Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204040 | XP_013457425.1 | 94.026 | 1088 | 56 | 2 | 1 | 1088 | 1 | 1079 | 0.0 | 1973 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204040 | sp|Q9SLN1|FPP7_ARATH | 45.479 | 752 | 321 | 14 | 1 | 741 | 1 | 674 | 0.0 | 554 |
| Msa1204040 | sp|Q9SLN1|FPP7_ARATH | 36.066 | 183 | 95 | 5 | 913 | 1086 | 727 | 896 | 1.93e-16 | 88.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018160 | Msa1204040 | 0.830621 | 2.648717e-55 | -8.615850e-47 |
| Msa0034210 | Msa1204040 | 0.803713 | 3.057488e-49 | -8.615850e-47 |
| Msa0036870 | Msa1204040 | 0.800015 | 1.757404e-48 | -8.615850e-47 |
| Msa0052260 | Msa1204040 | 0.806042 | 9.967160e-50 | -8.615850e-47 |
| Msa0057420 | Msa1204040 | 0.801183 | 1.015298e-48 | -8.615850e-47 |
| Msa0071860 | Msa1204040 | 0.802886 | 4.535170e-49 | -8.615850e-47 |
| Msa0071880 | Msa1204040 | 0.840170 | 1.021944e-57 | -8.615850e-47 |
| Msa0097260 | Msa1204040 | 0.816407 | 5.619659e-52 | -8.615850e-47 |
| Msa0117480 | Msa1204040 | 0.800839 | 1.193687e-48 | -8.615850e-47 |
| Msa0626450 | Msa1204040 | 0.807108 | 5.936617e-50 | -8.615850e-47 |
| Msa0626490 | Msa1204040 | 0.803903 | 2.791679e-49 | -8.615850e-47 |
| Msa0640200 | Msa1204040 | 0.804982 | 1.662864e-49 | -8.615850e-47 |
| Msa0664600 | Msa1204040 | 0.800746 | 1.246938e-48 | -8.615850e-47 |
| Msa0700460 | Msa1204040 | 0.830233 | 3.295515e-55 | -8.615850e-47 |
| Msa0738700 | Msa1204040 | 0.813383 | 2.631963e-51 | -8.615850e-47 |
| Msa0741220 | Msa1204040 | 0.808165 | 3.540388e-50 | -8.615850e-47 |
| Msa0761670 | Msa1204040 | 0.824946 | 6.127093e-54 | -8.615850e-47 |
| Msa0829300 | Msa1204040 | 0.803642 | 3.162295e-49 | -8.615850e-47 |
| Msa0829330 | Msa1204040 | 0.818133 | 2.297741e-52 | -8.615850e-47 |
| Msa0128310 | Msa1204040 | 0.817996 | 2.467972e-52 | -8.615850e-47 |
| Msa0146040 | Msa1204040 | 0.820006 | 8.616238e-53 | -8.615850e-47 |
| Msa0174440 | Msa1204040 | 0.806698 | 7.250408e-50 | -8.615850e-47 |
| Msa0419700 | Msa1204040 | 0.833653 | 4.712398e-56 | -8.615850e-47 |
| Msa0472950 | Msa1204040 | 0.816248 | 6.099790e-52 | -8.615850e-47 |
| Msa1042160 | Msa1204040 | 0.802584 | 5.235022e-49 | -8.615850e-47 |
| Msa1042190 | Msa1204040 | 0.800485 | 1.410023e-48 | -8.615850e-47 |
| Msa1044680 | Msa1204040 | 0.815871 | 7.402371e-52 | -8.615850e-47 |
| Msa1097980 | Msa1204040 | 0.802856 | 4.600771e-49 | -8.615850e-47 |
| Msa1105640 | Msa1204040 | 0.804586 | 2.012136e-49 | -8.615850e-47 |
| Msa1105780 | Msa1204040 | 0.809536 | 1.802702e-50 | -8.615850e-47 |
| Msa0251620 | Msa1204040 | 0.800031 | 1.743923e-48 | -8.615850e-47 |
| Msa1204040 | Msa1254760 | 0.801006 | 1.103417e-48 | -8.615850e-47 |
| Msa1204040 | Msa1321340 | 0.822878 | 1.871548e-53 | -8.615850e-47 |
| Msa1204040 | Msa1415540 | 0.814865 | 1.239445e-51 | -8.615850e-47 |
| Msa1204040 | Msa1440960 | 0.806029 | 1.003087e-49 | -8.615850e-47 |
| Msa1204040 | Msa1452140 | 0.803009 | 4.277739e-49 | -8.615850e-47 |
| Msa0511750 | Msa1204040 | 0.825855 | 3.732292e-54 | -8.615850e-47 |
| Msa0528570 | Msa1204040 | 0.819211 | 1.308061e-52 | -8.615850e-47 |
| Msa0549370 | Msa1204040 | 0.820597 | 6.306752e-53 | -8.615850e-47 |
| Msa0574050 | Msa1204040 | 0.822021 | 2.959321e-53 | -8.615850e-47 |
| Msa0584420 | Msa1204040 | 0.804105 | 2.534735e-49 | -8.615850e-47 |
| Msa0587620 | Msa1204040 | 0.806967 | 6.358846e-50 | -8.615850e-47 |
| Msa0978950 | Msa1204040 | 0.800471 | 1.419386e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204040 | MtrunA17_Chr4g0053121 | 94.026 | 1088 | 56 | 2 | 1 | 1088 | 1 | 1079 | 0.0 | 1973 |
| Msa1204040 | MtrunA17_Chr5g0401911 | 47.761 | 737 | 247 | 16 | 349 | 1076 | 231 | 838 | 0.0 | 570 |
| Msa1204040 | MtrunA17_Chr5g0401911 | 62.605 | 238 | 88 | 1 | 1 | 238 | 1 | 237 | 1.20e-82 | 287 |
| Msa1204040 | MtrunA17_Chr4g0044561 | 34.480 | 1105 | 593 | 24 | 1 | 1082 | 1 | 997 | 7.94e-149 | 470 |
| Msa1204040 | MtrunA17_Chr3g0142411 | 36.433 | 527 | 267 | 8 | 1 | 463 | 1 | 523 | 7.75e-78 | 278 |
| Msa1204040 | MtrunA17_Chr1g0156371 | 37.294 | 547 | 280 | 14 | 1 | 494 | 1 | 537 | 1.27e-77 | 277 |
| Msa1204040 | MtrunA17_Chr5g0405291 | 35.248 | 505 | 253 | 11 | 1 | 458 | 1 | 478 | 3.89e-61 | 224 |
| Msa1204040 | MtrunA17_Chr8g0384881 | 37.417 | 302 | 129 | 5 | 1 | 271 | 1 | 273 | 9.03e-42 | 163 |
| Msa1204040 | MtrunA17_Chr1g0159951 | 37.229 | 231 | 120 | 2 | 41 | 271 | 138 | 343 | 1.85e-32 | 136 |
| Msa1204040 | MtrunA17_Chr3g0130811 | 38.494 | 239 | 114 | 5 | 38 | 271 | 47 | 257 | 1.14e-30 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204040 | AT2G23360.1 | 45.479 | 752 | 321 | 14 | 1 | 741 | 1 | 674 | 0.0 | 554 |
| Msa1204040 | AT2G23360.1 | 36.066 | 183 | 95 | 5 | 913 | 1086 | 727 | 896 | 1.97e-17 | 88.6 |
| Msa1204040 | AT1G19835.6 | 37.751 | 498 | 260 | 8 | 1 | 457 | 1 | 489 | 1.15e-77 | 276 |
| Msa1204040 | AT1G19835.5 | 37.751 | 498 | 260 | 8 | 1 | 457 | 1 | 489 | 1.15e-77 | 276 |
| Msa1204040 | AT1G19835.3 | 37.751 | 498 | 260 | 8 | 1 | 457 | 1 | 489 | 1.15e-77 | 276 |
| Msa1204040 | AT1G19835.1 | 37.751 | 498 | 260 | 8 | 1 | 457 | 1 | 489 | 1.15e-77 | 276 |
| Msa1204040 | AT1G19835.4 | 37.751 | 498 | 260 | 8 | 1 | 457 | 1 | 489 | 1.15e-77 | 276 |
| Msa1204040 | AT1G19835.2 | 37.751 | 498 | 260 | 8 | 1 | 457 | 1 | 489 | 1.15e-77 | 276 |
| Msa1204040 | AT1G47900.2 | 28.511 | 947 | 547 | 26 | 33 | 945 | 101 | 951 | 3.76e-75 | 270 |
| Msa1204040 | AT1G47900.3 | 28.360 | 945 | 553 | 25 | 33 | 945 | 101 | 953 | 6.77e-75 | 269 |
| Msa1204040 | AT1G47900.1 | 28.360 | 945 | 553 | 25 | 33 | 945 | 101 | 953 | 6.77e-75 | 269 |
| Msa1204040 | AT4G36120.2 | 34.940 | 498 | 277 | 9 | 1 | 454 | 1 | 495 | 4.87e-62 | 230 |
| Msa1204040 | AT4G36120.1 | 34.940 | 498 | 277 | 9 | 1 | 454 | 1 | 495 | 4.87e-62 | 230 |
| Msa1204040 | AT1G77580.4 | 37.500 | 232 | 110 | 2 | 39 | 270 | 20 | 216 | 1.99e-33 | 139 |
| Msa1204040 | AT1G77580.2 | 37.500 | 232 | 110 | 2 | 39 | 270 | 54 | 250 | 2.36e-33 | 139 |
| Msa1204040 | AT1G77580.3 | 37.500 | 232 | 110 | 2 | 39 | 270 | 54 | 250 | 2.36e-33 | 139 |
| Msa1204040 | AT1G77580.1 | 37.500 | 232 | 110 | 2 | 39 | 270 | 20 | 216 | 3.05e-33 | 137 |
| Msa1204040 | AT3G05270.3 | 33.451 | 284 | 148 | 5 | 1 | 271 | 1 | 256 | 4.57e-32 | 134 |
| Msa1204040 | AT3G05270.2 | 33.451 | 284 | 148 | 5 | 1 | 271 | 1 | 256 | 4.57e-32 | 134 |
| Msa1204040 | AT3G05270.1 | 33.451 | 284 | 148 | 5 | 1 | 271 | 1 | 256 | 4.57e-32 | 134 |
| Msa1204040 | AT3G19370.3 | 30.239 | 377 | 154 | 10 | 170 | 545 | 158 | 426 | 1.13e-29 | 127 |
| Msa1204040 | AT3G19370.3 | 31.095 | 283 | 128 | 10 | 802 | 1081 | 480 | 698 | 5.96e-15 | 80.1 |
| Msa1204040 | AT3G19370.1 | 30.239 | 377 | 154 | 10 | 170 | 545 | 158 | 426 | 1.13e-29 | 127 |
| Msa1204040 | AT3G19370.1 | 31.095 | 283 | 128 | 10 | 802 | 1081 | 480 | 698 | 5.96e-15 | 80.1 |
| Msa1204040 | AT3G19370.2 | 30.239 | 377 | 154 | 10 | 170 | 545 | 158 | 426 | 1.13e-29 | 127 |
| Msa1204040 | AT3G19370.2 | 31.095 | 283 | 128 | 10 | 802 | 1081 | 480 | 698 | 5.96e-15 | 80.1 |
| Msa1204040 | AT1G21810.3 | 36.364 | 209 | 91 | 3 | 62 | 270 | 14 | 180 | 1.84e-25 | 113 |
| Msa1204040 | AT1G21810.1 | 36.364 | 209 | 91 | 3 | 62 | 270 | 14 | 180 | 1.84e-25 | 113 |
Find 224 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCAATGGCTTGTCTTTC+TGG | 0.087478 | 8_1:+59502226 | None:intergenic |
| TGCTGTTTGGTTCTCTTTAT+TGG | 0.145621 | 8_1:+59503280 | None:intergenic |
