Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105780 | GAU21835.1 | 82.209 | 163 | 29 | 0 | 5 | 167 | 1 | 163 | 2.90e-89 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105780 | A0A2Z6MFU8 | 82.209 | 163 | 29 | 0 | 5 | 167 | 1 | 163 | 1.38e-89 | 268 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1105780 | 0.815945 | 7.127845e-52 | -8.615850e-47 |
| Msa0002580 | Msa1105780 | 0.809236 | 2.090557e-50 | -8.615850e-47 |
| Msa0005890 | Msa1105780 | 0.822261 | 2.603848e-53 | -8.615850e-47 |
| Msa0018160 | Msa1105780 | 0.830218 | 3.323605e-55 | -8.615850e-47 |
| Msa0025160 | Msa1105780 | 0.805615 | 1.225428e-49 | -8.615850e-47 |
| Msa0025580 | Msa1105780 | 0.800859 | 1.182890e-48 | -8.615850e-47 |
| Msa0027280 | Msa1105780 | 0.816742 | 4.728309e-52 | -8.615850e-47 |
| Msa0035340 | Msa1105780 | 0.818640 | 1.763739e-52 | -8.615850e-47 |
| Msa0050660 | Msa1105780 | 0.816790 | 4.611313e-52 | -8.615850e-47 |
| Msa0050700 | Msa1105780 | 0.817367 | 3.421840e-52 | -8.615850e-47 |
| Msa0050790 | Msa1105780 | 0.819347 | 1.218222e-52 | -8.615850e-47 |
| Msa0052260 | Msa1105780 | 0.801789 | 7.628339e-49 | -8.615850e-47 |
| Msa0054690 | Msa1105780 | 0.814940 | 1.192827e-51 | -8.615850e-47 |
| Msa0090400 | Msa1105780 | 0.837611 | 4.692050e-57 | -8.615850e-47 |
| Msa0097260 | Msa1105780 | 0.802204 | 6.269834e-49 | -8.615850e-47 |
| Msa0117480 | Msa1105780 | 0.806472 | 8.092552e-50 | -8.615850e-47 |
| Msa0611210 | Msa1105780 | 0.800859 | 1.182616e-48 | -8.615850e-47 |
| Msa0626450 | Msa1105780 | 0.811014 | 8.653788e-51 | -8.615850e-47 |
| Msa0626490 | Msa1105780 | 0.807105 | 5.947460e-50 | -8.615850e-47 |
| Msa0640200 | Msa1105780 | 0.803327 | 3.675266e-49 | -8.615850e-47 |
| Msa0644410 | Msa1105780 | 0.809967 | 1.456204e-50 | -8.615850e-47 |
| Msa0661150 | Msa1105780 | 0.819260 | 1.274800e-52 | -8.615850e-47 |
| Msa0664600 | Msa1105780 | 0.806781 | 6.962365e-50 | -8.615850e-47 |
| Msa0670100 | Msa1105780 | 0.803702 | 3.073475e-49 | -8.615850e-47 |
| Msa0675330 | Msa1105780 | 0.811119 | 8.209959e-51 | -8.615850e-47 |
| Msa0700460 | Msa1105780 | 0.811170 | 8.004342e-51 | -8.615850e-47 |
| Msa0721080 | Msa1105780 | 0.810167 | 1.318590e-50 | -8.615850e-47 |
| Msa0725770 | Msa1105780 | 0.810393 | 1.178448e-50 | -8.615850e-47 |
| Msa0735780 | Msa1105780 | 0.811487 | 6.832611e-51 | -8.615850e-47 |
| Msa0738700 | Msa1105780 | 0.826449 | 2.696342e-54 | -8.615850e-47 |
| Msa0741220 | Msa1105780 | 0.824912 | 6.241379e-54 | -8.615850e-47 |
| Msa0756490 | Msa1105780 | 0.804274 | 2.337498e-49 | -8.615850e-47 |
| Msa0761670 | Msa1105780 | 0.819752 | 9.848037e-53 | -8.615850e-47 |
| Msa0768990 | Msa1105780 | 0.800374 | 1.485289e-48 | -8.615850e-47 |
| Msa0795870 | Msa1105780 | 0.829403 | 5.248296e-55 | -8.615850e-47 |
| Msa0819170 | Msa1105780 | 0.802381 | 5.763842e-49 | -8.615850e-47 |
| Msa0829300 | Msa1105780 | 0.813369 | 2.651090e-51 | -8.615850e-47 |
| Msa0829330 | Msa1105780 | 0.818498 | 1.899752e-52 | -8.615850e-47 |
| Msa0833650 | Msa1105780 | 0.827225 | 1.759423e-54 | -8.615850e-47 |
| Msa0835490 | Msa1105780 | 0.803297 | 3.728757e-49 | -8.615850e-47 |
| Msa0128310 | Msa1105780 | 0.805758 | 1.143426e-49 | -8.615850e-47 |
| Msa0137880 | Msa1105780 | 0.826988 | 2.005241e-54 | -8.615850e-47 |
| Msa0140280 | Msa1105780 | 0.803398 | 3.553866e-49 | -8.615850e-47 |
| Msa0146040 | Msa1105780 | 0.832171 | 1.100928e-55 | -8.615850e-47 |
| Msa0149350 | Msa1105780 | 0.809498 | 1.837017e-50 | -8.615850e-47 |
| Msa0182190 | Msa1105780 | 0.800898 | 1.161147e-48 | -8.615850e-47 |
| Msa0182240 | Msa1105780 | 0.812081 | 5.071923e-51 | -8.615850e-47 |
| Msa0188610 | Msa1105780 | 0.829519 | 4.919950e-55 | -8.615850e-47 |
| Msa0190570 | Msa1105780 | 0.804446 | 2.151904e-49 | -8.615850e-47 |
| Msa0225100 | Msa1105780 | 0.815835 | 7.540846e-52 | -8.615850e-47 |
| Msa0225860 | Msa1105780 | 0.820374 | 7.094303e-53 | -8.615850e-47 |
| Msa0230800 | Msa1105780 | 0.821587 | 3.729370e-53 | -8.615850e-47 |
| Msa0230870 | Msa1105780 | 0.805017 | 1.635591e-49 | -8.615850e-47 |
| Msa0369790 | Msa1105780 | 0.831684 | 1.451865e-55 | -8.615850e-47 |
| Msa0380670 | Msa1105780 | 0.808567 | 2.906841e-50 | -8.615850e-47 |
| Msa0419700 | Msa1105780 | 0.807108 | 5.938253e-50 | -8.615850e-47 |
