGATTTCTGAG+TGG 0.696662 tig0019276:-177828 None:intergenic
TGTTGATGCTGAGTTTAGTG+AGG 0.696992 tig0019276:+174526 Msa1372470:CDS
AGTTGAATTGAGAAGTGTAG+GGG 0.715031 tig0019276:-171817 None:intergenic
ACAACAGGCAACTTGACAGG+CGG 0.720179 tig0019276:+174689 Msa1372470:CDS
ATTGAAACAGACAATCTGAG+TGG 0.728724 tig0019276:+173663 Msa1372470:CDS
TGTTGAACAAATGAGCAATG+AGG 0.759356 tig0019276:+172479 Msa1372470:CDS
GATGATAGTGATGATCAACA+TGG 0.774921 tig0019276:+172690 Msa1372470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGATTTATTTTTATAAACT+AGG - tig0019276:176986-177005 None:intergenic 10.0%
!! TAAAAATAAATCTTAGAATT+TGG + tig0019276:176992-177011 Msa1372470:intron 10.0%
!! AAAAATAAATCTTAGAATTT+GGG + tig0019276:176993-177012 Msa1372470:intron 10.0%
!! TATTAAAAAAAATCAAGATA+AGG - tig0019276:178528-178547 None:intergenic 10.0%
!! TTAACATAAACATTAATTCA+TGG - tig0019276:171628-171647 None:intergenic 15.0%
!!! AATTGATAAACATTTTAAGT+TGG + tig0019276:172659-172678 Msa1372470:CDS 15.0%
!! TTCAAAGTTTGATTAAATTA+GGG - tig0019276:175608-175627 None:intergenic 15.0%
!! TTTCAAAGTTTGATTAAATT+AGG - tig0019276:175609-175628 None:intergenic 15.0%
!!! TATATTTTCTTAATTTTGCT+AGG + tig0019276:175632-175651 Msa1372470:intron 15.0%
!!! ATATTTTCTTAATTTTGCTA+GGG + tig0019276:175633-175652 Msa1372470:intron 15.0%
!! AATGAAATTGTTAAATTTCT+AGG + tig0019276:175886-175905 Msa1372470:intron 15.0%
!!! TGTTATATTTTAAGTGATTT+TGG + tig0019276:176069-176088 Msa1372470:intron 15.0%
!! GAGGAAAATAAAAATATATT+TGG - tig0019276:176308-176327 None:intergenic 15.0%
!!! TGTATACAAATTATTTTTGT+AGG - tig0019276:177995-178014 None:intergenic 15.0%
!!! AAAGTACATTTTATATAATG+TGG - tig0019276:178304-178323 None:intergenic 15.0%
!! TATTCAAAATATCAAAATGA+TGG - tig0019276:178348-178367 None:intergenic 15.0%
!!! ATTTTTTAATTTTCAAACAG+TGG - tig0019276:179068-179087 None:intergenic 15.0%
!! TATTAAATAACATTACTGAA+TGG + tig0019276:179156-179175 Msa1372470:three_prime_UTR 15.0%
!! AAGAAAAAATGAATGAACAA+AGG - tig0019276:171554-171573 None:intergenic 20.0%
!!! TTTTTTTCCTTTTTCTTTCT+TGG + tig0019276:171932-171951 Msa1372470:intron 20.0%
!!! TTTTTTCCTTTTTCTTTCTT+GGG + tig0019276:171933-171952 Msa1372470:intron 20.0%
!!! TTTTTGTCTATTTTCCATTT+TGG + tig0019276:171956-171975 Msa1372470:intron 20.0%
!!! AAATCTACTACTTTGAAAAA+GGG + tig0019276:172254-172273 Msa1372470:intron 20.0%
!! ATAACTATCAAAAACTTCAA+TGG - tig0019276:172949-172968 None:intergenic 20.0%
!! TGAAAATCCAATACTTAATA+CGG + tig0019276:175023-175042 Msa1372470:CDS 20.0%
!! TTTATGGTGCAATTTAAATA+TGG + tig0019276:175289-175308 Msa1372470:intron 20.0%
!! TTATGGTGCAATTTAAATAT+GGG + tig0019276:175290-175309 Msa1372470:intron 20.0%
!!! ATTTAAATATGGGATTTGTT+AGG + tig0019276:175300-175319 Msa1372470:intron 20.0%
!! TTGTTGAAATACTATTATCT+AGG + tig0019276:175376-175395 Msa1372470:intron 20.0%
!!! AATTTTATAAGCTAGAACAA+GGG - tig0019276:175716-175735 None:intergenic 20.0%
!!! TAATTTTATAAGCTAGAACA+AGG - tig0019276:175717-175736 None:intergenic 20.0%
!!! TGTTCTAGCTTATAAAATTA+TGG + tig0019276:175717-175736 Msa1372470:intron 20.0%
!! CTTGAGTAAATAAATCATTT+GGG - tig0019276:175980-175999 None:intergenic 20.0%
!! ACTTGAGTAAATAAATCATT+TGG - tig0019276:175981-176000 None:intergenic 20.0%
!!! ATTATTTTCCATCTACTTTA+AGG - tig0019276:176102-176121 None:intergenic 20.0%
!! AAAACATTATTTCCATTTGT+TGG + tig0019276:176361-176380 Msa1372470:intron 20.0%
!! TCAAATTTGAACATAATAAG+TGG + tig0019276:176683-176702 Msa1372470:intron 20.0%
!! CAAATTTGAACATAATAAGT+GGG + tig0019276:176684-176703 Msa1372470:intron 20.0%
!! ATAACTCTACCATATAAAAT+CGG + tig0019276:177022-177041 Msa1372470:intron 20.0%
!!! TTGATATTTTGAATAAAGTG+TGG + tig0019276:178353-178372 Msa1372470:intron 20.0%
!!! TATTACTGTATATAATGGAA+TGG + tig0019276:179028-179047 Msa1372470:three_prime_UTR 20.0%
!!! TCATTCATTTTTTCTTACAC+AGG + tig0019276:171558-171577 Msa1372470:five_prime_UTR 25.0%
!! AATTCATGGATTATGTTTCT+GGG - tig0019276:171614-171633 None:intergenic 25.0%
!! TAATTCATGGATTATGTTTC+TGG - tig0019276:171615-171634 None:intergenic 25.0%
! TACAAATACATTTGATCTGT+TGG + tig0019276:172087-172106 Msa1372470:intron 25.0%
!! CAAATCTACTACTTTGAAAA+AGG + tig0019276:172253-172272 Msa1372470:intron 25.0%
!! TGATACTAATGATAGTGAAT+TGG + tig0019276:174157-174176 Msa1372470:CDS 25.0%
!!! TTAGACTCTAAAGTAGATAT+TGG - tig0019276:174371-174390 None:intergenic 25.0%
!! ATTGTTTCTCTATTAACAGA+CGG - tig0019276:174491-174510 None:intergenic 25.0%
!!! AGTTTTATTTCCTTTCCTTA+TGG + tig0019276:174839-174858 Msa1372470:intron 25.0%
! ATACAGAAAAGAGAAATAGT+TGG - tig0019276:175091-175110 None:intergenic 25.0%
!! ACATTTCTTTTCAACGAAAA+AGG - tig0019276:175193-175212 None:intergenic 25.0%
! AATGATATAGAGGTTCTTTA+TGG + tig0019276:175273-175292 Msa1372470:intron 25.0%
! TTGATTAATTGAATGTGTAC+AGG + tig0019276:175438-175457 Msa1372470:intron 25.0%
! TGATTAATTGAATGTGTACA+GGG + tig0019276:175439-175458 Msa1372470:intron 25.0%
! TGATAGAAGTAGATGAAATT+TGG + tig0019276:175858-175877 Msa1372470:intron 25.0%
!! TGATTTGCAATTACATATTG+CGG - tig0019276:176020-176039 None:intergenic 25.0%
! ACTTAAAATATAACAAGCGT+AGG - tig0019276:176064-176083 None:intergenic 25.0%
! TGATGATTCAATTGTACTAT+CGG - tig0019276:176273-176292 None:intergenic 25.0%
! TACCAACTTAGAATTTATCT+TGG + tig0019276:177304-177323 Msa1372470:intron 25.0%
! ACCAACTTAGAATTTATCTT+GGG + tig0019276:177305-177324 Msa1372470:intron 25.0%
! TTATAGACCTTATAAACCAA+GGG - tig0019276:177373-177392 None:intergenic 25.0%
! TTTATAGACCTTATAAACCA+AGG - tig0019276:177374-177393 None:intergenic 25.0%
!! TTTGAAATAACCGTTTCATT+CGG + tig0019276:177439-177458 Msa1372470:intron 25.0%
! ATGTATAGCAATTTATTTGC+AGG + tig0019276:177681-177700 Msa1372470:intron 25.0%
! GGATTTATCATTATAAGACA+TGG + tig0019276:177733-177752 Msa1372470:CDS 25.0%
