AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0532680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532680 MtrunA17_Chr4g0006131 83.023 483 32 5 17 449 24 506 0.0 792
Msa0532680 MtrunA17_Chr4g0006111 72.803 478 79 5 17 443 47 524 0.0 687
Msa0532680 MtrunA17_Chr4g0033261 60.632 475 126 10 21 443 27 492 0.0 540
Msa0532680 MtrunA17_Chr4g0033231 57.526 485 145 11 11 443 17 492 0.0 525
Msa0532680 MtrunA17_Chr2g0301231 64.810 395 124 4 60 443 1 391 3.10e-177 501
Msa0532680 MtrunA17_Chr2g0329191 53.360 491 141 11 31 444 30 509 7.45e-169 484
Msa0532680 MtrunA17_Chr2g0329201 52.113 497 151 9 25 444 21 507 4.14e-167 479
Msa0532680 MtrunA17_Chr4g0033271 52.869 488 143 9 35 445 35 512 2.21e-164 473
Msa0532680 MtrunA17_Chr4g0033201 49.898 489 158 8 34 445 35 513 3.10e-162 468
Msa0532680 MtrunA17_Chr4g0033191 50.924 487 152 10 34 443 42 518 4.70e-161 465
Msa0532680 MtrunA17_Chr3g0088441 50.685 511 160 11 10 443 18 513 2.11e-160 463
Msa0532680 MtrunA17_Chr4g0033311 50.800 500 154 10 21 443 30 514 7.38e-160 462
Msa0532680 MtrunA17_Chr6g0482131 50.000 490 158 8 35 447 36 515 2.63e-159 460
Msa0532680 MtrunA17_Chr6g0482071 50.299 501 160 10 26 447 26 516 2.27e-158 458
Msa0532680 MtrunA17_Chr4g0033321 51.546 485 148 9 35 442 33 507 6.34e-157 454
Msa0532680 MtrunA17_Chr4g0033401 50.197 508 165 10 12 442 12 508 1.02e-156 454
Msa0532680 MtrunA17_Chr4g0033341 49.509 509 165 12 12 445 53 544 4.42e-154 448
Msa0532680 MtrunA17_Chr4g0033331 49.691 485 157 8 35 442 39 513 2.71e-151 440
Msa0532680 MtrunA17_Chr6g0482081 50.000 490 159 8 35 447 36 516 9.41e-149 433
Msa0532680 MtrunA17_Chr2g0329321 47.984 496 145 11 25 443 28 487 6.88e-144 420
Msa0532680 MtrunA17_Chr4g0010501 45.473 497 178 10 24 443 13 493 1.90e-138 406
Msa0532680 MtrunA17_Chr3g0087261 43.513 501 189 10 20 442 23 507 1.69e-126 376
Msa0532680 MtrunA17_Chr5g0430451 44.423 520 154 11 17 444 22 498 3.53e-124 370
Msa0532680 MtrunA17_Chr3g0087271 42.913 508 199 11 11 442 16 508 1.26e-120 361
Msa0532680 MtrunA17_Chr4g0043091 40.612 490 201 9 32 443 25 502 2.77e-119 357
Msa0532680 MtrunA17_Chr4g0042171 39.078 499 211 10 25 443 14 499 1.65e-110 335
Msa0532680 MtrunA17_Chr4g0074561 41.452 427 201 11 53 442 96 510 1.82e-103 318
Msa0532680 MtrunA17_Chr3g0090111 38.445 476 214 9 34 443 18 480 5.31e-102 313
Msa0532680 MtrunA17_Chr3g0090131 37.815 476 218 10 34 443 20 483 4.26e-99 305
Msa0532680 MtrunA17_Chr4g0074551 39.184 490 213 11 32 446 47 526 9.71e-99 306
Msa0532680 MtrunA17_Chr2g0317841 37.938 485 213 13 34 442 31 503 4.92e-98 303
Msa0532680 MtrunA17_Chr2g0288071 40.888 428 210 10 52 446 127 544 2.05e-97 303
Msa0532680 MtrunA17_Chr2g0288021 39.352 432 216 11 53 449 95 515 2.74e-96 299
Msa0532680 MtrunA17_Chr6g0482941 37.725 501 216 14 24 446 32 514 4.83e-96 298
Msa0532680 MtrunA17_Chr2g0317821 37.320 485 216 13 34 442 31 503 1.70e-95 297
Msa0532680 MtrunA17_Chr6g0482951 36.145 498 228 12 24 446 32 514 8.27e-93 290
Msa0532680 MtrunA17_Chr7g0234111 37.131 474 219 10 36 445 76 534 3.29e-88 278
Msa0532680 MtrunA17_Chr7g0234131 37.421 473 214 13 36 442 76 532 8.38e-88 277
Msa0532680 MtrunA17_Chr3g0087201 45.190 343 139 9 136 444 17 344 4.51e-87 269
Msa0532680 MtrunA17_Chr7g0234091 36.596 470 221 10 36 442 76 531 1.24e-86 274
Msa0532680 MtrunA17_Chr4g0006971 38.353 425 205 9 53 442 87 489 1.27e-84 269
Msa0532680 MtrunA17_Chr7g0242691 33.932 501 234 12 20 444 16 495 3.84e-84 267
Msa0532680 MtrunA17_Chr7g0242681 38.967 426 202 12 53 443 98 500 1.45e-83 266
Msa0532680 MtrunA17_Chr5g0428831 33.951 486 225 11 36 446 28 492 8.87e-82 261
Msa0532680 MtrunA17_Chr1g0195611 33.539 486 226 11 36 446 28 491 1.09e-80 258
Msa0532680 MtrunA17_Chr7g0230651 36.508 378 185 9 37 381 13 368 5.41e-71 229
Msa0532680 MtrunA17_Chr5g0418871 43.726 263 112 6 52 280 42 302 7.53e-64 209
Msa0532680 MtrunA17_Chr1g0195641 34.821 336 169 8 53 354 85 404 2.60e-54 186
Msa0532680 MtrunA17_Chr7g0236731 41.964 224 102 6 81 276 28 251 8.05e-40 144
Msa0532680 MtrunA17_Chr3g0087191 46.711 152 38 1 27 135 14 165 9.77e-38 135
Msa0532680 MtrunA17_Chr7g0227561 34.071 226 98 5 28 228 79 278 1.66e-35 133
Msa0532680 MtrunA17_Chr4g0068871 28.329 413 227 13 51 447 178 537 1.78e-29 121
Msa0532680 MtrunA17_Chr5g0418861 51.111 90 43 1 354 442 1 90 2.78e-26 101
Msa0532680 MtrunA17_Chr7g0227591 46.429 56 30 0 390 445 13 68 6.56e-12 60.8
Msa0532680 MtrunA17_Chr7g0236741 37.931 58 36 0 390 447 10 67 7.58e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532680 AT5G44640.1 42.043 509 202 10 16 446 12 505 6.03e-130 385
Msa0532680 AT2G44450.1 43.400 500 191 11 24 446 20 504 1.42e-129 384
Msa0532680 AT5G42260.1 42.116 501 197 10 16 438 12 497 5.43e-126 375
Msa0532680 AT3G60130.2 45.517 435 186 10 45 443 30 449 8.16e-124 368
Msa0532680 AT3G60130.1 44.176 455 194 11 31 443 65 501 6.05e-123 367
Msa0532680 AT2G44480.1 41.837 490 199 9 32 445 32 511 1.12e-119 359
Msa0532680 AT2G44480.3 41.837 490 199 9 32 445 63 542 2.61e-119 359
Msa0532680 AT3G60130.3 44.470 434 181 9 45 443 30 438 2.82e-119 356
Msa0532680 AT3G60120.1 40.954 503 195 14 27 444 6 491 3.17e-118 356
Msa0532680 AT1G26560.1 41.684 487 195 11 34 442 31 506 1.34e-117 353
Msa0532680 AT2G44480.2 44.869 419 188 8 60 445 1 409 4.86e-117 349
Msa0532680 AT2G25630.1 40.323 496 188 10 24 442 19 483 1.96e-116 350
Msa0532680 AT5G24550.1 42.340 470 222 10 14 445 54 512 8.38e-116 350
Msa0532680 AT5G54570.1 40.202 495 202 11 29 442 24 505 2.12e-115 349
Msa0532680 AT2G44490.1 38.980 490 210 10 37 446 16 496 1.25e-114 348
Msa0532680 AT3G60140.1 40.891 494 199 12 31 443 22 503 1.41e-113 345
Msa0532680 AT1G51470.1 40.456 482 204 10 31 442 41 509 6.96e-112 339
Msa0532680 AT5G54570.2 43.705 421 186 10 60 442 1 408 2.01e-111 335
Msa0532680 AT1G47600.1 40.456 482 204 11 31 442 41 509 2.93e-111 337
Msa0532680 AT3G03640.1 43.590 429 196 10 52 443 94 513 7.17e-110 335
Msa0532680 AT1G47600.2 40.456 482 203 12 31 442 41 508 7.56e-110 334
Msa0532680 AT5G24540.1 40.574 488 206 11 35 445 32 512 3.05e-108 330
Msa0532680 AT5G36890.2 42.548 416 203 8 53 443 76 480 1.16e-106 325
Msa0532680 AT5G36890.1 42.548 416 203 8 53 443 76 480 1.59e-106 325
Msa0532680 AT3G18080.1 39.264 489 202 12 35 445 39 510 5.19e-103 316
Msa0532680 AT2G44460.1 39.718 496 213 10 25 443 19 505 4.30e-102 316
Msa0532680 AT3G09260.1 37.910 488 217 9 32 442 32 510 1.71e-101 313
Msa0532680 AT5G25980.2 42.588 425 200 13 53 443 109 523 1.91e-101 313
Msa0532680 AT2G32860.2 36.310 504 231 11 25 448 84 577 2.81e-101 315
Msa0532680 AT1G75940.1 36.779 503 228 11 24 443 23 518 3.78e-101 312
Msa0532680 AT2G32860.1 35.756 509 226 13 25 448 84 576 6.66e-101 314
Msa0532680 AT2G44470.3 37.000 500 224 11 23 442 17 505 7.61e-101 313
Msa0532680 AT5G26000.1 41.704 446 207 13 40 442 76 511 1.97e-100 310
Msa0532680 AT1G66270.1 38.618 492 203 12 34 442 35 510 8.39e-100 308
Msa0532680 AT1G66280.1 38.557 485 213 10 34 442 35 510 1.88e-99 308
Msa0532680 AT2G44450.2 45.380 368 152 10 113 446 1 353 3.35e-99 301
Msa0532680 AT3G18070.3 38.980 490 196 14 35 446 30 494 6.03e-99 305
Msa0532680 AT3G18070.1 39.184 490 201 14 35 446 30 500 8.97e-99 305
Msa0532680 AT1G66270.2 38.415 492 202 13 34 442 35 508 1.67e-97 302
Msa0532680 AT5G28510.1 36.842 494 219 11 32 442 36 519 8.31e-97 301
Msa0532680 AT1G52400.3 36.327 501 226 13 23 443 29 516 1.86e-96 300
Msa0532680 AT1G52400.1 36.327 501 226 13 23 443 29 516 1.86e-96 300
Msa0532680 AT3G21370.1 36.864 491 217 12 35 443 33 512 6.31e-95 296
Msa0532680 AT1G61820.1 38.642 427 218 10 53 445 91 507 7.21e-93 290
Msa0532680 AT4G21760.2 39.302 430 213 12 52 448 113 527 1.45e-92 290
Msa0532680 AT4G21760.1 38.695 429 207 12 52 448 113 517 2.16e-89 282
Msa0532680 AT5G54570.3 37.188 441 184 10 29 389 24 451 2.52e-89 279
Msa0532680 AT4G27830.1 35.853 463 240 12 14 442 45 484 4.94e-87 275
Msa0532680 AT1G02850.2 35.524 487 216 10 32 443 23 486 1.48e-86 273
Msa0532680 AT1G61810.1 35.041 488 230 10 35 445 33 510 1.84e-86 274
Msa0532680 AT3G62750.1 33.817 482 234 12 24 442 14 473 4.91e-84 267
Msa0532680 AT1G61810.5 37.381 420 219 9 60 445 1 410 6.53e-84 264
Msa0532680 AT3G62750.2 33.817 482 234 12 24 442 40 499 2.46e-83 266
Msa0532680 AT1G02850.1 35.000 480 201 9 32 443 23 459 3.82e-83 264
Msa0532680 AT1G02850.5 33.922 510 216 11 32 443 23 509 3.92e-83 265
Msa0532680 AT5G25980.3 41.192 369 175 11 53 389 109 467 3.36e-82 261
Msa0532680 AT5G25980.1 41.192 369 175 11 53 389 109 467 3.36e-82 261
Msa0532680 AT4G27830.2 37.170 417 207 11 60 442 1 396 1.82e-81 258
Msa0532680 AT1G02850.4 33.855 511 216 12 32 443 23 510 1.95e-81 261
Msa0532680 AT4G27820.1 35.421 463 240 13 14 442 45 482 4.80e-81 259
Msa0532680 AT5G24540.2 37.674 430 185 10 35 388 32 454 8.18e-81 257
