Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786970 | sp|Q9SSU8|PSY_DAUCA | 70.844 | 391 | 100 | 3 | 3 | 379 | 4 | 394 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786970 | A0A097KXR7 | 99.225 | 387 | 3 | 0 | 1 | 387 | 1 | 387 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028610 | Msa0786970 | 0.846892 | 1.632520e-59 | -8.615850e-47 |
| Msa0035090 | Msa0786970 | 0.803764 | 2.983760e-49 | -8.615850e-47 |
| Msa0038860 | Msa0786970 | 0.806611 | 7.563283e-50 | -8.615850e-47 |
| Msa0076280 | Msa0786970 | 0.848805 | 4.850006e-60 | -8.615850e-47 |
| Msa0083200 | Msa0786970 | 0.806132 | 9.542203e-50 | -8.615850e-47 |
| Msa0624890 | Msa0786970 | 0.813967 | 1.957344e-51 | -8.615850e-47 |
| Msa0625510 | Msa0786970 | 0.838720 | 2.432307e-57 | -8.615850e-47 |
| Msa0704750 | Msa0786970 | 0.811205 | 7.867382e-51 | -8.615850e-47 |
| Msa0751000 | Msa0786970 | 0.823345 | 1.455898e-53 | -8.615850e-47 |
| Msa0786970 | Msa0794040 | 0.852054 | 5.935519e-61 | -8.615850e-47 |
| Msa0786970 | Msa0822380 | 0.943746 | 6.887733e-103 | -8.615850e-47 |
| Msa0786970 | Msa0855490 | 0.805124 | 1.553368e-49 | -8.615850e-47 |
| Msa0786970 | Msa0907520 | 0.822384 | 2.438518e-53 | -8.615850e-47 |
| Msa0786970 | Msa0981900 | 0.800619 | 1.324085e-48 | -8.615850e-47 |
| Msa0786970 | Msa1044520 | 0.808986 | 2.364905e-50 | -8.615850e-47 |
| Msa0786970 | Msa1084630 | 0.936984 | 7.225195e-98 | -8.615850e-47 |
| Msa0786970 | Msa1132320 | 0.828416 | 9.101544e-55 | -8.615850e-47 |
| Msa0786970 | Msa1173410 | 0.800731 | 1.256253e-48 | -8.615850e-47 |
| Msa0786970 | Msa1198420 | 0.804025 | 2.633429e-49 | -8.615850e-47 |
| Msa0786970 | Msa1199690 | 0.823181 | 1.590032e-53 | -8.615850e-47 |
| Msa0786970 | Msa1204260 | 0.811405 | 7.117274e-51 | -8.615850e-47 |
| Msa0786970 | Msa1264300 | 0.811183 | 7.952332e-51 | -8.615850e-47 |
| Msa0786970 | Msa1316160 | 0.809963 | 1.459054e-50 | -8.615850e-47 |
| Msa0786970 | Msa1368180 | 0.824045 | 9.984624e-54 | -8.615850e-47 |
| Msa0786970 | Msa1373590 | 0.816267 | 6.039536e-52 | -8.615850e-47 |
| Msa0786970 | Msa1385580 | 0.827980 | 1.159154e-54 | -8.615850e-47 |
| Msa0786970 | Msa1400330 | 0.936009 | 3.440235e-97 | -8.615850e-47 |
| Msa0124310 | Msa0786970 | 0.824156 | 9.404760e-54 | -8.615850e-47 |
| Msa0175900 | Msa0786970 | 0.803236 | 3.839410e-49 | -8.615850e-47 |
| Msa0181740 | Msa0786970 | 0.821768 | 3.387928e-53 | -8.615850e-47 |
| Msa0187720 | Msa0786970 | 0.805654 | 1.202375e-49 | -8.615850e-47 |
| Msa0192290 | Msa0786970 | -0.801454 | 8.935322e-49 | -8.615850e-47 |
| Msa0196700 | Msa0786970 | 0.855038 | 8.248209e-62 | -8.615850e-47 |
| Msa0196710 | Msa0786970 | 0.817247 | 3.641215e-52 | -8.615850e-47 |
| Msa0216010 | Msa0786970 | 0.826381 | 2.798663e-54 | -8.615850e-47 |
| Msa0216560 | Msa0786970 | 0.827790 | 1.287872e-54 | -8.615850e-47 |
| Msa0238580 | Msa0786970 | 0.829721 | 4.393634e-55 | -8.615850e-47 |
| Msa0377460 | Msa0786970 | 0.810466 | 1.136897e-50 | -8.615850e-47 |
| Msa0417000 | Msa0786970 | 0.809108 | 2.227447e-50 | -8.615850e-47 |
| Msa0426890 | Msa0786970 | 0.806515 | 7.924048e-50 | -8.615850e-47 |
| Msa0274530 | Msa0786970 | 0.815922 | 7.211474e-52 | -8.615850e-47 |
| Msa0276150 | Msa0786970 | 0.835439 | 1.677449e-56 | -8.615850e-47 |
| Msa0295840 | Msa0786970 | 0.819610 | 1.061073e-52 | -8.615850e-47 |
| Msa0307490 | Msa0786970 | 0.821322 | 4.293507e-53 | -8.615850e-47 |
| Msa0313050 | Msa0786970 | -0.813219 | 2.859071e-51 | -8.615850e-47 |
| Msa0326280 | Msa0786970 | 0.808696 | 2.728759e-50 | -8.615850e-47 |
| Msa0517400 | Msa0786970 | 0.804201 | 2.420442e-49 | -8.615850e-47 |
| Msa0545910 | Msa0786970 | 0.804974 | 1.669375e-49 | -8.615850e-47 |
| Msa0577140 | Msa0786970 | 0.820132 | 8.061873e-53 | -8.615850e-47 |
| Msa0601710 | Msa0786970 | 0.806367 | 8.512977e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786970 | MtrunA17_Chr5g0442671 | 95.866 | 387 | 16 | 0 | 1 | 387 | 1 | 387 | 0.0 | 775 |
| Msa0786970 | MtrunA17_Chr3g0095661 | 80.506 | 395 | 64 | 4 | 1 | 385 | 1 | 392 | 0.0 | 646 |
| Msa0786970 | MtrunA17_Chr5g0433601 | 75.444 | 338 | 79 | 2 | 45 | 381 | 95 | 429 | 0.0 | 535 |