! AAAACTGAATTCATGAAACA+TGG - tig0019276:177782-177801 None:intergenic 25.0%
! TTTCCGATACATATAGTTAA+AGG + tig0019276:177799-177818 Msa1372470:CDS 25.0%
! GATGGAAAAGAAAGAAATAA+AGG - tig0019276:178200-178219 None:intergenic 25.0%
!!! TTATTTCTTTCTTTTCCATC+TGG + tig0019276:178200-178219 Msa1372470:intron 25.0%
! GGGATTATTACTGTATATAA+TGG + tig0019276:179023-179042 Msa1372470:three_prime_UTR 25.0%
!! TATAATGGAATGGAATGTTA+TGG + tig0019276:179038-179057 Msa1372470:three_prime_UTR 25.0%
! ATAGAAATGAGAATAGACAA+TGG - tig0019276:179137-179156 None:intergenic 25.0%
! AAGTTGAATTGAGAAGTGTA+GGG - tig0019276:171821-171840 None:intergenic 30.0%
CAAAAACCCAAGAAAGAAAA+AGG - tig0019276:171942-171961 None:intergenic 30.0%
!!! ATTTTCCATTTTGGTTAGTG+AGG + tig0019276:171965-171984 Msa1372470:intron 30.0%
! GTATTTTTCGTTGATACTTG+TGG + tig0019276:172276-172295 Msa1372470:intron 30.0%
!!! GGAAGTTTTTTGTTCACATT+TGG + tig0019276:172348-172367 Msa1372470:CDS 30.0%
GAGTTTCTGTTTGTTTAACT+CGG - tig0019276:172403-172422 None:intergenic 30.0%
ATGAGGATGATAGTAACTTA+AGG + tig0019276:172496-172515 Msa1372470:CDS 30.0%
TGAGGATGATAGTAACTTAA+GGG + tig0019276:172497-172516 Msa1372470:CDS 30.0%
AATTGAATCATCTTCAACTG+TGG + tig0019276:172524-172543 Msa1372470:CDS 30.0%
!!! AGGTGATATTTTGACTTATG+TGG + tig0019276:172902-172921 Msa1372470:CDS 30.0%
! TCAATGGACAATGTTGTTTA+CGG - tig0019276:172933-172952 None:intergenic 30.0%
TAGTTATTGTTCTGTTTGTC+AGG + tig0019276:172962-172981 Msa1372470:intron 30.0%
TGATGTTGACATATCTGAAT+CGG + tig0019276:173227-173246 Msa1372470:CDS 30.0%
TGATATTGCAAGAAGTGAAT+TGG + tig0019276:173971-173990 Msa1372470:CDS 30.0%
! TGATAGCGAAACAAATGATA+TGG + tig0019276:174031-174050 Msa1372470:CDS 30.0%
! TGCACTATAATCAACTTGTT+TGG - tig0019276:174114-174133 None:intergenic 30.0%
TGATGCCACAATAAATGAAT+TGG + tig0019276:174250-174269 Msa1372470:CDS 30.0%
TTGCACCAATTCATTTATTG+TGG - tig0019276:174258-174277 None:intergenic 30.0%
! TGATGCTGACAATATTGATT+TGG + tig0019276:174343-174362 Msa1372470:CDS 30.0%
!! GAGTCTAAACAAGTTGATTA+TGG + tig0019276:174383-174402 Msa1372470:CDS 30.0%
!! ACAAGTTGATTATAGTGCAA+CGG + tig0019276:174115-174134 Msa1372470:CDS 30.0%
!! GTACTATAATTAGCTTGTTC+AGG - tig0019276:174671-174690 None:intergenic 30.0%
CAAGCTAATTATAGTACAAC+AGG + tig0019276:174674-174693 Msa1372470:CDS 30.0%
TGAAATGAAAAAGTCAGCAT+TGG + tig0019276:174814-174833 Msa1372470:CDS 30.0%
TTTATTTCCTTTCCTTATGG+AGG + tig0019276:174842-174861 Msa1372470:intron 30.0%
TTATTTCCTTTCCTTATGGA+GGG + tig0019276:174843-174862 Msa1372470:intron 30.0%
GCTATAATTCACACTTTACT+GGG + tig0019276:174865-174884 Msa1372470:intron 30.0%
! GTGTCAATTTTGTGTTTAGT+TGG + tig0019276:174933-174952 Msa1372470:intron 30.0%
TTGTGTTTAGTTGGATGATT+TGG + tig0019276:174942-174961 Msa1372470:intron 30.0%
TTGGCAAACAAAATAGATGT+TGG + tig0019276:174979-174998 Msa1372470:CDS 30.0%
TTAGGTAAATGTATTCACAC+TGG + tig0019276:175156-175175 Msa1372470:intron 30.0%
TCGTTGAAAAGAAATGTTTC+TGG + tig0019276:175196-175215 Msa1372470:intron 30.0%
CGTTGAAAAGAAATGTTTCT+GGG + tig0019276:175197-175216 Msa1372470:intron 30.0%
! AACATTCTAGTTGCTGAATT+TGG + tig0019276:175221-175240 Msa1372470:intron 30.0%
AAAGTCTGAGAATGATATAG+AGG + tig0019276:175263-175282 Msa1372470:intron 30.0%
CAGGGAAAATATTTCAAGAA+CGG + tig0019276:175457-175476 Msa1372470:intron 30.0%
!! AAATTAGGGTACTGAAATTC+AGG - tig0019276:175594-175613 None:intergenic 30.0%
!!! CATTGCTTTTGTTTCTGTTT+TGG + tig0019276:175761-175780 Msa1372470:intron 30.0%
GATTTGCAATTACATATTGC+GGG - tig0019276:176019-176038 None:intergenic 30.0%
TAAAATATAACAAGCGTAGG+CGG - tig0019276:176061-176080 None:intergenic 30.0%
TCCTACTAATAACATCTTTC+AGG + tig0019276:176121-176140 Msa1372470:intron 30.0%
TCCTGAAAGATGTTATTAGT+AGG - tig0019276:176125-176144 None:intergenic 30.0%
! ATATTATTTCTCCCCTAAAC+TGG + tig0019276:176168-176187 Msa1372470:CDS 30.0%
!!! GAGTAAAGAGTATCTTTTCA+AGG + tig0019276:176387-176406 Msa1372470:intron 30.0%
ACTGAAAAATACAAGATCAG+AGG - tig0019276:176426-176445 None:intergenic 30.0%
TAGACCAGAAATAATTATGC+AGG + tig0019276:176461-176480 Msa1372470:intron 30.0%
AGACCAGAAATAATTATGCA+GGG + tig0019276:176462-176481 Msa1372470:intron 30.0%
TAATACTGGAGTGTATATCA+GGG + tig0019276:176487-176506 Msa1372470:CDS 30.0%
!!! GTTTTGGTTGCTTATTTTGA+TGG + tig0019276:176626-176645 Msa1372470:CDS 30.0%
GCAGTACTATAACATAATTC+CGG - tig0019276:176820-176839 None:intergenic 30.0%
AACTAGGATAATTCCTCAAA+TGG - tig0019276:176970-176989 None:intergenic 30.0%
!! CATATAAAATCGGCTTGTAA+GGG + tig0019276:177032-177051 Msa1372470:intron 30.0%
!! ATATAAAATCGGCTTGTAAG+GGG + tig0019276:177033-177052 Msa1372470:intron 30.0%
GTCCAAACTTTATACTACTT+AGG + tig0019276:177062-177081 Msa1372470:intron 30.0%
TTCAAAAGCTTAAGCTTCAA+AGG - tig0019276:177425-177444 None:intergenic 30.0%
TAAACAAAATCTATGTCTGC+CGG - tig0019276:177585-177604 None:intergenic 30.0%
!! CAGACATAGATTTTGTTTAC+TGG + tig0019276:177586-177605 Msa1372470:intron 30.0%
TTTACTGGCAACTTAGATTT+AGG + tig0019276:177601-177620 Msa1372470:intron 30.0%
TCGCCTTTAACTATATGTAT+CGG - tig0019276:177805-177824 None:intergenic 30.0%
TGTGAAAATGAGGAAATGTT+AGG - tig0019276:177865-177884 None:intergenic 30.0%
CATACTTCATTTGAACATTG+AGG + tig0019276:177905-177924 Msa1372470:intron 30.0%
ATTGAGGCTCAAAATTATAG+AGG + tig0019276:177921-177940 Msa1372470:intron 30.0%
! AACATATACGTATAACTTGC+AGG + tig0019276:178723-178742 Msa1372470:intron 30.0%
TGTAACTGTTATAGTGTCAT+TGG + tig0019276:178870-178889 Msa1372470:CDS 30.0%
TACAGTAATAATCCCTACAT+AGG - tig0019276:179018-179037 None:intergenic 30.0%
TGAATGGAAAAGTTCCAAAA+GGG + tig0019276:179172-179191 Msa1372470:three_prime_UTR 30.0%
GAAATATATGTACATTCTGC+CGG + tig0019276:179236-179255 Msa1372470:three_prime_UTR 30.0%
TGGAGTAGAAAATGGAAGAA+GGG - tig0019276:171751-171770 None:intergenic 35.0%