| CTGCAATAACATTGTCAAAA+AGG | 0.191246 | 8_1:+59501070 | None:intergenic |
| TCAATCTCATATTTCTTTAG+AGG | 0.230526 | 8_1:-59506063 | Msa1204040:intron |
| TTACATTCTTCTTAGCATTA+TGG | 0.247487 | 8_1:-59505584 | Msa1204040:exon |
| CAAAGTATCGATTCTTCTAT+TGG | 0.248764 | 8_1:+59504092 | None:intergenic |
| CCAATCAAATTGTTTCTTGA+TGG | 0.251020 | 8_1:+59502916 | None:intergenic |
| GTTTGTGGAAGAAGTTATTA+TGG | 0.255118 | 8_1:-59500726 | Msa1204040:CDS |
| CAAATTCTCTCTCTTCATTT+CGG | 0.261599 | 8_1:+59504361 | None:intergenic |
| GTCCTTAACGGATCAACTTT+TGG | 0.276773 | 8_1:-59502630 | Msa1204040:CDS |
| AGAGGTCGGTCTCAAGGTTT+TGG | 0.284127 | 8_1:-59502468 | Msa1204040:CDS |
| AATCTCACTTCAAAAGAAAA+TGG | 0.285788 | 8_1:-59505496 | Msa1204040:CDS |
| TTCCACAAACTTCCGCTTCC+CGG | 0.295489 | 8_1:+59500739 | None:intergenic |
| TGTCTTTCTGGTTAATATCA+TGG | 0.309747 | 8_1:+59502238 | None:intergenic |
| CAATCCTTAAAAGAATCTTA+TGG | 0.311961 | 8_1:-59502569 | Msa1204040:CDS |
| CCATTTGGATGGAGCTCTTA+AGG | 0.313034 | 8_1:-59504715 | Msa1204040:CDS |
| AGCGAAAGTGAAGCAGAGTT+TGG | 0.313969 | 8_1:-59502881 | Msa1204040:CDS |
| TGATCCTTCAAATAACTCTT+TGG | 0.316192 | 8_1:-59503344 | Msa1204040:CDS |
| CGAAATGAAGAGAGAGAATT+TGG | 0.316984 | 8_1:-59504360 | Msa1204040:CDS |
| TTGGCATCAATGTCTGATAT+TGG | 0.327469 | 8_1:-59503868 | Msa1204040:CDS |
| TAACATTCCCAGTTGGCTTC+AGG | 0.333343 | 8_1:-59503518 | Msa1204040:CDS |
| TCAGCTGCTTCCCAAGATTA+AGG | 0.339508 | 8_1:+59501121 | None:intergenic |
| CATGGATGACTTTGTTGAAA+TGG | 0.341756 | 8_1:-59503716 | Msa1204040:CDS |
| CCATCAAGAAACAATTTGAT+TGG | 0.345168 | 8_1:-59502916 | Msa1204040:CDS |
| ATCTTGATGCACAGCATAAA+GGG | 0.347191 | 8_1:-59502502 | Msa1204040:CDS |
| TAACCTTTGCGAGTTCTCTT+TGG | 0.348817 | 8_1:-59503887 | Msa1204040:CDS |
| CAAGAAACCATCCTTAATCT+TGG | 0.356322 | 8_1:-59501132 | Msa1204040:CDS |
| GTGTCAGAGATTGCGCCTTC+TGG | 0.356686 | 8_1:-59504265 | Msa1204040:CDS |
| GTACCCTCAGTAAATAATTC+AGG | 0.357209 | 8_1:-59503142 | Msa1204040:CDS |
| TACTACATCCTGAAGCCAAC+TGG | 0.357862 | 8_1:+59503510 | None:intergenic |
| AGTTAGCTGTGACAAGTAAA+AGG | 0.358910 | 8_1:-59504581 | Msa1204040:CDS |
| TCTTGCTGATAAAGAAGAAT+TGG | 0.361994 | 8_1:-59505079 | Msa1204040:CDS |
| GATCTTGATGCACAGCATAA+AGG | 0.362676 | 8_1:-59502503 | Msa1204040:CDS |
| CCGCTTCCCGGTTTCTTAGT+AGG | 0.365002 | 8_1:+59500751 | None:intergenic |
| AATCTAGATCCGTGCGTCTT+TGG | 0.365024 | 8_1:-59503400 | Msa1204040:CDS |
| AAAGCATTACTCTTGAGAAT+TGG | 0.371530 | 8_1:+59503995 | None:intergenic |
| TTCTGCGTTGATTTCAGATT+CGG | 0.371585 | 8_1:-59503809 | Msa1204040:CDS |
| AAAGTATCGATTCTTCTATT+GGG | 0.379720 | 8_1:+59504093 | None:intergenic |
| GTCTTCATGAGCTTGCTGTT+TGG | 0.382583 | 8_1:+59503267 | None:intergenic |
| TCTGATCTCACCACCATTCC+AGG | 0.383901 | 8_1:-59500886 | Msa1204040:CDS |
| ACTTGTTCCTTCTTATTTCA+AGG | 0.384785 | 8_1:+59504169 | None:intergenic |
| TCTTCACTTGACAGTTCTCC+TGG | 0.388800 | 8_1:-59504120 | Msa1204040:CDS |
| AGTCTCATCACTTGTGCATA+AGG | 0.390608 | 8_1:+59503165 | None:intergenic |
| TGAAGAAAGAGTAGCCCATT+TGG | 0.391774 | 8_1:-59504730 | Msa1204040:CDS |
| ATGAAAATGTAAATGATGTT+TGG | 0.396016 | 8_1:+59506160 | None:intergenic |
| GAACAGAGAGAGGTGTAAAA+AGG | 0.396739 | 8_1:+59506342 | None:intergenic |
| TTCATAACTTTCAGGGGAGC+AGG | 0.401277 | 8_1:+59500988 | None:intergenic |
| TTCCAAAAGTTGATCCGTTA+AGG | 0.403468 | 8_1:+59502628 | None:intergenic |
| TCATGGTTTGAGCCCTCCTT+TGG | 0.414165 | 8_1:+59502255 | None:intergenic |
| CATTGTACCTACTAAGAAAC+CGG | 0.419244 | 8_1:-59500758 | Msa1204040:CDS |
| AGGTCTGGATGAAGCATTGC+GGG | 0.424912 | 8_1:-59504766 | Msa1204040:CDS |
| GACTACCCCTGATCACATTT+CGG | 0.431865 | 8_1:-59503590 | Msa1204040:CDS |
| TGCGCCTTCTGGTTCGGAAA+CGG | 0.432770 | 8_1:-59504254 | Msa1204040:CDS |
| GAGTTGCAATTCCAGACATC+TGG | 0.435090 | 8_1:+59502394 | None:intergenic |
| CCTCAAGTAACTACTTCAAA+TGG | 0.436735 | 8_1:-59502794 | Msa1204040:CDS |
| CATCAAGAAACAATTTGATT+GGG | 0.442321 | 8_1:-59502915 | Msa1204040:CDS |
| CAGTGTTACTGCTAATGATT+TGG | 0.444242 | 8_1:-59500806 | Msa1204040:CDS |
| GTGGTGGATGTGGTACTGAT+AGG | 0.446196 | 8_1:+59501042 | None:intergenic |
| TTTGGTTCCGACAAAGTCTC+TGG | 0.446495 | 8_1:-59503382 | Msa1204040:CDS |
| GAGAAGTCCGAAATGTGATC+AGG | 0.446564 | 8_1:+59503583 | None:intergenic |
| AAAGAAGTTGATGAGATCAA+TGG | 0.447443 | 8_1:-59503637 | Msa1204040:CDS |
| AGAGATTGCGCCTTCTGGTT+CGG | 0.447959 | 8_1:-59504260 | Msa1204040:CDS |
| CCTTAAGAGCTCCATCCAAA+TGG | 0.448736 | 8_1:+59504715 | None:intergenic |
| TCAGGATGTTTCTTGTATGA+AGG | 0.449394 | 8_1:-59502942 | Msa1204040:CDS |
| CTGACACTCTGATTCTAACT+TGG | 0.449595 | 8_1:+59504281 | None:intergenic |
| GCGAAAGTGAAGCAGAGTTT+GGG | 0.451171 | 8_1:-59502880 | Msa1204040:CDS |
| AGCAAAAGTTGAAGTGTTGT+CGG | 0.451282 | 8_1:-59504796 | Msa1204040:CDS |
| GTCAGTAATATTTACATCAC+TGG | 0.452498 | 8_1:+59503309 | None:intergenic |
| TGATAGGATTGAGTCCTTAA+CGG | 0.453872 | 8_1:-59502642 | Msa1204040:CDS |
| AACTAACAACAGCTTTGGAT+TGG | 0.456338 | 8_1:-59502988 | Msa1204040:CDS |
| TGAAGAACTAACAACAGCTT+TGG | 0.456722 | 8_1:-59502993 | Msa1204040:CDS |
| GTCTCATCACTTGTGCATAA+GGG | 0.458049 | 8_1:+59503166 | None:intergenic |
| TGAGACTTTCAAGTGTTCAA+TGG | 0.458134 | 8_1:+59500667 | None:intergenic |
| GAAGACCTGAGTAAGTCAAT+AGG | 0.458201 | 8_1:-59503250 | Msa1204040:CDS |
| ATTAGAAAATAAGCTTGCTT+CGG | 0.458274 | 8_1:-59505040 | Msa1204040:CDS |
| AAGGGAAAGAAGTGAAAAGA+TGG | 0.459864 | 8_1:+59506264 | None:intergenic |
| GTTAAACTCAACTAGTTCAA+TGG | 0.460981 | 8_1:-59504148 | Msa1204040:CDS |
| TCCAGAGGTTGTATAATGCC+TGG | 0.464954 | 8_1:+59500868 | None:intergenic |
| AAGAAACCATCCTTAATCTT+GGG | 0.465020 | 8_1:-59501131 | Msa1204040:CDS |
| CAACAGAGAGAGTGTGTGTT+TGG | 0.466141 | 8_1:+59506227 | None:intergenic |
| TGGGAAGCAGCTGAGGTCAT+TGG | 0.471135 | 8_1:-59501112 | Msa1204040:CDS |
| GTGTGTGTTTGGTGAGAGAA+AGG | 0.471339 | 8_1:+59506238 | None:intergenic |
| TGAAGCATTGCGGGACAGAT+TGG | 0.471993 | 8_1:-59504757 | Msa1204040:CDS |
| TACGCCTTAAAACTAACAAC+CGG | 0.472852 | 8_1:-59500522 | Msa1204040:three_prime_UTR |
| GATCAATGCTGAATCTCAAA+AGG | 0.476356 | 8_1:-59502696 | Msa1204040:CDS |
| AGGTCAAGTTGCTGTGGAGC+AGG | 0.476966 | 8_1:-59503917 | Msa1204040:CDS |
| CATTGTAACTACTAAGAAAC+CGG | 0.478375 | 8_1:-59500782 | Msa1204040:CDS |
| TCCAGGCATTATACAACCTC+TGG | 0.478551 | 8_1:-59500869 | Msa1204040:CDS |
| CTTCAGAAGTGGAAAACAAA+AGG | 0.479195 | 8_1:-59503782 | Msa1204040:CDS |
| ACCACCAAAGAGTTATTTGA+AGG | 0.479471 | 8_1:+59503340 | None:intergenic |
| AGAATTAGAGACCAGATGTC+TGG | 0.480614 | 8_1:-59502405 | Msa1204040:CDS |
| AAAGTCTCTGGTCATATTGA+AGG | 0.480911 | 8_1:-59503370 | Msa1204040:CDS |
| GGCTTCAAAGGAATTTGAAA+AGG | 0.481919 | 8_1:-59504625 | Msa1204040:CDS |
| CGGAAACGGTTACCAGGTCC+TGG | 0.484770 | 8_1:-59504240 | Msa1204040:CDS |
| ATCTTCCCTTGATGAACTAA+AGG | 0.486259 | 8_1:-59503542 | Msa1204040:CDS |
| CTTGTTCCTTCTTATTTCAA+GGG | 0.487122 | 8_1:+59504170 | None:intergenic |
| TCATGGTCCTGCAGAAGCAT+TGG | 0.487131 | 8_1:-59503757 | Msa1204040:CDS |
| TGACGGAGTGAGTGTGTTGT+TGG | 0.487446 | 8_1:+59506316 | None:intergenic |
| GAAGCAGAGTTTGGGATGAT+AGG | 0.487695 | 8_1:-59502872 | Msa1204040:CDS |
| TTAGCAGTAACACTGTCATC+TGG | 0.489817 | 8_1:+59500814 | None:intergenic |
| TGTTGTCGTGATGGTGGTGG+TGG | 0.490934 | 8_1:+59501026 | None:intergenic |
| GTGGAAAACAAAAGGAATCA+TGG | 0.494775 | 8_1:-59503774 | Msa1204040:CDS |