| Msa0786970 | MtrunA17_Chr3g0121311 | 64.329 | 328 | 109 | 2 | 53 | 380 | 57 | 376 | 1.07e-155 | 444 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786970 | AT5G17230.2 | 74.862 | 362 | 75 | 4 | 24 | 377 | 60 | 413 | 0.0 | 553 |
| Msa0786970 | AT5G17230.1 | 74.862 | 362 | 75 | 4 | 24 | 377 | 60 | 413 | 0.0 | 553 |
| Msa0786970 | AT5G17230.4 | 74.862 | 362 | 75 | 4 | 24 | 377 | 60 | 413 | 0.0 | 553 |
| Msa0786970 | AT5G17230.3 | 71.883 | 377 | 75 | 5 | 24 | 377 | 60 | 428 | 0.0 | 543 |
Find 90 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATAATAACTTCACAAAA+AGG | 0.232010 | 5_2:+72598284 | Msa0786970:CDS |
| GCATCATATCATAAACAATT+TGG | 0.245018 | 5_2:-72598386 | None:intergenic |
| CTTTATTGTTACTATGTTGC+TGG | 0.254005 | 5_2:+72597179 | Msa0786970:CDS |
| CTGCTAGTAGATGGCCTGTT+TGG | 0.262238 | 5_2:+72598212 | Msa0786970:CDS |
| CATCGACACATTATTAAAAT+AGG | 0.272413 | 5_2:-72598408 | None:intergenic |
| TGCTAGTAGATGGCCTGTTT+GGG | 0.292262 | 5_2:+72598213 | Msa0786970:CDS |
| TCTGTAGAAGCCTTGGATTC+AGG | 0.303642 | 5_2:-72597242 | None:intergenic |
| TAAGTACCCTGTTGATATTC+AGG | 0.310562 | 5_2:+72596508 | Msa0786970:CDS |
| AGATGTCTAGTATTGTTGTT+AGG | 0.314970 | 5_2:+72594682 | Msa0786970:exon |
| AAGAACGCCGAAAAGCTATA+TGG | 0.335633 | 5_2:+72596186 | Msa0786970:CDS |
| TGTGAAGTTATTATAATCAT+TGG | 0.341584 | 5_2:-72598278 | None:intergenic |
| TTATCACTACCAGCTGCTTA+TGG | 0.342219 | 5_2:+72598334 | Msa0786970:CDS |
| TCAGGTGCTATTCCCATTAC+AGG | 0.342367 | 5_2:-72597224 | None:intergenic |
| ATTATAATCATTGGCTTCAA+TGG | 0.355129 | 5_2:-72598269 | None:intergenic |
| GAGGGAGAAAATAATGAGTT+AGG | 0.356783 | 5_2:-72594605 | None:intergenic |
| AAGAGAAAAGAGTGTAAGAA+TGG | 0.370228 | 5_2:+72594752 | Msa0786970:CDS |
| GTTCTTTGATGAAGCAGAAA+AGG | 0.373517 | 5_2:+72598171 | Msa0786970:CDS |
| TTGGTGGGTATTTCTAGAAT+TGG | 0.377918 | 5_2:+72594726 | Msa0786970:CDS |
| CTCTCCTCTGAACTTCTTGA+AGG | 0.380334 | 5_2:-72594819 | None:intergenic |
| GGGCAGCATTGTTGTTATAT+AGG | 0.386588 | 5_2:+72598233 | Msa0786970:CDS |
| AGAGTGTAAGAATGGGTTCT+AGG | 0.388815 | 5_2:+72594760 | Msa0786970:CDS |
| AAAGCTATATGGGCAATCTA+TGG | 0.391917 | 5_2:+72596197 | Msa0786970:CDS |
| GATGGTTCTCAATGATATAT+AGG | 0.393061 | 5_2:-72594535 | None:intergenic |
| GTGTGATGTGTGAAGCATTT+GGG | 0.394039 | 5_2:-72596391 | None:intergenic |
| CCATTCAAGGACATGATAGA+AGG | 0.398564 | 5_2:+72597104 | Msa0786970:CDS |
| TGAAGTACCTGAATATCAAC+AGG | 0.410981 | 5_2:-72596515 | None:intergenic |
| GGTGTGATGTGTGAAGCATT+TGG | 0.411963 | 5_2:-72596392 | None:intergenic |
| ATGGGTTCTAGGATAAGGTT+TGG | 0.418446 | 5_2:+72594771 | Msa0786970:CDS |
| TAAGAATGGGTTCTAGGATA+AGG | 0.419173 | 5_2:+72594766 | Msa0786970:CDS |
| TCCCATCTGTCCAAGGCTGC+TGG | 0.419670 | 5_2:-72596413 | None:intergenic |
| CTTATGAGTGTTCCTGTAAT+GGG | 0.421342 | 5_2:+72597212 | Msa0786970:CDS |
| GCATAATGTCTTCATCTGAT+AGG | 0.425370 | 5_2:-72598087 | None:intergenic |
| TTTATTGTTACTATGTTGCT+GGG | 0.438390 | 5_2:+72597180 | Msa0786970:CDS |
| TAGGATAAGGTTTGGAAGTG+GGG | 0.438574 | 5_2:+72594779 | Msa0786970:CDS |
| AGCTCAGTTCTGCTAGTAGA+TGG | 0.444906 | 5_2:+72598203 | Msa0786970:CDS |
| GATGTCTAGTATTGTTGTTA+GGG | 0.445851 | 5_2:+72594683 | Msa0786970:exon |
| CTAGGATAAGGTTTGGAAGT+GGG | 0.447585 | 5_2:+72594778 | Msa0786970:CDS |
| TCTTATGAGTGTTCCTGTAA+TGG | 0.447627 | 5_2:+72597211 | Msa0786970:CDS |
| CAGCAACATAGTAACAATAA+AGG | 0.448850 | 5_2:-72597178 | None:intergenic |
| AACAACAATGCTGCCCAAAC+AGG | 0.461744 | 5_2:-72598226 | None:intergenic |
| GCAGCATCAAACATATCATA+TGG | 0.464921 | 5_2:-72596467 | None:intergenic |
| TTATTTGAAATAGCCATTCA+AGG | 0.465866 | 5_2:+72597091 | Msa0786970:intron |
| CCTTCTATCATGTCCTTGAA+TGG | 0.471429 | 5_2:-72597104 | None:intergenic |
| CATCACTCATTACATGAAGT+AGG | 0.476967 | 5_2:+72598558 | Msa0786970:three_prime_UTR |
| CACCAGCAGCCTTGGACAGA+TGG | 0.481447 | 5_2:+72596411 | Msa0786970:CDS |
| TTTGGTGAGAGAAGATAGGA+GGG | 0.481973 | 5_2:+72594872 | Msa0786970:CDS |
| AGAGAAAAGAGTGTAAGAAT+GGG | 0.484304 | 5_2:+72594753 | Msa0786970:CDS |
| AATGCTCTCTGTAGAAGCCT+TGG | 0.487506 | 5_2:-72597249 | None:intergenic |
| CAACAATACTAGACATCTCT+AGG | 0.489143 | 5_2:-72594677 | None:intergenic |
| TTCTTTGATGAAGCAGAAAA+GGG | 0.493216 | 5_2:+72598172 | Msa0786970:CDS |