TTGGAGTAGAAAATGGAAGA+AGG - tig0019276:171752-171771 None:intergenic 35.0%
! AGTTGAATTGAGAAGTGTAG+GGG - tig0019276:171820-171839 None:intergenic 35.0%
! GAAGTTGAATTGAGAAGTGT+AGG - tig0019276:171822-171841 None:intergenic 35.0%
AGTTCTTCATGTTCTTCTTG+AGG - tig0019276:171861-171880 None:intergenic 35.0%
AAACACCTCACTAACCAAAA+TGG - tig0019276:171973-171992 None:intergenic 35.0%
GAAAATCACACACCGTAATT+GGG - tig0019276:172136-172155 None:intergenic 35.0%
!! TGGTTTGTTCATCATACTTG+AGG + tig0019276:172296-172315 Msa1372470:intron 35.0%
GTGAACAAAAAACTTCCATC+CGG - tig0019276:172345-172364 None:intergenic 35.0%
!!! TGAAGAAGGTGTTAGTGTTT+TGG + tig0019276:172443-172462 Msa1372470:CDS 35.0%
TGTTGAACAAATGAGCAATG+AGG + tig0019276:172479-172498 Msa1372470:CDS 35.0%
GAGGATGATAGTAACTTAAG+GGG + tig0019276:172498-172517 Msa1372470:CDS 35.0%
! GATGATAGTGATGATCAACA+TGG + tig0019276:172690-172709 Msa1372470:CDS 35.0%
TTCTCTTCAGTTTCCAAAGA+AGG - tig0019276:172876-172895 None:intergenic 35.0%
GAAACTGAAGAGAAAGAAGA+AGG + tig0019276:172882-172901 Msa1372470:CDS 35.0%
TTGTTCCAATTCACTTCTGT+CGG - tig0019276:173142-173161 None:intergenic 35.0%
AATGCAAGAGAAAATCTGAC+TGG + tig0019276:173291-173310 Msa1372470:CDS 35.0%
TGATGCCAAAACAAGTGAAT+CGG + tig0019276:173320-173339 Msa1372470:CDS 35.0%
! GACTCTGAAGAAATTGATAC+TGG - tig0019276:173348-173367 None:intergenic 35.0%
! TTGTTCAGACTCTGAAAAAG+TGG - tig0019276:173541-173560 None:intergenic 35.0%
! TTTTCAGAGTCTGAACAAGA+TGG + tig0019276:173543-173562 Msa1372470:CDS 35.0%
ATTGAAACAGACAATCTGAG+TGG + tig0019276:173663-173682 Msa1372470:CDS 35.0%
AGTGAAACAGACAATCTTAC+TGG + tig0019276:173756-173775 Msa1372470:CDS 35.0%
ATTATCCACTTCCTTGGAAT+CGG + tig0019276:173905-173924 Msa1372470:CDS 35.0%
!! TTCGCTATCATTAGCTTGTA+CGG - tig0019276:174021-174040 None:intergenic 35.0%
! TTGTTTGGACTCTAAAGATG+TGG - tig0019276:174099-174118 None:intergenic 35.0%
! ATCAACTTGTTTGGACTCTA+AGG - tig0019276:174105-174124 None:intergenic 35.0%
! TGCACTGTAATCAACTTGTT+TGG - tig0019276:174300-174319 None:intergenic 35.0%
TAAAGAAGTGGATATTGGCA+CGG - tig0019276:174552-174571 None:intergenic 35.0%
ACTTAACTCGGTATCAACAA+CGG - tig0019276:174618-174637 None:intergenic 35.0%
!! ATTAGCTTGTTCAGGTTCTA+AGG - tig0019276:174663-174682 None:intergenic 35.0%
!! TGATACTGACTTATGTGAGT+CGG + tig0019276:174715-174734 Msa1372470:CDS 35.0%
GGCTATAATTCACACTTTAC+TGG + tig0019276:174864-174883 Msa1372470:intron 35.0%
!! TATTTTGTTTGCCAAGTCTG+AGG - tig0019276:174974-174993 None:intergenic 35.0%
TCTGGTACCGTATTAAGTAT+TGG - tig0019276:175033-175052 None:intergenic 35.0%
ATCTGAACTGAATGTATCTC+TGG - tig0019276:175051-175070 None:intergenic 35.0%
AGAGATACATTCAGTTCAGA+TGG + tig0019276:175050-175069 Msa1372470:CDS 35.0%
TTCTAATCCCTATTAATGCC+AGG - tig0019276:175537-175556 None:intergenic 35.0%
TAGGGATTAGAAATGAAGTC+AGG + tig0019276:175545-175564 Msa1372470:intron 35.0%
CAAGTACTCGCAGAAATTTA+TGG - tig0019276:175827-175846 None:intergenic 35.0%
GCTTGAATCCTTAAAGTAGA+TGG + tig0019276:176091-176110 Msa1372470:intron 35.0%
AACTAACATTCTGTGCAGAA+AGG - tig0019276:176238-176257 None:intergenic 35.0%
CAAGTTCACAAATTACAACG+AGG - tig0019276:176327-176346 None:intergenic 35.0%
TCTTTACTCAGTCCAACAAA+TGG - tig0019276:176376-176395 None:intergenic 35.0%
CAAGATCAGAGGTTTGATAA+TGG - tig0019276:176415-176434 None:intergenic 35.0%
ACTCCCTGCATAATTATTTC+TGG - tig0019276:176468-176487 None:intergenic 35.0%
AATTATGCAGGGAGTAATAC+TGG + tig0019276:176473-176492 Msa1372470:intron 35.0%
GTAATACTGGAGTGTATATC+AGG + tig0019276:176486-176505 Msa1372470:CDS 35.0%
GGTAGCTCAAATGAATGATA+AGG + tig0019276:176705-176724 Msa1372470:intron 35.0%
AACAAAAACGTCACTCAATC+TGG - tig0019276:176736-176755 None:intergenic 35.0%
GACACAAACGTAATACTATG+AGG - tig0019276:176790-176809 None:intergenic 35.0%
TACGTTTGTGTCAATATGTC+CGG + tig0019276:176798-176817 Msa1372470:intron 35.0%
! CAGAAGCATGTTAGATATGT+AGG - tig0019276:176886-176905 None:intergenic 35.0%
!! ATGTTTGTAAGTGCCATTTG+AGG + tig0019276:176954-176973 Msa1372470:intron 35.0%
!! CCTTACAAGCCGATTTTATA+TGG - tig0019276:177034-177053 None:intergenic 35.0%
!! CCATATAAAATCGGCTTGTA+AGG + tig0019276:177031-177050 Msa1372470:intron 35.0%
GGCCTAAGTAGTATAAAGTT+TGG - tig0019276:177067-177086 None:intergenic 35.0%
TGGATATTCCACTCTAATTG+AGG - tig0019276:177204-177223 None:intergenic 35.0%
CTTATACTAGATCAGCTGTT+GGG - tig0019276:177278-177297 None:intergenic 35.0%
GCCCAAGATAAATTCTAAGT+TGG - tig0019276:177309-177328 None:intergenic 35.0%
!!! CATTACACGGTGGTTTTAAA+TGG - tig0019276:177341-177360 None:intergenic 35.0%
AGCTTAAGCTTCAAAGGAAT+GGG - tig0019276:177419-177438 None:intergenic 35.0%
AAGCTTAAGCTTCAAAGGAA+TGG - tig0019276:177420-177439 None:intergenic 35.0%
AAATAACCGTTTCATTCGGA+AGG + tig0019276:177443-177462 Msa1372470:intron 35.0%
! CTTTTTCCTTCCGAATGAAA+CGG - tig0019276:177452-177471 None:intergenic 35.0%
AAACAAAATCTATGTCTGCC+GGG - tig0019276:177584-177603 None:intergenic 35.0%
!!! GGCATTTGATGTTTTGAAGA+TGG - tig0019276:177761-177780 None:intergenic 35.0%
ATACCTCAATGATTTCTGAG+TGG - tig0019276:177831-177850 None:intergenic 35.0%
GAAAATGAGGAAATGTTAGG+AGG - tig0019276:177862-177881 None:intergenic 35.0%
TCTCAGATCATGTGAAAATG+AGG - tig0019276:177875-177894 None:intergenic 35.0%
TCAAAATTATAGAGGTGGCT+TGG + tig0019276:177929-177948 Msa1372470:intron 35.0%
CTCAAAGCAAAATGTGTTTC+AGG + tig0019276:178035-178054 Msa1372470:intron 35.0%
TACAAGATCGATCTAAACGA+TGG + tig0019276:178060-178079 Msa1372470:CDS 35.0%
! GATGGTGATGTGATTGTATT+TGG + tig0019276:178078-178097 Msa1372470:CDS 35.0%
GTGATTGTATTTGGCACAAA+TGG + tig0019276:178087-178106 Msa1372470:CDS 35.0%
GAAAAATAGACAGATCCAGA+TGG - tig0019276:178218-178237 None:intergenic 35.0%
AATTTGAACATGCGATCTCT+TGG + tig0019276:178464-178483 Msa1372470:intron 35.0%