Msa0532680 AT1G61810.3 35.054 465 216 9 35 422 33 488 1.45e-80 259
Msa0532680 AT3G60140.2 38.903 401 157 10 31 353 22 412 9.42e-80 254
Msa0532680 AT5G26000.2 39.130 391 187 9 40 389 76 456 1.09e-79 254
Msa0532680 AT3G62750.6 35.294 408 219 10 60 442 1 388 2.92e-78 249
Msa0532680 AT3G62750.5 35.294 408 219 10 60 442 1 388 2.92e-78 249
Msa0532680 AT4G22100.1 34.511 481 226 12 36 445 23 485 1.95e-77 250
Msa0532680 AT2G44470.1 34.831 445 200 10 23 388 17 450 2.83e-77 248
Msa0532680 AT5G48375.1 40.374 374 158 12 51 407 86 411 1.03e-76 246
Msa0532680 AT4G27820.2 36.691 417 210 12 60 442 1 397 1.94e-76 245
Msa0532680 AT4G27820.3 36.691 417 210 12 60 442 1 397 1.94e-76 245
Msa0532680 AT3G62740.1 34.426 427 223 11 49 442 76 478 4.45e-76 246
Msa0532680 AT1G61820.3 37.433 374 191 9 106 445 4 368 3.34e-75 240
Msa0532680 AT2G44460.2 41.576 368 171 9 111 443 1 359 4.86e-75 241
Msa0532680 AT1G60090.2 33.125 480 230 12 35 443 24 483 2.34e-73 239
Msa0532680 AT1G45191.4 32.985 479 226 10 36 443 30 484 4.49e-71 233
Msa0532680 AT1G52400.2 34.157 445 201 12 23 388 29 460 7.15e-71 231
Msa0532680 AT1G60090.1 32.510 486 232 13 35 443 24 490 8.70e-71 233
Msa0532680 AT1G45191.6 32.777 479 238 10 36 443 30 495 2.46e-69 229
Msa0532680 AT1G45191.2 32.777 479 233 11 36 443 30 490 3.59e-69 228
Msa0532680 AT3G18070.2 36.384 448 195 16 35 446 30 423 3.92e-69 226
Msa0532680 AT1G45191.1 33.409 440 247 9 37 443 81 507 1.85e-67 224
Msa0532680 AT3G62750.4 32.093 430 208 11 24 391 40 447 3.81e-66 219
Msa0532680 AT2G44470.2 37.048 332 133 7 23 278 17 348 1.51e-64 213
Msa0532680 AT2G44480.4 42.193 301 99 7 32 257 63 363 4.07e-64 212
Msa0532680 AT2G44480.5 40.426 282 149 6 173 445 34 305 2.09e-62 205
Msa0532680 AT3G62740.2 33.962 371 189 10 43 381 70 416 4.86e-61 205
Msa0532680 AT3G18070.7 41.608 286 140 9 173 446 41 311 1.15e-59 198
Msa0532680 AT1G02850.3 32.697 419 168 9 32 353 23 424 1.17e-58 199
Msa0532680 AT3G62750.7 35.826 321 140 8 24 282 14 330 1.27e-58 197
Msa0532680 AT3G62750.8 35.826 321 140 8 24 282 14 330 1.27e-58 197
Msa0532680 AT3G62750.3 35.826 321 140 8 24 282 40 356 1.01e-57 196
Msa0532680 AT1G61810.4 31.818 396 184 9 35 353 33 419 5.48e-55 189
Msa0532680 AT3G18070.4 37.107 318 122 8 35 278 30 343 1.48e-54 186
Msa0532680 AT1G51490.1 37.456 283 150 4 53 309 78 359 1.65e-54 187
Msa0532680 AT1G60270.1 35.385 325 136 8 35 288 24 345 2.35e-50 175
Msa0532680 AT1G45191.5 33.866 313 135 6 36 278 30 340 2.53e-47 168
Msa0532680 AT1G45191.3 33.866 313 135 6 36 278 30 340 3.15e-47 168
Msa0532680 AT1G60270.2 37.367 281 133 9 60 307 1 271 6.51e-46 161
Msa0532680 AT1G61810.2 33.080 263 104 4 35 226 33 294 6.70e-38 140
Msa0532680 AT3G18070.5 32.773 357 153 14 35 355 30 335 1.56e-36 137
Msa0532680 AT3G06510.2 25.858 437 241 12 51 447 155 548 3.74e-31 127
Msa0532680 AT5G16580.1 31.849 292 150 11 138 399 27 299 1.61e-29 117
Msa0532680 AT3G06510.1 25.935 428 218 13 51 447 155 514 4.91e-29 120
Msa0532680 AT3G18070.6 37.436 195 98 7 173 355 41 223 2.42e-27 109

Find 107 sgRNAs with CRISPR-Local

Find 612 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAACATAATAGAATTAT+TGG 0.142938 4_1:-7129804 Msa0532680:CDS
GATATATGCTTCAAGGAATT+TGG 0.182257 4_1:-7131339 Msa0532680:CDS
CGAGATACAAGGGGTGATTT+TGG 0.197537 4_1:+7129565 None:intergenic
GAGCAATCTAAGAGTCTTAT+TGG 0.231240 4_1:-7130894 Msa0532680:CDS
ACTGTTAATGTGACTTTAAC+AGG 0.248704 4_1:-7130753 Msa0532680:intron
GGGGAAGATCCCAATGAAAA+AGG 0.264707 4_1:+7131899 None:intergenic
ACGATTATCATAACAGAAAA+TGG 0.280720 4_1:-7130427 Msa0532680:intron
CAAAGCTCACACAGTATTAT+TGG 0.283801 4_1:+7129759 None:intergenic
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4_1:-7129940 Msa0532680:CDS
TGTTTGTCCAAAGGGGATTC+AGG 0.305206 4_1:-7130488 Msa0532680:CDS
TACAAAACGTACCTGGTAAT+TGG 0.306037 4_1:+7134196 None:intergenic
AGCTCTCTGCCCGGTGGTTT+AGG 0.309537 4_1:-7129833 Msa0532680:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4_1:-7129900 Msa0532680:CDS
CAATAAAGAGGGGTGATTTA+AGG 0.315275 4_1:-7129600 Msa0532680:three_prime_UTR
TGTGGTCTCTTTCTCTTTGA+AGG 0.337983 4_1:+7136218 None:intergenic
ACCACATATCAGGCTCAAAA+TGG 0.345183 4_1:-7131192 Msa0532680:intron
TTCTTGTTTCGCTCAGGTCT+TGG 0.348865 4_1:-7129413 Msa0532680:three_prime_UTR
TCTAATGGGTCAGTTGAGTA+TGG 0.349718 4_1:+7131132 None:intergenic
CATGAAATCAAGGGCGTCTT+CGG 0.355937 4_1:+7131098 None:intergenic
GCAGTGAACGTTGGTAAATC+TGG 0.366493 4_1:+7130918 None:intergenic
CAATATCCTTGGCCAAGATA+TGG 0.382965 4_1:+7132190 None:intergenic
GATCCAGACTGTATAGGAAT+TGG 0.386737 4_1:+7130810 None:intergenic
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4_1:-7129963 Msa0532680:CDS
CTATTACTTGGCAATATCCT+TGG 0.390771 4_1:+7132179 None:intergenic
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4_1:+7129925 None:intergenic
TGGCTATATGTTTGTCCAAA+GGG 0.410402 4_1:-7130496 Msa0532680:CDS
CATACAGATTCTCCATATCT+TGG 0.418726 4_1:-7132202 Msa0532680:CDS
GTGGTCTCTTTCTCTTTGAA+GGG 0.424614 4_1:+7136219 None:intergenic
TTTATACAGCCGCTAACAAC+AGG 0.426920 4_1:-7130972 Msa0532680:CDS
ATACTCATCTTGTAAGGCCT+GGG 0.427696 4_1:+7131879 None:intergenic
ATCAATGAGCTACTTGCTAA+TGG 0.429019 4_1:-7132015 Msa0532680:intron
CAGGCCTTACAAGATGAGTA+TGG 0.435383 4_1:-7131877 Msa0532680:CDS
GCATAAATAGAGGCAATAAC+AGG 0.437739 4_1:+7134281 None:intergenic
ATTGTATAAAACCACATATC+AGG 0.437772 4_1:-7131202 Msa0532680:CDS
ACATAAGACACCAAGCTTGC+TGG 0.447607 4_1:+7130942 None:intergenic
AACCACCGGGCAGAGAGCTT+AGG 0.450563 4_1:+7129837 None:intergenic
TTGCCTTTCTTGTTTCGCTC+AGG 0.451091 4_1:-7129419 Msa0532680:three_prime_UTR
CATACTCATCTTGTAAGGCC+TGG 0.455210 4_1:+7131878 None:intergenic
CTTCTTCTTCATCAATAAAG+AGG 0.457465 4_1:-7129612 Msa0532680:three_prime_UTR
ATGACAGATAAGAATAAAGA+TGG 0.458312 4_1:-7130620 Msa0532680:intron
CCGCCTGATCCAGACTGTAT+AGG 0.458956 4_1:+7130804 None:intergenic
TAGCAAGTAGCTCATTGATC+AGG 0.461889 4_1:+7132019 None:intergenic
ACACTTTGAATACATCAGAT+TGG 0.462336 4_1:-7131272 Msa0532680:CDS
ACCATCCAAACATGAAATCA+AGG 0.473106 4_1:+7131088 None:intergenic
TTCATTGACTGAATCTGCAT+TGG 0.473903 4_1:+7129360 None:intergenic
CTTCGTGGATATATGCTTCA+AGG 0.473903 4_1:-7131346 Msa0532680:CDS
ACCACCGGGCAGAGAGCTTA+GGG 0.475465 4_1:+7129838 None:intergenic
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4_1:-7130158 Msa0532680:CDS
TTGGAGACAGAGTAAAGCAT+TGG 0.480355 4_1:-7131320 Msa0532680:CDS
AATAAAGATGGGACATACAT+TGG 0.483048 4_1:-7130608 Msa0532680:CDS
ATTCCTATACAGTCTGGATC+AGG 0.483543 4_1:-7130807 Msa0532680:CDS
AGTAGGTCCTGAATCCCCTT+TGG 0.484753 4_1:+7130481 None:intergenic
GCATTGGATTAAACTCTCAC+TGG 0.490284 4_1:-7131161 Msa0532680:CDS
AGCAATCTAAGAGTCTTATT+GGG 0.490733 4_1:-7130893 Msa0532680:CDS
GCCTCCATACTCATCTTGTA+AGG 0.497866 4_1:+7131873 None:intergenic
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4_1:+7129926 None:intergenic
TTCTTCTTCATCAATAAAGA+GGG 0.501801 4_1:-7129611 Msa0532680:three_prime_UTR
TGGAGACAGAGTAAAGCATT+GGG 0.508305 4_1:-7131319 Msa0532680:CDS
TCTGGATCAGGCGGCGCTGA+CGG 0.508743 4_1:-7130795 Msa0532680:CDS
CAGCTGCATGAGCAAGAAGT+TGG 0.509222 4_1:+7131232 None:intergenic
AGGAATTGGTTTCGTTGCAT+TGG 0.510612 4_1:+7130824 None:intergenic
AAACCAATTCCTATACAGTC+TGG 0.511299 4_1:-7130813 Msa0532680:CDS
AAAGAGAAAGAGACCACATT+CGG 0.513482 4_1:-7136213 Msa0532680:CDS
AAAACTGTCAGCATAAATAG+AGG 0.520509 4_1:+7134271 None:intergenic
AGGAAAGTATCCAGCAAGCT+TGG 0.526086 4_1:-7130952 Msa0532680:CDS
GACAACTTTGAATGGAATGA+CGG 0.527539 4_1:-7129918 Msa0532680:CDS
TGGTCTCTTTCTCTTTGAAG+GGG 0.531186 4_1:+7136220 None:intergenic
GGATACTTTCCTGTTGTTAG+CGG 0.535598 4_1:+7130963 None:intergenic
AGACCTGAGCGAAACAAGAA+AGG 0.536233 4_1:+7129416 None:intergenic
TACTGGCTCCTCCAATTACC+AGG 0.536244 4_1:-7134207 Msa0532680:intron
GAAGTTGGTTGTGTGTGGCC+TGG 0.537777 4_1:+7131247 None:intergenic
AATATGTGCAGGCTGCAACT+TGG 0.539391 4_1:-7130516 Msa0532680:intron
CAAGAAACTTCCTAAACCAC+CGG 0.545200 4_1:+7129823 None:intergenic
TTGGCTATATGTTTGTCCAA+AGG 0.547740 4_1:-7130497 Msa0532680:CDS
TTTCCTTTGTGTACAACAGT+AGG 0.554600 4_1:+7130464 None:intergenic
GGTCTCTTTCTCTTTGAAGG+GGG 0.568914 4_1:+7136221 None:intergenic
GTATTCAAAGTGTAAGAGAA+TGG 0.570526 4_1:+7131282 None:intergenic
GATTCTCCATATCTTGGCCA+AGG 0.571513 4_1:-7132196 Msa0532680:CDS
GACACCCTAAGCTCTCTGCC+CGG 0.573913 4_1:-7129842 Msa0532680:CDS
CTTGACGATATTTCCGAATG+TGG 0.577303 4_1:+7136200 None:intergenic
TGGGACATACATTGGAGCAT+GGG 0.581493 4_1:-7130600 Msa0532680:intron
ATGGGACATACATTGGAGCA+TGG 0.582897 4_1:-7130601 Msa0532680:CDS
TGTAAAATATGATTCCTGCT+TGG 0.587277 4_1:+7132046 None:intergenic
TTCGGAAATATCGTCAAGTA+CGG 0.592831 4_1:-7136195 Msa0532680:intron