| Msa0430300 | Msa1105780 | 0.821004 | 5.082411e-53 | -8.615850e-47 |
| Msa0435210 | Msa1105780 | 0.821235 | 4.497546e-53 | -8.615850e-47 |
| Msa0436910 | Msa1105780 | 0.810096 | 1.366198e-50 | -8.615850e-47 |
| Msa0464000 | Msa1105780 | 0.831589 | 1.532033e-55 | -8.615850e-47 |
| Msa0472950 | Msa1105780 | 0.815525 | 8.840547e-52 | -8.615850e-47 |
| Msa0474730 | Msa1105780 | 0.800313 | 1.528044e-48 | -8.615850e-47 |
| Msa1020480 | Msa1105780 | 0.801678 | 8.038616e-49 | -8.615850e-47 |
| Msa1021590 | Msa1105780 | 0.811520 | 6.719018e-51 | -8.615850e-47 |
| Msa1042160 | Msa1105780 | 0.835643 | 1.489197e-56 | -8.615850e-47 |
| Msa1042190 | Msa1105780 | 0.833660 | 4.694824e-56 | -8.615850e-47 |
| Msa1044680 | Msa1105780 | 0.843042 | 1.786525e-58 | -8.615850e-47 |
| Msa1062120 | Msa1105780 | 0.901552 | 2.388091e-78 | -8.615850e-47 |
| Msa1062230 | Msa1105780 | 0.889306 | 2.725621e-73 | -8.615850e-47 |
| Msa1074370 | Msa1105780 | 0.803742 | 3.014903e-49 | -8.615850e-47 |
| Msa1090140 | Msa1105780 | 0.802747 | 4.845546e-49 | -8.615850e-47 |
| Msa1105640 | Msa1105780 | 0.847357 | 1.217155e-59 | -8.615850e-47 |
| Msa1105780 | Msa1132840 | 0.831862 | 1.312544e-55 | -8.615850e-47 |
| Msa1105780 | Msa1148960 | 0.807312 | 5.376075e-50 | -8.615850e-47 |
| Msa1105780 | Msa1155170 | -0.806814 | 6.853409e-50 | -8.615850e-47 |
| Msa1105780 | Msa1167470 | 0.827805 | 1.276989e-54 | -8.615850e-47 |
| Msa1105780 | Msa1177320 | 0.807638 | 4.584617e-50 | -8.615850e-47 |
| Msa1105780 | Msa1204040 | 0.809536 | 1.802702e-50 | -8.615850e-47 |
| Msa1105780 | Msa1206460 | 0.801129 | 1.041443e-48 | -8.615850e-47 |
| Msa1105780 | Msa1224930 | 0.806342 | 8.618987e-50 | -8.615850e-47 |
| Msa1105780 | Msa1240770 | 0.803345 | 3.644158e-49 | -8.615850e-47 |
| Msa1105780 | Msa1265650 | 0.806115 | 9.620092e-50 | -8.615850e-47 |
| Msa1105780 | Msa1282260 | 0.810053 | 1.395769e-50 | -8.615850e-47 |
| Msa1105780 | Msa1303560 | 0.809857 | 1.537690e-50 | -8.615850e-47 |
| Msa1105780 | Msa1303650 | 0.817139 | 3.850784e-52 | -8.615850e-47 |
| Msa1105780 | Msa1321340 | 0.818490 | 1.907964e-52 | -8.615850e-47 |
| Msa1105780 | Msa1343180 | 0.807828 | 4.176393e-50 | -8.615850e-47 |
| Msa1105780 | Msa1359690 | 0.809967 | 1.456605e-50 | -8.615850e-47 |
| Msa1105780 | Msa1372040 | 0.820647 | 6.143176e-53 | -8.615850e-47 |
| Msa1105780 | Msa1384460 | 0.808098 | 3.659350e-50 | -8.615850e-47 |
| Msa1105780 | Msa1390440 | 0.807230 | 5.593443e-50 | -8.615850e-47 |
| Msa1105780 | Msa1393780 | 0.800101 | 1.687906e-48 | -8.615850e-47 |
| Msa1105780 | Msa1405460 | 0.817549 | 3.113672e-52 | -8.615850e-47 |
| Msa1105780 | Msa1409410 | 0.806637 | 7.468425e-50 | -8.615850e-47 |
| Msa1105780 | Msa1415540 | 0.821084 | 4.873477e-53 | -8.615850e-47 |
| Msa1105780 | Msa1427100 | 0.805601 | 1.233968e-49 | -8.615850e-47 |
| Msa1105780 | Msa1440630 | 0.821103 | 4.823671e-53 | -8.615850e-47 |
| Msa1105780 | Msa1440960 | 0.806957 | 6.390510e-50 | -8.615850e-47 |
| Msa0242590 | Msa1105780 | 0.808947 | 2.411402e-50 | -8.615850e-47 |
| Msa0244640 | Msa1105780 | 0.820918 | 5.319974e-53 | -8.615850e-47 |
| Msa0266180 | Msa1105780 | 0.817701 | 2.877351e-52 | -8.615850e-47 |
| Msa0267110 | Msa1105780 | 0.813513 | 2.464389e-51 | -8.615850e-47 |
| Msa0270340 | Msa1105780 | 0.836914 | 7.076132e-57 | -8.615850e-47 |
| Msa0283330 | Msa1105780 | 0.802555 | 5.307140e-49 | -8.615850e-47 |
| Msa0287740 | Msa1105780 | 0.819432 | 1.165142e-52 | -8.615850e-47 |
| Msa0292160 | Msa1105780 | 0.808357 | 3.222624e-50 | -8.615850e-47 |
| Msa0321620 | Msa1105780 | 0.833637 | 4.755333e-56 | -8.615850e-47 |
| Msa0509550 | Msa1105780 | 0.817481 | 3.224174e-52 | -8.615850e-47 |
| Msa0517250 | Msa1105780 | 0.809879 | 1.521150e-50 | -8.615850e-47 |
| Msa0519750 | Msa1105780 | 0.807813 | 4.207257e-50 | -8.615850e-47 |
| Msa0519830 | Msa1105780 | 0.805528 | 1.277966e-49 | -8.615850e-47 |
| Msa0520990 | Msa1105780 | 0.808006 | 3.827513e-50 | -8.615850e-47 |
| Msa0528570 | Msa1105780 | 0.832983 | 6.923209e-56 | -8.615850e-47 |
| Msa0529030 | Msa1105780 | 0.822516 | 2.272463e-53 | -8.615850e-47 |
| Msa0530780 | Msa1105780 | 0.840381 | 8.998822e-58 | -8.615850e-47 |
| Msa0541300 | Msa1105780 | 0.800990 | 1.111968e-48 | -8.615850e-47 |