!! CTCTACTTTTCTCTTCAACA+AGG - tig0019276:178572-178591 None:intergenic 35.0%
CTAACAAGTTAGCAATAGGT+TGG - tig0019276:178640-178659 None:intergenic 35.0%
CAAGCTAACAAGTTAGCAAT+AGG - tig0019276:178644-178663 None:intergenic 35.0%
!! CTATTGCTAACTTGTTAGCT+TGG + tig0019276:178642-178661 Msa1372470:intron 35.0%
! TTGTTAGCTTGGCAAAATCA+TGG + tig0019276:178653-178672 Msa1372470:intron 35.0%
TACCATGTGCTTAAAACATC+TGG + tig0019276:178689-178708 Msa1372470:intron 35.0%
!! TACCAGATGTTTTAAGCACA+TGG - tig0019276:178694-178713 None:intergenic 35.0%
GCAGGAAATAGCAGAAATAT+TGG + tig0019276:178741-178760 Msa1372470:intron 35.0%
CAGTATCATGTTTACCAAAC+TGG - tig0019276:178964-178983 None:intergenic 35.0%
GTAATAATCCCTACATAGGT+GGG - tig0019276:179014-179033 None:intergenic 35.0%
AGTAATAATCCCTACATAGG+TGG - tig0019276:179015-179034 None:intergenic 35.0%
ATGAGAATAGACAATGGATG+AGG - tig0019276:179131-179150 None:intergenic 35.0%
CTGAATGGAAAAGTTCCAAA+AGG + tig0019276:179171-179190 Msa1372470:three_prime_UTR 35.0%
! ATGCATTTGATTCTCCCTTT+TGG - tig0019276:179189-179208 None:intergenic 35.0%
AGGGAGAATCAAATGCATTA+TGG + tig0019276:179191-179210 Msa1372470:three_prime_UTR 35.0%
GAAGCTTCTTGAGAATAGGT+TGG - tig0019276:171670-171689 None:intergenic 40.0%
AGTGGAAGCTTCTTGAGAAT+AGG - tig0019276:171674-171693 None:intergenic 40.0%
TGGTTTAGGAGAAGGAAGAT+TGG - tig0019276:171715-171734 None:intergenic 40.0%
AATGGAAGAAGGGTTTGAGA+AGG - tig0019276:171741-171760 None:intergenic 40.0%
! TGAAGAATCTTCTGGGAAGT+GGG - tig0019276:171776-171795 None:intergenic 40.0%
GTGAAGGTGAAGAATCTTCT+GGG - tig0019276:171783-171802 None:intergenic 40.0%
ATGTTCTTCTTGAGGAGAAG+GGG - tig0019276:171853-171872 None:intergenic 40.0%
CATGTTCTTCTTGAGGAGAA+GGG - tig0019276:171854-171873 None:intergenic 40.0%
TCATGTTCTTCTTGAGGAGA+AGG - tig0019276:171855-171874 None:intergenic 40.0%
CTTGATGTCATCTCTTCAAC+TGG + tig0019276:171879-171898 Msa1372470:CDS 40.0%
GAACCTGCAATTCCCAATTA+CGG + tig0019276:172121-172140 Msa1372470:intron 40.0%
CGAAAATCACACACCGTAAT+TGG - tig0019276:172137-172156 None:intergenic 40.0%
!!! AGTGTTTTGGCAACTGATGA+TGG + tig0019276:172456-172475 Msa1372470:CDS 40.0%
TCATCTTCAACTGTGGTAGT+TGG + tig0019276:172531-172550 Msa1372470:CDS 40.0%
ACTTGCAAGTCATTGATCAC+AGG - tig0019276:172639-172658 None:intergenic 40.0%
GAGGAAGAAGATTCTCAAGT+TGG + tig0019276:172774-172793 Msa1372470:CDS 40.0%
! GTGTTTTCTGATCTGAGTAG+TGG + tig0019276:172849-172868 Msa1372470:CDS 40.0%
TGTTCTGTTTGTCAGGTAGA+AGG + tig0019276:172969-172988 Msa1372470:intron 40.0%
CATCTCTCTACAGTTGACAA+TGG + tig0019276:173009-173028 Msa1372470:CDS 40.0%
AGTTGACAATGGCAATAGTG+TGG + tig0019276:173020-173039 Msa1372470:CDS 40.0%
!! GTATCCACTTCTTTAGAGTC+TGG + tig0019276:173105-173124 Msa1372470:CDS 40.0%
! ACTACCAGACTCTAAAGAAG+TGG - tig0019276:173112-173131 None:intergenic 40.0%
AGTGCAACAGACAATCTTAG+TGG + tig0019276:173198-173217 Msa1372470:CDS 40.0%
! TTGTTCAGACTCTGAAGAAG+TGG - tig0019276:173262-173281 None:intergenic 40.0%
! CTGTACTGACATAAGTGAAC+TGG + tig0019276:173413-173432 Msa1372470:CDS 40.0%
TTGCTCAGACTGTAAAGAAG+TGG - tig0019276:173448-173467 None:intergenic 40.0%
TCTTTACAGTCTGAGCAAGA+TGG + tig0019276:173450-173469 Msa1372470:CDS 40.0%
ATTGCAACAGACAATCTGAC+TGG + tig0019276:173477-173496 Msa1372470:CDS 40.0%
TTGTTCAGACTCTATGGTAG+TGG - tig0019276:173634-173653 None:intergenic 40.0%
ACCATAGAGTCTGAACAAGT+TGG + tig0019276:173636-173655 Msa1372470:CDS 40.0%
! ACCAACTTGTTCAGACTCTA+TGG - tig0019276:173640-173659 None:intergenic 40.0%
CGATGCTGAAATGAGTGATT+TGG + tig0019276:173692-173711 Msa1372470:CDS 40.0%
!! TTCTTCAGACTCTAAGGTAG+TGG - tig0019276:173727-173746 None:intergenic 40.0%
ACCTTAGAGTCTGAAGAAGT+TGG + tig0019276:173729-173748 Msa1372470:CDS 40.0%
ACCAACTTCTTCAGACTCTA+AGG - tig0019276:173733-173752 None:intergenic 40.0%
TTGTTCAGAGTCTGAAGAAG+TGG - tig0019276:173820-173839 None:intergenic 40.0%
GATTCCAAGGAAGTGGATAA+TGG - tig0019276:173906-173925 None:intergenic 40.0%
CAATATCAAGACTGCCAGTT+AGG - tig0019276:173959-173978 None:intergenic 40.0%
! GACTCTAAAGAGAAGGATTC+TGG - tig0019276:173999-174018 None:intergenic 40.0%
! TTGTACGGACTCTAAAGAGA+AGG - tig0019276:174006-174025 None:intergenic 40.0%
AGCGAAACAAATGATATGGC+TGG + tig0019276:174035-174054 Msa1372470:CDS 40.0%
TTATAGTGCAACAGACGATC+TGG + tig0019276:174124-174143 Msa1372470:CDS 40.0%
! GACTCTAAAGAAGTCGACAT+TGG - tig0019276:174185-174204 None:intergenic 40.0%
! TTGTTTGGACTCTAAGGAAG+GGG - tig0019276:174285-174304 None:intergenic 40.0%
! CTTGTTTGGACTCTAAGGAA+GGG - tig0019276:174286-174305 None:intergenic 40.0%
! ACTTGTTTGGACTCTAAGGA+AGG - tig0019276:174287-174306 None:intergenic 40.0%
TTACAGTGCAACAGACAATC+TGG + tig0019276:173194-173213 Msa1372470:CDS 40.0%
! CTGACTGGTAATGTTGATGA+CGG + tig0019276:174419-174438 Msa1372470:CDS 40.0%
GGTTCAGAGTCTAAAGAAGT+CGG - tig0019276:174470-174489 None:intergenic 40.0%
GAAACAATCCACCAGATTGA+TGG + tig0019276:174503-174522 Msa1372470:CDS 40.0%
TGTTGATGCTGAGTTTAGTG+AGG + tig0019276:174526-174545 Msa1372470:CDS 40.0%
GCCAATATCCACTTCTTTAG+AGG + tig0019276:174553-174572 Msa1372470:CDS 40.0%
! GCCTCTAAAGAAGTGGATAT+TGG - tig0019276:174557-174576 None:intergenic 40.0%
! TTGTTCAGCCTCTAAAGAAG+TGG - tig0019276:174564-174583 None:intergenic 40.0%
TGATACCGAGTTAAGTGAAC+CGG + tig0019276:174622-174641 Msa1372470:CDS 40.0%
!! GGTTCTAAGGAAGTGGATAA+TGG - tig0019276:174650-174669 None:intergenic 40.0%
!! TTGTTCAGGTTCTAAGGAAG+TGG - tig0019276:174657-174676 None:intergenic 40.0%
TTATAGCCCTCCATAAGGAA+AGG - tig0019276:174852-174871 None:intergenic 40.0%
GTGAATTATAGCCCTCCATA+AGG - tig0019276:174857-174876 None:intergenic 40.0%
!! GCTCATCAAACCCTTTTTCA+TGG + tig0019276:175405-175424 Msa1372470:intron 40.0%
!!! ACGGAGCTTTTTCTAGTTTC+TGG + tig0019276:175476-175495 Msa1372470:CDS 40.0%