GTGTGTTTGTCGCATTTGTG+TGG 0.592863 4_1:-7129448 Msa0532680:three_prime_UTR
GAATACATCAGATTGGTACC+AGG 0.597455 4_1:-7131265 Msa0532680:CDS
AAAACGTACCTGGTAATTGG+AGG 0.599628 4_1:+7134199 None:intergenic
GATTGCTCTGCAGTGAACGT+TGG 0.602380 4_1:+7130909 None:intergenic
GGCTATATGTTTGTCCAAAG+GGG 0.602874 4_1:-7130495 Msa0532680:CDS
AGCTCACACAGTATTATTGG+TGG 0.605868 4_1:+7129762 None:intergenic
TGACAGATAAGAATAAAGAT+GGG 0.612129 4_1:-7130619 Msa0532680:intron
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4_1:-7129950 Msa0532680:CDS
AGTGGCGGTGTAAACCAAGC+AGG 0.626808 4_1:-7132060 Msa0532680:CDS
TCTTCTTCATCAATAAAGAG+GGG 0.629116 4_1:-7129610 Msa0532680:three_prime_UTR
AGCAAGAAGTTGGTTGTGTG+TGG 0.636210 4_1:+7131242 None:intergenic
CCATCCAAACATGAAATCAA+GGG 0.640294 4_1:+7131089 None:intergenic
TACTCATCTTGTAAGGCCTG+GGG 0.645812 4_1:+7131880 None:intergenic
TGCATTGGCAGCATACATGC+TGG 0.650774 4_1:+7130839 None:intergenic
CCTATACAGTCTGGATCAGG+CGG 0.652705 4_1:-7130804 Msa0532680:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.653344 4_1:-7132078 Msa0532680:intron
TCCTACACTATCACTCGAAG+AGG 0.658030 4_1:-7130167 Msa0532680:CDS
GGACCTACTGTTGTACACAA+AGG 0.659998 4_1:-7130467 Msa0532680:CDS
AAGAAACTTCCTAAACCACC+GGG 0.661886 4_1:+7129824 None:intergenic
ACCCTAAGCTCTCTGCCCGG+TGG 0.683098 4_1:-7129839 Msa0532680:CDS
GCAGAAGGAAAACTAAGTGG+CGG 0.686824 4_1:-7132075 Msa0532680:intron
GCCTTACAAGATGAGTATGG+AGG 0.687554 4_1:-7131874 Msa0532680:CDS
GCCTCTTCGAGTGATAGTGT+AGG 0.709813 4_1:+7130166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAATAATATAAAAA+TGG + chr4_1:7131661-7131680 None:intergenic 0.0%
!!! TATTTTAAATAAATAAATAA+AGG + chr4_1:7133087-7133106 None:intergenic 0.0%
!! AAAAAAAATTAATTAGTACT+TGG - chr4_1:7129782-7129801 Msa0532680:exon 10.0%
!! AATTACTATTAATCATTAAT+CGG - chr4_1:7130607-7130626 Msa0532680:CDS 10.0%
!! AAAATAGAGATTAAAAATAA+GGG + chr4_1:7130720-7130739 None:intergenic 10.0%
!!! TATTATTTTCCATTATTTTT+AGG - chr4_1:7131494-7131513 Msa0532680:intron 10.0%
!!! ATTATTTTCCATTATTTTTA+GGG - chr4_1:7131495-7131514 Msa0532680:intron 10.0%
!!! TACAATATTTTTTGTAATTA+AGG - chr4_1:7131940-7131959 Msa0532680:intron 10.0%
!!! TTGTATTTTTTTTTAGTATA+TGG + chr4_1:7132632-7132651 None:intergenic 10.0%
!!! TAAAGGTTTAATTATTTTTT+AGG + chr4_1:7133070-7133089 None:intergenic 10.0%
!! AAAAAGCAAAAATATATTTA+AGG + chr4_1:7133391-7133410 None:intergenic 10.0%
!!! TTAAATATATTTTTGCTTTT+TGG - chr4_1:7133390-7133409 Msa0532680:intron 10.0%
!! AAATAAAGAAAACAAATAAT+GGG + chr4_1:7133878-7133897 None:intergenic 10.0%
!! AAAATAAAGAAAACAAATAA+TGG + chr4_1:7133879-7133898 None:intergenic 10.0%
!!! ATTATTTGTTTTCTTTATTT+TGG - chr4_1:7133878-7133897 Msa0532680:intron 10.0%
!!! ATTGAATAAATTTTATTTAG+AGG - chr4_1:7134681-7134700 Msa0532680:intron 10.0%
!!! TTTATTCTTTTATTTATAGT+TGG - chr4_1:7134758-7134777 Msa0532680:intron 10.0%
!! CATTTAAATGAAAAAAAAAT+TGG + chr4_1:7134824-7134843 None:intergenic 10.0%
!!! TAAAAATATTTTATTGTTCT+TGG + chr4_1:7135139-7135158 None:intergenic 10.0%
!!! ATTTCTTTAATGTTTATTTT+AGG - chr4_1:7135189-7135208 Msa0532680:intron 10.0%
!!! TTTCTTTAATGTTTATTTTA+GGG - chr4_1:7135190-7135209 Msa0532680:intron 10.0%
!! ATAGATAAAAAAAAAATTGA+AGG + chr4_1:7136477-7136496 None:intergenic 10.0%
!!! CAATTTTTTTTTTATCTATT+TGG - chr4_1:7136478-7136497 Msa0532680:intron 10.0%
!!! ATATATTTTTTTTACACTAT+CGG + chr4_1:7136770-7136789 None:intergenic 10.0%
!! AAAAAAGATTTCAAATTATA+CGG + chr4_1:7138495-7138514 None:intergenic 10.0%
!! TTCTAATAAATTTAAATCAT+AGG - chr4_1:7139292-7139311 Msa0532680:intron 10.0%
!!! TATAATAGTTAACTTTGTTT+TGG - chr4_1:7129754-7129773 Msa0532680:three_prime_UTR 15.0%
!!! ATTTGTAGTTTTTTTTCTTA+TGG + chr4_1:7130093-7130112 None:intergenic 15.0%
!!! AGTAATACACATTTATTTTT+AGG - chr4_1:7130273-7130292 Msa0532680:intron 15.0%
!!! TTATTTTTAGGAAAATTCTA+TGG - chr4_1:7130285-7130304 Msa0532680:intron 15.0%
!! GAAAATAGAGATTAAAAATA+AGG + chr4_1:7130721-7130740 None:intergenic 15.0%
!! ATATCTATGAAATATAACTA+AGG + chr4_1:7130896-7130915 None:intergenic 15.0%
!!! ATATCAACTCTTTTTAATAT+TGG - chr4_1:7130984-7131003 Msa0532680:intron 15.0%
!! TCATTAATTAACCATTAATT+TGG - chr4_1:7131341-7131360 Msa0532680:CDS 15.0%
!! TAGTTTAAAAACCAAATTAA+TGG + chr4_1:7131355-7131374 None:intergenic 15.0%
!! GCTTAAATATAATTTATTTG+TGG + chr4_1:7131809-7131828 None:intergenic 15.0%
!! AAATACTTATCATTTGATTA+TGG - chr4_1:7131841-7131860 Msa0532680:intron 15.0%
!!! CAAACTTTTTTTTTTGTTTA+GGG + chr4_1:7131903-7131922 None:intergenic 15.0%
!!! ACAAACTTTTTTTTTTGTTT+AGG + chr4_1:7131904-7131923 None:intergenic 15.0%
!! ACAAAAAATATTGTAGTTTA+GGG + chr4_1:7131935-7131954 None:intergenic 15.0%
!! TACAAAAAATATTGTAGTTT+AGG + chr4_1:7131936-7131955 None:intergenic 15.0%
!! CAAAAAAATATAATAGTTCA+AGG + chr4_1:7132661-7132680 None:intergenic 15.0%
!!! CTTGAACTATTATATTTTTT+TGG - chr4_1:7132659-7132678 Msa0532680:intron 15.0%
!! AAAATTTGGATTTCAAAATA+GGG + chr4_1:7132735-7132754 None:intergenic 15.0%
!! TAAAATTTGGATTTCAAAAT+AGG + chr4_1:7132736-7132755 None:intergenic 15.0%
!! TTGAAAATATATAATACAGT+GGG + chr4_1:7132761-7132780 None:intergenic 15.0%
!! TCCTGAAAAAATATATTATA+GGG + chr4_1:7132792-7132811 None:intergenic 15.0%
!! ATCCTGAAAAAATATATTAT+AGG + chr4_1:7132793-7132812 None:intergenic 15.0%
!!! ATATATTTTTTCAGGATTTT+AGG - chr4_1:7132796-7132815 Msa0532680:intron 15.0%
!!! TATATTTTTTCAGGATTTTA+GGG - chr4_1:7132797-7132816 Msa0532680:intron 15.0%
!!! CAAGAAAAAAAATTAGTTTA+AGG - chr4_1:7132984-7133003 Msa0532680:intron 15.0%
!!! TTTTAGGTTTCTAAATTATT+TGG + chr4_1:7133054-7133073 None:intergenic 15.0%
!! AAAATAAAGAAAACAAAGAA+AGG - chr4_1:7133761-7133780 Msa0532680:intron 15.0%
!! TCAAAACTAATATATTTGTT+GGG + chr4_1:7134104-7134123 None:intergenic 15.0%
!! TTCAAAACTAATATATTTGT+TGG + chr4_1:7134105-7134124 None:intergenic 15.0%
!!! TATATTAGTTTTGAATTAGT+TGG - chr4_1:7134110-7134129 Msa0532680:intron 15.0%
!! CAATCAATTATAGATAAAAT+TGG - chr4_1:7134419-7134438 Msa0532680:intron 15.0%
!!! CAATAACTATTTTAAAAAGT+TGG + chr4_1:7134465-7134484 None:intergenic 15.0%
!!! TAAGGATAAAATACTTTTTT+AGG + chr4_1:7134712-7134731 None:intergenic 15.0%
!! AAAAAAAAAAAATACCTTGA+AGG - chr4_1:7134945-7134964 Msa0532680:intron 15.0%
!!! TTCTTTAATGTTTATTTTAG+GGG - chr4_1:7135191-7135210 Msa0532680:intron 15.0%
!!! GGAATTAAACATAATTTTTT+TGG + chr4_1:7135407-7135426 None:intergenic 15.0%
!!! TTTAATACATGTTTTTTCTT+TGG + chr4_1:7135447-7135466 None:intergenic 15.0%
!! TTAAATAAAGAGAAATTCTT+AGG - chr4_1:7135462-7135481 Msa0532680:intron 15.0%
!! TATTACTTTCTATAAATTTC+TGG + chr4_1:7135936-7135955 None:intergenic 15.0%
!!! TATTTTCTTATATTTTAGAC+TGG + chr4_1:7135965-7135984 None:intergenic 15.0%
!! TATTATTGAATCTTAAGAAT+TGG - chr4_1:7136057-7136076 Msa0532680:intron 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG - chr4_1:7137134-7137153 Msa0532680:intron 15.0%
!!! ATTAAACATTTTCTATTACT+TGG + chr4_1:7137336-7137355 None:intergenic 15.0%
!! GTAATAGAAAATGTTTAATT+TGG - chr4_1:7137337-7137356 Msa0532680:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG + chr4_1:7137525-7137544 None:intergenic 15.0%
!! TTCATAATAATACAAATTGA+TGG - chr4_1:7137545-7137564 Msa0532680:intron 15.0%
!! ATTCAAGAAATAATAAATTG+AGG - chr4_1:7138056-7138075 Msa0532680:intron 15.0%
!!! ATTTTTACATTCTAACTTTG+AGG - chr4_1:7129609-7129628 Msa0532680:three_prime_UTR 20.0%
!! CAAATATTATACCACTAAAT+CGG - chr4_1:7129919-7129938 Msa0532680:CDS 20.0%
!! AGATTTATAGATTAATGAGT+TGG + chr4_1:7130001-7130020 None:intergenic 20.0%
!!! ATTGAAGTTTTGTTAATTTC+AGG - chr4_1:7130141-7130160 Msa0532680:CDS 20.0%
!! ACAAAACTTACAATTTCATA+GGG - chr4_1:7130174-7130193 Msa0532680:CDS 20.0%
!!! TACATGTATTATTTTATCGT+TGG + chr4_1:7130557-7130576 None:intergenic 20.0%
!!! ATATCGACTAATATTTACAA+AGG + chr4_1:7130968-7130987 None:intergenic 20.0%
!! AATGTTATTATGTATAGAGT+TGG - chr4_1:7131049-7131068 Msa0532680:intron 20.0%
!!! TGGAATATTTCTCTATTTTA+TGG - chr4_1:7131182-7131201 Msa0532680:intron 20.0%
!!! ATCTTTGGATCATTTTTAAA+AGG + chr4_1:7131629-7131648 None:intergenic 20.0%
!!! TTTTAAAAATGATCCAAAGA+TGG - chr4_1:7131628-7131647 Msa0532680:intron 20.0%
!!! AAAACAAACGCTAATTTTAA+GGG + chr4_1:7131737-7131756 None:intergenic 20.0%
!!! TAAAACAAACGCTAATTTTA+AGG + chr4_1:7131738-7131757 None:intergenic 20.0%
!! ATTATGGAGAATTAATTGTA+TGG - chr4_1:7131777-7131796 Msa0532680:intron 20.0%
!! TTATGGAGAATTAATTGTAT+GGG - chr4_1:7131778-7131797 Msa0532680:intron 20.0%
!! TTTAGGGATAAAATATTTCA+AGG + chr4_1:7131887-7131906 None:intergenic 20.0%
!! ATGATAGAGATATATGATAA+AGG - chr4_1:7132048-7132067 Msa0532680:CDS 20.0%
!! TGATAGAGATATATGATAAA+GGG - chr4_1:7132049-7132068 Msa0532680:CDS 20.0%
!! ATATAGAAAAAAGATGTACT+AGG - chr4_1:7132087-7132106 Msa0532680:intron 20.0%