| AGAACGCCGAAAAGCTATAT+GGG | 0.501743 | 5_2:+72596187 | Msa0786970:CDS |
| ACACATCACACCAGCAGCCT+TGG | 0.504549 | 5_2:+72596403 | Msa0786970:CDS |
| TCTAGGATAAGGTTTGGAAG+TGG | 0.507067 | 5_2:+72594777 | Msa0786970:CDS |
| AGAACTGATGAACTAGTAGA+TGG | 0.508686 | 5_2:+72596368 | Msa0786970:CDS |
| GAGCATTTATAATGCTGCAT+TGG | 0.509388 | 5_2:+72597265 | Msa0786970:CDS |
| CATGATAGAAGGGATGAGGA+TGG | 0.512203 | 5_2:+72597115 | Msa0786970:CDS |
| TTCAAGAAGTTCAGAGGAGA+GGG | 0.515940 | 5_2:+72594821 | Msa0786970:CDS |
| TATAATGCTGCATTGGCACT+AGG | 0.516591 | 5_2:+72597272 | Msa0786970:CDS |
| TATTGAATTCTGCTTATGAT+CGG | 0.518807 | 5_2:+72594955 | Msa0786970:CDS |
| TACTATGTTGCTGGGACAGT+AGG | 0.527506 | 5_2:+72597188 | Msa0786970:CDS |
| CTTGTGCTAGCTCATCTTGA+GGG | 0.529549 | 5_2:-72598060 | None:intergenic |
| ACCAGCAGCCTTGGACAGAT+GGG | 0.533995 | 5_2:+72596412 | Msa0786970:CDS |
| ACCAATGTACTCAGAGATGT+TGG | 0.536558 | 5_2:+72597311 | Msa0786970:CDS |
| CAGGTTTGGTGAGAGAAGAT+AGG | 0.541572 | 5_2:+72594868 | Msa0786970:CDS |
| GTTTGGTGAGAGAAGATAGG+AGG | 0.542876 | 5_2:+72594871 | Msa0786970:CDS |
| GTGGAAAAGTAACAGACAAA+TGG | 0.545459 | 5_2:+72598110 | Msa0786970:CDS |
| CAAGATGAGCTAGCACAAGC+TGG | 0.546911 | 5_2:+72598064 | Msa0786970:CDS |
| CATTCAAGGACATGATAGAA+GGG | 0.552755 | 5_2:+72597105 | Msa0786970:CDS |
| GGGAATAGCACCTGAATCCA+AGG | 0.561665 | 5_2:+72597232 | Msa0786970:CDS |
| GAATTGTGATGCAAAATCAT+TGG | 0.562271 | 5_2:+72594707 | Msa0786970:CDS |
| CAAATGGAGAAATTTCATGA+AGG | 0.564295 | 5_2:+72598126 | Msa0786970:CDS |
| AGGACATGATAGAAGGGATG+AGG | 0.567252 | 5_2:+72597111 | Msa0786970:CDS |
| TGTTACTCTTCAATACATGT+TGG | 0.568169 | 5_2:-72598531 | None:intergenic |
| CCGTTGCTCCCATCTGTCCA+AGG | 0.572170 | 5_2:-72596420 | None:intergenic |
| GCTTGTGCTAGCTCATCTTG+AGG | 0.572873 | 5_2:-72598061 | None:intergenic |
| GATTATGATAGTGCTAGAAG+AGG | 0.580690 | 5_2:+72598025 | Msa0786970:intron |
| AAATGGAGAAATTTCATGAA+GGG | 0.583483 | 5_2:+72598127 | Msa0786970:CDS |
| AGGATAAGGTTTGGAAGTGG+GGG | 0.586634 | 5_2:+72594780 | Msa0786970:CDS |
| AGTGCAGTTCCATAAGCAGC+TGG | 0.587800 | 5_2:-72598343 | None:intergenic |
| TACTAGGAAAGGAGTACCAA+AGG | 0.591959 | 5_2:-72598586 | None:intergenic |
| TCCAACATCTCTGAGTACAT+TGG | 0.600376 | 5_2:-72597312 | None:intergenic |
| CTTCAAGAAGTTCAGAGGAG+AGG | 0.613107 | 5_2:+72594820 | Msa0786970:CDS |
| AGAACCTTCAAGAAGTTCAG+AGG | 0.614687 | 5_2:+72594815 | Msa0786970:CDS |
| TTGTGATGCAAAATCATTGG+TGG | 0.618059 | 5_2:+72594710 | Msa0786970:CDS |
| CCTTGGACAGATGGGAGCAA+CGG | 0.633759 | 5_2:+72596420 | Msa0786970:CDS |
| TGTGATGCAAAATCATTGGT+GGG | 0.648026 | 5_2:+72594711 | Msa0786970:CDS |
| TCAGATGAAGACATTATGCG+TGG | 0.650440 | 5_2:+72598091 | Msa0786970:CDS |
| TTGGTGAGAGAAGATAGGAG+GGG | 0.683654 | 5_2:+72594873 | Msa0786970:CDS |
| AATTCTGCTTATGATCGGTG+TGG | 0.729934 | 5_2:+72594960 | Msa0786970:CDS |
| GAAGTACCTGAATATCAACA+GGG | 0.777322 | 5_2:-72596514 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATGTTATTTTTATTTTTT+TGG | - | chr5_2:72596274-72596293 | None:intergenic | 10.0% |
| !!! | ATTTCTCTTTTTATTTAATA+CGG | + | chr5_2:72597538-72597557 | Msa0786970:intron | 10.0% |
| !! | ATAACAATAGTTAAATAAAA+AGG | + | chr5_2:72597716-72597735 | Msa0786970:intron | 10.0% |
| !! | AAAAAAAAAAAGTGATTGTA+AGG | - | chr5_2:72594515-72594534 | None:intergenic | 15.0% |
| !! | GATTAAATTCAATTGAATAT+TGG | - | chr5_2:72595124-72595143 | None:intergenic | 15.0% |
| !!! | TTATTTTACACTTAATTGAA+TGG | + | chr5_2:72595333-72595352 | Msa0786970:intron | 15.0% |
| !!! | GAAAAAATAAACATTTTCAA+TGG | - | chr5_2:72595643-72595662 | None:intergenic | 15.0% |
| !!! | TGAAAATGTTTATTTTTTCA+TGG | + | chr5_2:72595644-72595663 | Msa0786970:intron | 15.0% |
| !!! | AAATATTTTGTTGTGTTTAA+TGG | - | chr5_2:72595821-72595840 | None:intergenic | 15.0% |
| !! | ACCAAAAAAAAAATTAAGTT+AGG | + | chr5_2:72595946-72595965 | Msa0786970:intron | 15.0% |
| !!! | TCCTAACTTAATTTTTTTTT+TGG | - | chr5_2:72595950-72595969 | None:intergenic | 15.0% |
| !!! | ATTAAGTCCTTTTTTTTTTT+TGG | + | chr5_2:72596302-72596321 | Msa0786970:intron | 15.0% |
| !!! | AAGTGAATTTTTTTAGTTTT+TGG | - | chr5_2:72596727-72596746 | None:intergenic | 15.0% |
| !!! | TTGAAATAGTATATAGTTTT+TGG | - | chr5_2:72597380-72597399 | None:intergenic | 15.0% |