AATCCCTATTAATGCCAGGA+CGG - tig0019276:175533-175552 None:intergenic 40.0%
! ATTTTGCTAGGGCATAATGC+AGG + tig0019276:175644-175663 Msa1372470:intron 40.0%
! TTTTGCTAGGGCATAATGCA+GGG + tig0019276:175645-175664 Msa1372470:intron 40.0%
AGTGTATATCAGGGAACTCA+TGG + tig0019276:176496-176515 Msa1372470:CDS 40.0%
GTGTATATCAGGGAACTCAT+GGG + tig0019276:176497-176516 Msa1372470:CDS 40.0%
CTTCTGATAAGAACTTCTGC+AGG - tig0019276:176572-176591 None:intergenic 40.0%
!!! GGTTGCTTATTTTGATGGAC+TGG + tig0019276:176631-176650 Msa1372470:CDS 40.0%
TTCATTGTGTTGGGTGTGAA+GGG - tig0019276:177120-177139 None:intergenic 40.0%
TCCAACACCTTCATTGTGTT+GGG - tig0019276:177129-177148 None:intergenic 40.0%
ACAACCCAAATGCAGCAATT+AGG + tig0019276:177164-177183 Msa1372470:intron 40.0%
GCTTATACTAGATCAGCTGT+TGG - tig0019276:177279-177298 None:intergenic 40.0%
AGGGCAGTTCTTACATTACA+CGG - tig0019276:177354-177373 None:intergenic 40.0%
TGTAATGTAAGAACTGCCCT+TGG + tig0019276:177354-177373 Msa1372470:intron 40.0%
AGAACTGCCCTTGGTTTATA+AGG + tig0019276:177363-177382 Msa1372470:intron 40.0%
TTCGGAAGGAAAAAGCAAAG+AGG + tig0019276:177457-177476 Msa1372470:intron 40.0%
TGACGTGCAAAACAATGGTT+TGG - tig0019276:177483-177502 None:intergenic 40.0%
CTTCATGACGTGCAAAACAA+TGG - tig0019276:177488-177507 None:intergenic 40.0%
TGTGCAGTTAAATAAGCTGC+TGG + tig0019276:177541-177560 Msa1372470:intron 40.0%
AACAAAATCTATGTCTGCCG+GGG - tig0019276:177583-177602 None:intergenic 40.0%
GAGGCTCAAAATTATAGAGG+TGG + tig0019276:177924-177943 Msa1372470:intron 40.0%
! AAATTATAGAGGTGGCTTGG+AGG + tig0019276:177932-177951 Msa1372470:intron 40.0%
! GATGGAATTTGAAACACGTG+TGG - tig0019276:178330-178349 None:intergenic 40.0%
ATTGGTAAGGTTGCTACCTT+GGG - tig0019276:178491-178510 None:intergenic 40.0%
TACATAGGTGGGAAGTTCAT+TGG - tig0019276:179003-179022 None:intergenic 40.0%
AATGAACTTCCCACCTATGT+AGG + tig0019276:179002-179021 Msa1372470:three_prime_UTR 40.0%
ATGAACTTCCCACCTATGTA+GGG + tig0019276:179003-179022 Msa1372470:three_prime_UTR 40.0%
AGAATAGACAATGGATGAGG+TGG - tig0019276:179128-179147 None:intergenic 40.0%
CAAGAAGCTTCCACTGTCTA+TGG + tig0019276:171679-171698 Msa1372470:CDS 45.0%
AGCATGGAAACCATAGACAG+TGG - tig0019276:171692-171711 None:intergenic 45.0%
! GTTTGAGAAGGTGGTGGTTT+AGG - tig0019276:171729-171748 None:intergenic 45.0%
AGTGGGGTTGGAGTAGAAAA+TGG - tig0019276:171759-171778 None:intergenic 45.0%
! GAAGAATCTTCTGGGAAGTG+GGG - tig0019276:171775-171794 None:intergenic 45.0%
! GTGAAGAATCTTCTGGGAAG+TGG - tig0019276:171777-171796 None:intergenic 45.0%
GGTGAAGGTGAAGAATCTTC+TGG - tig0019276:171784-171803 None:intergenic 45.0%
! AATTGAGAAGTGTAGGGGTG+TGG - tig0019276:171815-171834 None:intergenic 45.0%
ACACCGTAATTGGGAATTGC+AGG - tig0019276:172127-172146 None:intergenic 45.0%
! GTTTGCTTTGACAGAGCATC+CGG + tig0019276:172323-172342 Msa1372470:intron 45.0%
AAACAGAAACTCGTGCCTGA+GGG + tig0019276:172411-172430 Msa1372470:CDS 45.0%
TCTTCATCAACAACACCCTC+AGG - tig0019276:172429-172448 None:intergenic 45.0%
!! GAGGGTGTTGTTGATGAAGA+AGG + tig0019276:172429-172448 Msa1372470:CDS 45.0%
! TCGTTTTCACTCTCGAGAAG+CGG - tig0019276:172576-172595 None:intergenic 45.0%
TCTTCTTCCTCAGACACACT+CGG - tig0019276:172765-172784 None:intergenic 45.0%
GAAAACACATCTGACTCTGC+TGG - tig0019276:172837-172856 None:intergenic 45.0%
TCTGAGTAGTGGTCCTTCTT+TGG + tig0019276:172860-172879 Msa1372470:CDS 45.0%
AGTGTGGATAGAGCAGCAAA+CGG + tig0019276:173036-173055 Msa1372470:CDS 45.0%
!! TGCTGCTGACTTGACTGAAT+TGG + tig0019276:173077-173096 Msa1372470:CDS 45.0%
!! TGCTGACTTGACTGAATTGG+TGG + tig0019276:173080-173099 Msa1372470:CDS 45.0%
TGATGCCGACAGAAGTGAAT+TGG + tig0019276:173134-173153 Msa1372470:CDS 45.0%
! TTGCTCGGTCTCTAAAGAAG+TGG - tig0019276:173169-173188 None:intergenic 45.0%
! TCTTTAGAGACCGAGCAAGA+TGG + tig0019276:173171-173190 Msa1372470:CDS 45.0%
TGCACTGTAACCATCTTGCT+CGG - tig0019276:173184-173203 None:intergenic 45.0%
!!! TGGCACCGATTCACTTGTTT+TGG - tig0019276:173328-173347 None:intergenic 45.0%
TCTTCAGAGTCAGAGCAAGT+TGG + tig0019276:173357-173376 Msa1372470:CDS 45.0%
!! GAGTCAGAGCAAGTTGGTTA+TGG + tig0019276:173363-173382 Msa1372470:CDS 45.0%
TGACATAACTGAATCTGCGC+TGG + tig0019276:173512-173531 Msa1372470:CDS 45.0%
AGTGCAACAAGCAATCTGAC+TGG + tig0019276:173570-173589 Msa1372470:CDS 45.0%
!! GACTCTATGGTAGTGGATAC+TGG - tig0019276:173627-173646 None:intergenic 45.0%
!! GACTCTAAGGTAGTGGATAC+TGG - tig0019276:173720-173739 None:intergenic 45.0%
GAGTCTGAAGAAGTGGATAC+TGG - tig0019276:173813-173832 None:intergenic 45.0%
AGAGCAACAGACAATGAGAC+TGG + tig0019276:173849-173868 Msa1372470:CDS 45.0%
!! AGTGTCGATCCTGACATGAA+TGG + tig0019276:173873-173892 Msa1372470:CDS 45.0%
! TGTGCCATTATCCACTTCCT+TGG + tig0019276:173899-173918 Msa1372470:CDS 45.0%
TTGTTCCGATTCCAAGGAAG+TGG - tig0019276:173913-173932 None:intergenic 45.0%
!! ATCGACTTGTTCCGATTCCA+AGG - tig0019276:173919-173938 None:intergenic 45.0%
AGTGCAACAGACAACCTAAC+TGG + tig0019276:173942-173961 Msa1372470:CDS 45.0%
CGTCATCAACATTACCAGTC+AGG - tig0019276:174421-174440 None:intergenic 45.0%
TGACGGCATAACAAGTGAGT+TGG + tig0019276:174436-174455 Msa1372470:CDS 45.0%
GAGTCTAAAGAAGTCGGTAC+TGG - tig0019276:174464-174483 None:intergenic 45.0%
CATCAACACCATCAATCTGG+TGG - tig0019276:174514-174533 None:intergenic 45.0%
CAGCATCAACACCATCAATC+TGG - tig0019276:174517-174536 None:intergenic 45.0%
! AAGGAAGTGGATAATGGCAC+CGG - tig0019276:173900-173919 None:intergenic 45.0%
AGTACAACAGGCAACTTGAC+AGG + tig0019276:174686-174705 Msa1372470:CDS 45.0%
! GCACCGGTATCTACTTCTTT+GGG + tig0019276:174737-174756 Msa1372470:CDS 45.0%
CACCGGTATCTACTTCTTTG+GGG + tig0019276:174738-174757 Msa1372470:CDS 45.0%
GACCCCAAAGAAGTAGATAC+CGG - tig0019276:174743-174762 None:intergenic 45.0%
TGAAAGAAATCGCCATGTCG+TGG + tig0019276:174772-174791 Msa1372470:CDS 45.0%