!! TATAGAAAAAAGATGTACTA+GGG - chr4_1:7132088-7132107 Msa0532680:intron 20.0%
!! ATTATCTAATTATCTGCAAA+AGG + chr4_1:7132493-7132512 None:intergenic 20.0%
!! ATATATATATATCGCATTGT+AGG - chr4_1:7132574-7132593 Msa0532680:intron 20.0%
!! TGAAAATATATAATACAGTG+GGG + chr4_1:7132760-7132779 None:intergenic 20.0%
!! CTTGAAAATATATAATACAG+TGG + chr4_1:7132762-7132781 None:intergenic 20.0%
!! CTGAAAAAATATATTATAGG+GGG + chr4_1:7132790-7132809 None:intergenic 20.0%
!! CCTGAAAAAATATATTATAG+GGG + chr4_1:7132791-7132810 None:intergenic 20.0%
!!! ATATTTTTTCAGGATTTTAG+GGG - chr4_1:7132798-7132817 Msa0532680:intron 20.0%
!!! CTCACTGTTTTATAATTTTT+AGG + chr4_1:7132833-7132852 None:intergenic 20.0%
!! CTAAAAATTATAAAACAGTG+AGG - chr4_1:7132831-7132850 Msa0532680:intron 20.0%
!! AAAATAACGTTATAAAGTTG+AGG + chr4_1:7133201-7133220 None:intergenic 20.0%
!!! TTAGGCATTTTAAATAGTTA+TGG + chr4_1:7133238-7133257 None:intergenic 20.0%
!!! ACTATTTAAAATGCCTAATT+TGG - chr4_1:7133240-7133259 Msa0532680:intron 20.0%
!! AGTTTCTATATTGTAACATT+AGG - chr4_1:7133523-7133542 Msa0532680:intron 20.0%
!!! TATTGTTTCATTCTTGTTTT+CGG - chr4_1:7133629-7133648 Msa0532680:intron 20.0%
!!! TTATTTTTGCCTTTTTAAGA+GGG + chr4_1:7133748-7133767 None:intergenic 20.0%
!!! TTTATTTTTGCCTTTTTAAG+AGG + chr4_1:7133749-7133768 None:intergenic 20.0%
!!! CAAAACTAATATATTTGTTG+GGG + chr4_1:7134103-7134122 None:intergenic 20.0%
!! AATAATCTATCTGTTTACAT+TGG - chr4_1:7134368-7134387 Msa0532680:intron 20.0%
!!! TAAAAAAGTGTTTTTAGTCT+TGG + chr4_1:7134634-7134653 None:intergenic 20.0%
!! TTATTTAAGAAATGGAAACT+GGG + chr4_1:7135796-7135815 None:intergenic 20.0%
!! TTTATTTAAGAAATGGAAAC+TGG + chr4_1:7135797-7135816 None:intergenic 20.0%
!!! AATATGTGTCATGTTTTAAT+TGG - chr4_1:7135841-7135860 Msa0532680:intron 20.0%
!! GATGTATCTGATTTATATTA+TGG - chr4_1:7136012-7136031 Msa0532680:intron 20.0%
!!! TAGTTTTATTGATACTATCT+AGG - chr4_1:7136260-7136279 Msa0532680:intron 20.0%
!! AAAAAAAAATTGAAGGTCTT+GGG + chr4_1:7136470-7136489 None:intergenic 20.0%
!! AAAAAAAAAATTGAAGGTCT+TGG + chr4_1:7136471-7136490 None:intergenic 20.0%
!! ATATAAATCATCTGAAAGTT+TGG + chr4_1:7136579-7136598 None:intergenic 20.0%
!!! ATCATATTTTTCTTCTAATG+TGG - chr4_1:7136946-7136965 Msa0532680:intron 20.0%
!! GAAATTATATATCACATTAG+AGG + chr4_1:7137056-7137075 None:intergenic 20.0%
!!! AACCATTTTTACATCTTAAT+AGG - chr4_1:7137239-7137258 Msa0532680:intron 20.0%
!! TTCCTATTAAGATGTAAAAA+TGG + chr4_1:7137244-7137263 None:intergenic 20.0%
!!! AATCTTTTTTATCTGTTTAC+AGG - chr4_1:7138505-7138524 Msa0532680:intron 20.0%
!! AAAACAATTTATGTCAAACA+AGG + chr4_1:7138848-7138867 None:intergenic 20.0%
!! TTCTGATTTAAGTAAATAGA+GGG + chr4_1:7139432-7139451 None:intergenic 20.0%
!! ATTCTGATTTAAGTAAATAG+AGG + chr4_1:7139433-7139452 None:intergenic 20.0%
!!! TTGACTATATTGTTGTTTTT+TGG - chr4_1:7139502-7139521 Msa0532680:intron 20.0%
!! CTTGAACATAATAGAATTAT+TGG - chr4_1:7139696-7139715 Msa0532680:intron 20.0%
! AAAACTGTACATATTGCATA+TGG + chr4_1:7129447-7129466 None:intergenic 25.0%
! TTTAGTGGTATAATATTTGG+TGG + chr4_1:7129918-7129937 None:intergenic 25.0%
! CGATTTAGTGGTATAATATT+TGG + chr4_1:7129921-7129940 None:intergenic 25.0%
!! TAATGAGTTGGATCTAAATA+TGG + chr4_1:7129989-7130008 None:intergenic 25.0%
!! CTTTCCTAATAGTTTTTCTT+AGG - chr4_1:7130019-7130038 Msa0532680:intron 25.0%
! TAAGCCTAAGAAAAACTATT+AGG + chr4_1:7130026-7130045 None:intergenic 25.0%
! GACAAAACTTACAATTTCAT+AGG - chr4_1:7130173-7130192 Msa0532680:CDS 25.0%
! GAGTTTGTAAATGAGTAAAT+AGG + chr4_1:7130206-7130225 None:intergenic 25.0%
! TCTTAAGTGTTACACTTTAT+GGG + chr4_1:7130492-7130511 None:intergenic 25.0%
! ATATAGGAGAGGAAATAATA+TGG + chr4_1:7130828-7130847 None:intergenic 25.0%
! TATATTTCATAGATATCCCA+CGG - chr4_1:7130900-7130919 Msa0532680:CDS 25.0%
!! TTTGTACAATCGATTGTTTT+AGG - chr4_1:7131223-7131242 Msa0532680:CDS 25.0%
! CATTAAAGATGTGTTTAACA+TGG - chr4_1:7131602-7131621 Msa0532680:intron 25.0%
!! AAACAAACGCTAATTTTAAG+GGG + chr4_1:7131736-7131755 None:intergenic 25.0%
!! TATTTTGTCTTACTCTGATA+TGG + chr4_1:7132029-7132048 None:intergenic 25.0%
! AGAAGAGAGAATATATGAAA+GGG + chr4_1:7132403-7132422 None:intergenic 25.0%
! TAGAAGAGAGAATATATGAA+AGG + chr4_1:7132404-7132423 None:intergenic 25.0%
! AAAAATCCTCAAGTAGTTTA+AGG + chr4_1:7132601-7132620 None:intergenic 25.0%
!! CTACTTGAGGATTTTTAAAT+AGG - chr4_1:7132605-7132624 Msa0532680:intron 25.0%
!!! CCCCTATAATATATTTTTTC+AGG - chr4_1:7132788-7132807 Msa0532680:intron 25.0%
!!! TAACTCGCTATTTTGTAATT+CGG + chr4_1:7132865-7132884 None:intergenic 25.0%
!! AACATCACATGATTTTATTG+AGG + chr4_1:7133159-7133178 None:intergenic 25.0%
!!! ATTGTTTCATTCTTGTTTTC+GGG - chr4_1:7133630-7133649 Msa0532680:intron 25.0%
! TTATTAGAACCCTCTTAAAA+AGG - chr4_1:7133736-7133755 Msa0532680:intron 25.0%
! ATAAAGAAAACAAAGAAAGG+TGG - chr4_1:7133764-7133783 Msa0532680:intron 25.0%
!!! AACAAGTTGATAATCCAAAT+CGG + chr4_1:7133834-7133853 None:intergenic 25.0%
!!! TTTATTTTGGCCTTTTTAAG+AGG - chr4_1:7133891-7133910 Msa0532680:intron 25.0%
!!! TTATTTTGGCCTTTTTAAGA+GGG - chr4_1:7133892-7133911 Msa0532680:intron 25.0%
! TAGATTTAGTTGTAATTGTC+TGG - chr4_1:7134243-7134262 Msa0532680:CDS 25.0%
! TATCCTTAAGTTTACTATGT+TGG - chr4_1:7134724-7134743 Msa0532680:intron 25.0%
! AAACCAACATAGTAAACTTA+AGG + chr4_1:7134730-7134749 None:intergenic 25.0%
! AAATAGAACATTGGAAGAAA+TGG + chr4_1:7134855-7134874 None:intergenic 25.0%
! CGAAAGAAAAAATAGAACAT+TGG + chr4_1:7134864-7134883 None:intergenic 25.0%
! AATTTGAAAATGAACCTTCA+AGG + chr4_1:7134962-7134981 None:intergenic 25.0%
! ATCTTAGTAATAAGTGATCA+TGG + chr4_1:7134990-7135009 None:intergenic 25.0%
!!! TTTAATGTTTATTTTAGGGG+CGG - chr4_1:7135194-7135213 Msa0532680:intron 25.0%
!!! TATGCTTTTGCTTTTTGTAA+CGG - chr4_1:7135374-7135393 Msa0532680:intron 25.0%
! AATTCCTAATGCTATAAGAT+TGG - chr4_1:7135421-7135440 Msa0532680:intron 25.0%
!! AAACTTTTCAGTTTTTGCTT+TGG - chr4_1:7135546-7135565 Msa0532680:intron 25.0%
!! AACTTTTCAGTTTTTGCTTT+GGG - chr4_1:7135547-7135566 Msa0532680:intron 25.0%
! TATTGAATCTTAAGAATTGG+AGG - chr4_1:7136060-7136079 Msa0532680:intron 25.0%
! TGTAGACTGATTATAATTGA+GGG + chr4_1:7136527-7136546 None:intergenic 25.0%
! ATGTAGACTGATTATAATTG+AGG + chr4_1:7136528-7136547 None:intergenic 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG + chr4_1:7136854-7136873 None:intergenic 25.0%
!! TTTTCTTCTAATGTGGTAAT+TGG - chr4_1:7136953-7136972 Msa0532680:intron 25.0%
!!! TTAGAGTTTGTTAATGCATA+TGG + chr4_1:7137398-7137417 None:intergenic 25.0%
!! AGAGAAAGATTAGAATGTTT+TGG - chr4_1:7137717-7137736 Msa0532680:intron 25.0%
! TAACTAACTAGTTAGTTAGT+TGG + chr4_1:7137950-7137969 None:intergenic 25.0%
! ATTCTAATGTTAGTTAGTTG+TGG + chr4_1:7138010-7138029 None:intergenic 25.0%
!! TATATGCAGAGATGATTTTA+AGG - chr4_1:7138130-7138149 Msa0532680:intron 25.0%
! ATTGTATAAAACCACATATC+AGG - chr4_1:7138298-7138317 Msa0532680:intron 25.0%
!! ATTGGGTCATATGATTTTAT+TGG - chr4_1:7138624-7138643 Msa0532680:intron 25.0%
!! GTTTGACATAAATTGTTTTC+TGG - chr4_1:7138849-7138868 Msa0532680:intron 25.0%
! ATGACAGATAAGAATAAAGA+TGG - chr4_1:7138880-7138899 Msa0532680:intron 25.0%
! TGACAGATAAGAATAAAGAT+GGG - chr4_1:7138881-7138900 Msa0532680:intron 25.0%
!! TTTTCTGTTATGATAATCGT+AGG + chr4_1:7139073-7139092 None:intergenic 25.0%
! ACGATTATCATAACAGAAAA+TGG - chr4_1:7139073-7139092 Msa0532680:intron 25.0%
! GTTTATTAGACACTGAAAAA+AGG + chr4_1:7139259-7139278 None:intergenic 25.0%
!! ATTATCTTTTATCTGCAATG+AGG - chr4_1:7139401-7139420 Msa0532680:intron 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG - chr4_1:7139517-7139536 Msa0532680:intron 25.0%
! TTCTTCTTCATCAATAAAGA+GGG - chr4_1:7139889-7139908 Msa0532680:intron 25.0%
AACATGTAAAGCATGTTAGT+TGG + chr4_1:7129395-7129414 None:intergenic 30.0%
! ACATGCATGAAATGACATTT+TGG + chr4_1:7129423-7129442 None:intergenic 30.0%
ATGAACAATGTTAAGCTTCA+CGG + chr4_1:7129482-7129501 None:intergenic 30.0%
ATAGCACAAAATTCTGAATC+AGG + chr4_1:7129565-7129584 None:intergenic 30.0%
!! ACTTTGAGGTTAAGTTTGTT+AGG - chr4_1:7129623-7129642 Msa0532680:three_prime_UTR 30.0%
ATCCTTCATGTATTGAACAT+TGG - chr4_1:7129722-7129741 Msa0532680:three_prime_UTR 30.0%
AACCAATGTTCAATACATGA+AGG + chr4_1:7129727-7129746 None:intergenic 30.0%
! ATCTCATTGGCTAATAAATG+AGG - chr4_1:7129823-7129842 Msa0532680:CDS 30.0%
!!! GAAGTTTTGTTAATTTCAGG+AGG - chr4_1:7130144-7130163 Msa0532680:CDS 30.0%
!!! AGTCATGAGAATGACTTTTT+TGG - chr4_1:7130311-7130330 Msa0532680:intron 30.0%
! GATGAATTGATGACACTATA+TGG + chr4_1:7130412-7130431 None:intergenic 30.0%
TGTTACACTTAAAACAAGGT+AGG + chr4_1:7130468-7130487 None:intergenic 30.0%
CTTAAGTGTTACACTTTATG+GGG + chr4_1:7130491-7130510 None:intergenic 30.0%