| TGTTATCCTTTAGTTCATCA+AGG | 0.494969 | 8_1:+59503536 | None:intergenic |
| AGAATATTAGAGTAGCTTTG+AGG | 0.496510 | 8_1:-59503432 | Msa1204040:CDS |
| TGAAGCTCCAATGCTTCTGC+AGG | 0.497457 | 8_1:+59503750 | None:intergenic |
| AGAAGCATTATCTTTCTCAA+TGG | 0.498267 | 8_1:+59504425 | None:intergenic |
| GTTACCAGGTCCTGGTTCCC+TGG | 0.500382 | 8_1:-59504232 | Msa1204040:CDS |
| TTGGTGAGAGAAAGGGAAAA+GGG | 0.502134 | 8_1:+59506246 | None:intergenic |
| AACCGGGAAGCGGAAGTTTG+TGG | 0.503170 | 8_1:-59500741 | Msa1204040:CDS |
| CTTAAGAGCTCCATCCAAAT+GGG | 0.504579 | 8_1:+59504716 | None:intergenic |
| ACTTTCAGGGGAGCAGGGAT+AGG | 0.504663 | 8_1:+59500994 | None:intergenic |
| CTGGTTCGGAAACGGTTACC+AGG | 0.505039 | 8_1:-59504246 | Msa1204040:CDS |
| AATAATTCAGGAATGCCAAC+GGG | 0.505739 | 8_1:-59503130 | Msa1204040:CDS |
| GAGATTCCCTTGAAATAAGA+AGG | 0.508635 | 8_1:-59504176 | Msa1204040:CDS |
| AACAGCCGCTTCAGAAAAGT+TGG | 0.508979 | 8_1:-59501163 | Msa1204040:CDS |
| AATTGCAACTCCAGCTTGAA+AGG | 0.510120 | 8_1:-59502382 | Msa1204040:intron |
| CGTGATGGTGGTGGTGGATG+TGG | 0.514239 | 8_1:+59501032 | None:intergenic |
| CGTTAAAAGATTCCCTAAGT+AGG | 0.514403 | 8_1:-59504032 | Msa1204040:CDS |
| TCTTTCCTATTGACTTACTC+AGG | 0.514955 | 8_1:+59503245 | None:intergenic |
| TGGTTCTCTTTATTGGTGAG+AGG | 0.516501 | 8_1:+59503287 | None:intergenic |
| TTTGGTGAGAGAAAGGGAAA+AGG | 0.519485 | 8_1:+59506245 | None:intergenic |
| GTGTGTTATGATTTACTGAA+TGG | 0.521589 | 8_1:-59503040 | Msa1204040:CDS |
| ATAGGACTTACCTTTCAAGC+TGG | 0.522101 | 8_1:+59502372 | None:intergenic |
| AGCTTCAGACATAAATCTCA+TGG | 0.522285 | 8_1:-59503734 | Msa1204040:CDS |
| TCAATGGCTTCTCAGAAACT+AGG | 0.522844 | 8_1:-59503621 | Msa1204040:CDS |
| AAACATGGAAACTGTTCTGC+GGG | 0.522978 | 8_1:+59502818 | None:intergenic |
| AAGATGGGAAAGTGAAGAGT+GGG | 0.524676 | 8_1:+59506280 | None:intergenic |
| TCCTTCAAATAACTCTTTGG+TGG | 0.527792 | 8_1:-59503341 | Msa1204040:CDS |
| AATATGACCAGAGACTTTGT+CGG | 0.528015 | 8_1:+59503375 | None:intergenic |
| AAGAATCAACTTGCCTGCTG+TGG | 0.528599 | 8_1:-59503206 | Msa1204040:CDS |
| AGCTGTGACAAGTAAAAGGC+TGG | 0.529778 | 8_1:-59504577 | Msa1204040:CDS |
| CATAATGAAGAATCATCTAA+AGG | 0.532662 | 8_1:-59503937 | Msa1204040:CDS |
| GAGAAAGACACTGAAATCTC+TGG | 0.532861 | 8_1:-59503670 | Msa1204040:CDS |
| GGCTTCAATCAGCTACTGAT+AGG | 0.532979 | 8_1:-59502658 | Msa1204040:CDS |
| CTGCTTCCCAAGATTAAGGA+TGG | 0.533937 | 8_1:+59501125 | None:intergenic |
| ACTTTCAAGTGTTCAATGGA+AGG | 0.534029 | 8_1:+59500671 | None:intergenic |
| TCTAAAGAAATATGAGATTG+AGG | 0.534035 | 8_1:+59506065 | None:intergenic |
| AGGAATGCCAACGGGCTACA+TGG | 0.535263 | 8_1:-59503122 | Msa1204040:CDS |
| GAAAGAGTAGCCCATTTGGA+TGG | 0.535573 | 8_1:-59504726 | Msa1204040:CDS |
| TTCGAGAAGAACAAAGGCAA+AGG | 0.536252 | 8_1:-59504668 | Msa1204040:CDS |
| AAAAGGGATGCATCCTTTGG+TGG | 0.540639 | 8_1:+59501087 | None:intergenic |
| ATATTCTCGAGTATATCATC+AGG | 0.542580 | 8_1:+59503448 | None:intergenic |
| ATTCCTGAATTATTTACTGA+GGG | 0.542973 | 8_1:+59503139 | None:intergenic |
| CCGAGTGCTTGAAAAGGAGT+TGG | 0.544074 | 8_1:-59504388 | Msa1204040:CDS |
| GTGTAATTCTAAAGACGAGC+TGG | 0.545543 | 8_1:-59505007 | Msa1204040:CDS |
| AGGGAAAGAAGTGAAAAGAT+GGG | 0.547589 | 8_1:+59506265 | None:intergenic |
| GATTCGGAGCACTTCAGAAG+TGG | 0.547858 | 8_1:-59503793 | Msa1204040:CDS |
| GTTGTCGGTGAAGCAAGGTC+TGG | 0.549630 | 8_1:-59504781 | Msa1204040:CDS |
| ATTCTTCTATTGGGAGTCCC+AGG | 0.550407 | 8_1:+59504102 | None:intergenic |
| ATTAAAAGAGGTCGGTCTCA+AGG | 0.553721 | 8_1:-59502474 | Msa1204040:CDS |
| TGAGGTCCGAGTGCTTGAAA+AGG | 0.553776 | 8_1:-59504394 | Msa1204040:CDS |
| TTCTTAGTAGGTACAATGGC+CGG | 0.554541 | 8_1:+59500763 | None:intergenic |
| GATTCATGATGCTGTGATGA+AGG | 0.557033 | 8_1:-59504646 | Msa1204040:CDS |
| TGAATCTCAAAAGGAAACAT+TGG | 0.560533 | 8_1:-59502687 | Msa1204040:CDS |
| TGTTCTCAGCATGCCAAAGG+AGG | 0.561256 | 8_1:-59502268 | Msa1204040:intron |
| TAATGCTTCTCTGACATATG+AGG | 0.561537 | 8_1:-59504412 | Msa1204040:CDS |
| GAGGTCATTGGCTCCACCAA+AGG | 0.561831 | 8_1:-59501100 | Msa1204040:CDS |
| TGCTGTGATGAAGGCTTCAA+AGG | 0.562296 | 8_1:-59504637 | Msa1204040:CDS |
| CTTTCAAGTGTTCAATGGAA+GGG | 0.563076 | 8_1:+59500672 | None:intergenic |
| TTTGCCAGGGAACCAGGACC+TGG | 0.563279 | 8_1:+59504228 | None:intergenic |
| CGGTTTCTTAGTAGGTACAA+TGG | 0.565201 | 8_1:+59500759 | None:intergenic |
| ATTGCGCAAGAAGCAGTGGC+AGG | 0.569097 | 8_1:-59504967 | Msa1204040:intron |
| TCATAACTTTCAGGGGAGCA+GGG | 0.570846 | 8_1:+59500989 | None:intergenic |
| ACTACATCCTGAAGCCAACT+GGG | 0.574852 | 8_1:+59503511 | None:intergenic |
| GGAATTTGAAAAGGAGTGCA+TGG | 0.575103 | 8_1:-59504616 | Msa1204040:CDS |
| CCATTTGAAGTAGTTACTTG+AGG | 0.575575 | 8_1:+59502794 | None:intergenic |
| AAAGATGGGAAAGTGAAGAG+TGG | 0.576595 | 8_1:+59506279 | None:intergenic |
| AGAAGTCCGAAATGTGATCA+GGG | 0.576910 | 8_1:+59503584 | None:intergenic |
| GTTATCCTTTAGTTCATCAA+GGG | 0.578574 | 8_1:+59503537 | None:intergenic |
| CATTCCTGAATTATTTACTG+AGG | 0.578669 | 8_1:+59503138 | None:intergenic |
| ATCTAAAGGTCAAGTTGCTG+TGG | 0.578768 | 8_1:-59503923 | Msa1204040:CDS |
| GAATTATCACAATCCACAGC+AGG | 0.579190 | 8_1:+59503193 | None:intergenic |
| GGTTAGCTGTGCTGACTCCT+CGG | 0.581274 | 8_1:-59503833 | Msa1204040:CDS |
| CGGTTTCTTAGTAGTTACAA+TGG | 0.584722 | 8_1:+59500783 | None:intergenic |
| CTTCACTTGACAGTTCTCCT+GGG | 0.587869 | 8_1:-59504119 | Msa1204040:CDS |
| TCGAGAGATGTATTCTGATG+AGG | 0.588322 | 8_1:-59502750 | Msa1204040:CDS |
| GGTGATAGTAAGTGTCGGCT+TGG | 0.589706 | 8_1:+59506379 | None:intergenic |
| AGAATCTTATGGAATACTTG+AGG | 0.592051 | 8_1:-59502558 | Msa1204040:CDS |
| TTAATCTTGGGAAGCAGCTG+AGG | 0.592805 | 8_1:-59501119 | Msa1204040:CDS |
| GATAAACTTACAGTTCGCAA+TGG | 0.595440 | 8_1:+59502213 | None:intergenic |
| TCTCAAAAGGAAACATTGGA+AGG | 0.596127 | 8_1:-59502683 | Msa1204040:CDS |
| GTTCTCAGCATGCCAAAGGA+GGG | 0.598290 | 8_1:-59502267 | Msa1204040:intron |
| TGAAAAGGAGTGCATGGTGT+GGG | 0.598382 | 8_1:-59504610 | Msa1204040:CDS |
| TGTGTGTTTGGTGAGAGAAA+GGG | 0.600796 | 8_1:+59506239 | None:intergenic |
| TGAAGATGATACTAAATCCA+AGG | 0.601228 | 8_1:-59500932 | Msa1204040:CDS |
| TAAAGGATAACATTCCCAGT+TGG | 0.608418 | 8_1:-59503525 | Msa1204040:CDS |
| AAAGATAAAATCTTCTCCAG+AGG | 0.609414 | 8_1:+59500853 | None:intergenic |
| GAAGTGTTGTCGGTGAAGCA+AGG | 0.611312 | 8_1:-59504786 | Msa1204040:CDS |
| CCTACTAAGAAACCGGGAAG+CGG | 0.611824 | 8_1:-59500751 | Msa1204040:CDS |
| TGAAATCAACGCAGAAGCCG+AGG | 0.612778 | 8_1:+59503816 | None:intergenic |
| TAAAATTGCGCAAGAAGCAG+TGG | 0.613741 | 8_1:-59504971 | Msa1204040:CDS |
| CTCAAAAGGAAACATTGGAA+GGG | 0.614996 | 8_1:-59502682 | Msa1204040:CDS |
| AAATAATTCAGGAATGCCAA+CGG | 0.615232 | 8_1:-59503131 | Msa1204040:CDS |
| TTGTATAATGCCTGGAATGG+TGG | 0.616953 | 8_1:+59500876 | None:intergenic |
| AAGAGAGAGAATTTGGTCGT+CGG | 0.617107 | 8_1:-59504353 | Msa1204040:CDS |
| TAAAGGGGCGGAATTAAAAG+AGG | 0.618771 | 8_1:-59502486 | Msa1204040:CDS |
| TAATGTTCTCAGCATGCCAA+AGG | 0.619696 | 8_1:-59502271 | Msa1204040:intron |
| GTAATATTTACATCACTGGA+TGG | 0.620257 | 8_1:+59503313 | None:intergenic |
| GTAGTTACTTGAGGAAAACA+TGG | 0.620760 | 8_1:+59502803 | None:intergenic |
| TCTCTAATTCTTCACAACTG+TGG | 0.621010 | 8_1:+59502417 | None:intergenic |
| TGGGAGTCAAGAGAAAATGA+CGG | 0.622687 | 8_1:+59506299 | None:intergenic |
| TTGAAAAGGAGTGCATGGTG+TGG | 0.626086 | 8_1:-59504611 | Msa1204040:CDS |