! TTTGGTTCCATCCTCAGACT+TGG + tig0019276:174960-174979 Msa1372470:CDS 45.0%
TTGTTTGCCAAGTCTGAGGA+TGG - tig0019276:174970-174989 None:intergenic 45.0%
TCAGTTCAGATGGCTAGTGA+TGG + tig0019276:175060-175079 Msa1372470:CDS 45.0%
CAGTTCAGATGGCTAGTGAT+GGG + tig0019276:175061-175080 Msa1372470:CDS 45.0%
ACGTTTGCTCTTTCTGCACA+CGG + tig0019276:175119-175138 Msa1372470:intron 45.0%
ACGGTCTTCAGTATGTGGTT+AGG + tig0019276:175138-175157 Msa1372470:intron 45.0%
CCAGCAAGAGCCATGAAAAA+GGG - tig0019276:175418-175437 None:intergenic 45.0%
ACCAGCAAGAGCCATGAAAA+AGG - tig0019276:175419-175438 None:intergenic 45.0%
GTACCGTCCTGGCATTAATA+GGG + tig0019276:175527-175546 Msa1372470:intron 45.0%
!! CTAGGAGTACTTGTGTGTCT+TGG + tig0019276:175904-175923 Msa1372470:intron 45.0%
AGCCACAACTAGCCAGTTTA+GGG - tig0019276:176183-176202 None:intergenic 45.0%
! TCCAGGGTCATCTTCTGTTT+TGG + tig0019276:176610-176629 Msa1372470:CDS 45.0%
ACCAAAACAGAAGATGACCC+TGG - tig0019276:176614-176633 None:intergenic 45.0%
GCCATATCTCGAGACAATGT+GGG + tig0019276:177084-177103 Msa1372470:intron 45.0%
TCCCACATTGTCTCGAGATA+TGG - tig0019276:177088-177107 None:intergenic 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - tig0019276:177121-177140 None:intergenic 45.0%
CTTCACACCCAACACAATGA+AGG + tig0019276:177119-177138 Msa1372470:intron 45.0%
! ACCCAACACAATGAAGGTGT+TGG + tig0019276:177125-177144 Msa1372470:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG - tig0019276:177130-177149 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + tig0019276:177128-177147 Msa1372470:intron 45.0%
ACCCAAATGCAGCAATTAGG+TGG + tig0019276:177167-177186 Msa1372470:intron 45.0%
GCCACCTAATTGCTGCATTT+GGG - tig0019276:177171-177190 None:intergenic 45.0%
AGCCACCTAATTGCTGCATT+TGG - tig0019276:177172-177191 None:intergenic 45.0%
AATGCAGCAATTAGGTGGCT+AGG + tig0019276:177172-177191 Msa1372470:intron 45.0%
ATGCAGCAATTAGGTGGCTA+GGG + tig0019276:177173-177192 Msa1372470:intron 45.0%
GTCAACACTCCAAGCTCAAT+GGG - tig0019276:177244-177263 None:intergenic 45.0%
GCAGTTCTTACATTACACGG+TGG - tig0019276:177351-177370 None:intergenic 45.0%
GTGTCCCATTAGTTAATCCC+CGG + tig0019276:177563-177582 Msa1372470:intron 45.0%
TCTGCCGGGGATTAACTAAT+GGG - tig0019276:177570-177589 None:intergenic 45.0%
CGACCACTCAGAAATCATTG+AGG + tig0019276:177825-177844 Msa1372470:CDS 45.0%
GAGAATCAACCTCAGGTTTC+AGG - tig0019276:178176-178195 None:intergenic 45.0%
TAAAGGCGAGAATCAACCTC+AGG - tig0019276:178183-178202 None:intergenic 45.0%
! AGTAGTCTTACCACCACAAG+TGG + tig0019276:178425-178444 Msa1372470:intron 45.0%
CATTGGTAAGGTTGCTACCT+TGG - tig0019276:178492-178511 None:intergenic 45.0%
! AGAGCTTTGACGCATTGGTA+AGG - tig0019276:178504-178523 None:intergenic 45.0%
! AAGGAAGAGCTTTGACGCAT+TGG - tig0019276:178509-178528 None:intergenic 45.0%
AGCAGAAATATTGGCGACGA+CGG + tig0019276:178750-178769 Msa1372470:CDS 45.0%
AGATCCACTAGAAGTCCCTT+TGG + tig0019276:178793-178812 Msa1372470:CDS 45.0%
ATCACCAAAGGGACTTCTAG+TGG - tig0019276:178800-178819 None:intergenic 45.0%
! TTAGGCTATGTGGGTTATGC+AGG + tig0019276:178832-178851 Msa1372470:CDS 45.0%
ACCTGCACATACAACCAGTT+TGG + tig0019276:178947-178966 Msa1372470:three_prime_UTR 45.0%
ACCAAACTGGTTGTATGTGC+AGG - tig0019276:178951-178970 None:intergenic 45.0%
!! TTAAAAAATAAATAATAGAA+TGG + tig0019276:179079-179098 Msa1372470:three_prime_UTR 5.0%
GGAGAAGGAAGATTGGAGCA+TGG - tig0019276:171708-171727 None:intergenic 50.0%
! GAAGGTGGTGGTTTAGGAGA+AGG - tig0019276:171723-171742 None:intergenic 50.0%
AGAAGGGTTTGAGAAGGTGG+TGG - tig0019276:171735-171754 None:intergenic 50.0%
GGAAGAAGGGTTTGAGAAGG+TGG - tig0019276:171738-171757 None:intergenic 50.0%
! AATCTTCTGGGAAGTGGGGT+TGG - tig0019276:171771-171790 None:intergenic 50.0%
CAAACAGAAACTCGTGCCTG+AGG + tig0019276:172410-172429 Msa1372470:CDS 50.0%
! TTTTCACTCTCGAGAAGCGG+AGG - tig0019276:172573-172592 None:intergenic 50.0%
ATCACAGGTGTCTCACTCTC+AGG - tig0019276:172624-172643 None:intergenic 50.0%
TGTTGTTCCGAGTGTGTCTG+AGG + tig0019276:172755-172774 Msa1372470:CDS 50.0%
! GACTCTGAAGAAGTGGACTC+TGG - tig0019276:173255-173274 None:intergenic 50.0%
GGTGCAACAGACAATGTGAC+TGG + tig0019276:173384-173403 Msa1372470:CDS 50.0%
GGCACAACTCCATTCATGTC+AGG - tig0019276:173885-173904 None:intergenic 50.0%
AGTGCAACAGACAACCTGAC+TGG + tig0019276:174221-174240 Msa1372470:CDS 50.0%
AGTGCAACAGACAATCTGGC+TGG + tig0019276:174314-174333 Msa1372470:CDS 50.0%
!! TGGCACCGGTTCACTTAACT+CGG - tig0019276:174630-174649 None:intergenic 50.0%
ACAACAGGCAACTTGACAGG+CGG + tig0019276:174689-174708 Msa1372470:CDS 50.0%
TGACTTATGTGAGTCGGCAC+CGG + tig0019276:174721-174740 Msa1372470:CDS 50.0%
!! GGCACCGGTATCTACTTCTT+TGG + tig0019276:174736-174755 Msa1372470:CDS 50.0%
CAACTGAGTCATCCACGACA+TGG - tig0019276:174787-174806 None:intergenic 50.0%
TGCACACGGTCTTCAGTATG+TGG + tig0019276:175133-175152 Msa1372470:intron 50.0%
!! CCCTTTTTCATGGCTCTTGC+TGG + tig0019276:175415-175434 Msa1372470:intron 50.0%
GGTACCGTCCTGGCATTAAT+AGG + tig0019276:175526-175545 Msa1372470:intron 50.0%
!! TCTTGGTTTGTCCTCAGCTG+TGG + tig0019276:175921-175940 Msa1372470:intron 50.0%
!! CTTGGTTTGTCCTCAGCTGT+GGG + tig0019276:175922-175941 Msa1372470:intron 50.0%
GATGCTAAATCCCACAGCTG+AGG - tig0019276:175935-175954 None:intergenic 50.0%
! TCCCCTAAACTGGCTAGTTG+TGG + tig0019276:176178-176197 Msa1372470:CDS 50.0%
GCCACAACTAGCCAGTTTAG+GGG - tig0019276:176182-176201 None:intergenic 50.0%
CAGCCACAACTAGCCAGTTT+AGG - tig0019276:176184-176203 None:intergenic 50.0%
! AACTGGCTAGTTGTGGCTGA+TGG + tig0019276:176185-176204 Msa1372470:CDS 50.0%
CTAGTTGTGGCTGATGGAGT+TGG + tig0019276:176191-176210 Msa1372470:CDS 50.0%
GTTGGTCAGTGGTCACTTGA+AGG + tig0019276:176209-176228 Msa1372470:CDS 50.0%
ACCGCTGAAACACATTCTCC+AGG + tig0019276:176593-176612 Msa1372470:CDS 50.0%