GTCTTAAGTGTTACACTTTA+TGG + chr4_1:7130493-7130512 None:intergenic 30.0%
TAAAAATAAGGGAGCTTCTA+TGG + chr4_1:7130709-7130728 None:intergenic 30.0%
TTGTTTAAGTGCATGTATTC+GGG + chr4_1:7130854-7130873 None:intergenic 30.0%
CTTGTTTAAGTGCATGTATT+CGG + chr4_1:7130855-7130874 None:intergenic 30.0%
! CTCTATTTTATGGTCTTTCT+CGG - chr4_1:7131192-7131211 Msa0532680:intron 30.0%
!! TTAATTTTAGTGGCATAGGT+AGG + chr4_1:7131267-7131286 None:intergenic 30.0%
!! TTGAGTGTCGTTAATTTTAG+TGG + chr4_1:7131277-7131296 None:intergenic 30.0%
GTCAAGATCAACATGAATTA+AGG + chr4_1:7131307-7131326 None:intergenic 30.0%
AATCCAGTATATTCTCAACA+TGG + chr4_1:7131456-7131475 None:intergenic 30.0%
AAATGGAAAACTTCCATCTT+TGG + chr4_1:7131644-7131663 None:intergenic 30.0%
CTAATATATACCCAAACCAA+CGG + chr4_1:7131709-7131728 None:intergenic 30.0%
! AATTCTCCATAATGTCGTTT+GGG + chr4_1:7131770-7131789 None:intergenic 30.0%
TAATTCTCCATAATGTCGTT+TGG + chr4_1:7131771-7131790 None:intergenic 30.0%
AAAGAGAAAGGATAGAAGAT+AGG + chr4_1:7132221-7132240 None:intergenic 30.0%
AGAAGAAATATGGTAGAAAG+AGG + chr4_1:7132254-7132273 None:intergenic 30.0%
AAGAGAGAATATATGAAAGG+GGG + chr4_1:7132401-7132420 None:intergenic 30.0%
GAAGAGAGAATATATGAAAG+GGG + chr4_1:7132402-7132421 None:intergenic 30.0%
ATTGAGGCACATATATAGAT+GGG + chr4_1:7133143-7133162 None:intergenic 30.0%
TATTGAGGCACATATATAGA+TGG + chr4_1:7133144-7133163 None:intergenic 30.0%
TAGACCAAAATTCTCTTCAA+TGG - chr4_1:7133462-7133481 Msa0532680:intron 30.0%
! AACTCCATTGAAGAGAATTT+TGG + chr4_1:7133469-7133488 None:intergenic 30.0%
! TCTTCAATGGAGTTTTCTAA+GGG - chr4_1:7133475-7133494 Msa0532680:intron 30.0%
CTTCATTGAGAAGAATTTGA+AGG + chr4_1:7133505-7133524 None:intergenic 30.0%
TCATCCATAAACATCAAATG+TGG + chr4_1:7133606-7133625 None:intergenic 30.0%
!!! TTGTTTCATTCTTGTTTTCG+GGG - chr4_1:7133631-7133650 Msa0532680:intron 30.0%
! AAGAGGGTTCTAATAAAAAG+AGG + chr4_1:7133732-7133751 None:intergenic 30.0%
AAACCAAAACCCTCTTAAAA+AGG + chr4_1:7133904-7133923 None:intergenic 30.0%
! TCTATAGTTGTTATTGCGAT+TGG + chr4_1:7134274-7134293 None:intergenic 30.0%
AAAACTGTCAGCATAAATAG+AGG + chr4_1:7135232-7135251 None:intergenic 30.0%
!!! AATTTTGATTTCCTCGTAAG+AGG - chr4_1:7135631-7135650 Msa0532680:intron 30.0%
AGATGTAAGAATGATGTGTT+GGG - chr4_1:7135866-7135885 Msa0532680:intron 30.0%
!! GTGTTGATAATGTAGTATGA+AGG - chr4_1:7136108-7136127 Msa0532680:intron 30.0%
TATATATGCATGTATGTACC+TGG + chr4_1:7136189-7136208 None:intergenic 30.0%
AGAGTTTATAGACAAGTCAT+AGG - chr4_1:7136633-7136652 Msa0532680:intron 30.0%
CTTAACACACACAATTTCTT+AGG - chr4_1:7136690-7136709 Msa0532680:intron 30.0%
TGATCACTATCATCGTTATA+AGG - chr4_1:7137028-7137047 Msa0532680:intron 30.0%
AACTCTAACAAATATGCAGA+AGG - chr4_1:7137410-7137429 Msa0532680:intron 30.0%
TGTAAAATATGATTCCTGCT+TGG + chr4_1:7137457-7137476 None:intergenic 30.0%
ATTGATGGAATTATTGATCC+AGG - chr4_1:7137560-7137579 Msa0532680:intron 30.0%
!! ATATGTGACCCTTTTTCATT+GGG - chr4_1:7137592-7137611 Msa0532680:intron 30.0%
! CTTTAGAGAGAAAACTACAA+AGG - chr4_1:7137791-7137810 Msa0532680:intron 30.0%
AAATCAACTATGTTGTTGGT+TGG + chr4_1:7137985-7138004 None:intergenic 30.0%
GGATAAATCAACTATGTTGT+TGG + chr4_1:7137989-7138008 None:intergenic 30.0%
GATATATGCTTCAAGGAATT+TGG - chr4_1:7138161-7138180 Msa0532680:intron 30.0%
GTATTCAAAGTGTAAGAGAA+TGG + chr4_1:7138221-7138240 None:intergenic 30.0%
ACACTTTGAATACATCAGAT+TGG - chr4_1:7138228-7138247 Msa0532680:intron 30.0%
CAAAATGGTATAATAGGCAT+TGG - chr4_1:7138323-7138342 Msa0532680:intron 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG - chr4_1:7138607-7138626 Msa0532680:intron 30.0%
ACTGTTAATGTGACTTTAAC+AGG - chr4_1:7138747-7138766 Msa0532680:intron 30.0%
AATAAAGATGGGACATACAT+TGG - chr4_1:7138892-7138911 Msa0532680:intron 30.0%
AACAACTAAACAATATGTGC+AGG - chr4_1:7138973-7138992 Msa0532680:intron 30.0%
ATGTAAAAGGATACTTTGCA+TGG - chr4_1:7139550-7139569 Msa0532680:intron 30.0%
CTTCTTCTTCATCAATAAAG+AGG - chr4_1:7139888-7139907 Msa0532680:intron 30.0%
TCTTCTTCATCAATAAAGAG+GGG - chr4_1:7139890-7139909 Msa0532680:intron 30.0%
AAGAGAAAAACGAGATACAA+GGG + chr4_1:7139948-7139967 None:intergenic 30.0%
AAAGAGAAAAACGAGATACA+AGG + chr4_1:7139949-7139968 None:intergenic 30.0%
TTAATTAGTACTTGGACGCA+CGG - chr4_1:7129790-7129809 Msa0532680:exon 35.0%
ACACCTCACTATTTGTATAG+TGG - chr4_1:7130371-7130390 Msa0532680:intron 35.0%
ATGCCACTATACAAATAGTG+AGG + chr4_1:7130377-7130396 None:intergenic 35.0%
TAGTAATGCTTGCAACATCT+TGG + chr4_1:7130583-7130602 None:intergenic 35.0%
!!! AGTCAGGAAACTGACTTTTT+TGG + chr4_1:7130683-7130702 None:intergenic 35.0%
AGAGGAAATAATATGGATGG+AGG + chr4_1:7130821-7130840 None:intergenic 35.0%
AGGAGAGGAAATAATATGGA+TGG + chr4_1:7130824-7130843 None:intergenic 35.0%
TATTCGGGTATATATAGGAG+AGG + chr4_1:7130839-7130858 None:intergenic 35.0%
GCATGTATTCGGGTATATAT+AGG + chr4_1:7130844-7130863 None:intergenic 35.0%
GATCACATTCCTCATTGTTT+GGG + chr4_1:7130930-7130949 None:intergenic 35.0%
TGATCACATTCCTCATTGTT+TGG + chr4_1:7130931-7130950 None:intergenic 35.0%
AAACAATGAGGAATGTGATC+AGG - chr4_1:7130930-7130949 Msa0532680:CDS 35.0%
! TTTTATGGTCTTTCTCGGTT+TGG - chr4_1:7131197-7131216 Msa0532680:CDS 35.0%
TTTATGGTCTTTCTCGGTTT+GGG - chr4_1:7131198-7131217 Msa0532680:CDS 35.0%
!!! AATCGATTGTTTTAGGACGT+GGG - chr4_1:7131230-7131249 Msa0532680:CDS 35.0%
!! GTCGTTAATTTTAGTGGCAT+AGG + chr4_1:7131271-7131290 None:intergenic 35.0%
GAACCATGTTGAGAATATAC+TGG - chr4_1:7131450-7131469 Msa0532680:intron 35.0%
AAAATATGATGATCCACCGT+TGG - chr4_1:7131690-7131709 Msa0532680:intron 35.0%
ACTAGGGATTAAAGAGAGAT+AGG - chr4_1:7132104-7132123 Msa0532680:intron 35.0%
ACACTGAAAGAGATAAAGAG+AGG - chr4_1:7132169-7132188 Msa0532680:intron 35.0%
CACTGAAAGAGATAAAGAGA+GGG - chr4_1:7132170-7132189 Msa0532680:intron 35.0%
ACTGAAAGAGATAAAGAGAG+GGG - chr4_1:7132171-7132190 Msa0532680:intron 35.0%
GGAGAGTTGAAAAAAGAGAA+AGG + chr4_1:7132233-7132252 None:intergenic 35.0%
ACTCAAAGGGAGAAGAAATA+TGG + chr4_1:7132264-7132283 None:intergenic 35.0%
ATATTTCTTCTCCCTTTGAG+TGG - chr4_1:7132263-7132282 Msa0532680:intron 35.0%
TATTTCTTCTCCCTTTGAGT+GGG - chr4_1:7132264-7132283 Msa0532680:intron 35.0%
TTGTTTATCTCCCACTCAAA+GGG + chr4_1:7132277-7132296 None:intergenic 35.0%
AGAGAAGAGATGAAATGAGA+GGG + chr4_1:7132337-7132356 None:intergenic 35.0%
! GAATCAACTTTAGAGAGGAT+GGG + chr4_1:7132368-7132387 None:intergenic 35.0%
! AGAATCAACTTTAGAGAGGA+TGG + chr4_1:7132369-7132388 None:intergenic 35.0%
! AGAGAGAATCAACTTTAGAG+AGG + chr4_1:7132373-7132392 None:intergenic 35.0%
AATACAGTGGGGCTAAAATT+TGG + chr4_1:7132749-7132768 None:intergenic 35.0%
TCTGTTGAAAGCTCCAAATT+AGG + chr4_1:7133256-7133275 None:intergenic 35.0%
AAAGAGAAAGAGACCACATT+CGG - chr4_1:7133287-7133306 Msa0532680:intron 35.0%
TTCGGAAATATCGTCAAGTA+CGG - chr4_1:7133305-7133324 Msa0532680:intron 35.0%
! CTCTTCAATGGAGTTTTCTA+AGG - chr4_1:7133474-7133493 Msa0532680:intron 35.0%
CATTGAGAAGAATTTGAAGG+TGG + chr4_1:7133502-7133521 None:intergenic 35.0%
TCGACCACATTTGATGTTTA+TGG - chr4_1:7133599-7133618 Msa0532680:intron 35.0%
GTGGACAAAGTAACTAATCA+TGG - chr4_1:7133669-7133688 Msa0532680:intron 35.0%
AGGCAATGAATCCTACAAAA+CGG + chr4_1:7133712-7133731 None:intergenic 35.0%
AGTTACAAAAAGCGAACAAG+AGG - chr4_1:7133795-7133814 Msa0532680:intron 35.0%
CGAACAAGAGGATTTCTTTA+GGG - chr4_1:7133807-7133826 Msa0532680:intron 35.0%
CTAAGGACATAATCACTTCA+GGG + chr4_1:7134036-7134055 None:intergenic 35.0%
! TTCGACAACTGAACTTGTTT+GGG + chr4_1:7134181-7134200 None:intergenic 35.0%
! TTTCGACAACTGAACTTGTT+TGG + chr4_1:7134182-7134201 None:intergenic 35.0%
TCTATCTGTTTACATTGGAG+AGG - chr4_1:7134373-7134392 Msa0532680:intron 35.0%
AGCTAGCAAAAAATTTGCAC+AGG + chr4_1:7134786-7134805 None:intergenic 35.0%
GCATAAATAGAGGCAATAAC+AGG + chr4_1:7135222-7135241 None:intergenic 35.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG - chr4_1:7135241-7135260 Msa0532680:intron 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG - chr4_1:7135270-7135289 Msa0532680:intron 35.0%
GTACCAAAAACAAAACCTTC+CGG + chr4_1:7135276-7135295 None:intergenic 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG - chr4_1:7135276-7135295 Msa0532680:intron 35.0%
TACAAAACGTACCTGGTAAT+TGG + chr4_1:7135307-7135326 None:intergenic 35.0%
ACAATGTTACAAAACGTACC+TGG + chr4_1:7135314-7135333 None:intergenic 35.0%
TGTGTATGTTACTATGCATG+TGG - chr4_1:7135331-7135350 Msa0532680:intron 35.0%
TTGGCCAATCTTATAGCATT+AGG + chr4_1:7135428-7135447 None:intergenic 35.0%
AACACTTGGAATAGCAGAAA+GGG - chr4_1:7135664-7135683 Msa0532680:intron 35.0%
! AAGGGCATAAAAGAAGGATT+TGG - chr4_1:7135682-7135701 Msa0532680:intron 35.0%
GTTCATTCTGTCTCTAACAA+TGG + chr4_1:7135744-7135763 None:intergenic 35.0%
CAGATGTAAGAATGATGTGT+TGG - chr4_1:7135865-7135884 Msa0532680:intron 35.0%