| !!! | TTTCTCTTTTTATTTAATAC+GGG | + | chr5_2:72597539-72597558 | Msa0786970:intron | 15.0% |
| !! | ATTATAATAACTTCACAAAA+AGG | + | chr5_2:72598284-72598303 | Msa0786970:CDS | 15.0% |
| !! | TTATAATAACTTCACAAAAA+GGG | + | chr5_2:72598285-72598304 | Msa0786970:CDS | 15.0% |
| !! | TAGAAAATAAAACTTCTATC+TGG | - | chr5_2:72595766-72595785 | None:intergenic | 20.0% |
| !!! | GAAGTTATTTCAATTAAGTT+AGG | + | chr5_2:72595915-72595934 | Msa0786970:intron | 20.0% |
| !! | CATCAAAATACATTATTGAA+GGG | - | chr5_2:72596009-72596028 | None:intergenic | 20.0% |
| !! | ACATCAAAATACATTATTGA+AGG | - | chr5_2:72596010-72596029 | None:intergenic | 20.0% |
| !!! | CAATAATGTATTTTGATGTT+AGG | + | chr5_2:72596011-72596030 | Msa0786970:intron | 20.0% |
| !!! | GTATTTTGGAGTATATTTTT+TGG | + | chr5_2:72596064-72596083 | Msa0786970:intron | 20.0% |
| !!! | TATATTTTTTGGATGGATTT+GGG | + | chr5_2:72596075-72596094 | Msa0786970:intron | 20.0% |
| !! | ATCTTTCAATTGTACAATTT+AGG | + | chr5_2:72596146-72596165 | Msa0786970:intron | 20.0% |
| !!! | TTGATGATGATATCATAATT+TGG | - | chr5_2:72596251-72596270 | None:intergenic | 20.0% |
| !! | TTCCAAACCAAAAAAAAAAA+AGG | - | chr5_2:72596312-72596331 | None:intergenic | 20.0% |
| !!! | AAGGTTGAGATTTAAATTTT+AGG | - | chr5_2:72596550-72596569 | None:intergenic | 20.0% |
| !! | TATATGAAACATGTAATGTA+AGG | - | chr5_2:72596569-72596588 | None:intergenic | 20.0% |
| !!! | TGAATTTTTTTAGTTTTTGG+TGG | - | chr5_2:72596724-72596743 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACAATTGTGTG+TGG | - | chr5_2:72596813-72596832 | None:intergenic | 20.0% |
| !!! | CACACAATTGTTTTTTTTTT+AGG | + | chr5_2:72596813-72596832 | Msa0786970:intron | 20.0% |
| !! | AAAATTGATCTTATTGACAT+TGG | + | chr5_2:72597063-72597082 | Msa0786970:intron | 20.0% |
| !! | TTGAAATTAAATTCCTTTCT+TGG | + | chr5_2:72597593-72597612 | Msa0786970:intron | 20.0% |
| !! | TGAAATTAAATTCCTTTCTT+GGG | + | chr5_2:72597594-72597613 | Msa0786970:intron | 20.0% |
| !!! | ATAATGTATTGACAAATTCA+TGG | - | chr5_2:72597822-72597841 | None:intergenic | 20.0% |
| !! | TGTGAAGTTATTATAATCAT+TGG | - | chr5_2:72598281-72598300 | None:intergenic | 20.0% |
| !!! | AACAATTTGGTTAACTTTTT+AGG | - | chr5_2:72598376-72598395 | None:intergenic | 20.0% |
| !!! | CACTTTTTTTTTAATCTCGA+TGG | - | chr5_2:72594556-72594575 | None:intergenic | 25.0% |
| !!! | TGAAATGAAGAGTTTTTTAG+TGG | - | chr5_2:72594647-72594666 | None:intergenic | 25.0% |
| !!! | GATTTTGAGAAAACAATTGA+AGG | + | chr5_2:72594912-72594931 | Msa0786970:CDS | 25.0% |
| ! | TATTGAATTCTGCTTATGAT+CGG | + | chr5_2:72594955-72594974 | Msa0786970:CDS | 25.0% |
| ! | AGAAAGAAAGAAAAATACCT+AGG | - | chr5_2:72595019-72595038 | None:intergenic | 25.0% |
| ! | ATTGGAAATTCTGAATATTG+TGG | - | chr5_2:72595106-72595125 | None:intergenic | 25.0% |
| !! | CATTTTTCGTAAGTTTCATT+GGG | + | chr5_2:72595144-72595163 | Msa0786970:intron | 25.0% |
| !! | ATTTTTCGTAAGTTTCATTG+GGG | + | chr5_2:72595145-72595164 | Msa0786970:intron | 25.0% |
| ! | TATAATGCATTAGATAACAG+AGG | + | chr5_2:72595689-72595708 | Msa0786970:intron | 25.0% |
| ! | ATAATGCATTAGATAACAGA+GGG | + | chr5_2:72595690-72595709 | Msa0786970:intron | 25.0% |
| !!! | ATGGAGGAAATTTTAAGTAT+TGG | - | chr5_2:72595802-72595821 | None:intergenic | 25.0% |
| !!! | TATTTTGTTGTGTTTAATGG+AGG | - | chr5_2:72595818-72595837 | None:intergenic | 25.0% |
| !! | TGGTTAGATCATTAGTATTT+TGG | + | chr5_2:72596050-72596069 | Msa0786970:intron | 25.0% |
| !!! | TTTGGAGTATATTTTTTGGA+TGG | + | chr5_2:72596068-72596087 | Msa0786970:intron | 25.0% |
| !!! | GTATATTTTTTGGATGGATT+TGG | + | chr5_2:72596074-72596093 | Msa0786970:intron | 25.0% |
| !!! | GTCCTTTTTTTTTTTTGGTT+TGG | + | chr5_2:72596307-72596326 | Msa0786970:intron | 25.0% |
| ! | CATAATATATGAAAGATCTG+AGG | + | chr5_2:72596683-72596702 | Msa0786970:intron | 25.0% |
| !!! | ATTTTTTTAGTTTTTGGTGG+TGG | - | chr5_2:72596721-72596740 | None:intergenic | 25.0% |
| !!! | AACGTCAAAGTTGATTTTAA+AGG | + | chr5_2:72596752-72596771 | Msa0786970:intron | 25.0% |
| ! | ACAATTAAGTGTGTGAATTT+CGG | - | chr5_2:72596877-72596896 | None:intergenic | 25.0% |
| !! | TTATTTGAAATAGCCATTCA+AGG | + | chr5_2:72597091-72597110 | Msa0786970:intron | 25.0% |