CCCTGGAGAATGTGTTTCAG+CGG - tig0019276:176597-176616 None:intergenic 50.0%
CCGCTGAAACACATTCTCCA+GGG + tig0019276:176594-176613 Msa1372470:CDS 50.0%
GGCCATATCTCGAGACAATG+TGG + tig0019276:177083-177102 Msa1372470:intron 50.0%
TTGTGTTGGGTGTGAAGGGT+AGG - tig0019276:177116-177135 None:intergenic 50.0%
TGCAGCAATTAGGTGGCTAG+GGG + tig0019276:177174-177193 Msa1372470:intron 50.0%
TATCCAACCCTCTCACATCG+AGG + tig0019276:177218-177237 Msa1372470:intron 50.0%
CGTCAACACTCCAAGCTCAA+TGG - tig0019276:177245-177264 None:intergenic 50.0%
GTCTGCCGGGGATTAACTAA+TGG - tig0019276:177571-177590 None:intergenic 50.0%
TGTTCCCAACGTTAGCTGCA+TGG - tig0019276:177711-177730 None:intergenic 50.0%
! ACAAGCTAGCCTGAAACCTG+AGG + tig0019276:178164-178183 Msa1372470:CDS 50.0%
TCTTACCACCACAAGTGGAG+AGG + tig0019276:178430-178449 Msa1372470:intron 50.0%
AAAAGCCTCTCCACTTGTGG+TGG - tig0019276:178438-178457 None:intergenic 50.0%
CACAAAAGCCTCTCCACTTG+TGG - tig0019276:178441-178460 None:intergenic 50.0%
!! AGCTCAGGCTTTAGGCTATG+TGG + tig0019276:178822-178841 Msa1372470:CDS 50.0%
!! GCTCAGGCTTTAGGCTATGT+GGG + tig0019276:178823-178842 Msa1372470:CDS 50.0%
GGTGTGGTGAGTAGTGGTGA+AGG - tig0019276:171799-171818 None:intergenic 55.0%
! TGTAGGGGTGTGGTGAGTAG+TGG - tig0019276:171805-171824 None:intergenic 55.0%
! GCTTTGACAGAGCATCCGGA+TGG + tig0019276:172327-172346 Msa1372470:intron 55.0%
AGTGCAACAGACGATCTGGC+TGG + tig0019276:174128-174147 Msa1372470:CDS 55.0%
GGTGCAACTGACAACCTGAC+TGG + tig0019276:174404-174423 Msa1372470:CDS 55.0%
CGGTATCAACAACGGCAGTC+AGG - tig0019276:174610-174629 None:intergenic 55.0%
TTGCTTGCCTCATCCCTCTG+AGG + tig0019276:175505-175524 Msa1372470:CDS 55.0%
! TGGCTGATGGAGTTGGTCAG+TGG + tig0019276:176198-176217 Msa1372470:CDS 55.0%
GCAATTAGGTGGCTAGGGGA+AGG + tig0019276:177178-177197 Msa1372470:intron 55.0%
GGGGAAGGCCTCAATTAGAG+TGG + tig0019276:177193-177212 Msa1372470:intron 55.0%
CAATGGGCCTCGATGTGAGA+GGG - tig0019276:177228-177247 None:intergenic 55.0%
TCAATGGGCCTCGATGTGAG+AGG - tig0019276:177229-177248 None:intergenic 55.0%
ACATCGAGGCCCATTGAGCT+TGG + tig0019276:177232-177251 Msa1372470:intron 55.0%
CCCAACGTTAGCTGCATGGA+GGG - tig0019276:177707-177726 None:intergenic 55.0%
CCCTCCATGCAGCTAACGTT+GGG + tig0019276:177704-177723 Msa1372470:CDS 55.0%
TCCCAACGTTAGCTGCATGG+AGG - tig0019276:177708-177727 None:intergenic 55.0%
GCAGCTAACGTTGGGAACAC+TGG + tig0019276:177712-177731 Msa1372470:CDS 55.0%
! AAAGTGTGGCCTTGAGCGCT+AGG + tig0019276:178367-178386 Msa1372470:intron 55.0%
CTCTTCAGACCCCACTTGGT+GGG - tig0019276:178395-178414 None:intergenic 55.0%
CACCAAGTGGGGTCTGAAGA+GGG + tig0019276:178394-178413 Msa1372470:intron 55.0%
TACCCTCTTCAGACCCCACT+TGG - tig0019276:178399-178418 None:intergenic 55.0%
CATGCGATCTCTTGGTCCCA+AGG + tig0019276:178472-178491 Msa1372470:intron 55.0%
!! TCCCTTTGGTGATGCAGCTC+AGG + tig0019276:178807-178826 Msa1372470:CDS 55.0%
GCCTGAGCTGCATCACCAAA+GGG - tig0019276:178811-178830 None:intergenic 55.0%
AGCCTGAGCTGCATCACCAA+AGG - tig0019276:178812-178831 None:intergenic 55.0%
GGTGATGCAGCTCAGGCTTT+AGG + tig0019276:178814-178833 Msa1372470:CDS 55.0%
! GGCTATGTGGGTTATGCAGG+TGG + tig0019276:178835-178854 Msa1372470:CDS 55.0%
AGAGCAGCAAACGGCGTAGC+AGG + tig0019276:173045-173064 Msa1372470:CDS 60.0%
TGGCATCAGCACTGCCAGTC+AGG - tig0019276:174238-174257 None:intergenic 60.0%
GACGGTACCTCAGAGGGATG+AGG - tig0019276:175515-175534 None:intergenic 60.0%
!! ATCCCTCTGAGGTACCGTCC+TGG + tig0019276:175516-175535 Msa1372470:intron 60.0%
TGCCAGGACGGTACCTCAGA+GGG - tig0019276:175521-175540 None:intergenic 60.0%
ATGCCAGGACGGTACCTCAG+AGG - tig0019276:175522-175541 None:intergenic 60.0%
GCCCTCCATGCAGCTAACGT+TGG + tig0019276:177703-177722 Msa1372470:CDS 60.0%
CCTCTTCAGACCCCACTTGG+TGG - tig0019276:178396-178415 None:intergenic 60.0%
CCACCAAGTGGGGTCTGAAG+AGG + tig0019276:178393-178412 Msa1372470:intron 60.0%
ATTGGCGACGACGGCACAAG+AGG + tig0019276:178759-178778 Msa1372470:CDS 60.0%
GCAGCAAACGGCGTAGCAGG+TGG + tig0019276:173048-173067 Msa1372470:CDS 65.0%
GGGCCTCGATGTGAGAGGGT+TGG - tig0019276:177224-177243 None:intergenic 65.0%
TGGTGGGAGCCTAGCGCTCA+AGG - tig0019276:178379-178398 None:intergenic 65.0%
AGCGCTAGGCTCCCACCAAG+TGG + tig0019276:178381-178400 Msa1372470:intron 65.0%
GCGCTAGGCTCCCACCAAGT+GGG + tig0019276:178382-178401 Msa1372470:intron 65.0%
CGCTAGGCTCCCACCAAGTG+GGG + tig0019276:178383-178402 Msa1372470:intron 65.0%
GCGACGACGGCACAAGAGGT+TGG + tig0019276:178763-178782 Msa1372470:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0019276 gene 171533 179269 171533 ID=Msa1372470;Name=Msa1372470
tig0019276 mRNA 171533 179269 171533 ID=Msa1372470-mRNA-1;Parent=Msa1372470;Name=Msa1372470-mRNA-1;_AED=0.06;_eAED=0.06;_QI=130|0.88|0.8|1|1|1|10|363|1187
tig0019276 exon 171533 171900 171533 ID=Msa1372470-mRNA-1:exon:2679;Parent=Msa1372470-mRNA-1
tig0019276 exon 172337 172923 172337 ID=Msa1372470-mRNA-1:exon:2680;Parent=Msa1372470-mRNA-1
tig0019276 exon 172988 174835 172988 ID=Msa1372470-mRNA-1:exon:2681;Parent=Msa1372470-mRNA-1
tig0019276 exon 174952 175082 174952 ID=Msa1372470-mRNA-1:exon:2682;Parent=Msa1372470-mRNA-1
tig0019276 exon 175460 175526 175460 ID=Msa1372470-mRNA-1:exon:2683;Parent=Msa1372470-mRNA-1
tig0019276 exon 176143 176230 176143 ID=Msa1372470-mRNA-1:exon:2684;Parent=Msa1372470-mRNA-1
tig0019276 exon 176483 176652 176483 ID=Msa1372470-mRNA-1:exon:2685;Parent=Msa1372470-mRNA-1
tig0019276 exon 177703 177846 177703 ID=Msa1372470-mRNA-1:exon:2686;Parent=Msa1372470-mRNA-1
tig0019276 exon 178057 178185 178057 ID=Msa1372470-mRNA-1:exon:2687;Parent=Msa1372470-mRNA-1
tig0019276 exon 178745 179269 178745 ID=Msa1372470-mRNA-1:exon:2688;Parent=Msa1372470-mRNA-1
tig0019276 five_prime_UTR 171533 171662 171533 ID=Msa1372470-mRNA-1:five_prime_utr;Parent=Msa1372470-mRNA-1