ATTGGAGGTTAATCTGTCAA+CGG - chr4_1:7136075-7136094 Msa0532680:intron 35.0%
! CAAAAACCTAGTTAGTGGAT+AGG - chr4_1:7136283-7136302 Msa0532680:intron 35.0%
AAATCATGACCACACCTAAT+TGG - chr4_1:7136321-7136340 Msa0532680:intron 35.0%
CATACAGATTCTCCATATCT+TGG - chr4_1:7137298-7137317 Msa0532680:intron 35.0%
CTATTACTTGGCAATATCCT+TGG + chr4_1:7137324-7137343 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG - chr4_1:7137422-7137441 Msa0532680:intron 35.0%
! ATCAATGAGCTACTTGCTAA+TGG - chr4_1:7137485-7137504 Msa0532680:intron 35.0%
CAATGAAAAAGGGTCACATA+TGG + chr4_1:7137593-7137612 None:intergenic 35.0%
!! CATATGTGACCCTTTTTCAT+TGG - chr4_1:7137591-7137610 Msa0532680:intron 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG + chr4_1:7137943-7137962 None:intergenic 35.0%
!! AGATGATTTTAAGGACTTCG+TGG - chr4_1:7138139-7138158 Msa0532680:intron 35.0%
CAGGCTCAAAATGGTATAAT+AGG - chr4_1:7138317-7138336 Msa0532680:intron 35.0%
CCATCCAAACATGAAATCAA+GGG + chr4_1:7138414-7138433 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG + chr4_1:7138415-7138434 None:intergenic 35.0%
! GAAACGGTCAAAAAGTATAG+TGG + chr4_1:7138440-7138459 None:intergenic 35.0%
ATCCATGGTTGTTGTAGAAA+CGG + chr4_1:7138456-7138475 None:intergenic 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG - chr4_1:7138606-7138625 Msa0532680:intron 35.0%
AAACCAATTCCTATACAGTC+TGG - chr4_1:7138687-7138706 Msa0532680:intron 35.0%
TTCATTAGGAGTGGTAAGAA+AGG + chr4_1:7138781-7138800 None:intergenic 35.0%
TGATGTATGCCATCTTCATT+AGG + chr4_1:7138795-7138814 None:intergenic 35.0%
TTGGCTATATGTTTGTCCAA+AGG - chr4_1:7139003-7139022 Msa0532680:intron 35.0%
TGGCTATATGTTTGTCCAAA+GGG - chr4_1:7139004-7139023 Msa0532680:intron 35.0%
TTTCCTTTGTGTACAACAGT+AGG + chr4_1:7139039-7139058 None:intergenic 35.0%
CCATTCAAAGTTGTCCAAAA+GGG + chr4_1:7139577-7139596 None:intergenic 35.0%
TCCATTCAAAGTTGTCCAAA+AGG + chr4_1:7139578-7139597 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG - chr4_1:7139582-7139601 Msa0532680:intron 35.0%
CAAAGCTCACACAGTATTAT+TGG + chr4_1:7139744-7139763 None:intergenic 35.0%
! AGAAACTAGAGTTTTGCTGA+CGG + chr4_1:7139870-7139889 None:intergenic 35.0%
CAATAAAGAGGGGTGATTTA+AGG - chr4_1:7139900-7139919 Msa0532680:intron 35.0%
AGAGAAAAACGAGATACAAG+GGG + chr4_1:7139947-7139966 None:intergenic 35.0%
! TTCATTGACTGAATCTGCAT+TGG + chr4_1:7140143-7140162 None:intergenic 35.0%
ACAATGTTAAGCTTCACGGA+TGG + chr4_1:7129478-7129497 None:intergenic 40.0%
! TAGCTAGAGCGAACTGTTTT+TGG - chr4_1:7129674-7129693 Msa0532680:three_prime_UTR 40.0%
!! AGCTAGAGCGAACTGTTTTT+GGG - chr4_1:7129675-7129694 Msa0532680:three_prime_UTR 40.0%
TAATTAGTACTTGGACGCAC+GGG - chr4_1:7129791-7129810 Msa0532680:exon 40.0%
! CGGGAAGTTGATTATCTCAT+TGG - chr4_1:7129810-7129829 Msa0532680:CDS 40.0%
!! TGGTGGTTGTTGTTGTCTTT+TGG + chr4_1:7129901-7129920 None:intergenic 40.0%
ATGTAGTCGATCCGATTTAG+TGG + chr4_1:7129933-7129952 None:intergenic 40.0%
GCAACTTCGTGAAAGTTAAG+GGG + chr4_1:7130062-7130081 None:intergenic 40.0%
CGCAACTTCGTGAAAGTTAA+GGG + chr4_1:7130063-7130082 None:intergenic 40.0%
TCGCAACTTCGTGAAAGTTA+AGG + chr4_1:7130064-7130083 None:intergenic 40.0%
! CTTTCACGAAGTTGCGATTT+TGG - chr4_1:7130067-7130086 Msa0532680:intron 40.0%
AATTACCCCCTGAAAGTTAG+GGG + chr4_1:7130124-7130143 None:intergenic 40.0%
CAATTACCCCCTGAAAGTTA+GGG + chr4_1:7130125-7130144 None:intergenic 40.0%
TCAATTACCCCCTGAAAGTT+AGG + chr4_1:7130126-7130145 None:intergenic 40.0%
! GGGGTGTTACACTTAAAACA+AGG + chr4_1:7130472-7130491 None:intergenic 40.0%
GGAGAGAGAGAAACTAAGAA+TGG + chr4_1:7130762-7130781 None:intergenic 40.0%
!!! GAGTTGGTGATTTTCATTGC+TGG - chr4_1:7131065-7131084 Msa0532680:intron 40.0%
TTTCAGTTCTTTAGCGACCA+CGG - chr4_1:7131143-7131162 Msa0532680:CDS 40.0%
AAGCAAAATTACTGCAACCG+TGG + chr4_1:7131163-7131182 None:intergenic 40.0%
! ACGGTTGCAGTAATTTTGCT+TGG - chr4_1:7131162-7131181 Msa0532680:CDS 40.0%
!!! CAATCGATTGTTTTAGGACG+TGG - chr4_1:7131229-7131248 Msa0532680:CDS 40.0%
CACACGGACCCTAAAAATAA+TGG + chr4_1:7131506-7131525 None:intergenic 40.0%
!!! CATTATTTTTAGGGTCCGTG+TGG - chr4_1:7131504-7131523 Msa0532680:intron 40.0%
ATATATACCCAAACCAACGG+TGG + chr4_1:7131706-7131725 None:intergenic 40.0%
GAGAGAATGAGATGAGATAG+TGG - chr4_1:7132130-7132149 Msa0532680:intron 40.0%
CTGAAAGAGATAAAGAGAGG+GGG - chr4_1:7132172-7132191 Msa0532680:intron 40.0%
CTTGTTTATCTCCCACTCAA+AGG + chr4_1:7132278-7132297 None:intergenic 40.0%
ATGAAATGAGAGGGAGAGTT+TGG + chr4_1:7132328-7132347 None:intergenic 40.0%
GAGAGAAGAGATGAAATGAG+AGG + chr4_1:7132338-7132357 None:intergenic 40.0%
GTAGGTCCTTAAACTACTTG+AGG - chr4_1:7132592-7132611 Msa0532680:intron 40.0%
! TGGTCTCTTTCTCTTTGAAG+GGG + chr4_1:7133283-7133302 None:intergenic 40.0%
GTGGTCTCTTTCTCTTTGAA+GGG + chr4_1:7133284-7133303 None:intergenic 40.0%
TGTGGTCTCTTTCTCTTTGA+AGG + chr4_1:7133285-7133304 None:intergenic 40.0%
CTTGACGATATTTCCGAATG+TGG + chr4_1:7133303-7133322 None:intergenic 40.0%
!!! TCATTCTTGTTTTCGGGGAA+AGG - chr4_1:7133636-7133655 Msa0532680:intron 40.0%
! TGTTCACGATACCGTTTTGT+AGG - chr4_1:7133698-7133717 Msa0532680:intron 40.0%
GCGAACAAGAGGATTTCTTT+AGG - chr4_1:7133806-7133825 Msa0532680:intron 40.0%
! GATTTCTTTAGGGACCGATT+TGG - chr4_1:7133817-7133836 Msa0532680:intron 40.0%
!! TGGCCTTTTTAAGAGGGTTT+TGG - chr4_1:7133898-7133917 Msa0532680:intron 40.0%
GCTAAGGACATAATCACTTC+AGG + chr4_1:7134037-7134056 None:intergenic 40.0%
! TATATTTGTTGGGGTAGCCA+AGG + chr4_1:7134094-7134113 None:intergenic 40.0%
! TCGACAACTGAACTTGTTTG+GGG + chr4_1:7134180-7134199 None:intergenic 40.0%
AAGAACTCCTCGATAGAATG+GGG + chr4_1:7134891-7134910 None:intergenic 40.0%
CAAGAACTCCTCGATAGAAT+GGG + chr4_1:7134892-7134911 None:intergenic 40.0%
AAAACGTACCTGGTAATTGG+AGG + chr4_1:7135304-7135323 None:intergenic 40.0%
ACCCAACACATCATTCTTTC+CGG - chr4_1:7135494-7135513 Msa0532680:intron 40.0%
TCCGGAAAGAATGATGTGTT+GGG + chr4_1:7135498-7135517 None:intergenic 40.0%
TTCCGGAAAGAATGATGTGT+TGG + chr4_1:7135499-7135518 None:intergenic 40.0%
AACACATCATTCTTTCCGGA+AGG - chr4_1:7135498-7135517 Msa0532680:intron 40.0%
ACACATCATTCTTTCCGGAA+GGG - chr4_1:7135499-7135518 Msa0532680:intron 40.0%
ATTCACAAGACATACCCTTC+CGG + chr4_1:7135516-7135535 None:intergenic 40.0%
! TTTGATTTCCTCGTAAGAGG+AGG - chr4_1:7135634-7135653 Msa0532680:intron 40.0%
CAACACTTGGAATAGCAGAA+AGG - chr4_1:7135663-7135682 Msa0532680:intron 40.0%
! AGCAGAAAGGGCATAAAAGA+AGG - chr4_1:7135676-7135695 Msa0532680:intron 40.0%
GTTAGAGACAGAATGAACCA+TGG - chr4_1:7135746-7135765 Msa0532680:intron 40.0%
!! GCATTTACTGACTCTCTCTT+TGG + chr4_1:7135772-7135791 None:intergenic 40.0%
GATATATTTGCCCATACACC+AGG - chr4_1:7136168-7136187 Msa0532680:intron 40.0%
CATGTATGTACCTGGTGTAT+GGG + chr4_1:7136181-7136200 None:intergenic 40.0%
CTAGGCAAAAACCTAGTTAG+TGG - chr4_1:7136278-7136297 Msa0532680:intron 40.0%
! CATGATTTGTAAGGCACTTG+TGG + chr4_1:7136309-7136328 None:intergenic 40.0%
! AGGTGTGGTCATGATTTGTA+AGG + chr4_1:7136318-7136337 None:intergenic 40.0%
GTTTGCATGGTGGTTTATCA+TGG - chr4_1:7136384-7136403 Msa0532680:intron 40.0%
GTGGTTTATCATGGTTGTAG+TGG - chr4_1:7136393-7136412 Msa0532680:intron 40.0%
ATGGTTGTAGTGGTGTGATT+TGG - chr4_1:7136403-7136422 Msa0532680:intron 40.0%
! TTGTAGTGGTGTGATTTGGA+CGG - chr4_1:7136407-7136426 Msa0532680:intron 40.0%
AGGGTATGAGTAGCTGAATA+GGG + chr4_1:7136508-7136527 None:intergenic 40.0%
TAATTGGTGCAACTGCATAC+AGG - chr4_1:7136969-7136988 Msa0532680:intron 40.0%
AATTGGTGCAACTGCATACA+GGG - chr4_1:7136970-7136989 Msa0532680:intron 40.0%
CAATATCCTTGGCCAAGATA+TGG + chr4_1:7137313-7137332 None:intergenic 40.0%
TAGCAAGTAGCTCATTGATC+AGG + chr4_1:7137484-7137503 None:intergenic 40.0%
GTCACATATGGTATTTGACC+TGG + chr4_1:7137581-7137600 None:intergenic 40.0%
GGGAAGATCCCAATGAAAAA+GGG + chr4_1:7137603-7137622 None:intergenic 40.0%
ATACTCATCTTGTAAGGCCT+GGG + chr4_1:7137624-7137643 None:intergenic 40.0%
!! CTCTCTAAAGTGTGAGTGTA+TGG + chr4_1:7137781-7137800 None:intergenic 40.0%
! CAACTATGTTGTTGGTTGGT+TGG + chr4_1:7137981-7138000 None:intergenic 40.0%
CTTCGTGGATATATGCTTCA+AGG - chr4_1:7138154-7138173 Msa0532680:intron 40.0%
TTGGAGACAGAGTAAAGCAT+TGG - chr4_1:7138180-7138199 Msa0532680:intron 40.0%
! TGGAGACAGAGTAAAGCATT+GGG - chr4_1:7138181-7138200 Msa0532680:intron 40.0%
GAATACATCAGATTGGTACC+AGG - chr4_1:7138235-7138254 Msa0532680:intron 40.0%
ACCACATATCAGGCTCAAAA+TGG - chr4_1:7138308-7138327 Msa0532680:intron 40.0%
! ACCATTTTGAGCCTGATATG+TGG + chr4_1:7138312-7138331 None:intergenic 40.0%
GCATTGGATTAAACTCTCAC+TGG - chr4_1:7138339-7138358 Msa0532680:intron 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG + chr4_1:7138371-7138390 None:intergenic 40.0%