| Msa0543660 | Msa1105780 | 0.810693 | 1.015112e-50 | -8.615850e-47 |
| Msa0548470 | Msa1105780 | 0.818386 | 2.013977e-52 | -8.615850e-47 |
| Msa0550050 | Msa1105780 | 0.804087 | 2.556487e-49 | -8.615850e-47 |
| Msa0557460 | Msa1105780 | 0.829348 | 5.411829e-55 | -8.615850e-47 |
| Msa0580370 | Msa1105780 | 0.834716 | 2.552491e-56 | -8.615850e-47 |
| Msa0584420 | Msa1105780 | 0.811787 | 5.877652e-51 | -8.615850e-47 |
| Msa0585020 | Msa1105780 | 0.808418 | 3.127963e-50 | -8.615850e-47 |
| Msa0587620 | Msa1105780 | 0.825478 | 4.586549e-54 | -8.615850e-47 |
| Msa0597270 | Msa1105780 | 0.812012 | 5.252598e-51 | -8.615850e-47 |
| Msa0859290 | Msa1105780 | 0.823266 | 1.519050e-53 | -8.615850e-47 |
| Msa0876930 | Msa1105780 | 0.802709 | 4.933838e-49 | -8.615850e-47 |
| Msa0905240 | Msa1105780 | 0.800893 | 1.164143e-48 | -8.615850e-47 |
| Msa0967870 | Msa1105780 | 0.806462 | 8.131676e-50 | -8.615850e-47 |
| Msa0974520 | Msa1105780 | 0.807278 | 5.463962e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105780 | MtrunA17_Chr7g0237941 | 92.517 | 147 | 11 | 0 | 1 | 147 | 1 | 147 | 2.07e-90 | 260 |
| Msa1105780 | MtrunA17_Chr4g0010041 | 62.428 | 173 | 58 | 4 | 1 | 167 | 1 | 172 | 5.01e-58 | 180 |
| Msa1105780 | MtrunA17_Chr2g0328051 | 47.973 | 148 | 68 | 3 | 1 | 141 | 1 | 146 | 1.12e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105780 | AT5G02440.1 | 46.243 | 173 | 66 | 5 | 1 | 146 | 1 | 173 | 5.37e-27 | 100 |
Find 49 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTTAGCACTTTGCTTTC+TGG | 0.087700 | 7_3:-44678947 | Msa1105780:CDS |
| TAGGATCATAGATGTGTTTC+AGG | 0.209395 | 7_3:-44676077 | Msa1105780:three_prime_UTR |
| CCTACAAGTTATAGACAAAA+TGG | 0.272947 | 7_3:-44676380 | Msa1105780:CDS |
| CAAATTCTCTGCTTCAATCT+TGG | 0.286516 | 7_3:+44676315 | None:intergenic |
| GCTTCGGCTTGTGATTCTTT+TGG | 0.324268 | 7_3:+44676528 | None:intergenic |
| TTGATCTCCTTGAGAGTTGT+AGG | 0.333801 | 7_3:+44676585 | None:intergenic |
| CAGGAAGAAGGGTGGCCATT+TGG | 0.342238 | 7_3:-44679031 | Msa1105780:CDS |
| GAAACCTTAAAACCATGTTT+AGG | 0.360030 | 7_3:-44676096 | Msa1105780:three_prime_UTR |
| GACTCAACCTCACACTTTGT+TGG | 0.365247 | 7_3:-44676341 | Msa1105780:CDS |
| AGTATATTTCATTTAGATCA+TGG | 0.406251 | 7_3:-44676222 | Msa1105780:three_prime_UTR |
| ATAGTATCAACTTTGATTCA+AGG | 0.407543 | 7_3:+44679352 | None:intergenic |
| AAAGACAGTAATGGCTCAAC+AGG | 0.413642 | 7_3:-44679281 | Msa1105780:intron |
| GATTATTGAATTCTAGAGTT+GGG | 0.422488 | 7_3:-44679003 | Msa1105780:CDS |
| TGTGAGGTTGAGTCTTGAAT+AGG | 0.433184 | 7_3:+44676350 | None:intergenic |
| TTGGGGTTGATTCAGGAAGA+AGG | 0.433599 | 7_3:-44679043 | Msa1105780:intron |
| TTGTACTTTGTACAGTCCAC+TGG | 0.452011 | 7_3:-44676665 | Msa1105780:intron |
| TTCAATAATCTCAATCCAAA+TGG | 0.457501 | 7_3:+44679016 | None:intergenic |
| TCTGATGAAGAATAAGTTGA+AGG | 0.462420 | 7_3:+44678914 | None:intergenic |
| CTTAATACTGATGCGGTGAA+TGG | 0.470568 | 7_3:-44676479 | Msa1105780:CDS |
| AGATTATTGAATTCTAGAGT+TGG | 0.478548 | 7_3:-44679004 | Msa1105780:CDS |
| GGTAATGATGCTCATTCTCT+TGG | 0.479818 | 7_3:-44676458 | Msa1105780:CDS |
| AGTGAAAACAACCAAGGCTT+CGG | 0.483004 | 7_3:+44676512 | None:intergenic |
| TGGGGTTGATTCAGGAAGAA+GGG | 0.497078 | 7_3:-44679042 | Msa1105780:intron |
| TCTAATTATTATTGCAGTCG+TGG | 0.497186 | 7_3:-44676198 | Msa1105780:three_prime_UTR |
| ATTGAATTCTAGAGTTGGGC+TGG | 0.499054 | 7_3:-44678999 | Msa1105780:CDS |
| TTCATCAGATCTTGACACTC+AGG | 0.504319 | 7_3:-44678900 | Msa1105780:intron |
| TTGTGGTTATGATGCCCGTC+TGG | 0.518049 | 7_3:-44676118 | Msa1105780:three_prime_UTR |
| AGAATCACAAGCCGAAGCCT+TGG | 0.520418 | 7_3:-44676523 | Msa1105780:CDS |
| GCAGAGAATTTGAACACGAA+TGG | 0.526620 | 7_3:-44676304 | Msa1105780:three_prime_UTR |
| TTGTTCAGAAAAGACAGTAA+TGG | 0.542795 | 7_3:-44679290 | Msa1105780:exon |
| ATCAAGCAGAGGAAGAGTGA+TGG | 0.548599 | 7_3:-44676567 | Msa1105780:CDS |
| AGAGTTGGGCTGGTGAGAAA+TGG | 0.552892 | 7_3:-44678989 | Msa1105780:CDS |
| CATTTAACATATAGATGCAA+TGG | 0.564660 | 7_3:+44679473 | None:intergenic |
| TATACTAAAATGAGTAACAA+TGG | 0.571371 | 7_3:+44676239 | None:intergenic |
| AAGAGTGATGGATTCATCAA+AGG | 0.581601 | 7_3:-44676555 | Msa1105780:CDS |