| ! | TTTATTGTTACTATGTTGCT+GGG | + | chr5_2:72597180-72597199 | Msa0786970:CDS | 25.0% |
| ! | GAAATTAAATTCCTTTCTTG+GGG | + | chr5_2:72597595-72597614 | Msa0786970:intron | 25.0% |
| ! | TCTTAATACCTTCTAACTAA+AGG | + | chr5_2:72597654-72597673 | Msa0786970:intron | 25.0% |
| ! | CTTAATACCTTCTAACTAAA+GGG | + | chr5_2:72597655-72597674 | Msa0786970:intron | 25.0% |
| !! | TTTTCCCAATGACTTTAATT+AGG | + | chr5_2:72597844-72597863 | Msa0786970:intron | 25.0% |
| ! | TGAACCTAATTAAAGTCATT+GGG | - | chr5_2:72597851-72597870 | None:intergenic | 25.0% |
| ! | ATGAACCTAATTAAAGTCAT+TGG | - | chr5_2:72597852-72597871 | None:intergenic | 25.0% |
| ! | AAATGGAGAAATTTCATGAA+GGG | + | chr5_2:72598127-72598146 | Msa0786970:CDS | 25.0% |
| !!! | ATTATAATCATTGGCTTCAA+TGG | - | chr5_2:72598272-72598291 | None:intergenic | 25.0% |
| ! | GCATCATATCATAAACAATT+TGG | - | chr5_2:72598389-72598408 | None:intergenic | 25.0% |
| ! | CATCGACACATTATTAAAAT+AGG | - | chr5_2:72598411-72598430 | None:intergenic | 25.0% |
| GATGGTTCTCAATGATATAT+AGG | - | chr5_2:72594538-72594557 | None:intergenic | 30.0% | |
| GGACACTATAAAAAAAGAGA+GGG | - | chr5_2:72594626-72594645 | None:intergenic | 30.0% | |
| TGGACACTATAAAAAAAGAG+AGG | - | chr5_2:72594627-72594646 | None:intergenic | 30.0% | |
| ! | AGATGTCTAGTATTGTTGTT+AGG | + | chr5_2:72594682-72594701 | Msa0786970:exon | 30.0% |
| ! | GATGTCTAGTATTGTTGTTA+GGG | + | chr5_2:72594683-72594702 | Msa0786970:exon | 30.0% |
| GAATTGTGATGCAAAATCAT+TGG | + | chr5_2:72594707-72594726 | Msa0786970:CDS | 30.0% | |
| ! | AAGAGAAAAGAGTGTAAGAA+TGG | + | chr5_2:72594752-72594771 | Msa0786970:CDS | 30.0% |
| ! | AGAGAAAAGAGTGTAAGAAT+GGG | + | chr5_2:72594753-72594772 | Msa0786970:CDS | 30.0% |
| !! | ATTGAAGGTGATTTTAGCAA+TGG | + | chr5_2:72594927-72594946 | Msa0786970:CDS | 30.0% |
| AATACCTAGGTAAAAAGTCT+TGG | - | chr5_2:72595006-72595025 | None:intergenic | 30.0% | |
| CCAATGAAACTTACGAAAAA+TGG | - | chr5_2:72595146-72595165 | None:intergenic | 30.0% | |
| !! | CCATTTTTCGTAAGTTTCAT+TGG | + | chr5_2:72595143-72595162 | Msa0786970:intron | 30.0% |
| ! | TTTTTCGTAAGTTTCATTGG+GGG | + | chr5_2:72595146-72595165 | Msa0786970:intron | 30.0% |
| TCTTCATTCTTGAATATGTG+TGG | - | chr5_2:72595183-72595202 | None:intergenic | 30.0% | |
| ACTGAGTCTATGAAAGTTAT+TGG | + | chr5_2:72595376-72595395 | Msa0786970:intron | 30.0% | |
| CTGAGTCTATGAAAGTTATT+GGG | + | chr5_2:72595377-72595396 | Msa0786970:intron | 30.0% | |
| AATGAGTCAATGGAAGTTAA+AGG | + | chr5_2:72595402-72595421 | Msa0786970:intron | 30.0% | |
| GTTAGGAAAGCAATTAAGTT+AGG | + | chr5_2:72595963-72595982 | Msa0786970:intron | 30.0% | |
| ATTGAAGGGTCTATATCAAT+TGG | - | chr5_2:72595995-72596014 | None:intergenic | 30.0% | |
| ACTAAACATACACTTAGTTG+TGG | - | chr5_2:72596620-72596639 | None:intergenic | 30.0% | |
| ATTAATTTCACCCACGAAAA+AGG | + | chr5_2:72596781-72596800 | Msa0786970:intron | 30.0% | |
| ! | TTTGTTATATGTAGACGAAG+TGG | + | chr5_2:72596842-72596861 | Msa0786970:intron | 30.0% |
| CAATATCGATAATGTTAGGT+TGG | - | chr5_2:72596932-72596951 | None:intergenic | 30.0% | |
| CAGACAATATCGATAATGTT+AGG | - | chr5_2:72596936-72596955 | None:intergenic | 30.0% | |
| CAGCAACATAGTAACAATAA+AGG | - | chr5_2:72597181-72597200 | None:intergenic | 30.0% | |
| CTTTATTGTTACTATGTTGC+TGG | + | chr5_2:72597179-72597198 | Msa0786970:CDS | 30.0% | |
| !! | TCAAAGATTAGTCTCATAGT+GGG | - | chr5_2:72597500-72597519 | None:intergenic | 30.0% |
| TATGAGACTAATCTTTGAGT+CGG | + | chr5_2:72597502-72597521 | Msa0786970:intron | 30.0% | |
| AAAGAGAAATCAATGTCTCA+CGG | - | chr5_2:72597528-72597547 | None:intergenic | 30.0% | |
| TAAGAAACCAACATGATGTT+CGG | - | chr5_2:72597639-72597658 | None:intergenic | 30.0% | |
| CAAATGGAGAAATTTCATGA+AGG | + | chr5_2:72598126-72598145 | Msa0786970:CDS | 30.0% | |
| TTCTTTGATGAAGCAGAAAA+GGG | + | chr5_2:72598172-72598191 | Msa0786970:CDS | 30.0% | |
| TGTTACTCTTCAATACATGT+TGG | - | chr5_2:72598534-72598553 | None:intergenic | 30.0% | |
| GAGGGAGAAAATAATGAGTT+AGG | - | chr5_2:72594608-72594627 | None:intergenic | 35.0% | |
| CAACAATACTAGACATCTCT+AGG | - | chr5_2:72594680-72594699 | None:intergenic | 35.0% | |
| TTGTGATGCAAAATCATTGG+TGG | + | chr5_2:72594710-72594729 | Msa0786970:CDS | 35.0% | |