! CGGCAGCTTTTAGATCTAAT+GGG + chr4_1:7138385-7138404 None:intergenic 40.0%
! TCGGCAGCTTTTAGATCTAA+TGG + chr4_1:7138386-7138405 None:intergenic 40.0%
CCCTTGATTTCATGTTTGGA+TGG - chr4_1:7138411-7138430 Msa0532680:intron 40.0%
ACCATGGATCACGACAAAAT+TGG - chr4_1:7138467-7138486 Msa0532680:intron 40.0%
CCATGGATCACGACAAAATT+GGG - chr4_1:7138468-7138487 Msa0532680:intron 40.0%
TTTATACAGCCGCTAACAAC+AGG - chr4_1:7138528-7138547 Msa0532680:intron 40.0%
GGATACTTTCCTGTTGTTAG+CGG + chr4_1:7138540-7138559 None:intergenic 40.0%
! AGGAATTGGTTTCGTTGCAT+TGG + chr4_1:7138679-7138698 None:intergenic 40.0%
GATCCAGACTGTATAGGAAT+TGG + chr4_1:7138693-7138712 None:intergenic 40.0%
ATTCCTATACAGTCTGGATC+AGG - chr4_1:7138693-7138712 Msa0532680:intron 40.0%
CTTACCACTCCTAATGAAGA+TGG - chr4_1:7138783-7138802 Msa0532680:intron 40.0%
TATGCCATCTTCATTAGGAG+TGG + chr4_1:7138790-7138809 None:intergenic 40.0%
GGCTATATGTTTGTCCAAAG+GGG - chr4_1:7139005-7139024 Msa0532680:intron 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG - chr4_1:7139522-7139541 Msa0532680:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG - chr4_1:7139537-7139556 Msa0532680:intron 40.0%
! ATACTTTGCATGGTCCCTTT+TGG - chr4_1:7139560-7139579 Msa0532680:intron 40.0%
! CCCTTTTGGACAACTTTGAA+TGG - chr4_1:7139574-7139593 Msa0532680:intron 40.0%
AAGAAACTTCCTAAACCACC+GGG + chr4_1:7139679-7139698 None:intergenic 40.0%
CAAGAAACTTCCTAAACCAC+CGG + chr4_1:7139680-7139699 None:intergenic 40.0%
AGCTCACACAGTATTATTGG+TGG + chr4_1:7139741-7139760 None:intergenic 40.0%
TGTTAGGAGACAAGCGAACA+TGG - chr4_1:7129639-7129658 Msa0532680:three_prime_UTR 45.0%
ATTTCAGCCCCCTAACTTTC+AGG - chr4_1:7130113-7130132 Msa0532680:CDS 45.0%
TTTCAGCCCCCTAACTTTCA+GGG - chr4_1:7130114-7130133 Msa0532680:CDS 45.0%
ATTACCCCCTGAAAGTTAGG+GGG + chr4_1:7130123-7130142 None:intergenic 45.0%
CTTAGTTTCTCTCTCTCCAG+TGG - chr4_1:7130764-7130783 Msa0532680:CDS 45.0%
!!! GATTGTTTTAGGACGTGGGT+TGG - chr4_1:7131234-7131253 Msa0532680:CDS 45.0%
TCCTTATCATGTGCACCACA+CGG + chr4_1:7131522-7131541 None:intergenic 45.0%
! ATGATGATCCACCGTTGGTT+TGG - chr4_1:7131695-7131714 Msa0532680:intron 45.0%
!! TGATGATCCACCGTTGGTTT+GGG - chr4_1:7131696-7131715 Msa0532680:intron 45.0%
AGACCTCCCAAACGACATTA+TGG - chr4_1:7131761-7131780 Msa0532680:intron 45.0%
! TCTCCATAATGTCGTTTGGG+AGG + chr4_1:7131767-7131786 None:intergenic 45.0%
! ACTTTAGAGAGGATGGGAGA+GGG + chr4_1:7132362-7132381 None:intergenic 45.0%
! AACTTTAGAGAGGATGGGAG+AGG + chr4_1:7132363-7132382 None:intergenic 45.0%
AAAAGGAGAGAGCTGAGAGA+GGG + chr4_1:7132476-7132495 None:intergenic 45.0%
! GGTCTCTTTCTCTTTGAAGG+GGG + chr4_1:7133282-7133301 None:intergenic 45.0%
!! TTGTTTTCGGGGAAAGGTCA+TGG - chr4_1:7133642-7133661 Msa0532680:intron 45.0%
CCATTCACTCATAAGAGGAG+GGG + chr4_1:7133943-7133962 None:intergenic 45.0%
GCCATTCACTCATAAGAGGA+GGG + chr4_1:7133944-7133963 None:intergenic 45.0%
TGCCATTCACTCATAAGAGG+AGG + chr4_1:7133945-7133964 None:intergenic 45.0%
GTCTGCCATTCACTCATAAG+AGG + chr4_1:7133948-7133967 None:intergenic 45.0%
TATGAGTGAATGGCAGACGA+AGG - chr4_1:7133950-7133969 Msa0532680:intron 45.0%
ATGAGTGAATGGCAGACGAA+GGG - chr4_1:7133951-7133970 Msa0532680:intron 45.0%
GAAGAACATCAGGGTGAAAC+TGG + chr4_1:7134010-7134029 None:intergenic 45.0%
TCAGGGTGAGAAGAACATCA+GGG + chr4_1:7134019-7134038 None:intergenic 45.0%
TTCAGGGTGAGAAGAACATC+AGG + chr4_1:7134020-7134039 None:intergenic 45.0%
TGATTATGTCCTTAGCCCCA+GGG - chr4_1:7134041-7134060 Msa0532680:intron 45.0%
GCGTAGCCCTTCATATACAA+GGG - chr4_1:7134064-7134083 Msa0532680:intron 45.0%
CGTAGCCCTTCATATACAAG+GGG - chr4_1:7134065-7134084 Msa0532680:intron 45.0%
GGCTACCCCTTGTATATGAA+GGG + chr4_1:7134073-7134092 None:intergenic 45.0%
AGGCTACCCCTTGTATATGA+AGG + chr4_1:7134074-7134093 None:intergenic 45.0%
TCATATACAAGGGGTAGCCT+TGG - chr4_1:7134074-7134093 Msa0532680:intron 45.0%
GCAAGAACTCCTCGATAGAA+TGG + chr4_1:7134893-7134912 None:intergenic 45.0%
TCTATCGAGGAGTTCTTGCA+TGG - chr4_1:7134894-7134913 Msa0532680:intron 45.0%
! GCTAAATCGGAGCAGTTTTC+CGG - chr4_1:7135254-7135273 Msa0532680:intron 45.0%
! TGCTATTCCAAGTGTTGTGC+CGG + chr4_1:7135660-7135679 None:intergenic 45.0%
!! GAAGGTGCTGTAAGTGAAGA+CGG - chr4_1:7136126-7136145 Msa0532680:intron 45.0%
GCATGTATGTACCTGGTGTA+TGG + chr4_1:7136182-7136201 None:intergenic 45.0%
TTGTGGCCTATCCACTAACT+AGG + chr4_1:7136292-7136311 None:intergenic 45.0%
CATGACCACACCTAATTGGT+AGG - chr4_1:7136325-7136344 Msa0532680:intron 45.0%
CACTACCTACCAATTAGGTG+TGG + chr4_1:7136333-7136352 None:intergenic 45.0%
CACACCTAATTGGTAGGTAG+TGG - chr4_1:7136331-7136350 Msa0532680:intron 45.0%
! ACCTAATTGGTAGGTAGTGG+TGG - chr4_1:7136334-7136353 Msa0532680:intron 45.0%
ACCACCACTACCTACCAATT+AGG + chr4_1:7136338-7136357 None:intergenic 45.0%
!! AATGGTGGTGTTGGTTTGCA+TGG - chr4_1:7136371-7136390 Msa0532680:intron 45.0%
! GAGGGTATGAGTAGCTGAAT+AGG + chr4_1:7136509-7136528 None:intergenic 45.0%
AACTCTAATGCCACTCCATG+TGG - chr4_1:7136911-7136930 Msa0532680:intron 45.0%
ACTGCATACAGGGATGGTAA+AGG - chr4_1:7136980-7136999 Msa0532680:intron 45.0%
CATACAGGGATGGTAAAGGA+TGG - chr4_1:7136984-7137003 Msa0532680:intron 45.0%
GATTCTCCATATCTTGGCCA+AGG - chr4_1:7137304-7137323 Msa0532680:intron 45.0%
GCAGAAGGAAAACTAAGTGG+CGG - chr4_1:7137425-7137444 Msa0532680:intron 45.0%
GGGGAAGATCCCAATGAAAA+AGG + chr4_1:7137604-7137623 None:intergenic 45.0%
! TTTTCATTGGGATCTTCCCC+AGG - chr4_1:7137604-7137623 Msa0532680:intron 45.0%
TACTCATCTTGTAAGGCCTG+GGG + chr4_1:7137623-7137642 None:intergenic 45.0%
CATACTCATCTTGTAAGGCC+TGG + chr4_1:7137625-7137644 None:intergenic 45.0%
CAGGCCTTACAAGATGAGTA+TGG - chr4_1:7137623-7137642 Msa0532680:intron 45.0%
GCCTTACAAGATGAGTATGG+AGG - chr4_1:7137626-7137645 Msa0532680:intron 45.0%
GCCTCCATACTCATCTTGTA+AGG + chr4_1:7137630-7137649 None:intergenic 45.0%
! AGCAAGAAGTTGGTTGTGTG+TGG + chr4_1:7138261-7138280 None:intergenic 45.0%
!! CATGAAATCAAGGGCGTCTT+CGG + chr4_1:7138405-7138424 None:intergenic 45.0%
GACGCCCTTGATTTCATGTT+TGG - chr4_1:7138407-7138426 Msa0532680:intron 45.0%
GACCGTTTCTACAACAACCA+TGG - chr4_1:7138451-7138470 Msa0532680:intron 45.0%
! CCCAATTTTGTCGTGATCCA+TGG + chr4_1:7138471-7138490 None:intergenic 45.0%
!! AGGAAAGTATCCAGCAAGCT+TGG - chr4_1:7138548-7138567 Msa0532680:intron 45.0%
ACATAAGACACCAAGCTTGC+TGG + chr4_1:7138561-7138580 None:intergenic 45.0%
! GCAGTGAACGTTGGTAAATC+TGG + chr4_1:7138585-7138604 None:intergenic 45.0%
ATGGGACATACATTGGAGCA+TGG - chr4_1:7138899-7138918 Msa0532680:intron 45.0%
TGGGACATACATTGGAGCAT+GGG - chr4_1:7138900-7138919 Msa0532680:intron 45.0%
AATATGTGCAGGCTGCAACT+TGG - chr4_1:7138984-7139003 Msa0532680:intron 45.0%
TGTTTGTCCAAAGGGGATTC+AGG - chr4_1:7139012-7139031 Msa0532680:intron 45.0%
GGACCTACTGTTGTACACAA+AGG - chr4_1:7139033-7139052 Msa0532680:intron 45.0%
! CGAGATACAAGGGGTGATTT+TGG + chr4_1:7139938-7139957 None:intergenic 45.0%
GTGTGTTTGTCGCATTTGTG+TGG - chr4_1:7140052-7140071 Msa0532680:intron 45.0%
! TTGCCTTTCTTGTTTCGCTC+AGG - chr4_1:7140081-7140100 Msa0532680:intron 45.0%
AGACCTGAGCGAAACAAGAA+AGG + chr4_1:7140087-7140106 None:intergenic 45.0%
! TTCTTGTTTCGCTCAGGTCT+TGG - chr4_1:7140087-7140106 Msa0532680:intron 45.0%
!! ATTTAAATGAAAAAAAAATT+GGG + chr4_1:7134823-7134842 None:intergenic 5.0%
!!! TATAATTTTTATTTAAGAAA+TGG + chr4_1:7135804-7135823 None:intergenic 5.0%
!!! AAAATTATTTGATTTATTTA+AGG + chr4_1:7137124-7137143 None:intergenic 5.0%
!!! CTTATTTTAATAAAAAAAAA+AGG + chr4_1:7139972-7139991 None:intergenic 5.0%
TTCAGCCCCCTAACTTTCAG+GGG - chr4_1:7130115-7130134 Msa0532680:CDS 50.0%
GTTTCTCTCTCTCCAGTGGT+AGG - chr4_1:7130768-7130787 Msa0532680:CDS 50.0%
GAAACACAACCACCTACCAC+TGG + chr4_1:7130783-7130802 None:intergenic 50.0%
! TCATTGTTTGGGACTGCCGT+GGG + chr4_1:7130919-7130938 None:intergenic 50.0%
TCCGTGTGGTGCACATGATA+AGG - chr4_1:7131518-7131537 Msa0532680:intron 50.0%
AAAGGAGAGAGCTGAGAGAG+GGG + chr4_1:7132475-7132494 None:intergenic 50.0%
CAAAAGGAGAGAGCTGAGAG+AGG + chr4_1:7132477-7132496 None:intergenic 50.0%
! CTCTTTCTCTTTGAAGGGGG+TGG + chr4_1:7133279-7133298 None:intergenic 50.0%
TCGTCAAGTACGGTGCAATC+AGG - chr4_1:7133315-7133334 Msa0532680:intron 50.0%
TCACTCATAAGAGGAGGGGT+GGG + chr4_1:7133939-7133958 None:intergenic 50.0%
TTCACTCATAAGAGGAGGGG+TGG + chr4_1:7133940-7133959 None:intergenic 50.0%
CCCCTCCTCTTATGAGTGAA+TGG - chr4_1:7133940-7133959 Msa0532680:intron 50.0%
GCAGACGAAGGGAGTTTCTT+GGG - chr4_1:7133962-7133981 Msa0532680:intron 50.0%
CAGACGAAGGGAGTTTCTTG+GGG - chr4_1:7133963-7133982 Msa0532680:intron 50.0%
AGACGAAGGGAGTTTCTTGG+GGG - chr4_1:7133964-7133983 Msa0532680:intron 50.0%
TGAAACTGGACATCCCGACT+AGG + chr4_1:7133996-7134015 None:intergenic 50.0%
GTGATTATGTCCTTAGCCCC+AGG - chr4_1:7134040-7134059 Msa0532680:intron 50.0%