| CAAGCTTCCTACAACTCTCA+AGG | 0.593246 | 7_3:-44676592 | Msa1105780:CDS |
| CACATCTATGATCCTAAACA+TGG | 0.596672 | 7_3:+44676084 | None:intergenic |
| GGAAGCTTGAAGCTCGAATG+AGG | 0.602326 | 7_3:+44676606 | None:intergenic |
| CATGACAAGAGCATTACACT+AGG | 0.621795 | 7_3:-44676632 | Msa1105780:CDS |
| CTAGTGTAATGCTCTTGTCA+TGG | 0.631907 | 7_3:+44676633 | None:intergenic |
| TTGGCTTCCAACAAAGTGTG+AGG | 0.644693 | 7_3:+44676334 | None:intergenic |
| TGAAGAATAAGTTGAAGGTG+TGG | 0.652313 | 7_3:+44678919 | None:intergenic |
| GAAGAATAAGTTGAAGGTGT+GGG | 0.654137 | 7_3:+44678920 | None:intergenic |
| TTGTAAGCTTAATACTGATG+CGG | 0.657861 | 7_3:-44676486 | Msa1105780:CDS |
| GGTTGATTCAGGAAGAAGGG+TGG | 0.659891 | 7_3:-44679039 | Msa1105780:intron |
| CTCTCAAGGAGATCAAGCAG+AGG | 0.673615 | 7_3:-44676578 | Msa1105780:CDS |
| CAACAAAGTGAAAACAACCA+AGG | 0.675097 | 7_3:+44676506 | None:intergenic |
| GTCATGGAAGAATGATCCAG+TGG | 0.680673 | 7_3:+44676649 | None:intergenic |
| GGCCGATGCGATCAAAATTG+TGG | 0.688826 | 7_3:-44676135 | Msa1105780:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAAATTTGAAAGAAT+CGG | - | chr7_3:44676857-44676876 | Msa1105780:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr7_3:44677602-44677621 | Msa1105780:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr7_3:44677603-44677622 | Msa1105780:intron | 10.0% |
| !!! | AAAAAACAACACTTTAAAAA+AGG | + | chr7_3:44676134-44676153 | None:intergenic | 15.0% |
| !!! | TTTTTAAAGTGTTGTTTTTT+TGG | - | chr7_3:44676134-44676153 | Msa1105780:three_prime_UTR | 15.0% |
| !!! | TGATTTTATTTATATTTTGG+TGG | - | chr7_3:44676488-44676507 | Msa1105780:CDS | 15.0% |
| !!! | GATTTTATTTATATTTTGGT+GGG | - | chr7_3:44676489-44676508 | Msa1105780:CDS | 15.0% |
| !! | TTAAAAAGTAGTAAAAGAAT+CGG | + | chr7_3:44676918-44676937 | None:intergenic | 15.0% |
| !!! | ATTCTTTTACTACTTTTTAA+CGG | - | chr7_3:44676918-44676937 | Msa1105780:intron | 15.0% |
| !!! | TCTTTTATAGTACAAAATAA+TGG | - | chr7_3:44677478-44677497 | Msa1105780:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr7_3:44677604-44677623 | Msa1105780:intron | 15.0% |
| !! | AAGAAAAAAAACATTCTTAA+TGG | - | chr7_3:44678273-44678292 | Msa1105780:intron | 15.0% |
| !! | AAATGAAAATCTTACTTTAA+AGG | - | chr7_3:44678455-44678474 | Msa1105780:intron | 15.0% |
| !!! | TTTTGATTGAATCATTTTGA+GGG | - | chr7_3:44676421-44676440 | Msa1105780:CDS | 20.0% |
| !!! | AATTTTGTACTTTCATTGTA+TGG | - | chr7_3:44676826-44676845 | Msa1105780:intron | 20.0% |
| !!! | CTTTGAAAATTTGAAAGAAT+CGG | - | chr7_3:44677141-44677160 | Msa1105780:intron | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr7_3:44677627-44677646 | Msa1105780:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr7_3:44677700-44677719 | Msa1105780:intron | 20.0% |
| !!! | TTGAAATGGTTCAATTATTT+TGG | - | chr7_3:44677714-44677733 | Msa1105780:intron | 20.0% |
| !!! | TGAAATGGTTCAATTATTTT+GGG | - | chr7_3:44677715-44677734 | Msa1105780:intron | 20.0% |
| !!! | GACACTTTTTTTTAGTAAAT+GGG | - | chr7_3:44677737-44677756 | Msa1105780:intron | 20.0% |
| !! | GAATAAATACCAAATCTTTA+TGG | + | chr7_3:44678015-44678034 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGATTCTCTTATT+TGG | - | chr7_3:44678046-44678065 | Msa1105780:intron | 20.0% |
| !!! | ATTGTTTTTTTGTTAGCATA+TGG | - | chr7_3:44678179-44678198 | Msa1105780:intron | 20.0% |
| !! | TATACTAAAATGAGTAACAA+TGG | + | chr7_3:44679322-44679341 | None:intergenic | 20.0% |
| !! | AGTATATTTCATTTAGATCA+TGG | - | chr7_3:44679336-44679355 | Msa1105780:five_prime_UTR | 20.0% |
| ! | CATTTAACATATAGATGCAA+TGG | + | chr7_3:44676088-44676107 | None:intergenic | 25.0% |
| ! | ATAGTATCAACTTTGATTCA+AGG | + | chr7_3:44676209-44676228 | None:intergenic | 25.0% |
| !!! | CTTTTGATTGAATCATTTTG+AGG | - | chr7_3:44676420-44676439 | Msa1105780:CDS | 25.0% |
| ! | TCAGCATATTTATGAGATTA+TGG | - | chr7_3:44676455-44676474 | Msa1105780:CDS | 25.0% |
| !!! | TTTATATTTTGGTGGGTTTT+TGG | - | chr7_3:44676496-44676515 | Msa1105780:CDS | 25.0% |
| !!! | TTATATTTTGGTGGGTTTTT+GGG | - | chr7_3:44676497-44676516 | Msa1105780:CDS | 25.0% |
| ! | TTCAATAATCTCAATCCAAA+TGG | + | chr7_3:44676545-44676564 | None:intergenic | 25.0% |
| !!! | AGATTATTGAATTCTAGAGT+TGG | - | chr7_3:44676554-44676573 | Msa1105780:CDS | 25.0% |