| TGTGATGCAAAATCATTGGT+GGG | + | chr5_2:72594711-72594730 | Msa0786970:CDS | 35.0% | |
| !! | TTGGTGGGTATTTCTAGAAT+TGG | + | chr5_2:72594726-72594745 | Msa0786970:CDS | 35.0% |
| !! | TAAGAATGGGTTCTAGGATA+AGG | + | chr5_2:72594766-72594785 | Msa0786970:CDS | 35.0% |
| ! | TATGCCAAGACTTTTTACCT+AGG | + | chr5_2:72594999-72595018 | Msa0786970:CDS | 35.0% |
| TTATTGGGAGAATGAGTCAA+TGG | + | chr5_2:72595392-72595411 | Msa0786970:intron | 35.0% | |
| TTTCATGGAGTGATTATGAG+AGG | + | chr5_2:72595659-72595678 | Msa0786970:intron | 35.0% | |
| !! | GAGTTGATAGAAAACGATGA+TGG | - | chr5_2:72595738-72595757 | None:intergenic | 35.0% |
| ATGTTAGGCAAGCAATTAAG+TGG | + | chr5_2:72596026-72596045 | Msa0786970:intron | 35.0% | |
| ! | AGATTGCCCATATAGCTTTT+CGG | - | chr5_2:72596196-72596215 | None:intergenic | 35.0% |
| AAAGCTATATGGGCAATCTA+TGG | + | chr5_2:72596197-72596216 | Msa0786970:CDS | 35.0% | |
| TTTCATTGTGCATTGCAGTA+TGG | + | chr5_2:72596339-72596358 | Msa0786970:intron | 35.0% | |
| AGAACTGATGAACTAGTAGA+TGG | + | chr5_2:72596368-72596387 | Msa0786970:CDS | 35.0% | |
| GCAGCATCAAACATATCATA+TGG | - | chr5_2:72596470-72596489 | None:intergenic | 35.0% | |
| TAAGTACCCTGTTGATATTC+AGG | + | chr5_2:72596508-72596527 | Msa0786970:CDS | 35.0% | |
| ! | GAAGTACCTGAATATCAACA+GGG | - | chr5_2:72596517-72596536 | None:intergenic | 35.0% |
| ! | TGAAGTACCTGAATATCAAC+AGG | - | chr5_2:72596518-72596537 | None:intergenic | 35.0% |
| ATTAAGTGTGTGAATTTCGG+CGG | - | chr5_2:72596874-72596893 | None:intergenic | 35.0% | |
| ! | TGAGATTCCGAATTTGAGTT+CGG | + | chr5_2:72596896-72596915 | Msa0786970:intron | 35.0% |
| TCGATATTGTCTGTTGAGTT+AGG | + | chr5_2:72596943-72596962 | Msa0786970:intron | 35.0% | |
| CATTCAAGGACATGATAGAA+GGG | + | chr5_2:72597105-72597124 | Msa0786970:CDS | 35.0% | |
| TCTTATGAGTGTTCCTGTAA+TGG | + | chr5_2:72597211-72597230 | Msa0786970:CDS | 35.0% | |
| CTTATGAGTGTTCCTGTAAT+GGG | + | chr5_2:72597212-72597231 | Msa0786970:CDS | 35.0% | |
| GAGCATTTATAATGCTGCAT+TGG | + | chr5_2:72597265-72597284 | Msa0786970:CDS | 35.0% | |
| !! | CTCAAAGATTAGTCTCATAG+TGG | - | chr5_2:72597501-72597520 | None:intergenic | 35.0% |
| AAGAAACCAACATGATGTTC+GGG | - | chr5_2:72597638-72597657 | None:intergenic | 35.0% | |
| ! | GATTATGATAGTGCTAGAAG+AGG | + | chr5_2:72598025-72598044 | Msa0786970:intron | 35.0% |
| GCATAATGTCTTCATCTGAT+AGG | - | chr5_2:72598090-72598109 | None:intergenic | 35.0% | |
| GTGGAAAAGTAACAGACAAA+TGG | + | chr5_2:72598110-72598129 | Msa0786970:CDS | 35.0% | |
| GTTCTTTGATGAAGCAGAAA+AGG | + | chr5_2:72598171-72598190 | Msa0786970:CDS | 35.0% | |
| TTCACAAAAAGGGCTTATGT+TGG | + | chr5_2:72598295-72598314 | Msa0786970:CDS | 35.0% | |
| CATCACTCATTACATGAAGT+AGG | + | chr5_2:72598558-72598577 | Msa0786970:three_prime_UTR | 35.0% | |
| ! | CATGAAGTAGGTTTTTCCTT+TGG | + | chr5_2:72598570-72598589 | Msa0786970:three_prime_UTR | 35.0% |
| ! | AGAGTGTAAGAATGGGTTCT+AGG | + | chr5_2:72594760-72594779 | Msa0786970:CDS | 40.0% |
| !! | ATGGGTTCTAGGATAAGGTT+TGG | + | chr5_2:72594771-72594790 | Msa0786970:CDS | 40.0% |
| ! | TCTAGGATAAGGTTTGGAAG+TGG | + | chr5_2:72594777-72594796 | Msa0786970:CDS | 40.0% |
| CTAGGATAAGGTTTGGAAGT+GGG | + | chr5_2:72594778-72594797 | Msa0786970:CDS | 40.0% | |
| TAGGATAAGGTTTGGAAGTG+GGG | + | chr5_2:72594779-72594798 | Msa0786970:CDS | 40.0% | |
| AGAACCTTCAAGAAGTTCAG+AGG | + | chr5_2:72594815-72594834 | Msa0786970:CDS | 40.0% | |
| TTCAAGAAGTTCAGAGGAGA+GGG | + | chr5_2:72594821-72594840 | Msa0786970:CDS | 40.0% | |
| !!! | GAAGTAGTTTTGAAGCAAGC+AGG | + | chr5_2:72594849-72594868 | Msa0786970:CDS | 40.0% |
| !!! | AGTTTTGAAGCAAGCAGGTT+TGG | + | chr5_2:72594854-72594873 | Msa0786970:CDS | 40.0% |
| TTTGGTGAGAGAAGATAGGA+GGG | + | chr5_2:72594872-72594891 | Msa0786970:CDS | 40.0% | |
| AATTCTGCTTATGATCGGTG+TGG | + | chr5_2:72594960-72594979 | Msa0786970:CDS | 40.0% | |
| TAGGCAAGCAATTAAGTGGT+TGG | + | chr5_2:72596030-72596049 | Msa0786970:intron | 40.0% | |
| AAGAACGCCGAAAAGCTATA+TGG | + | chr5_2:72596186-72596205 | Msa0786970:CDS | 40.0% | |
| AGAACGCCGAAAAGCTATAT+GGG | + | chr5_2:72596187-72596206 | Msa0786970:CDS | 40.0% | |
| ! | GTGTGATGTGTGAAGCATTT+GGG | - | chr5_2:72596394-72596413 | None:intergenic | 40.0% |