| GATTTGTTCGAGAAGAACAA+AGG | 0.633197 | 8_1:-59504674 | Msa1204040:CDS |
| TTATGATTTACTGAATGGCA+AGG | 0.634162 | 8_1:-59503035 | Msa1204040:CDS |
| AAAAGGAAACATTGGAAGGG+CGG | 0.636835 | 8_1:-59502679 | Msa1204040:CDS |
| AAGACAATTAACTCAAGCTG+AGG | 0.644639 | 8_1:-59504481 | Msa1204040:CDS |
| ACACGGACCATGTAGCCCGT+TGG | 0.651352 | 8_1:+59503115 | None:intergenic |
| GGGGCGGAATTAAAAGAGGT+CGG | 0.656076 | 8_1:-59502482 | Msa1204040:CDS |
| AAAACATGGAAACTGTTCTG+CGG | 0.658488 | 8_1:+59502817 | None:intergenic |
| TGGTGGTGAGATCAGAGTCA+CGG | 0.661820 | 8_1:+59500893 | None:intergenic |
| AGGTTGTATAATGCCTGGAA+TGG | 0.662462 | 8_1:+59500873 | None:intergenic |
| TCTTGATGCACAGCATAAAG+GGG | 0.662787 | 8_1:-59502501 | Msa1204040:CDS |
| TGATATTGGCAGTGATGACA+AGG | 0.666015 | 8_1:-59503854 | Msa1204040:CDS |
| TTGTTGGTGAGAACAGAGAG+AGG | 0.669117 | 8_1:+59506332 | None:intergenic |
| TTGTCGGAACCAAAGACGCA+CGG | 0.676067 | 8_1:+59503391 | None:intergenic |
| ATTGTACCTACTAAGAAACC+GGG | 0.677949 | 8_1:-59500757 | Msa1204040:CDS |
| ATGCCAAAGAGAACTCGCAA+AGG | 0.678638 | 8_1:+59503884 | None:intergenic |
| TGATGCACAGCATAAAGGGG+CGG | 0.680634 | 8_1:-59502498 | Msa1204040:CDS |
| CACTTCAAAAGAAAATGGAG+AGG | 0.682330 | 8_1:-59505491 | Msa1204040:intron |
| AAAGGAGTGCATGGTGTGGG+AGG | 0.683313 | 8_1:-59504607 | Msa1204040:CDS |
| AGGGTGGTGATAGTAAGTGT+CGG | 0.685730 | 8_1:+59506374 | None:intergenic |
| GTAACCGTTTCCGAACCAGA+AGG | 0.688384 | 8_1:+59504250 | None:intergenic |
| GAAGTCCGAAATGTGATCAG+GGG | 0.700628 | 8_1:+59503585 | None:intergenic |
| AAGGTCTGGATGAAGCATTG+CGG | 0.708625 | 8_1:-59504767 | Msa1204040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAAAAAAAAAAAAGA+AGG | + | chr8_1:59500907-59500926 | None:intergenic | 10.0% |
| !! | AGATAAATAAATGAATAAAA+AGG | + | chr8_1:59501607-59501626 | None:intergenic | 10.0% |
| !! | GAAGAAATTAAAAATATTAA+AGG | - | chr8_1:59504202-59504221 | Msa1204040:CDS | 10.0% |
| !!! | TGTTTTATAAATTACAAATT+AGG | - | chr8_1:59504871-59504890 | Msa1204040:intron | 10.0% |
| !!! | GTTTTATAAATTACAAATTA+GGG | - | chr8_1:59504872-59504891 | Msa1204040:intron | 10.0% |
| !!! | TTTTAGAAGTTTTTATGAAA+TGG | - | chr8_1:59501155-59501174 | Msa1204040:CDS | 15.0% |
| !!! | TTTAGAAGTTTTTATGAAAT+GGG | - | chr8_1:59501156-59501175 | Msa1204040:CDS | 15.0% |
| !!! | TTATCATTTTCCAATTATTA+TGG | - | chr8_1:59501524-59501543 | Msa1204040:intron | 15.0% |
| !! | AAATAAATGAATAAAAAGGA+TGG | + | chr8_1:59501603-59501622 | None:intergenic | 15.0% |
| !!! | ATTCTTTCATTTTTTTTCTT+AGG | - | chr8_1:59501705-59501724 | Msa1204040:intron | 15.0% |
| !!! | TAACTTTTAATTTCTAATTG+AGG | - | chr8_1:59504615-59504634 | Msa1204040:CDS | 15.0% |
| !!! | TTTCATGTATTTTTTATTGA+AGG | - | chr8_1:59506345-59506364 | Msa1204040:five_prime_UTR | 15.0% |
| !!! | TTCATGTATTTTTTATTGAA+GGG | - | chr8_1:59506346-59506365 | Msa1204040:five_prime_UTR | 15.0% |
| !!! | TGTAAAAAGGTGTAAAAAAA+GGG | + | chr8_1:59500575-59500594 | None:intergenic | 20.0% |
| !! | ATGAAAATGTAAATGATGTT+TGG | + | chr8_1:59500770-59500789 | None:intergenic | 20.0% |
| !!! | CAATGTCTTTTATATATGAA+AGG | + | chr8_1:59500935-59500954 | None:intergenic | 20.0% |
| !! | TGTTAGTACTATACTTATAA+TGG | - | chr8_1:59500965-59500984 | Msa1204040:CDS | 20.0% |
| !!! | AACTTTTTTGAATTAGTTGT+TGG | - | chr8_1:59501003-59501022 | Msa1204040:CDS | 20.0% |
| !!! | TTTATTTAGTTTTGTTGTGT+TGG | - | chr8_1:59501041-59501060 | Msa1204040:CDS | 20.0% |
| !!! | TGTTTTTTTGTCTTTTTTTG+TGG | - | chr8_1:59501222-59501241 | Msa1204040:intron | 20.0% |
| !! | TTACAACATACCATAATAAT+TGG | + | chr8_1:59501537-59501556 | None:intergenic | 20.0% |
| !! | TTATATCATGATGATTACAT+TGG | - | chr8_1:59501567-59501586 | Msa1204040:intron | 20.0% |
| !! | AAAAAATGAAAGAATCTTCT+TGG | + | chr8_1:59501700-59501719 | None:intergenic | 20.0% |
| !! | ACTACTTGTGATAAAAATAA+TGG | - | chr8_1:59501781-59501800 | Msa1204040:intron | 20.0% |
| !! | CTACTTGTGATAAAAATAAT+GGG | - | chr8_1:59501782-59501801 | Msa1204040:intron | 20.0% |
| !!! | TATTTTTGGAGTTCTTTTAA+TGG | - | chr8_1:59502073-59502092 | Msa1204040:intron | 20.0% |
| !! | AAAAATGAAGTTGAAATGTT+AGG | - | chr8_1:59502726-59502745 | Msa1204040:CDS | 20.0% |
| !!! | TATTCCATAAGATTCTTTTA+AGG | + | chr8_1:59504365-59504384 | None:intergenic | 20.0% |
| !! | TGAAACAAATATTTGAAGAT+AGG | + | chr8_1:59504576-59504595 | None:intergenic | 20.0% |
| !! | TTCAAACTAATTTGAATAGA+AGG | - | chr8_1:59505077-59505096 | Msa1204040:CDS | 20.0% |
| !! | AATAAAAATTGATACCTAGA+TGG | + | chr8_1:59505368-59505387 | None:intergenic | 20.0% |
| !! | AATCAGAAGATAACAAAAAT+AGG | + | chr8_1:59505401-59505420 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTCATAACTTTCA+GGG | + | chr8_1:59505949-59505968 | None:intergenic | 20.0% |
| !! | GTGTAAAAAGGTGTAAAAAA+AGG | + | chr8_1:59500576-59500595 | None:intergenic | 25.0% |
| ! | TCTAAAGAAATATGAGATTG+AGG | + | chr8_1:59500865-59500884 | None:intergenic | 25.0% |
| ! | TCAATCTCATATTTCTTTAG+AGG | - | chr8_1:59500864-59500883 | Msa1204040:CDS | 25.0% |
| ! | AAAAAAAGAAGGAAAATAGC+AGG | + | chr8_1:59500896-59500915 | None:intergenic | 25.0% |
| !!! | TTGATGATTTGTTTTTTCTG+AGG | - | chr8_1:59501293-59501312 | Msa1204040:intron | 25.0% |
| ! | TTACATTCTTCTTAGCATTA+TGG | - | chr8_1:59501343-59501362 | Msa1204040:intron | 25.0% |
| !!! | ATTTTCTTTTGAAGTGAGAT+TGG | + | chr8_1:59501432-59501451 | None:intergenic | 25.0% |
| ! | AATCTCACTTCAAAAGAAAA+TGG | - | chr8_1:59501431-59501450 | Msa1204040:intron | 25.0% |
| ! | TCTAATTAATTCAGCACAAA+GGG | + | chr8_1:59501731-59501750 | None:intergenic | 25.0% |
| ! | ATCTAATTAATTCAGCACAA+AGG | + | chr8_1:59501732-59501751 | None:intergenic | 25.0% |
| ! | TAGATCATAAAATGTACGAA+AGG | - | chr8_1:59501747-59501766 | Msa1204040:intron | 25.0% |
| !!! | AAAATAATGGGTATGTTGTT+TGG | - | chr8_1:59501794-59501813 | Msa1204040:intron | 25.0% |
| !! | ATTAGAAAATAAGCTTGCTT+CGG | - | chr8_1:59501887-59501906 | Msa1204040:intron | 25.0% |
| ! | AATAAGCAAATAACCACTTA+TGG | - | chr8_1:59502044-59502063 | Msa1204040:intron | 25.0% |
| !!! | TTCATTTTTCATTTTTGCCA+GGG | + | chr8_1:59502715-59502734 | None:intergenic | 25.0% |
| !!! | AAAGTATCGATTCTTCTATT+GGG | + | chr8_1:59502837-59502856 | None:intergenic | 25.0% |
| ! | CATAATGAAGAATCATCTAA+AGG | - | chr8_1:59502990-59503009 | Msa1204040:CDS | 25.0% |
| ! | ATTCCTGAATTATTTACTGA+GGG | + | chr8_1:59503791-59503810 | None:intergenic | 25.0% |
| ! | CATCAAGAAACAATTTGATT+GGG | - | chr8_1:59504012-59504031 | Msa1204040:CDS | 25.0% |
| ! | CAATCCTTAAAAGAATCTTA+TGG | - | chr8_1:59504358-59504377 | Msa1204040:CDS | 25.0% |
| ! | AATATTCCAGAGTTTAACAT+AGG | + | chr8_1:59504786-59504805 | None:intergenic | 25.0% |
| !!! | CGAGATTTAACTTTTGTATA+GGG | + | chr8_1:59504833-59504852 | None:intergenic | 25.0% |
| !!! | TCGAGATTTAACTTTTGTAT+AGG | + | chr8_1:59504834-59504853 | None:intergenic | 25.0% |
| !! | GAGATATGTTAATGATTTGT+TGG | - | chr8_1:59505119-59505138 | Msa1204040:intron | 25.0% |
| !!! | ATATGTTAATGATTTGTTGG+TGG | - | chr8_1:59505122-59505141 | Msa1204040:intron | 25.0% |
| !!! | TATGTTAATGATTTGTTGGT+GGG | - | chr8_1:59505123-59505142 | Msa1204040:intron | 25.0% |
| ! | ATTCCTAATTGAAATAGTCT+TGG | - | chr8_1:59505213-59505232 | Msa1204040:intron | 25.0% |
| ! | TTTCACAGTGAAAACAAAAT+GGG | + | chr8_1:59505322-59505341 | None:intergenic | 25.0% |
| !! | TTTTCACAGTGAAAACAAAA+TGG | + | chr8_1:59505323-59505342 | None:intergenic | 25.0% |