| !!! | GATTATTGAATTCTAGAGTT+GGG | - | chr7_3:44676555-44676574 | Msa1105780:CDS | 25.0% |
| ! | TTGTTTGTTTGATACCATAT+TGG | - | chr7_3:44676744-44676763 | Msa1105780:intron | 25.0% |
| ! | ACAGTTACAAGAAAACAAAA+AGG | + | chr7_3:44676788-44676807 | None:intergenic | 25.0% |
| ! | AAATGAACAAGTTACAAGTA+AGG | + | chr7_3:44677081-44677100 | None:intergenic | 25.0% |
| !!! | TTAGTAAGATTTTCAAGTCA+TGG | + | chr7_3:44677329-44677348 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGAAT+TGG | - | chr7_3:44677626-44677645 | Msa1105780:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | - | chr7_3:44677736-44677755 | Msa1105780:intron | 25.0% |
| ! | ATAGGATCAATAACCAAAAA+GGG | + | chr7_3:44677789-44677808 | None:intergenic | 25.0% |
| ! | AATAGGATCAATAACCAAAA+AGG | + | chr7_3:44677790-44677809 | None:intergenic | 25.0% |
| ! | ATACTACATACATAATTGCT+TGG | - | chr7_3:44678085-44678104 | Msa1105780:intron | 25.0% |
| !! | AAGACTTTAACTTTCAACAA+AGG | + | chr7_3:44678240-44678259 | None:intergenic | 25.0% |
| ! | TTAAAGTCTTCTATGATGTT+TGG | - | chr7_3:44678250-44678269 | Msa1105780:intron | 25.0% |
| ! | TGTTACTAAAGAAACATCAA+AGG | + | chr7_3:44678390-44678409 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr7_3:44678693-44678712 | None:intergenic | 25.0% |
| ! | TTTAGTGTAATTACAAGTGT+CGG | - | chr7_3:44678724-44678743 | Msa1105780:intron | 25.0% |
| !! | CACATTTTTCTACAATGTAA+AGG | + | chr7_3:44679404-44679423 | None:intergenic | 25.0% |
| ! | CTTTACATTGTAGAAAAATG+TGG | - | chr7_3:44679402-44679421 | Msa1105780:five_prime_UTR | 25.0% |
| !!! | GTGTTGTTTTTTTGGTTAGA+AGG | - | chr7_3:44676142-44676161 | Msa1105780:three_prime_UTR | 30.0% |
| ! | ACTGTCTTTTCTGAACAAAA+TGG | + | chr7_3:44676266-44676285 | None:intergenic | 30.0% |
| TTGTTCAGAAAAGACAGTAA+TGG | - | chr7_3:44676268-44676287 | Msa1105780:three_prime_UTR | 30.0% | |
| !!! | TATATTTTGGTGGGTTTTTG+GGG | - | chr7_3:44676498-44676517 | Msa1105780:CDS | 30.0% |
| ! | TCTGATGAAGAATAAGTTGA+AGG | + | chr7_3:44676647-44676666 | None:intergenic | 30.0% |
| ATGGTATCAAACAAACAAAG+TGG | + | chr7_3:44676742-44676761 | None:intergenic | 30.0% | |
| AAACTCTAGCATTACCAATA+TGG | + | chr7_3:44676761-44676780 | None:intergenic | 30.0% | |
| ! | CTTTTTAACGGTGATTGAAT+CGG | - | chr7_3:44676930-44676949 | Msa1105780:intron | 30.0% |
| AACCTAAACAATCATTGAGT+TGG | + | chr7_3:44676980-44676999 | None:intergenic | 30.0% | |
| TTGGTATCAAACAAACAAAG+TGG | + | chr7_3:44677027-44677046 | None:intergenic | 30.0% | |
| TTGATACCAAATTGCCATTA+TGG | - | chr7_3:44677037-44677056 | Msa1105780:intron | 30.0% | |
| AGTTTCTTCAAACACCATAA+TGG | + | chr7_3:44677054-44677073 | None:intergenic | 30.0% | |
| ATCAAACCAATCGGTAAATT+GGG | + | chr7_3:44677195-44677214 | None:intergenic | 30.0% | |
| AATCAAACCAATCGGTAAAT+TGG | + | chr7_3:44677196-44677215 | None:intergenic | 30.0% | |
| CTGATTGAACTTGATTGAAT+CGG | - | chr7_3:44677232-44677251 | Msa1105780:intron | 30.0% | |
| TGATTGAACTTGATTGAATC+GGG | - | chr7_3:44677233-44677252 | Msa1105780:intron | 30.0% | |
| ACTGCAATGATTTGAAAATC+TGG | + | chr7_3:44677364-44677383 | None:intergenic | 30.0% | |
| TGATGACACTATTTCAGTTA+TGG | - | chr7_3:44677383-44677402 | Msa1105780:intron | 30.0% | |
| ! | CAAACTGGTTCAAATATTTC+GGG | + | chr7_3:44677567-44677586 | None:intergenic | 30.0% |
| ! | CCAAACTGGTTCAAATATTT+CGG | + | chr7_3:44677568-44677587 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr7_3:44677611-44677630 | Msa1105780:intron | 30.0% | |
| TACTCTTTATTACTTTCACC+TGG | - | chr7_3:44677849-44677868 | Msa1105780:intron | 30.0% | |
| AACCAAAGTACATAGTCAAA+AGG | + | chr7_3:44677893-44677912 | None:intergenic | 30.0% | |
| TGGTTTCATAATTTCTCTGA+TGG | - | chr7_3:44677908-44677927 | Msa1105780:intron | 30.0% | |
| TCCAAAATCCAACATTGAAT+AGG | - | chr7_3:44677961-44677980 | Msa1105780:intron | 30.0% | |
| ! | TCCTATTCAATGTTGGATTT+TGG | + | chr7_3:44677965-44677984 | None:intergenic | 30.0% |
| ATCCAACATTGAATAGGAAA+AGG | - | chr7_3:44677967-44677986 | Msa1105780:intron | 30.0% | |
| ! | TTCCTTTTCCTATTCAATGT+TGG | + | chr7_3:44677972-44677991 | None:intergenic | 30.0% |
| TGAACATGTCCATAAAGATT+TGG | - | chr7_3:44678003-44678022 | Msa1105780:intron | 30.0% | |