| !!! | TTTTAGTTTTTGGTGGTGGC+CGG | - | chr5_2:72596717-72596736 | None:intergenic | 40.0% |
| CCTTCTATCATGTCCTTGAA+TGG | - | chr5_2:72597107-72597126 | None:intergenic | 40.0% | |
| CCATTCAAGGACATGATAGA+AGG | + | chr5_2:72597104-72597123 | Msa0786970:CDS | 40.0% | |
| ! | TATAATGCTGCATTGGCACT+AGG | + | chr5_2:72597272-72597291 | Msa0786970:CDS | 40.0% |
| ACCAATGTACTCAGAGATGT+TGG | + | chr5_2:72597311-72597330 | Msa0786970:CDS | 40.0% | |
| TCCAACATCTCTGAGTACAT+TGG | - | chr5_2:72597315-72597334 | None:intergenic | 40.0% | |
| TTTCTAACCCACCGAAACTA+GGG | + | chr5_2:72597421-72597440 | Msa0786970:intron | 40.0% | |
| TATAAGACCCTAGTTTCGGT+GGG | - | chr5_2:72597431-72597450 | None:intergenic | 40.0% | |
| ! | ATAGATTAAGGCGTCTATGG+CGG | - | chr5_2:72597454-72597473 | None:intergenic | 40.0% |
| CATAGACGCCTTAATCTATG+CGG | + | chr5_2:72597455-72597474 | Msa0786970:intron | 40.0% | |
| TGAGTTGTCCGCATAGATTA+AGG | - | chr5_2:72597466-72597485 | None:intergenic | 40.0% | |
| ATTCCTGAAGTTCATCAGAG+AGG | - | chr5_2:72597574-72597593 | None:intergenic | 40.0% | |
| AGAAACCAACATGATGTTCG+GGG | - | chr5_2:72597637-72597656 | None:intergenic | 40.0% | |
| ! | AAGGTTTTCATTCTCGCGAT+CGG | + | chr5_2:72597735-72597754 | Msa0786970:intron | 40.0% |
| TCAGATGAAGACATTATGCG+TGG | + | chr5_2:72598091-72598110 | Msa0786970:CDS | 40.0% | |
| ! | GGGCAGCATTGTTGTTATAT+AGG | + | chr5_2:72598233-72598252 | Msa0786970:CDS | 40.0% |
| TTATCACTACCAGCTGCTTA+TGG | + | chr5_2:72598334-72598353 | Msa0786970:CDS | 40.0% | |
| ! | GCTTATGGAACTGCACTTTT+AGG | + | chr5_2:72598349-72598368 | Msa0786970:CDS | 40.0% |
| AGGATAAGGTTTGGAAGTGG+GGG | + | chr5_2:72594780-72594799 | Msa0786970:CDS | 45.0% | |
| CTCTCCTCTGAACTTCTTGA+AGG | - | chr5_2:72594822-72594841 | None:intergenic | 45.0% | |
| CTTCAAGAAGTTCAGAGGAG+AGG | + | chr5_2:72594820-72594839 | Msa0786970:CDS | 45.0% | |
| !! | CAGGTTTGGTGAGAGAAGAT+AGG | + | chr5_2:72594868-72594887 | Msa0786970:CDS | 45.0% |
| ! | GTTTGGTGAGAGAAGATAGG+AGG | + | chr5_2:72594871-72594890 | Msa0786970:CDS | 45.0% |
| TTGGTGAGAGAAGATAGGAG+GGG | + | chr5_2:72594873-72594892 | Msa0786970:CDS | 45.0% | |
| ATCACTTAGACCATCCCCAA+TGG | + | chr5_2:72595601-72595620 | Msa0786970:intron | 45.0% | |
| ACACTAAGACCTCACCATTG+GGG | - | chr5_2:72595618-72595637 | None:intergenic | 45.0% | |
| GACACTAAGACCTCACCATT+GGG | - | chr5_2:72595619-72595638 | None:intergenic | 45.0% | |
| AGACACTAAGACCTCACCAT+TGG | - | chr5_2:72595620-72595639 | None:intergenic | 45.0% | |
| ! | GGTGTGATGTGTGAAGCATT+TGG | - | chr5_2:72596395-72596414 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr5_2:72596654-72596673 | Msa0786970:intron | 45.0% |
| ! | AAGATCTGAGGTTCAAACCC+CGG | + | chr5_2:72596695-72596714 | Msa0786970:intron | 45.0% |
| !!! | TTTAGTTTTTGGTGGTGGCC+GGG | - | chr5_2:72596716-72596735 | None:intergenic | 45.0% |
| !! | GTGGTCTTCTCCTTTTTCGT+GGG | - | chr5_2:72596794-72596813 | None:intergenic | 45.0% |
| !! | TGTGGTCTTCTCCTTTTTCG+TGG | - | chr5_2:72596795-72596814 | None:intergenic | 45.0% |
| CCTTCGTCCGAACTCAAATT+CGG | - | chr5_2:72596906-72596925 | None:intergenic | 45.0% | |
| GTCTGTTGAGTTAGGCCTTA+CGG | + | chr5_2:72596951-72596970 | Msa0786970:intron | 45.0% | |
| AGACAATCGTGTAGTCCGTA+AGG | - | chr5_2:72596969-72596988 | None:intergenic | 45.0% | |
| AGGACATGATAGAAGGGATG+AGG | + | chr5_2:72597111-72597130 | Msa0786970:CDS | 45.0% | |
| CATGATAGAAGGGATGAGGA+TGG | + | chr5_2:72597115-72597134 | Msa0786970:CDS | 45.0% | |
| TACTATGTTGCTGGGACAGT+AGG | + | chr5_2:72597188-72597207 | Msa0786970:CDS | 45.0% | |
| !! | TCAGGTGCTATTCCCATTAC+AGG | - | chr5_2:72597227-72597246 | None:intergenic | 45.0% |
| TCTGTAGAAGCCTTGGATTC+AGG | - | chr5_2:72597245-72597264 | None:intergenic | 45.0% | |
| AATGCTCTCTGTAGAAGCCT+TGG | - | chr5_2:72597252-72597271 | None:intergenic | 45.0% | |
| CTTTCTAACCCACCGAAACT+AGG | + | chr5_2:72597420-72597439 | Msa0786970:intron | 45.0% | |
| GTATAAGACCCTAGTTTCGG+TGG | - | chr5_2:72597432-72597451 | None:intergenic | 45.0% | |
| GCGGTATAAGACCCTAGTTT+CGG | - | chr5_2:72597435-72597454 | None:intergenic | 45.0% | |
| ! | CGCATAGATTAAGGCGTCTA+TGG | - | chr5_2:72597457-72597476 | None:intergenic | 45.0% |