| !! | CATTTAATTAGTTTCCATCT+AGG | - | chr8_1:59505351-59505370 | Msa1204040:intron | 25.0% |
| !! | TATCTAACAGTTTCTTGTTT+CGG | + | chr8_1:59505448-59505467 | None:intergenic | 25.0% |
| ! | TCCAGTATAATTGTAAATGA+TGG | - | chr8_1:59505496-59505515 | Msa1204040:CDS | 25.0% |
| ! | ACCATCATTTACAATTATAC+TGG | + | chr8_1:59505500-59505519 | None:intergenic | 25.0% |
| !!! | TTTTTAGTCAATCATACACA+TGG | + | chr8_1:59505639-59505658 | None:intergenic | 25.0% |
| ! | TGTCAAATTGAATTATGAGT+TGG | - | chr8_1:59505684-59505703 | Msa1204040:intron | 25.0% |
| ! | TGCAATAACATTGTCAAAAA+GGG | + | chr8_1:59505859-59505878 | None:intergenic | 25.0% |
| !!! | TTCTTTTTCATAACTTTCAG+GGG | + | chr8_1:59505948-59505967 | None:intergenic | 25.0% |
| !!! | GATTCTTTTTCATAACTTTC+AGG | + | chr8_1:59505950-59505969 | None:intergenic | 25.0% |
| ! | AAAAAGGTGTAAAAAAAGGG+TGG | + | chr8_1:59500572-59500591 | None:intergenic | 30.0% |
| TCTTGCTGATAAAGAAGAAT+TGG | - | chr8_1:59501848-59501867 | Msa1204040:intron | 30.0% | |
| ! | TTTTCATGTCCAAGTTTACA+AGG | + | chr8_1:59502026-59502045 | None:intergenic | 30.0% |
| AAAAATACTTCAGCCATAAG+TGG | + | chr8_1:59502060-59502079 | None:intergenic | 30.0% | |
| !! | ACTTATGGCTGAAGTATTTT+TGG | - | chr8_1:59502059-59502078 | Msa1204040:intron | 30.0% |
| GTGTTAAAATCTTGCTTTGA+AGG | - | chr8_1:59502099-59502118 | Msa1204040:intron | 30.0% | |
| !! | AAAATCTTGCTTTGAAGGTT+TGG | - | chr8_1:59502104-59502123 | Msa1204040:intron | 30.0% |
| TCAAAGAGAAAAATTGATCG+AGG | - | chr8_1:59502416-59502435 | Msa1204040:CDS | 30.0% | |
| !! | AGAAGCATTATCTTTCTCAA+TGG | + | chr8_1:59502505-59502524 | None:intergenic | 30.0% |
| CAAATTCTCTCTCTTCATTT+CGG | + | chr8_1:59502569-59502588 | None:intergenic | 30.0% | |
| !! | CTTCATTTTTCATTTTTGCC+AGG | + | chr8_1:59502716-59502735 | None:intergenic | 30.0% |
| ! | CTTGTTCCTTCTTATTTCAA+GGG | + | chr8_1:59502760-59502779 | None:intergenic | 30.0% |
| ! | ACTTGTTCCTTCTTATTTCA+AGG | + | chr8_1:59502761-59502780 | None:intergenic | 30.0% |
| GTTAAACTCAACTAGTTCAA+TGG | - | chr8_1:59502779-59502798 | Msa1204040:CDS | 30.0% | |
| !! | CAAAGTATCGATTCTTCTAT+TGG | + | chr8_1:59502838-59502857 | None:intergenic | 30.0% |
| ! | CTCATTCATTTTCCTACTTA+GGG | + | chr8_1:59502910-59502929 | None:intergenic | 30.0% |
| ! | AAAGCATTACTCTTGAGAAT+TGG | + | chr8_1:59502935-59502954 | None:intergenic | 30.0% |
| TGAAATGGAAAAATTTGCAG+TGG | - | chr8_1:59503226-59503245 | Msa1204040:CDS | 30.0% | |
| !! | AAAGAAGTTGATGAGATCAA+TGG | - | chr8_1:59503290-59503309 | Msa1204040:CDS | 30.0% |
| ! | GTTATCCTTTAGTTCATCAA+GGG | + | chr8_1:59503393-59503412 | None:intergenic | 30.0% |
| ! | TGTTATCCTTTAGTTCATCA+AGG | + | chr8_1:59503394-59503413 | None:intergenic | 30.0% |
| ATATTCTCGAGTATATCATC+AGG | + | chr8_1:59503482-59503501 | None:intergenic | 30.0% | |
| ! | AGAATATTAGAGTAGCTTTG+AGG | - | chr8_1:59503495-59503514 | Msa1204040:CDS | 30.0% |
| TGATCCTTCAAATAACTCTT+TGG | - | chr8_1:59503583-59503602 | Msa1204040:CDS | 30.0% | |
| GTAATATTTACATCACTGGA+TGG | + | chr8_1:59503617-59503636 | None:intergenic | 30.0% | |
| GTCAGTAATATTTACATCAC+TGG | + | chr8_1:59503621-59503640 | None:intergenic | 30.0% | |
| CATTCCTGAATTATTTACTG+AGG | + | chr8_1:59503792-59503811 | None:intergenic | 30.0% | |
| AAATAATTCAGGAATGCCAA+CGG | - | chr8_1:59503796-59503815 | Msa1204040:CDS | 30.0% | |
| ! | ATGTTTTCCATTGGAAAACA+CGG | + | chr8_1:59503832-59503851 | None:intergenic | 30.0% |
| GTGTGTTATGATTTACTGAA+TGG | - | chr8_1:59503887-59503906 | Msa1204040:CDS | 30.0% | |
| TTATGATTTACTGAATGGCA+AGG | - | chr8_1:59503892-59503911 | Msa1204040:CDS | 30.0% | |
| ! | CCAATCAAATTGTTTCTTGA+TGG | + | chr8_1:59504014-59504033 | None:intergenic | 30.0% |
| CCATCAAGAAACAATTTGAT+TGG | - | chr8_1:59504011-59504030 | Msa1204040:CDS | 30.0% | |
| TGAATCTCAAAAGGAAACAT+TGG | - | chr8_1:59504240-59504259 | Msa1204040:CDS | 30.0% | |
| AGAATCTTATGGAATACTTG+AGG | - | chr8_1:59504369-59504388 | Msa1204040:CDS | 30.0% | |
| !! | TGTCTTTCTGGTTAATATCA+TGG | + | chr8_1:59504692-59504711 | None:intergenic | 30.0% |
| ACTATGAGTCATTGAGAAAA+AGG | + | chr8_1:59504750-59504769 | None:intergenic | 30.0% | |
| TTCAATGCTTACTCCAAATT+GGG | + | chr8_1:59504900-59504919 | None:intergenic | 30.0% | |
| !! | TCTCTGAAACATACAATGTA+CGG | - | chr8_1:59504940-59504959 | Msa1204040:intron | 30.0% |
| TTGGAATTAAACATACCTAC+AGG | - | chr8_1:59505007-59505026 | Msa1204040:CDS | 30.0% | |
| TCTATAACTTCCAACTTTCA+AGG | - | chr8_1:59505171-59505190 | Msa1204040:intron | 30.0% | |
| ! | GTTTTTGTTACCTTGAAAGT+TGG | + | chr8_1:59505184-59505203 | None:intergenic | 30.0% |
| TCAAGGTAACAAAAACTTAC+AGG | - | chr8_1:59505188-59505207 | Msa1204040:intron | 30.0% | |
| ! | ATCTAACAGTTTCTTGTTTC+GGG | + | chr8_1:59505447-59505466 | None:intergenic | 30.0% |
| AAACATCAAACCTGAATTAG+GGG | + | chr8_1:59505568-59505587 | None:intergenic | 30.0% | |
| CAAACATCAAACCTGAATTA+GGG | + | chr8_1:59505569-59505588 | None:intergenic | 30.0% | |
| !!! | TATGAGTTGGTTTTTCATGT+TGG | - | chr8_1:59505697-59505716 | Msa1204040:intron | 30.0% |
| AAGAAACCATCCTTAATCTT+GGG | - | chr8_1:59505796-59505815 | Msa1204040:intron | 30.0% | |
| CTGCAATAACATTGTCAAAA+AGG | + | chr8_1:59505860-59505879 | None:intergenic | 30.0% | |
| TGAAGATGATACTAAATCCA+AGG | - | chr8_1:59505995-59506014 | Msa1204040:intron | 30.0% | |
| !!! | GTCACTTATTTTTGAAACCT+TGG | + | chr8_1:59506015-59506034 | None:intergenic | 30.0% |
| AAAGATAAAATCTTCTCCAG+AGG | + | chr8_1:59506077-59506096 | None:intergenic | 30.0% | |
| CATTGTAACTACTAAGAAAC+CGG | - | chr8_1:59506145-59506164 | Msa1204040:five_prime_UTR | 30.0% | |
| GTTTGTGGAAGAAGTTATTA+TGG | - | chr8_1:59506201-59506220 | Msa1204040:five_prime_UTR | 30.0% | |
| AGGGAAAGAAGTGAAAAGAT+GGG | + | chr8_1:59500665-59500684 | None:intergenic | 35.0% | |
| AAGGGAAAGAAGTGAAAAGA+TGG | + | chr8_1:59500666-59500685 | None:intergenic | 35.0% | |
| CACTTCAAAAGAAAATGGAG+AGG | - | chr8_1:59501436-59501455 | Msa1204040:intron | 35.0% | |
| !! | GGTTTGATTTTCCGTGTTTT+AGG | - | chr8_1:59501815-59501834 | Msa1204040:intron | 35.0% |
| TATTGTTCGCCTTGTAAACT+TGG | - | chr8_1:59502014-59502033 | Msa1204040:intron | 35.0% | |
| !! | AGCAAAAGTTGAAGTGTTGT+CGG | - | chr8_1:59502131-59502150 | Msa1204040:intron | 35.0% |
| ! | GATTTGTTCGAGAAGAACAA+AGG | - | chr8_1:59502253-59502272 | Msa1204040:CDS | 35.0% |
| GGCTTCAAAGGAATTTGAAA+AGG | - | chr8_1:59502302-59502321 | Msa1204040:intron | 35.0% | |
| AGTTAGCTGTGACAAGTAAA+AGG | - | chr8_1:59502346-59502365 | Msa1204040:intron | 35.0% | |
| AAGACAATTAACTCAAGCTG+AGG | - | chr8_1:59502446-59502465 | Msa1204040:CDS | 35.0% | |
| TAATGCTTCTCTGACATATG+AGG | - | chr8_1:59502515-59502534 | Msa1204040:CDS | 35.0% | |
| CGAAATGAAGAGAGAGAATT+TGG | - | chr8_1:59502567-59502586 | Msa1204040:CDS | 35.0% | |
| GAGATTCCCTTGAAATAAGA+AGG | - | chr8_1:59502751-59502770 | Msa1204040:CDS | 35.0% | |
| CGTTAAAAGATTCCCTAAGT+AGG | - | chr8_1:59502895-59502914 | Msa1204040:CDS | 35.0% | |
| ! | GCTCATTCATTTTCCTACTT+AGG | + | chr8_1:59502911-59502930 | None:intergenic | 35.0% |
| TTGGCATCAATGTCTGATAT+TGG | - | chr8_1:59503059-59503078 | Msa1204040:CDS | 35.0% | |
| !! | TTCTGCGTTGATTTCAGATT+CGG | - | chr8_1:59503118-59503137 | Msa1204040:CDS | 35.0% |
| CTTCAGAAGTGGAAAACAAA+AGG | - | chr8_1:59503145-59503164 | Msa1204040:CDS | 35.0% | |
| GTGGAAAACAAAAGGAATCA+TGG | - | chr8_1:59503153-59503172 | Msa1204040:CDS | 35.0% | |