| ATCAACTAAAAGAAAACGAC+AGG | + | chr7_3:44678037-44678056 | None:intergenic | 30.0% | |
| ! | TTACTTTAAAGGCTGAAGTA+AGG | - | chr7_3:44678466-44678485 | Msa1105780:intron | 30.0% |
| TTTGTTAACCCATCATGATT+TGG | - | chr7_3:44678614-44678633 | Msa1105780:intron | 30.0% | |
| AGTATTCATGCTTCATAGTT+TGG | - | chr7_3:44678805-44678824 | Msa1105780:intron | 30.0% | |
| TTGTAAGCTTAATACTGATG+CGG | - | chr7_3:44679072-44679091 | Msa1105780:intron | 30.0% | |
| !! | CCATTTTGTCTATAACTTGT+AGG | + | chr7_3:44679181-44679200 | None:intergenic | 30.0% |
| CCTACAAGTTATAGACAAAA+TGG | - | chr7_3:44679178-44679197 | Msa1105780:intron | 30.0% | |
| TCTAATTATTATTGCAGTCG+TGG | - | chr7_3:44679360-44679379 | Msa1105780:five_prime_UTR | 30.0% | |
| GAAACCTTAAAACCATGTTT+AGG | - | chr7_3:44679462-44679481 | Msa1105780:five_prime_UTR | 30.0% | |
| !! | TGATCCTAAACATGGTTTTA+AGG | + | chr7_3:44679469-44679488 | None:intergenic | 30.0% |
| ! | GTGAGAAATGGTGATTTTTC+AGG | - | chr7_3:44676581-44676600 | Msa1105780:CDS | 35.0% |
| !!! | AATGGTGATTTTTCAGGTTC+AGG | - | chr7_3:44676587-44676606 | Msa1105780:CDS | 35.0% |
| TCATTTAGCACTTTGCTTTC+TGG | - | chr7_3:44676611-44676630 | Msa1105780:CDS | 35.0% | |
| ! | GAAGAATAAGTTGAAGGTGT+GGG | + | chr7_3:44676641-44676660 | None:intergenic | 35.0% |
| ! | TGAAGAATAAGTTGAAGGTG+TGG | + | chr7_3:44676642-44676661 | None:intergenic | 35.0% |
| ! | AATCGGTTCAATCGATTGAA+AGG | - | chr7_3:44676874-44676893 | Msa1105780:intron | 35.0% |
| ! | ATCGGTTCAATCGATTGAAA+GGG | - | chr7_3:44676875-44676894 | Msa1105780:intron | 35.0% |
| !!! | TTGGTGAGATTTTCAAGTCA+TGG | + | chr7_3:44676961-44676980 | None:intergenic | 35.0% |
| CACCAACTCAATGATTGTTT+AGG | - | chr7_3:44676975-44676994 | Msa1105780:intron | 35.0% | |
| CAAACACCATAATGGCAATT+TGG | + | chr7_3:44677046-44677065 | None:intergenic | 35.0% | |
| ! | AAAGAATCGGCTAGTTCAAT+CGG | - | chr7_3:44677154-44677173 | Msa1105780:intron | 35.0% |
| !! | TTTACCGATTGGTTTGATTC+TGG | - | chr7_3:44677197-44677216 | Msa1105780:intron | 35.0% |
| ACAACCAGAATCAAACCAAT+CGG | + | chr7_3:44677204-44677223 | None:intergenic | 35.0% | |
| !!! | TTTTCAAGTCATGGTTCAAC+TGG | + | chr7_3:44676952-44676971 | None:intergenic | 35.0% |
| CCGAAATATTTGAACCAGTT+TGG | - | chr7_3:44677565-44677584 | Msa1105780:intron | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr7_3:44677582-44677601 | None:intergenic | 35.0% | |
| AGTAAATGGGTCAGATATTC+CGG | - | chr7_3:44677750-44677769 | Msa1105780:intron | 35.0% | |
| ! | TATTACTTTCACCTGGTTTG+TGG | - | chr7_3:44677856-44677875 | Msa1105780:intron | 35.0% |
| AAGTACATAGTCAAAAGGCA+TGG | + | chr7_3:44677888-44677907 | None:intergenic | 35.0% | |
| !! | TGCCTTTTGACTATGTACTT+TGG | - | chr7_3:44677888-44677907 | Msa1105780:intron | 35.0% |
| TCATAATTTCTCTGATGGAG+AGG | - | chr7_3:44677913-44677932 | Msa1105780:intron | 35.0% | |
| TTAGATAACAACCCTTGAGA+AGG | - | chr7_3:44678297-44678316 | Msa1105780:intron | 35.0% | |
| TAGATAACAACCCTTGAGAA+GGG | - | chr7_3:44678298-44678317 | Msa1105780:intron | 35.0% | |
| TTCTTTCTTACCCTTCTCAA+GGG | + | chr7_3:44678311-44678330 | None:intergenic | 35.0% | |
| TGTCAATCTAAACATGCACT+CGG | + | chr7_3:44678564-44678583 | None:intergenic | 35.0% | |
| GTTTAGATTGACAGTGAACT+TGG | - | chr7_3:44678571-44678590 | Msa1105780:intron | 35.0% | |
| GTTTCGTACCAAATCATGAT+GGG | + | chr7_3:44678625-44678644 | None:intergenic | 35.0% | |
| TGTTTCGTACCAAATCATGA+TGG | + | chr7_3:44678626-44678645 | None:intergenic | 35.0% | |
| !! | TCATGATTTGGTACGAAACA+CGG | - | chr7_3:44678626-44678645 | Msa1105780:intron | 35.0% |
| TATGAAGCATGAATACTCCT+CGG | + | chr7_3:44678802-44678821 | None:intergenic | 35.0% | |
| TTGCCTTAACTCACTTAACA+TGG | - | chr7_3:44678868-44678887 | Msa1105780:intron | 35.0% | |
| TGCCTTAACTCACTTAACAT+GGG | - | chr7_3:44678869-44678888 | Msa1105780:intron | 35.0% | |
| AACCCATGTTAAGTGAGTTA+AGG | + | chr7_3:44678874-44678893 | None:intergenic | 35.0% | |
| !! | AAGAGTGATGGATTCATCAA+AGG | - | chr7_3:44679003-44679022 | Msa1105780:CDS | 35.0% |
| CAACAAAGTGAAAACAACCA+AGG | + | chr7_3:44679055-44679074 | None:intergenic | 35.0% | |
| CAAATTCTCTGCTTCAATCT+TGG | + | chr7_3:44679246-44679265 | None:intergenic | 35.0% | |
| ! | ATGGTTTTCTCTAGTTAGTG+TGG | - | chr7_3:44679273-44679292 | Msa1105780:intron | 35.0% |