tig0019276 CDS 171663 171900 171663 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 172337 172923 172337 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 172988 174835 172988 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 174952 175082 174952 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 175460 175526 175460 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 176143 176230 176143 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 176483 176652 176483 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 177703 177846 177703 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 178057 178185 178057 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 CDS 178745 178906 178745 ID=Msa1372470-mRNA-1:cds;Parent=Msa1372470-mRNA-1
tig0019276 three_prime_UTR 178907 179269 178907 ID=Msa1372470-mRNA-1:three_prime_utr;Parent=Msa1372470-mRNA-1
Gene Sequence

>Msa1372470

ATGTCCAACCTATTCTCAAGAAGCTTCCACTGTCTATGGTTTCCATGCTCCAATCTTCCTTCTCCTAAACCACCACCTTCTCAAACCCTTCTTCCATTTTCTACTCCAACCCCACTTCCCAGAAGATTCTTCACCTTCACCACTACTCACCACACCCCTACACTTCTCAATTCAACTTCATCTTCAACCCCTTCTCCTCAAGAAGAACATGAAGAACTTGATGTCATCTCTTCAACTGAGCATCCGGATGGAAGTTTTTTGTTCACATTTGGCAATGCTAGCGAGATTAGAGAAAAGATAGCCGAGTTAAACAAACAGAAACTCGTGCCTGAGGGTGTTGTTGATGAAGAAGGTGTTAGTGTTTTGGCAACTGATGATGGTGTTGAACAAATGAGCAATGAGGATGATAGTAACTTAAGGGGAGAAATTGAATCATCTTCAACTGTGGTAGTTGGTGTTGCTGATCAAAATCCTCCGCTTCTCGAGAGTGAAAACGAAAGCAGTGTTGTTCTTGATAGCGAACCTGAGAGTGAGACACCTGTGATCAATGACTTGCAAGTAATTGATAAACATTTTAAGTTGGATTCAGTTGATGATAGTGATGATCAACATGGAGTTTGTAGTGAAGATGTTGCTGCTGCTGCTGTTGAGCATAATGTTGTTCCGAGTGTGTCTGAGGAAGAAGATTCTCAAGTTGGTAGTCACAAAGAAGAAGTTGTCGTTTCAACAGTTTCTCCAGCAGAGTCAGATGTGTTTTCTGATCTGAGTAGTGGTCCTTCTTTGGAAACTGAAGAGAAAGAAGAAGGTGATATTTTGACTTATGTGAAGGCTAACATTGAAGTTGCTCATCTCTCTACAGTTGACAATGGCAATAGTGTGGATAGAGCAGCAAACGGCGTAGCAGGTGGTATTGATGCTGCTGACTTGACTGAATTGGTGGAAGTATCCACTTCTTTAGAGTCTGGTAGTGTTGATGCCGACAGAAGTGAATTGGAACAAGTATCCACTTCTTTAGAGACCGAGCAAGATGGTTACAGTGCAACAGACAATCTTAGTGGTAGTGTTGATGTTGACATATCTGAATCGGTACCAGAGTCCACTTCTTCAGAGTCTGAACAAGTTGATTGTAATGCAAGAGAAAATCTGACTGGCAGCATTGATGCCAAAACAAGTGAATCGGTGCCAGTATCAATTTCTTCAGAGTCAGAGCAAGTTGGTTATGGTGCAACAGACAATGTGACTGGTAGTGTCTGTACTGACATAAGTGAACTGGAACATGTATCCACTTCTTTACAGTCTGAGCAAGATGGTTATATTGCAACAGACAATCTGACTGGCAGTGTTGAGTCTGACATAACTGAATCTGCGCTGGTATCCACTTTTTCAGAGTCTGAACAAGATGGTTTTAGTGCAACAAGCAATCTGACTGGCAGTGTCGATGTTGACATGAGTGAATCAATGCCAGTATCCACTACCATAGAGTCTGAACAAGTTGGTTATATTGAAACAGACAATCTGAGTGGCAGTGTCGATGCTGAAATGAGTGATTTGGTGCCAGTATCCACTACCTTAGAGTCTGAAGAAGTTGGTTACAGTGAAACAGACAATCTTACTGGCAGTGTTGATGCTGACAAAACTGAATTTGTGCCAGTATCCACTTCTTCAGACTCTGAACAAGTTGATTATAGAGCAACAGACAATGAGACTGGCAGTGTCGATCCTGACATGAATGGAGTTGTGCCATTATCCACTTCCTTGGAATCGGAACAAGTCGATTATAGTGCAACAGACAACCTAACTGGCAGTCTTGATATTGCAAGAAGTGAATTGGTGCCAGAATCCTTCTCTTTAGAGTCCGTACAAGCTAATGATAGCGAAACAAATGATATGGCTGGCTGTGTCGATGCTGAAAATAGTGAATTAGTGTCAATATCCACATCTTTAGAGTCCAAACAAGTTGATTATAGTGCAACAGACGATCTGGCTGGCAGTGTTGATACTAATGATAGTGAATTGGTGCCAATGTCGACTTCTTTAGAGTCTGAGCAAGTTGATTATAGTGCAACAGACAACCTGACTGGCAGTGCTGATGCCACAATAAATGAATTGGTGCAAGTATCCCCTTCCTTAGAGTCCAAACAAGTTGATTACAGTGCAACAGACAATCTGGCTGGAAGTGTTGATGCTGACAATATTGATTTGGTGCCAATATCTACTTTAGAGTCTAAACAAGTTGATTATGGTGCAACTGACAACCTGACTGGTAATGTTGATGACGGCATAACAAGTGAGTTGGTGCCAGTACCGACTTCTTTAGACTCTGAACCGTCTGTTAATAGAGAAACAATCCACCAGATTGATGGTGTTGATGCTGAGTTTAGTGAGGCCGTGCCAATATCCACTTCTTTAGAGGCTGAACAAGTTGATTATAGTGCAACGGACAACCTGACTGCCGTTGTTGATACCGAGTTAAGTGAACCGGTGCCATTATCCACTTCCTTAGAACCTGAACAAGCTAATTATAGTACAACAGGCAACTTGACAGGCGGTGTTGATACTGACTTATGTGAGTCGGCACCGGTATCTACTTCTTTGGGGTCTGACGATGATGAAAGAAATCGCCATGTCGTGGATGACTCAGTTGATGCAAGTGAAATGAAAAAGTCAGCATTGTTGGATGATTTGGTTCCATCCTCAGACTTGGCAAACAAAATAGATGTTGGAAATATTGAAAGAAGTGATTATGAAAATCCAATACTTAATACGGTACCAGAGATACATTCAGTTCAGATGGCTAGTGATGGGGAAAATATTTCAAGAACGGAGCTTTTTCTAGTTTCTGGTGCTGCTTGCTTGCCTCATCCCTCTGAGGAACTGACTAGTCGAGAAGATGCTTATATTATTTCTCCCCTAAACTGGCTAGTTGTGGCTGATGGAGTTGGTCAGTGGTCACTTGAAGGGAGTAATACTGGAGTGTATATCAGGGAACTCATGGGAAATTGTGAAGATATCGTGTCAAATTGTGATAACATTTCAACGATAAAACCTGCAGAAGTTCTTATCAGAAGCACCGCTGAAACACATTCTCCAGGGTCATCTTCTGTTTTGGTTGCTTATTTTGATGGACTGGCCCTCCATGCAGCTAACGTTGGGAACACTGGATTTATCATTATAAGACATGGCTCCATCTTCAAAACATCAAATGCCATGTTTCATGAATTCAGTTTTCCGATACATATAGTTAAAGGCGACGACCACTCAGAAATCATTGAGGAGTACAAGATCGATCTAAACGATGGTGATGTGATTGTATTTGGCACAAATGGTCTTTTTGACAATCTTTATGAGAAAGAAATAGCATCAACTGTATCAAAATCACTACAAGCTAGCCTGAAACCTGAGGAAATAGCAGAAATATTGGCGACGACGGCACAAGAGGTTGGAAGATCAAGATCCACTAGAAGTCCCTTTGGTGATGCAGCTCAGGCTTTAGGCTATGTGGGTTATGCAGGTGGCAAGCTTGATGATGTAACTGTTATAGTGTCATTGGTTCAAACTACATAG
Protein sequence

>Msa1372470

MSNLFSRSFHCLWFPCSNLPSPKPPPSQTLLPFSTPTPLPRRFFTFTTTHHTPTLLNSTSSSTPSPQEEHEELDVISSTEHPDGSFLFTFGNASEIREKIAELNKQKLVPEGVVDEEGVSVLATDDGVEQMSNEDDSNLRGEIESSSTVVVGVADQNPPLLESENESSVVLDSEPESETPVINDLQVIDKHFKLDSVDDSDDQHGVCSEDVAAAAVEHNVVPSVSEEEDSQVGSHKEEVVVSTVSPAESDVFSDLSSGPSLETEEKEEGDILTYVKANIEVAHLSTVDNGNSVDRAANGVAGGIDAADLTELVEVSTSLESGSVDADRSELEQVSTSLETEQDGYSATDNLSGSVDVDISESVPESTSSESEQVDCNARENLTGSIDAKTSESVPVSISSESEQVGYGATDNVTGSVCTDISELEHVSTSLQSEQDGYIATDNLTGSVESDITESALVSTFSESEQDGFSATSNLTGSVDVDMSESMPVSTTIESEQVGYIETDNLSGSVDAEMSDLVPVSTTLESEEVGYSETDNLTGSVDADKTEFVPVSTSSDSEQVDYRATDNETGSVDPDMNGVVPLSTSLESEQVDYSATDNLTGSLDIARSELVPESFSLESVQANDSETNDMAGCVDAENSELVSISTSLESKQVDYSATDDLAGSVDTNDSELVPMSTSLESEQVDYSATDNLTGSADATINELVQVSPSLESKQVDYSATDNLAGSVDADNIDLVPISTLESKQVDYGATDNLTGNVDDGITSELVPVPTSLDSEPSVNRETIHQIDGVDAEFSEAVPISTSLEAEQVDYSATDNLTAVVDTELSEPVPLSTSLEPEQANYSTTGNLTGGVDTDLCESAPVSTSLGSDDDERNRHVVDDSVDASEMKKSALLDDLVPSSDLANKIDVGNIERSDYENPILNTVPEIHSVQMASDGENISRTELFLVSGAACLPHPSEELTSREDAYIISPLNWLVVADGVGQWSLEGSNTGVYIRELMGNCEDIVSNCDNISTIKPAEVLIRSTAETHSPGSSSVLVAYFDGLALHAANVGNTGFIIIRHGSIFKTSNAMFHEFSFPIHIVKGDDHSEIIEEYKIDLNDGDVIVFGTNGLFDNLYEKEIASTVSKSLQASLKPEEIAEILATTAQEVGRSRSTRSPFGDAAQALGYVGYAGGKLDDVTVIVSLVQTT*