| AGCTTCAGACATAAATCTCA+TGG | - | chr8_1:59503193-59503212 | Msa1204040:CDS | 35.0% | |
| CATGGATGACTTTGTTGAAA+TGG | - | chr8_1:59503211-59503230 | Msa1204040:CDS | 35.0% | |
| ATCTTCCCTTGATGAACTAA+AGG | - | chr8_1:59503385-59503404 | Msa1204040:CDS | 35.0% | |
| TAAAGGATAACATTCCCAGT+TGG | - | chr8_1:59503402-59503421 | Msa1204040:CDS | 35.0% | |
| GGATGTAGTAAAAATGATCC+TGG | - | chr8_1:59503430-59503449 | Msa1204040:CDS | 35.0% | |
| AATATGACCAGAGACTTTGT+CGG | + | chr8_1:59503555-59503574 | None:intergenic | 35.0% | |
| AAAGTCTCTGGTCATATTGA+AGG | - | chr8_1:59503557-59503576 | Msa1204040:CDS | 35.0% | |
| TCCTTCAAATAACTCTTTGG+TGG | - | chr8_1:59503586-59503605 | Msa1204040:CDS | 35.0% | |
| ACCACCAAAGAGTTATTTGA+AGG | + | chr8_1:59503590-59503609 | None:intergenic | 35.0% | |
| !! | TGCTGTTTGGTTCTCTTTAT+TGG | + | chr8_1:59503650-59503669 | None:intergenic | 35.0% |
| !! | TCTTTCCTATTGACTTACTC+AGG | + | chr8_1:59503685-59503704 | None:intergenic | 35.0% |
| GTACCCTCAGTAAATAATTC+AGG | - | chr8_1:59503785-59503804 | Msa1204040:CDS | 35.0% | |
| AATAATTCAGGAATGCCAAC+GGG | - | chr8_1:59503797-59503816 | Msa1204040:CDS | 35.0% | |
| ! | TGAGTTCAGATGTTTTCCAT+TGG | + | chr8_1:59503841-59503860 | None:intergenic | 35.0% |
| TGAAGAACTAACAACAGCTT+TGG | - | chr8_1:59503934-59503953 | Msa1204040:CDS | 35.0% | |
| !! | AACTAACAACAGCTTTGGAT+TGG | - | chr8_1:59503939-59503958 | Msa1204040:CDS | 35.0% |
| !! | GAATCACTGTTTTTCACTTC+AGG | - | chr8_1:59503967-59503986 | Msa1204040:CDS | 35.0% |
| TCAGGATGTTTCTTGTATGA+AGG | - | chr8_1:59503985-59504004 | Msa1204040:CDS | 35.0% | |
| AAAACATGGAAACTGTTCTG+CGG | + | chr8_1:59504113-59504132 | None:intergenic | 35.0% | |
| GTAGTTACTTGAGGAAAACA+TGG | + | chr8_1:59504127-59504146 | None:intergenic | 35.0% | |
| ! | CCATTTGAAGTAGTTACTTG+AGG | + | chr8_1:59504136-59504155 | None:intergenic | 35.0% |
| CCTCAAGTAACTACTTCAAA+TGG | - | chr8_1:59504133-59504152 | Msa1204040:CDS | 35.0% | |
| GATCAATGCTGAATCTCAAA+AGG | - | chr8_1:59504231-59504250 | Msa1204040:CDS | 35.0% | |
| TCTCAAAAGGAAACATTGGA+AGG | - | chr8_1:59504244-59504263 | Msa1204040:CDS | 35.0% | |
| CTCAAAAGGAAACATTGGAA+GGG | - | chr8_1:59504245-59504264 | Msa1204040:CDS | 35.0% | |
| TGATAGGATTGAGTCCTTAA+CGG | - | chr8_1:59504285-59504304 | Msa1204040:CDS | 35.0% | |
| ! | TTCCAAAAGTTGATCCGTTA+AGG | + | chr8_1:59504302-59504321 | None:intergenic | 35.0% |
| ATCTTGATGCACAGCATAAA+GGG | - | chr8_1:59504425-59504444 | Msa1204040:CDS | 35.0% | |
| !!! | CAAGGTTTTGGAATTAGAAG+TGG | - | chr8_1:59504471-59504490 | Msa1204040:CDS | 35.0% |
| TCTCTAATTCTTCACAACTG+TGG | + | chr8_1:59504513-59504532 | None:intergenic | 35.0% | |
| GATAAACTTACAGTTCGCAA+TGG | + | chr8_1:59504717-59504736 | None:intergenic | 35.0% | |
| CTAGTTCCTATGTTAAACTC+TGG | - | chr8_1:59504777-59504796 | Msa1204040:CDS | 35.0% | |
| ACAAATTAGGGATCCCAATT+TGG | - | chr8_1:59504884-59504903 | Msa1204040:intron | 35.0% | |
| GTTCAATGCTTACTCCAAAT+TGG | + | chr8_1:59504901-59504920 | None:intergenic | 35.0% | |
| AATTCCAATCATCTACCAGA+AGG | + | chr8_1:59504995-59505014 | None:intergenic | 35.0% | |
| CACATAATATCGAAGAACCA+AGG | + | chr8_1:59505039-59505058 | None:intergenic | 35.0% | |
| CCAAACATCAAACCTGAATT+AGG | + | chr8_1:59505570-59505589 | None:intergenic | 35.0% | |
| ! | CCTAATTCAGGTTTGATGTT+TGG | - | chr8_1:59505567-59505586 | Msa1204040:CDS | 35.0% |
| TCATACACATGGAGATAAGT+AGG | + | chr8_1:59505628-59505647 | None:intergenic | 35.0% | |
| CAAGAAACCATCCTTAATCT+TGG | - | chr8_1:59505795-59505814 | Msa1204040:intron | 35.0% | |
| !! | ATTCGTTTTTGTTGTCGTGA+TGG | + | chr8_1:59505913-59505932 | None:intergenic | 35.0% |
| ! | CAGTGTTACTGCTAATGATT+TGG | - | chr8_1:59506121-59506140 | Msa1204040:five_prime_UTR | 35.0% |
| CGGTTTCTTAGTAGTTACAA+TGG | + | chr8_1:59506147-59506166 | None:intergenic | 35.0% | |
| CATTGTACCTACTAAGAAAC+CGG | - | chr8_1:59506169-59506188 | Msa1204040:five_prime_UTR | 35.0% | |
| ATTGTACCTACTAAGAAACC+GGG | - | chr8_1:59506170-59506189 | Msa1204040:five_prime_UTR | 35.0% | |
| ! | CTTTCAAGTGTTCAATGGAA+GGG | + | chr8_1:59506258-59506277 | None:intergenic | 35.0% |
| ! | ACTTTCAAGTGTTCAATGGA+AGG | + | chr8_1:59506259-59506278 | None:intergenic | 35.0% |
| ! | TGAGACTTTCAAGTGTTCAA+TGG | + | chr8_1:59506263-59506282 | None:intergenic | 35.0% |
| ! | TTTTATTGAAGGGACTTGTC+TGG | - | chr8_1:59506356-59506375 | Msa1204040:five_prime_UTR | 35.0% |
| !!! | TGTCGGCTTGGTTGTTTTAT+TGG | + | chr8_1:59500539-59500558 | None:intergenic | 40.0% |
| ! | GAACAGAGAGAGGTGTAAAA+AGG | + | chr8_1:59500588-59500607 | None:intergenic | 40.0% |
| TGGGAGTCAAGAGAAAATGA+CGG | + | chr8_1:59500631-59500650 | None:intergenic | 40.0% | |
| AAGATGGGAAAGTGAAGAGT+GGG | + | chr8_1:59500650-59500669 | None:intergenic | 40.0% | |
| AAAGATGGGAAAGTGAAGAG+TGG | + | chr8_1:59500651-59500670 | None:intergenic | 40.0% | |
| TTGGTGAGAGAAAGGGAAAA+GGG | + | chr8_1:59500684-59500703 | None:intergenic | 40.0% | |
| TTTGGTGAGAGAAAGGGAAA+AGG | + | chr8_1:59500685-59500704 | None:intergenic | 40.0% | |
| ! | TGTGTGTTTGGTGAGAGAAA+GGG | + | chr8_1:59500691-59500710 | None:intergenic | 40.0% |
| CCTGGTTCACACTAAAATGA+TGG | + | chr8_1:59501089-59501108 | None:intergenic | 40.0% | |
| !! | CCATCATTTTAGTGTGAACC+AGG | - | chr8_1:59501086-59501105 | Msa1204040:CDS | 40.0% |
| ! | GTATCCTCTGTAGTTCTACT+CGG | - | chr8_1:59501108-59501127 | Msa1204040:CDS | 40.0% |
| GCATTATGGATCAAAAACCG+TGG | - | chr8_1:59501357-59501376 | Msa1204040:intron | 40.0% | |
| !! | TCTGATGACTTTTTCCTCCA+AGG | + | chr8_1:59501383-59501402 | None:intergenic | 40.0% |
| AAGCGTGTGTACCTAAAACA+CGG | + | chr8_1:59501829-59501848 | None:intergenic | 40.0% | |
| ! | GTGTAATTCTAAAGACGAGC+TGG | - | chr8_1:59501920-59501939 | Msa1204040:intron | 40.0% |
| TAAAATTGCGCAAGAAGCAG+TGG | - | chr8_1:59501956-59501975 | Msa1204040:intron | 40.0% | |
| TGAAGAAAGAGTAGCCCATT+TGG | - | chr8_1:59502197-59502216 | Msa1204040:intron | 40.0% | |
| CTTAAGAGCTCCATCCAAAT+GGG | + | chr8_1:59502214-59502233 | None:intergenic | 40.0% | |
| TTCGAGAAGAACAAAGGCAA+AGG | - | chr8_1:59502259-59502278 | Msa1204040:CDS | 40.0% | |
| GATTCATGATGCTGTGATGA+AGG | - | chr8_1:59502281-59502300 | Msa1204040:intron | 40.0% | |
| ! | GGAATTTGAAAAGGAGTGCA+TGG | - | chr8_1:59502311-59502330 | Msa1204040:intron | 40.0% |
| AAGAGAGAGAATTTGGTCGT+CGG | - | chr8_1:59502574-59502593 | Msa1204040:CDS | 40.0% | |
| CTGACACTCTGATTCTAACT+TGG | + | chr8_1:59502649-59502668 | None:intergenic | 40.0% | |
| !!! | CGCTTTGTTTTCTTCTTCGA+CGG | + | chr8_1:59502877-59502896 | None:intergenic | 40.0% |
| ! | ATCTAAAGGTCAAGTTGCTG+TGG | - | chr8_1:59503004-59503023 | Msa1204040:CDS | 40.0% |
| TAACCTTTGCGAGTTCTCTT+TGG | - | chr8_1:59503040-59503059 | Msa1204040:CDS | 40.0% | |
| TGATATTGGCAGTGATGACA+AGG | - | chr8_1:59503073-59503092 | Msa1204040:CDS | 40.0% | |
| GAGAAAGACACTGAAATCTC+TGG | - | chr8_1:59503257-59503276 | Msa1204040:CDS | 40.0% | |
| TCAATGGCTTCTCAGAAACT+AGG | - | chr8_1:59503306-59503325 | Msa1204040:CDS | 40.0% | |
| AGAAGTCCGAAATGTGATCA+GGG | + | chr8_1:59503346-59503365 | None:intergenic | 40.0% | |
| ! | CAGGATTTTTGTGAGTGACA+TGG | + | chr8_1:59503463-59503482 | None:intergenic | 40.0% |
| TGGTTCTCTTTATTGGTGAG+AGG | + | chr8_1:59503643-59503662 | None:intergenic | 40.0% | |
| GAAGACCTGAGTAAGTCAAT+AGG | - | chr8_1:59503677-59503696 | Msa1204040:CDS | 40.0% | |