| !! | AACCACAATTTTGATCGCAT+CGG | + | chr7_3:44679428-44679447 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAAGGTTTCCAGA+CGG | + | chr7_3:44679458-44679477 | None:intergenic | 35.0% |
| CACATCTATGATCCTAAACA+TGG | + | chr7_3:44679477-44679496 | None:intergenic | 35.0% | |
| TAGGATCATAGATGTGTTTC+AGG | - | chr7_3:44679481-44679500 | Msa1105780:five_prime_UTR | 35.0% | |
| AAAGACAGTAATGGCTCAAC+AGG | - | chr7_3:44676277-44676296 | Msa1105780:three_prime_UTR | 40.0% | |
| CTCTAACAACAGACACAATG+TGG | - | chr7_3:44676344-44676363 | Msa1105780:CDS | 40.0% | |
| !! | ATTGAATTCTAGAGTTGGGC+TGG | - | chr7_3:44676559-44676578 | Msa1105780:CDS | 40.0% |
| TTCATCAGATCTTGACACTC+AGG | - | chr7_3:44676658-44676677 | Msa1105780:intron | 40.0% | |
| TCGGTTCAATCGATTGAAAG+GGG | - | chr7_3:44676876-44676895 | Msa1105780:intron | 40.0% | |
| CAATCGATTGAAAGGGGAAT+CGG | - | chr7_3:44676882-44676901 | Msa1105780:intron | 40.0% | |
| GCTAGTTCAATCGGTTGAAA+GGG | - | chr7_3:44677163-44677182 | Msa1105780:intron | 40.0% | |
| CTAGTTCAATCGGTTGAAAG+GGG | - | chr7_3:44677164-44677183 | Msa1105780:intron | 40.0% | |
| TGGTTCAGTCAAGGTTGTAT+CGG | + | chr7_3:44677300-44677319 | None:intergenic | 40.0% | |
| TTCAAATATTTCGGGACGGA+GGG | + | chr7_3:44677559-44677578 | None:intergenic | 40.0% | |
| CTGGTTCAAATATTTCGGGA+CGG | + | chr7_3:44677563-44677582 | None:intergenic | 40.0% | |
| GTAAATGGGTCAGATATTCC+GGG | - | chr7_3:44677751-44677770 | Msa1105780:intron | 40.0% | |
| CATGGTTATAACCACAAACC+AGG | + | chr7_3:44677870-44677889 | None:intergenic | 40.0% | |
| ! | GGATTTTGGACTCATTCTCA+AGG | + | chr7_3:44677951-44677970 | None:intergenic | 40.0% |
| ACATAATTGCTTGGCTCCTA+TGG | - | chr7_3:44678094-44678113 | Msa1105780:intron | 40.0% | |
| CATAATTGCTTGGCTCCTAT+GGG | - | chr7_3:44678095-44678114 | Msa1105780:intron | 40.0% | |
| ATAATTGCTTGGCTCCTATG+GGG | - | chr7_3:44678096-44678115 | Msa1105780:intron | 40.0% | |
| !! | TGGACTAGCACATCATTGTT+TGG | - | chr7_3:44678128-44678147 | Msa1105780:intron | 40.0% |
| CTTCTTTCTTACCCTTCTCA+AGG | + | chr7_3:44678312-44678331 | None:intergenic | 40.0% | |
| TTTGGTACGAAACACGGATA+CGG | - | chr7_3:44678632-44678651 | Msa1105780:intron | 40.0% | |
| TTGTACTTTGTACAGTCCAC+TGG | - | chr7_3:44678893-44678912 | Msa1105780:intron | 40.0% | |
| CTAGTGTAATGCTCTTGTCA+TGG | + | chr7_3:44678928-44678947 | None:intergenic | 40.0% | |
| !! | CATGACAAGAGCATTACACT+AGG | - | chr7_3:44678926-44678945 | Msa1105780:CDS | 40.0% |
| TTGATCTCCTTGAGAGTTGT+AGG | + | chr7_3:44678976-44678995 | None:intergenic | 40.0% | |
| AGTGAAAACAACCAAGGCTT+CGG | + | chr7_3:44679049-44679068 | None:intergenic | 40.0% | |
| CTTAATACTGATGCGGTGAA+TGG | - | chr7_3:44679079-44679098 | Msa1105780:intron | 40.0% | |
| GGTAATGATGCTCATTCTCT+TGG | - | chr7_3:44679100-44679119 | Msa1105780:intron | 40.0% | |
| TGTGAGGTTGAGTCTTGAAT+AGG | + | chr7_3:44679211-44679230 | None:intergenic | 40.0% | |
| GCAGAGAATTTGAACACGAA+TGG | - | chr7_3:44679254-44679273 | Msa1105780:intron | 40.0% | |
| !!! | TGGTTTTAAGGTTTCCAGAC+GGG | + | chr7_3:44679457-44679476 | None:intergenic | 40.0% |
| !!! | TGGGTTTTTGGGGTTGATTC+AGG | - | chr7_3:44676508-44676527 | Msa1105780:CDS | 45.0% |
| ! | TTGGGGTTGATTCAGGAAGA+AGG | - | chr7_3:44676515-44676534 | Msa1105780:CDS | 45.0% |
| ! | TGGGGTTGATTCAGGAAGAA+GGG | - | chr7_3:44676516-44676535 | Msa1105780:CDS | 45.0% |
| GATTGAAAGGGGAATCGGAT+TGG | - | chr7_3:44676887-44676906 | Msa1105780:intron | 45.0% | |
| ! | GGCTAGTTCAATCGGTTGAA+AGG | - | chr7_3:44677162-44677181 | Msa1105780:intron | 45.0% |
| GAACGACCCAATTTACCGAT+TGG | - | chr7_3:44677186-44677205 | Msa1105780:intron | 45.0% | |
| ! | TGGTTCAACTGGTTCAGTCA+AGG | + | chr7_3:44677309-44677328 | None:intergenic | 45.0% |
| GTTCAAATATTTCGGGACGG+AGG | + | chr7_3:44677560-44677579 | None:intergenic | 45.0% | |
| ATACATGCTCACTGCTCAGT+AGG | + | chr7_3:44677813-44677832 | None:intergenic | 45.0% | |
| TGATGTGCTAGTCCATGCTT+TGG | + | chr7_3:44678123-44678142 | None:intergenic | 45.0% | |
| TGAACTTGGCGAAATCACGA+TGG | - | chr7_3:44678585-44678604 | Msa1105780:intron | 45.0% | |
| !! | TACAAGTGTCGGTGTTGTGT+CGG | - | chr7_3:44678735-44678754 | Msa1105780:intron | 45.0% |