| CTACCTCTCTGATGAACTTC+AGG | + | chr5_2:72597568-72597587 | Msa0786970:intron | 45.0% | |
| GTAACACTCTTCCCCAAGAA+AGG | - | chr5_2:72597609-72597628 | None:intergenic | 45.0% | |
| CGAGAAGCCCTTTAGTTAGA+AGG | - | chr5_2:72597665-72597684 | None:intergenic | 45.0% | |
| CTTGTGCTAGCTCATCTTGA+GGG | - | chr5_2:72598063-72598082 | None:intergenic | 45.0% | |
| AGCTCAGTTCTGCTAGTAGA+TGG | + | chr5_2:72598203-72598222 | Msa0786970:CDS | 45.0% | |
| TGCTAGTAGATGGCCTGTTT+GGG | + | chr5_2:72598213-72598232 | Msa0786970:CDS | 45.0% | |
| AACAACAATGCTGCCCAAAC+AGG | - | chr5_2:72598229-72598248 | None:intergenic | 45.0% | |
| !!! | ATTTCTTTTTTTTTTTTTTT+TGG | + | chr5_2:72595050-72595069 | Msa0786970:intron | 5.0% |
| !! | AAAATTTACTTATTATTTAT+TGG | + | chr5_2:72595506-72595525 | Msa0786970:intron | 5.0% |
| !! | ATTAAATATATATTAGTAAT+TGG | - | chr5_2:72595855-72595874 | None:intergenic | 5.0% |
| TTAGACCATCCCCAATGGTG+AGG | + | chr5_2:72595606-72595625 | Msa0786970:intron | 50.0% | |
| TAAGACCTCACCATTGGGGA+TGG | - | chr5_2:72595614-72595633 | None:intergenic | 50.0% | |
| TCTCGTGAGCTTAGCTCAGT+TGG | + | chr5_2:72596649-72596668 | Msa0786970:intron | 50.0% | |
| !!! | TTAGTTTTTGGTGGTGGCCG+GGG | - | chr5_2:72596715-72596734 | None:intergenic | 50.0% |
| ! | CCGAATTTGAGTTCGGACGA+AGG | + | chr5_2:72596903-72596922 | Msa0786970:intron | 50.0% |
| GGGAATAGCACCTGAATCCA+AGG | + | chr5_2:72597232-72597251 | Msa0786970:CDS | 50.0% | |
| CAACATGATGTTCGGGGAGT+TGG | - | chr5_2:72597631-72597650 | None:intergenic | 50.0% | |
| CAACTCCCCGAACATCATGT+TGG | + | chr5_2:72597629-72597648 | Msa0786970:intron | 50.0% | |
| GCTTGTGCTAGCTCATCTTG+AGG | - | chr5_2:72598064-72598083 | None:intergenic | 50.0% | |
| CAAGATGAGCTAGCACAAGC+TGG | + | chr5_2:72598064-72598083 | Msa0786970:CDS | 50.0% | |
| CTGCTAGTAGATGGCCTGTT+TGG | + | chr5_2:72598212-72598231 | Msa0786970:CDS | 50.0% | |
| AGTGCAGTTCCATAAGCAGC+TGG | - | chr5_2:72598346-72598365 | None:intergenic | 50.0% | |
| ACACATCACACCAGCAGCCT+TGG | + | chr5_2:72596403-72596422 | Msa0786970:CDS | 55.0% | |
| ACCAGCAGCCTTGGACAGAT+GGG | + | chr5_2:72596412-72596431 | Msa0786970:CDS | 55.0% | |
| CCTTGGACAGATGGGAGCAA+CGG | + | chr5_2:72596420-72596439 | Msa0786970:CDS | 55.0% | |
| ! | GTTTGGAAGTGGGGGTGCAG+TGG | + | chr5_2:72594788-72594807 | Msa0786970:CDS | 60.0% |
| CACCAGCAGCCTTGGACAGA+TGG | + | chr5_2:72596411-72596430 | Msa0786970:CDS | 60.0% | |
| TCCCATCTGTCCAAGGCTGC+TGG | - | chr5_2:72596416-72596435 | None:intergenic | 60.0% | |
| CCGTTGCTCCCATCTGTCCA+AGG | - | chr5_2:72596423-72596442 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 72594453 | 72598594 | 72594453 | ID=Msa0786970;Name=Msa0786970 |
| chr5_2 | mRNA | 72594453 | 72598594 | 72594453 | ID=Msa0786970-mRNA-1;Parent=Msa0786970;Name=Msa0786970-mRNA-1;_AED=0.05;_eAED=0.05;_QI=231|1|1|1|1|1|5|189|388 |
| chr5_2 | exon | 72594453 | 72595020 | 72594453 | ID=Msa0786970-mRNA-1:exon:22056;Parent=Msa0786970-mRNA-1 |
| chr5_2 | exon | 72596168 | 72596218 | 72596168 | ID=Msa0786970-mRNA-1:exon:22057;Parent=Msa0786970-mRNA-1 |
| chr5_2 | exon | 72596357 | 72596529 | 72596357 | ID=Msa0786970-mRNA-1:exon:22058;Parent=Msa0786970-mRNA-1 |
| chr5_2 | exon | 72597104 | 72597339 | 72597104 | ID=Msa0786970-mRNA-1:exon:22059;Parent=Msa0786970-mRNA-1 |
| chr5_2 | exon | 72598036 | 72598594 | 72598036 | ID=Msa0786970-mRNA-1:exon:22060;Parent=Msa0786970-mRNA-1 |
| chr5_2 | five_prime_UTR | 72594453 | 72594683 | 72594453 | ID=Msa0786970-mRNA-1:five_prime_utr;Parent=Msa0786970-mRNA-1 |
| chr5_2 | CDS | 72594684 | 72595020 | 72594684 | ID=Msa0786970-mRNA-1:cds;Parent=Msa0786970-mRNA-1 |
| chr5_2 | CDS | 72596168 | 72596218 | 72596168 | ID=Msa0786970-mRNA-1:cds;Parent=Msa0786970-mRNA-1 |
| chr5_2 | CDS | 72596357 | 72596529 | 72596357 | ID=Msa0786970-mRNA-1:cds;Parent=Msa0786970-mRNA-1 |
| chr5_2 | CDS | 72597104 | 72597339 | 72597104 | ID=Msa0786970-mRNA-1:cds;Parent=Msa0786970-mRNA-1 |
| chr5_2 | CDS | 72598036 | 72598405 | 72598036 | ID=Msa0786970-mRNA-1:cds;Parent=Msa0786970-mRNA-1 |
| chr5_2 | three_prime_UTR | 72598406 | 72598594 | 72598406 | ID=Msa0786970-mRNA-1:three_prime_utr;Parent=Msa0786970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