| GAATTATCACAATCCACAGC+AGG | + | chr8_1:59503737-59503756 | None:intergenic | 40.0% | |
| GTCTCATCACTTGTGCATAA+GGG | + | chr8_1:59503764-59503783 | None:intergenic | 40.0% | |
| AGTCTCATCACTTGTGCATA+AGG | + | chr8_1:59503765-59503784 | None:intergenic | 40.0% | |
| !! | GGATGATAGGTCATTTTGCA+GGG | - | chr8_1:59504068-59504087 | Msa1204040:CDS | 40.0% |
| !! | GATGATAGGTCATTTTGCAG+GGG | - | chr8_1:59504069-59504088 | Msa1204040:CDS | 40.0% |
| AAACATGGAAACTGTTCTGC+GGG | + | chr8_1:59504112-59504131 | None:intergenic | 40.0% | |
| TCGAGAGATGTATTCTGATG+AGG | - | chr8_1:59504177-59504196 | Msa1204040:CDS | 40.0% | |
| AAAAGGAAACATTGGAAGGG+CGG | - | chr8_1:59504248-59504267 | Msa1204040:CDS | 40.0% | |
| !! | GTCCTTAACGGATCAACTTT+TGG | - | chr8_1:59504297-59504316 | Msa1204040:CDS | 40.0% |
| GATCTTGATGCACAGCATAA+AGG | - | chr8_1:59504424-59504443 | Msa1204040:CDS | 40.0% | |
| TCTTGATGCACAGCATAAAG+GGG | - | chr8_1:59504426-59504445 | Msa1204040:CDS | 40.0% | |
| TAAAGGGGCGGAATTAAAAG+AGG | - | chr8_1:59504441-59504460 | Msa1204040:CDS | 40.0% | |
| ATTAAAAGAGGTCGGTCTCA+AGG | - | chr8_1:59504453-59504472 | Msa1204040:CDS | 40.0% | |
| AGAATTAGAGACCAGATGTC+TGG | - | chr8_1:59504522-59504541 | Msa1204040:CDS | 40.0% | |
| AATTGCAACTCCAGCTTGAA+AGG | - | chr8_1:59504545-59504564 | Msa1204040:CDS | 40.0% | |
| ATAGGACTTACCTTTCAAGC+TGG | + | chr8_1:59504558-59504577 | None:intergenic | 40.0% | |
| GGCATGCTGAGAACATTAAT+TGG | + | chr8_1:59504654-59504673 | None:intergenic | 40.0% | |
| TAATGTTCTCAGCATGCCAA+AGG | - | chr8_1:59504656-59504675 | Msa1204040:CDS | 40.0% | |
| GATATTGCTGCACCAAGATT+TGG | - | chr8_1:59504967-59504986 | Msa1204040:intron | 40.0% | |
| TACCAGAAGGAACCAAATCT+TGG | + | chr8_1:59504982-59505001 | None:intergenic | 40.0% | |
| GCGCCAAGACTATTTCAATT+AGG | + | chr8_1:59505219-59505238 | None:intergenic | 40.0% | |
| !! | TTAATTCTGAAGCTGCCTCT+AGG | + | chr8_1:59505293-59505312 | None:intergenic | 40.0% |
| ! | TCTTGTTTCGGGCATATTAG+AGG | + | chr8_1:59505436-59505455 | None:intergenic | 40.0% |
| CAGGTTTGATGTTTGGAGAT+TGG | - | chr8_1:59505574-59505593 | Msa1204040:exon | 40.0% | |
| AGATTGGCAATCGACAAGTT+AGG | - | chr8_1:59505590-59505609 | Msa1204040:intron | 40.0% | |
| GATTGGCAATCGACAAGTTA+GGG | - | chr8_1:59505591-59505610 | Msa1204040:intron | 40.0% | |
| !! | AGAGTGTTGCTAAATCCTAC+AGG | - | chr8_1:59505731-59505750 | Msa1204040:intron | 40.0% |
| TTGCTAAATCCTACAGGACT+TGG | - | chr8_1:59505737-59505756 | Msa1204040:intron | 40.0% | |
| TCAAAAAGGGATGCATCCTT+TGG | + | chr8_1:59505846-59505865 | None:intergenic | 40.0% | |
| TTGTATAATGCCTGGAATGG+TGG | + | chr8_1:59506054-59506073 | None:intergenic | 40.0% | |
| AGGTTGTATAATGCCTGGAA+TGG | + | chr8_1:59506057-59506076 | None:intergenic | 40.0% | |
| TTAGCAGTAACACTGTCATC+TGG | + | chr8_1:59506116-59506135 | None:intergenic | 40.0% | |
| TTCTTAGTAGGTACAATGGC+CGG | + | chr8_1:59506167-59506186 | None:intergenic | 40.0% | |
| CGGTTTCTTAGTAGGTACAA+TGG | + | chr8_1:59506171-59506190 | None:intergenic | 40.0% | |
| ! | TGGAAGGGATGTTTTCATGT+TGG | + | chr8_1:59506243-59506262 | None:intergenic | 40.0% |
| AGGGTGGTGATAGTAAGTGT+CGG | + | chr8_1:59500556-59500575 | None:intergenic | 45.0% | |
| ! | TTGTTGGTGAGAACAGAGAG+AGG | + | chr8_1:59500598-59500617 | None:intergenic | 45.0% |
| ! | GTGTGTGTTTGGTGAGAGAA+AGG | + | chr8_1:59500692-59500711 | None:intergenic | 45.0% |
| ! | CAACAGAGAGAGTGTGTGTT+TGG | + | chr8_1:59500703-59500722 | None:intergenic | 45.0% |
| GTAGAACTACAGAGGATACC+TGG | + | chr8_1:59501107-59501126 | None:intergenic | 45.0% | |
| !! | AAGGTCTGGATGAAGCATTG+CGG | - | chr8_1:59502160-59502179 | Msa1204040:intron | 45.0% |
| GAAAGAGTAGCCCATTTGGA+TGG | - | chr8_1:59502201-59502220 | Msa1204040:intron | 45.0% | |
| CCTTAAGAGCTCCATCCAAA+TGG | + | chr8_1:59502215-59502234 | None:intergenic | 45.0% | |
| CCATTTGGATGGAGCTCTTA+AGG | - | chr8_1:59502212-59502231 | Msa1204040:intron | 45.0% | |
| TGCTGTGATGAAGGCTTCAA+AGG | - | chr8_1:59502290-59502309 | Msa1204040:intron | 45.0% | |
| ! | TTGAAAAGGAGTGCATGGTG+TGG | - | chr8_1:59502316-59502335 | Msa1204040:intron | 45.0% |
| ! | TGAAAAGGAGTGCATGGTGT+GGG | - | chr8_1:59502317-59502336 | Msa1204040:intron | 45.0% |
| AGCTGTGACAAGTAAAAGGC+TGG | - | chr8_1:59502350-59502369 | Msa1204040:intron | 45.0% | |
| !! | CCAACTCCTTTTCAAGCACT+CGG | + | chr8_1:59502542-59502561 | None:intergenic | 45.0% |
| !! | TTCATTTTTGCCAGGGAACC+AGG | + | chr8_1:59502708-59502727 | None:intergenic | 45.0% |
| TCTTCACTTGACAGTTCTCC+TGG | - | chr8_1:59502807-59502826 | Msa1204040:CDS | 45.0% | |
| CTTCACTTGACAGTTCTCCT+GGG | - | chr8_1:59502808-59502827 | Msa1204040:CDS | 45.0% | |
| ATTCTTCTATTGGGAGTCCC+AGG | + | chr8_1:59502828-59502847 | None:intergenic | 45.0% | |
| ATGCCAAAGAGAACTCGCAA+AGG | + | chr8_1:59503046-59503065 | None:intergenic | 45.0% | |
| GACTACCCCTGATCACATTT+CGG | - | chr8_1:59503337-59503356 | Msa1204040:CDS | 45.0% | |
| GAAGTCCGAAATGTGATCAG+GGG | + | chr8_1:59503345-59503364 | None:intergenic | 45.0% | |
| GAGAAGTCCGAAATGTGATC+AGG | + | chr8_1:59503347-59503366 | None:intergenic | 45.0% | |
| ! | TAACATTCCCAGTTGGCTTC+AGG | - | chr8_1:59503409-59503428 | Msa1204040:CDS | 45.0% |
| ACTACATCCTGAAGCCAACT+GGG | + | chr8_1:59503419-59503438 | None:intergenic | 45.0% | |
| TACTACATCCTGAAGCCAAC+TGG | + | chr8_1:59503420-59503439 | None:intergenic | 45.0% | |
| !!! | GAGTGACATGGTTTTGTTCC+AGG | + | chr8_1:59503451-59503470 | None:intergenic | 45.0% |
| AATCTAGATCCGTGCGTCTT+TGG | - | chr8_1:59503527-59503546 | Msa1204040:CDS | 45.0% | |
| ! | TTTGGTTCCGACAAAGTCTC+TGG | - | chr8_1:59503545-59503564 | Msa1204040:CDS | 45.0% |
| !! | GTCTTCATGAGCTTGCTGTT+TGG | + | chr8_1:59503663-59503682 | None:intergenic | 45.0% |
| AAGAATCAACTTGCCTGCTG+TGG | - | chr8_1:59503721-59503740 | Msa1204040:CDS | 45.0% | |
| ! | ACATGGTCCGTGTTTTCCAA+TGG | - | chr8_1:59503822-59503841 | Msa1204040:CDS | 45.0% |
| AGCGAAAGTGAAGCAGAGTT+TGG | - | chr8_1:59504046-59504065 | Msa1204040:CDS | 45.0% | |
| GCGAAAGTGAAGCAGAGTTT+GGG | - | chr8_1:59504047-59504066 | Msa1204040:CDS | 45.0% | |
| ! | GAAGCAGAGTTTGGGATGAT+AGG | - | chr8_1:59504055-59504074 | Msa1204040:CDS | 45.0% |
| !! | GGGATGATAGGTCATTTTGC+AGG | - | chr8_1:59504067-59504086 | Msa1204040:CDS | 45.0% |
| GGCTTCAATCAGCTACTGAT+AGG | - | chr8_1:59504269-59504288 | Msa1204040:CDS | 45.0% | |
| GAGTTGCAATTCCAGACATC+TGG | + | chr8_1:59504536-59504555 | None:intergenic | 45.0% | |
| ! | TTCGCAATGGCTTGTCTTTC+TGG | + | chr8_1:59504704-59504723 | None:intergenic | 45.0% |
| ! | CACCAAGATTTGGTTCCTTC+TGG | - | chr8_1:59504977-59504996 | Msa1204040:CDS | 45.0% |
| GGTTCCTTCTGGTAGATGAT+TGG | - | chr8_1:59504988-59505007 | Msa1204040:CDS | 45.0% | |
| ! | GAAATAGTCTTGGCGCAAGT+TGG | - | chr8_1:59505223-59505242 | Msa1204040:intron | 45.0% |
| CAGTGAGAGTCATATTACCG+TGG | + | chr8_1:59505252-59505271 | None:intergenic | 45.0% | |
| GTCTACATAGAAGCTCCTAG+AGG | - | chr8_1:59505275-59505294 | Msa1204040:intron | 45.0% | |
| GAAATCGAAGCCCCTAATTC+AGG | - | chr8_1:59505555-59505574 | Msa1204040:CDS | 45.0% | |
| CTGTTATCTCCAAGTCCTGT+AGG | + | chr8_1:59505749-59505768 | None:intergenic | 45.0% | |
| AACAGCCGCTTCAGAAAAGT+TGG | - | chr8_1:59505764-59505783 | Msa1204040:intron | 45.0% | |
| !! | CTCTGCCAACTTTTCTGAAG+CGG | + | chr8_1:59505772-59505791 | None:intergenic | 45.0% |
| CTGCTTCCCAAGATTAAGGA+TGG | + | chr8_1:59505805-59505824 | None:intergenic | 45.0% | |