| GCATGAATACTCCTCGGATT+AGG | + | chr7_3:44678796-44678815 | None:intergenic | 45.0% | |
| GTCATGGAAGAATGATCCAG+TGG | + | chr7_3:44678912-44678931 | None:intergenic | 45.0% | |
| CAAGCTTCCTACAACTCTCA+AGG | - | chr7_3:44678966-44678985 | Msa1105780:CDS | 45.0% | |
| ATCAAGCAGAGGAAGAGTGA+TGG | - | chr7_3:44678991-44679010 | Msa1105780:CDS | 45.0% | |
| !! | GCTTCGGCTTGTGATTCTTT+TGG | + | chr7_3:44679033-44679052 | None:intergenic | 45.0% |
| GACTCAACCTCACACTTTGT+TGG | - | chr7_3:44679217-44679236 | Msa1105780:intron | 45.0% | |
| TTGGCTTCCAACAAAGTGTG+AGG | + | chr7_3:44679227-44679246 | None:intergenic | 45.0% | |
| !!! | TTTTGATTTTATTTATATTT+TGG | - | chr7_3:44676485-44676504 | Msa1105780:CDS | 5.0% |
| !!! | CTTTTTATTTTTTATTTTTT+TGG | - | chr7_3:44677270-44677289 | Msa1105780:intron | 5.0% |
| ! | GGTTGATTCAGGAAGAAGGG+TGG | - | chr7_3:44676519-44676538 | Msa1105780:CDS | 50.0% |
| !! | AGAGTTGGGCTGGTGAGAAA+TGG | - | chr7_3:44676569-44676588 | Msa1105780:CDS | 50.0% |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr7_3:44677755-44677774 | Msa1105780:intron | 50.0% | |
| GCTCACTGCTCAGTAGGAAT+AGG | + | chr7_3:44677807-44677826 | None:intergenic | 50.0% | |
| AACACGGATACGGACACGTA+CGG | - | chr7_3:44678642-44678661 | Msa1105780:intron | 50.0% | |
| CACGTACGGTGGATACAACA+CGG | - | chr7_3:44678656-44678675 | Msa1105780:intron | 50.0% | |
| ACACGACACGTCTATGACAC+CGG | - | chr7_3:44678764-44678783 | Msa1105780:intron | 50.0% | |
| GGAAGCTTGAAGCTCGAATG+AGG | + | chr7_3:44678955-44678974 | None:intergenic | 50.0% | |
| CTCTCAAGGAGATCAAGCAG+AGG | - | chr7_3:44678980-44678999 | Msa1105780:CDS | 50.0% | |
| AGAATCACAAGCCGAAGCCT+TGG | - | chr7_3:44679035-44679054 | Msa1105780:intron | 50.0% | |
| GGCCGATGCGATCAAAATTG+TGG | - | chr7_3:44679423-44679442 | Msa1105780:five_prime_UTR | 50.0% | |
| TTGTGGTTATGATGCCCGTC+TGG | - | chr7_3:44679440-44679459 | Msa1105780:five_prime_UTR | 50.0% | |
| CAGGAAGAAGGGTGGCCATT+TGG | - | chr7_3:44676527-44676546 | Msa1105780:CDS | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | - | chr7_3:44677759-44677778 | Msa1105780:intron | 55.0% | |
| !!! | GACGGAGGGAGTACCCTTTT+TGG | - | chr7_3:44677773-44677792 | Msa1105780:intron | 55.0% |
| CTCCTATGGGGTCCAAAGCA+TGG | - | chr7_3:44678108-44678127 | Msa1105780:intron | 55.0% | |
| ! | GTCCATGCTTTGGACCCCAT+AGG | + | chr7_3:44678113-44678132 | None:intergenic | 55.0% |
| !! | TGTCGGTGTTGTGTCGGTGT+CGG | - | chr7_3:44678741-44678760 | Msa1105780:intron | 55.0% |
| CACGACACGTCTATGACACC+GGG | - | chr7_3:44678765-44678784 | Msa1105780:intron | 55.0% | |
| GGTCAGATATTCCGGGACGG+AGG | - | chr7_3:44677758-44677777 | Msa1105780:intron | 60.0% | |
| !! | AAAGGGTACTCCCTCCGTCC+CGG | + | chr7_3:44677772-44677791 | None:intergenic | 60.0% |
| ACGGATACGGACACGTACGG+TGG | - | chr7_3:44678645-44678664 | Msa1105780:intron | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr7_3:44678786-44678805 | None:intergenic | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr7_3:44678782-44678801 | Msa1105780:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 44676065 | 44679515 | 44676065 | ID=Msa1105780;Name=Msa1105780 |
| chr7_3 | mRNA | 44676065 | 44679515 | 44676065 | ID=Msa1105780-mRNA-1;Parent=Msa1105780;Name=Msa1105780-mRNA-1;_AED=0.04;_eAED=0.04;_QI=222|1|1|1|1|1|3|263|168 |
| chr7_3 | exon | 44676065 | 44676672 | 44676065 | ID=Msa1105780-mRNA-1:exon:9195;Parent=Msa1105780-mRNA-1 |
| chr7_3 | exon | 44678901 | 44679050 | 44678901 | ID=Msa1105780-mRNA-1:exon:9194;Parent=Msa1105780-mRNA-1 |
| chr7_3 | exon | 44679282 | 44679515 | 44679282 | ID=Msa1105780-mRNA-1:exon:9193;Parent=Msa1105780-mRNA-1 |
| chr7_3 | five_prime_UTR | 44679294 | 44679515 | 44679294 | ID=Msa1105780-mRNA-1:five_prime_utr;Parent=Msa1105780-mRNA-1 |
| chr7_3 | CDS | 44679282 | 44679293 | 44679282 | ID=Msa1105780-mRNA-1:cds;Parent=Msa1105780-mRNA-1 |
| chr7_3 | CDS | 44678901 | 44679050 | 44678901 | ID=Msa1105780-mRNA-1:cds;Parent=Msa1105780-mRNA-1 |
| chr7_3 | CDS | 44676328 | 44676672 | 44676328 | ID=Msa1105780-mRNA-1:cds;Parent=Msa1105780-mRNA-1 |
| chr7_3 | three_prime_UTR | 44676065 | 44676327 | 44676065 | ID=Msa1105780-mRNA-1:three_prime_utr;Parent=Msa1105780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