| TCAGCTGCTTCCCAAGATTA+AGG | + | chr8_1:59505809-59505828 | None:intergenic | 45.0% | |
| TTAATCTTGGGAAGCAGCTG+AGG | - | chr8_1:59505808-59505827 | Msa1204040:intron | 45.0% | |
| AAAAGGGATGCATCCTTTGG+TGG | + | chr8_1:59505843-59505862 | None:intergenic | 45.0% | |
| !!! | TTTTGTTGTCGTGATGGTGG+TGG | + | chr8_1:59505907-59505926 | None:intergenic | 45.0% |
| !! | CGTTTTTGTTGTCGTGATGG+TGG | + | chr8_1:59505910-59505929 | None:intergenic | 45.0% |
| TCATAACTTTCAGGGGAGCA+GGG | + | chr8_1:59505941-59505960 | None:intergenic | 45.0% | |
| TTCATAACTTTCAGGGGAGC+AGG | + | chr8_1:59505942-59505961 | None:intergenic | 45.0% | |
| TCCAGGCATTATACAACCTC+TGG | - | chr8_1:59506058-59506077 | Msa1204040:intron | 45.0% | |
| TCCAGAGGTTGTATAATGCC+TGG | + | chr8_1:59506062-59506081 | None:intergenic | 45.0% | |
| !! | GGTGATAGTAAGTGTCGGCT+TGG | + | chr8_1:59500551-59500570 | None:intergenic | 50.0% |
| TGACGGAGTGAGTGTGTTGT+TGG | + | chr8_1:59500614-59500633 | None:intergenic | 50.0% | |
| TGGATCAAAAACCGTGGCCT+TGG | - | chr8_1:59501363-59501382 | Msa1204040:intron | 50.0% | |
| ! | ATCAAAAACCGTGGCCTTGG+AGG | - | chr8_1:59501366-59501385 | Msa1204040:intron | 50.0% |
| !! | GACTTTTTCCTCCAAGGCCA+CGG | + | chr8_1:59501377-59501396 | None:intergenic | 50.0% |
| !! | GAAGTGTTGTCGGTGAAGCA+AGG | - | chr8_1:59502141-59502160 | Msa1204040:intron | 50.0% |
| !! | AGGTCTGGATGAAGCATTGC+GGG | - | chr8_1:59502161-59502180 | Msa1204040:intron | 50.0% |
| !! | TGAAGCATTGCGGGACAGAT+TGG | - | chr8_1:59502170-59502189 | Msa1204040:intron | 50.0% |
| TGAGGTCCGAGTGCTTGAAA+AGG | - | chr8_1:59502533-59502552 | Msa1204040:CDS | 50.0% | |
| CCGAGTGCTTGAAAAGGAGT+TGG | - | chr8_1:59502539-59502558 | Msa1204040:CDS | 50.0% | |
| ! | AGAGATTGCGCCTTCTGGTT+CGG | - | chr8_1:59502667-59502686 | Msa1204040:CDS | 50.0% |
| GTAACCGTTTCCGAACCAGA+AGG | + | chr8_1:59502680-59502699 | None:intergenic | 50.0% | |
| TGAAATCAACGCAGAAGCCG+AGG | + | chr8_1:59503114-59503133 | None:intergenic | 50.0% | |
| ! | GATTCGGAGCACTTCAGAAG+TGG | - | chr8_1:59503134-59503153 | Msa1204040:CDS | 50.0% |
| ! | TCATGGTCCTGCAGAAGCAT+TGG | - | chr8_1:59503170-59503189 | Msa1204040:CDS | 50.0% |
| TGAAGCTCCAATGCTTCTGC+AGG | + | chr8_1:59503180-59503199 | None:intergenic | 50.0% | |
| TTGTCGGAACCAAAGACGCA+CGG | + | chr8_1:59503539-59503558 | None:intergenic | 50.0% | |
| TGATGCACAGCATAAAGGGG+CGG | - | chr8_1:59504429-59504448 | Msa1204040:CDS | 50.0% | |
| GGGGCGGAATTAAAAGAGGT+CGG | - | chr8_1:59504445-59504464 | Msa1204040:CDS | 50.0% | |
| ! | AGAGGTCGGTCTCAAGGTTT+TGG | - | chr8_1:59504459-59504478 | Msa1204040:CDS | 50.0% |
| TGTTCTCAGCATGCCAAAGG+AGG | - | chr8_1:59504659-59504678 | Msa1204040:CDS | 50.0% | |
| GTTCTCAGCATGCCAAAGGA+GGG | - | chr8_1:59504660-59504679 | Msa1204040:CDS | 50.0% | |
| TCATGGTTTGAGCCCTCCTT+TGG | + | chr8_1:59504675-59504694 | None:intergenic | 50.0% | |
| ATACCTACAGGCTACTGCCT+TGG | - | chr8_1:59505019-59505038 | Msa1204040:CDS | 50.0% | |
| !! | TTGGCGCAAGTTGGTTTCCA+CGG | - | chr8_1:59505232-59505251 | Msa1204040:intron | 50.0% |
| !! | GTGGTGGATGTGGTACTGAT+AGG | + | chr8_1:59505888-59505907 | None:intergenic | 50.0% |
| ! | TGGTGGTGAGATCAGAGTCA+CGG | + | chr8_1:59506037-59506056 | None:intergenic | 50.0% |
| TCTGATCTCACCACCATTCC+AGG | - | chr8_1:59506041-59506060 | Msa1204040:intron | 50.0% | |
| CCTACTAAGAAACCGGGAAG+CGG | - | chr8_1:59506176-59506195 | Msa1204040:five_prime_UTR | 50.0% | |
| TTCCACAAACTTCCGCTTCC+CGG | + | chr8_1:59506191-59506210 | None:intergenic | 50.0% | |
| CGAGCCGAGTAGAACTACAG+AGG | + | chr8_1:59501115-59501134 | None:intergenic | 55.0% | |
| ATTGCGCAAGAAGCAGTGGC+AGG | - | chr8_1:59501960-59501979 | Msa1204040:intron | 55.0% | |
| GTTGTCGGTGAAGCAAGGTC+TGG | - | chr8_1:59502146-59502165 | Msa1204040:intron | 55.0% | |
| ! | AAAGGAGTGCATGGTGTGGG+AGG | - | chr8_1:59502320-59502339 | Msa1204040:intron | 55.0% |
| GTGTCAGAGATTGCGCCTTC+TGG | - | chr8_1:59502662-59502681 | Msa1204040:CDS | 55.0% | |
| !! | TGCGCCTTCTGGTTCGGAAA+CGG | - | chr8_1:59502673-59502692 | Msa1204040:CDS | 55.0% |
| !! | CTGGTTCGGAAACGGTTACC+AGG | - | chr8_1:59502681-59502700 | Msa1204040:CDS | 55.0% |
| ! | AGGTCAAGTTGCTGTGGAGC+AGG | - | chr8_1:59503010-59503029 | Msa1204040:CDS | 55.0% |
| !! | GGTTAGCTGTGCTGACTCCT+CGG | - | chr8_1:59503094-59503113 | Msa1204040:CDS | 55.0% |
| !! | AGGAATGCCAACGGGCTACA+TGG | - | chr8_1:59503805-59503824 | Msa1204040:CDS | 55.0% |
| GAACCAAGGCAGTAGCCTGT+AGG | + | chr8_1:59505025-59505044 | None:intergenic | 55.0% | |
| TGGGAAGCAGCTGAGGTCAT+TGG | - | chr8_1:59505815-59505834 | Msa1204040:intron | 55.0% | |
| !! | GAGGTCATTGGCTCCACCAA+AGG | - | chr8_1:59505827-59505846 | Msa1204040:intron | 55.0% |
| !! | TGTTGTCGTGATGGTGGTGG+TGG | + | chr8_1:59505904-59505923 | None:intergenic | 55.0% |
| ACTTTCAGGGGAGCAGGGAT+AGG | + | chr8_1:59505936-59505955 | None:intergenic | 55.0% | |
| CCGCTTCCCGGTTTCTTAGT+AGG | + | chr8_1:59506179-59506198 | None:intergenic | 55.0% | |
| AACCGGGAAGCGGAAGTTTG+TGG | - | chr8_1:59506186-59506205 | Msa1204040:five_prime_UTR | 55.0% | |
| CGGAAACGGTTACCAGGTCC+TGG | - | chr8_1:59502687-59502706 | Msa1204040:CDS | 60.0% | |
| GTTACCAGGTCCTGGTTCCC+TGG | - | chr8_1:59502695-59502714 | Msa1204040:CDS | 60.0% | |
| TTTGCCAGGGAACCAGGACC+TGG | + | chr8_1:59502702-59502721 | None:intergenic | 60.0% | |
| ACACGGACCATGTAGCCCGT+TGG | + | chr8_1:59503815-59503834 | None:intergenic | 60.0% | |
| !! | CGTGATGGTGGTGGTGGATG+TGG | + | chr8_1:59505898-59505917 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 59500522 | 59506427 | 59500522 | ID=Msa1204040;Name=Msa1204040 |
| chr8_1 | mRNA | 59500522 | 59506427 | 59500522 | ID=Msa1204040-mRNA-1;Parent=Msa1204040;Name=Msa1204040-mRNA-1;_AED=0.04;_eAED=0.04;_QI=383|1|1|1|0.8|0.66|6|153|1088 |
| chr8_1 | exon | 59500522 | 59501196 | 59500522 | ID=Msa1204040-mRNA-1:exon:19243;Parent=Msa1204040-mRNA-1 |
| chr8_1 | exon | 59502224 | 59502281 | 59502224 | ID=Msa1204040-mRNA-1:exon:19242;Parent=Msa1204040-mRNA-1 |
| chr8_1 | exon | 59502383 | 59504828 | 59502383 | ID=Msa1204040-mRNA-1:exon:19241;Parent=Msa1204040-mRNA-1 |
| chr8_1 | exon | 59504968 | 59505112 | 59504968 | ID=Msa1204040-mRNA-1:exon:19240;Parent=Msa1204040-mRNA-1 |
| chr8_1 | exon | 59505492 | 59505606 | 59505492 | ID=Msa1204040-mRNA-1:exon:19239;Parent=Msa1204040-mRNA-1 |
| chr8_1 | exon | 59506064 | 59506427 | 59506064 | ID=Msa1204040-mRNA-1:exon:19238;Parent=Msa1204040-mRNA-1 |
| chr8_1 | five_prime_UTR | 59506064 | 59506427 | 59506064 | ID=Msa1204040-mRNA-1:five_prime_utr;Parent=Msa1204040-mRNA-1 |
| chr8_1 | five_prime_UTR | 59505588 | 59505606 | 59505588 | ID=Msa1204040-mRNA-1:five_prime_utr;Parent=Msa1204040-mRNA-1 |
| chr8_1 | CDS | 59505492 | 59505587 | 59505492 | ID=Msa1204040-mRNA-1:cds;Parent=Msa1204040-mRNA-1 |
| chr8_1 | CDS | 59504968 | 59505112 | 59504968 | ID=Msa1204040-mRNA-1:cds;Parent=Msa1204040-mRNA-1 |
| chr8_1 | CDS | 59502383 | 59504828 | 59502383 | ID=Msa1204040-mRNA-1:cds;Parent=Msa1204040-mRNA-1 |
| chr8_1 | CDS | 59502224 | 59502281 | 59502224 | ID=Msa1204040-mRNA-1:cds;Parent=Msa1204040-mRNA-1 |
| chr8_1 | CDS | 59500675 | 59501196 | 59500675 | ID=Msa1204040-mRNA-1:cds;Parent=Msa1204040-mRNA-1 |
| chr8_1 | three_prime_UTR | 59500522 | 59500674 | 59500522 | ID=Msa1204040-mRNA-1:three_prime_utr;Parent=Msa1204040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