GATTATGTCCTTAGCCCCAG+GGG - chr4_1:7134042-7134061 Msa0532680:intron 50.0%
GGCGTAGCCCTTCATATACA+AGG - chr4_1:7134063-7134082 Msa0532680:intron 50.0%
TCGACAACCCCATTCTATCG+AGG - chr4_1:7134881-7134900 Msa0532680:intron 50.0%
! AATCGGAGCAGTTTTCCGGA+AGG - chr4_1:7135258-7135277 Msa0532680:intron 50.0%
!! TACTGGCTCCTCCAATTACC+AGG - chr4_1:7135293-7135312 Msa0532680:intron 50.0%
ATTTCCTCGTAAGAGGAGGC+CGG - chr4_1:7135638-7135657 Msa0532680:intron 50.0%
! ACTGACTCTCTCTTTGGCCA+TGG + chr4_1:7135766-7135785 None:intergenic 50.0%
GCTGTAAGTGAAGACGGAAG+AGG - chr4_1:7136132-7136151 Msa0532680:intron 50.0%
AGTGAAGACGGAAGAGGAGT+TGG - chr4_1:7136138-7136157 Msa0532680:intron 50.0%
!! ACGGAAGAGGAGTTGGTACA+TGG - chr4_1:7136145-7136164 Msa0532680:intron 50.0%
!! CGGAAGAGGAGTTGGTACAT+GGG - chr4_1:7136146-7136165 Msa0532680:intron 50.0%
ACACCACCATTGAACCACCT+GGG + chr4_1:7136362-7136381 None:intergenic 50.0%
AACACCACCATTGAACCACC+TGG + chr4_1:7136363-7136382 None:intergenic 50.0%
! AGGTGGTTCAATGGTGGTGT+TGG - chr4_1:7136362-7136381 Msa0532680:intron 50.0%
ATGCCACTCCATGTGGCTAA+TGG - chr4_1:7136918-7136937 Msa0532680:intron 50.0%
TGCCACTCCATGTGGCTAAT+GGG - chr4_1:7136919-7136938 Msa0532680:intron 50.0%
GATTCCACCCATTAGCCACA+TGG + chr4_1:7136929-7136948 None:intergenic 50.0%
CAGCTGCATGAGCAAGAAGT+TGG + chr4_1:7138271-7138290 None:intergenic 50.0%
GATTGCTCTGCAGTGAACGT+TGG + chr4_1:7138594-7138613 None:intergenic 50.0%
! TGCATTGGCAGCATACATGC+TGG + chr4_1:7138664-7138683 None:intergenic 50.0%
CCTATACAGTCTGGATCAGG+CGG - chr4_1:7138696-7138715 Msa0532680:intron 50.0%
AGTAGGTCCTGAATCCCCTT+TGG + chr4_1:7139022-7139041 None:intergenic 50.0%
! GACGGATACACTGTGCGTTT+TGG - chr4_1:7139600-7139619 Msa0532680:intron 50.0%
TCAGCCCCCTAACTTTCAGG+GGG - chr4_1:7130116-7130135 Msa0532680:CDS 55.0%
GGAGCTTCTATGGTGCAGTC+AGG + chr4_1:7130699-7130718 None:intergenic 55.0%
TCTCTCTCTCCAGTGGTAGG+TGG - chr4_1:7130771-7130790 Msa0532680:CDS 55.0%
! CTCATTGTTTGGGACTGCCG+TGG + chr4_1:7130920-7130939 None:intergenic 55.0%
CACGGCAGTCCCAAACAATG+AGG - chr4_1:7130918-7130937 Msa0532680:CDS 55.0%
GGGGAAAGGTCATGGTTGTG+TGG - chr4_1:7133650-7133669 Msa0532680:intron 55.0%
ACTCATAAGAGGAGGGGTGG+GGG + chr4_1:7133937-7133956 None:intergenic 55.0%
CACTCATAAGAGGAGGGGTG+GGG + chr4_1:7133938-7133957 None:intergenic 55.0%
GGCAGACGAAGGGAGTTTCT+TGG - chr4_1:7133961-7133980 Msa0532680:intron 55.0%
ACTGGACATCCCGACTAGGT+CGG + chr4_1:7133992-7134011 None:intergenic 55.0%
ATATGAAGGGCTACGCCCCT+GGG + chr4_1:7134060-7134079 None:intergenic 55.0%
TATATGAAGGGCTACGCCCC+TGG + chr4_1:7134061-7134080 None:intergenic 55.0%
GTGGTTCCCAGGTGGTTCAA+TGG - chr4_1:7136353-7136372 Msa0532680:intron 55.0%
GTTCCCAGGTGGTTCAATGG+TGG - chr4_1:7136356-7136375 Msa0532680:intron 55.0%
!! GGTGGTGTTGGTTTGCATGG+TGG - chr4_1:7136374-7136393 Msa0532680:intron 55.0%
! GTGTGATTTGGACGGTGTCG+TGG - chr4_1:7136415-7136434 Msa0532680:intron 55.0%
!! TGATTTGGACGGTGTCGTGG+TGG - chr4_1:7136418-7136437 Msa0532680:intron 55.0%
CACCCATTAGCCACATGGAG+TGG + chr4_1:7136924-7136943 None:intergenic 55.0%
CACTCCATGTGGCTAATGGG+TGG - chr4_1:7136922-7136941 Msa0532680:intron 55.0%
GGTGCAACTGCATACAGGGA+TGG - chr4_1:7136974-7136993 Msa0532680:intron 55.0%
AGTGGCGGTGTAAACCAAGC+AGG - chr4_1:7137440-7137459 Msa0532680:intron 55.0%
! GAAGTTGGTTGTGTGTGGCC+TGG + chr4_1:7138256-7138275 None:intergenic 55.0%
CCGCCTGATCCAGACTGTAT+AGG + chr4_1:7138699-7138718 None:intergenic 55.0%
TATGAAGGGCTACGCCCCTG+GGG + chr4_1:7134059-7134078 None:intergenic 60.0%
! GGTAGGTAGTGGTGGTTCCC+AGG - chr4_1:7136342-7136361 Msa0532680:intron 60.0%
! AGGTAGTGGTGGTTCCCAGG+TGG - chr4_1:7136345-7136364 Msa0532680:intron 60.0%
!! CGGTGTCGTGGTGGAAACTC+TGG - chr4_1:7136427-7136446 Msa0532680:intron 60.0%
GACACCCTAAGCTCTCTGCC+CGG - chr4_1:7139658-7139677 Msa0532680:intron 60.0%
ACCACCGGGCAGAGAGCTTA+GGG + chr4_1:7139665-7139684 None:intergenic 60.0%
AACCACCGGGCAGAGAGCTT+AGG + chr4_1:7139666-7139685 None:intergenic 60.0%
AGCTCTCTGCCCGGTGGTTT+AGG - chr4_1:7139667-7139686 Msa0532680:intron 60.0%
CATAAGAGGAGGGGTGGGGG+TGG + chr4_1:7133934-7133953 None:intergenic 65.0%
!! CTTGGGGGTGCCGACCTAGT+CGG - chr4_1:7133979-7133998 Msa0532680:intron 65.0%
!! TTGGGGGTGCCGACCTAGTC+GGG - chr4_1:7133980-7133999 Msa0532680:intron 65.0%
! TGTGCCGGCCTCCTCTTACG+AGG + chr4_1:7135645-7135664 None:intergenic 65.0%
GAGGAGGCCGGCACAACACT+TGG - chr4_1:7135650-7135669 Msa0532680:intron 65.0%
! TCTGGATCAGGCGGCGCTGA+CGG - chr4_1:7138705-7138724 Msa0532680:intron 65.0%
ACCCTAAGCTCTCTGCCCGG+TGG - chr4_1:7139661-7139680 Msa0532680:intron 65.0%
GGGCTACGCCCCTGGGGCTA+AGG + chr4_1:7134053-7134072 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 7129348 7140174 7129348 ID=Msa0532680;Name=Msa0532680
chr4_1 mRNA 7129348 7140174 7129348 ID=Msa0532680-mRNA-1;Parent=Msa0532680;Name=Msa0532680-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.58|0.69|0.92|0.58|0.69|13|452|449
chr4_1 exon 7129348 7129983 7129348 ID=Msa0532680-mRNA-1:exon:2476;Parent=Msa0532680-mRNA-1
chr4_1 exon 7130100 7130208 7130100 ID=Msa0532680-mRNA-1:exon:2475;Parent=Msa0532680-mRNA-1
chr4_1 exon 7130428 7130527 7130428 ID=Msa0532680-mRNA-1:exon:2474;Parent=Msa0532680-mRNA-1
chr4_1 exon 7130601 7130635 7130601 ID=Msa0532680-mRNA-1:exon:2473;Parent=Msa0532680-mRNA-1
chr4_1 exon 7130754 7130995 7130754 ID=Msa0532680-mRNA-1:exon:2472;Parent=Msa0532680-mRNA-1
chr4_1 exon 7131099 7131183 7131099 ID=Msa0532680-mRNA-1:exon:2471;Parent=Msa0532680-mRNA-1
chr4_1 exon 7131193 7131383 7131193 ID=Msa0532680-mRNA-1:exon:2470;Parent=Msa0532680-mRNA-1
chr4_1 exon 7131853 7131940 7131853 ID=Msa0532680-mRNA-1:exon:2469;Parent=Msa0532680-mRNA-1
chr4_1 exon 7132016 7132093 7132016 ID=Msa0532680-mRNA-1:exon:2468;Parent=Msa0532680-mRNA-1
chr4_1 exon 7132186 7132261 7132186 ID=Msa0532680-mRNA-1:exon:2467;Parent=Msa0532680-mRNA-1
chr4_1 exon 7134208 7134311 7134208 ID=Msa0532680-mRNA-1:exon:2466;Parent=Msa0532680-mRNA-1
chr4_1 exon 7136196 7136247 7136196 ID=Msa0532680-mRNA-1:exon:2465;Parent=Msa0532680-mRNA-1
chr4_1 exon 7140169 7140174 7140169 ID=Msa0532680-mRNA-1:exon:2464;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7140169 7140174 7140169 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7136196 7136247 7136196 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7134208 7134311 7134208 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7132186 7132261 7132186 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7132016 7132093 7132016 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7131853 7131940 7131853 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7131193 7131383 7131193 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7131099 7131183 7131099 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7130754 7130995 7130754 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7130601 7130635 7130601 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7130428 7130527 7130428 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7130100 7130208 7130100 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 CDS 7129800 7129983 7129800 ID=Msa0532680-mRNA-1:cds;Parent=Msa0532680-mRNA-1
chr4_1 three_prime_UTR 7129348 7129799 7129348 ID=Msa0532680-mRNA-1:three_prime_utr;Parent=Msa0532680-mRNA-1
Gene Sequence

>Msa0532680

ATGGATACCACCCCCTTCAAAGAGAAAGAGACCACATTCGGAAATATCGTCAAGTACGGGGCGGAACCTGTTATTGCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAAAGGAAAACTAAGTGGCGGTGTAAACCAAGCAGGAATCATATTTTACAACAACCTGATCAATGAGCTACTTGCTAATGGTCAAATACCATATGTGACCCTTTTTCATTGGGATCTTCCCCAGGCCTTACAAGATGAGTATGGAGGCTTTGTCAGCACGAATATTTTAGATGATTTTAAGGACTTCGTGGATATATGCTTCAAGGAATTTGGAGACAGAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAATACATCAGATTGGTACCAGGCCACACACAACCAACTTCTTGCTCATGCAGCTGTTTTCGAATTGTATAAAACCACATATCAGGCTCAAAATGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCTAAAAGCTGCCGAAGACGCCCTTGATTTCATGTTTATACAGCCGCTAACAACAGGAAAGTATCCAGCAAGCTTGGTGTCTTATGTGCCAGATTTACCAACGTTCACTGCAGAGCAATCTAAGAGTCTTATTGGGTCATATGATTTTATTGGAATCAATTACTACACCAGCATGTATGCTGCCAATGCAACGAAACCAATTCCTATACAGTCTGGATCAGGCGGCGCTGACGGTGTCAATAGTGTTTTCAATACTGTTAATGTGACTTTAACAGATAAGAATAAAGATGGGACATACATTGGAGCATGGGCTGCAACTTGGCTATATGTTTGTCCAAAGGGGATTCAGGACCTACTGTTGTACACAAAGGAAAAGTATAACAATCCTACGATTATCATAACAGAAAATGGTATGAATGAAGTCAATGATCCTACACTATCACTCGAAGAGGCGCTCATGGATACTAACAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGATCTTAGAAGACACCCTAAGCTCTCTGCCCGGTGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>Msa0532680

MDTTPFKEKETTFGNIVKYGAEPVIASIYADSFELNRSSFPEGFVFGTGSSNYQEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGVNQAGIIFYNNLINELLANGQIPYVTLFHWDLPQALQDEYGGFVSTNILDDFKDFVDICFKEFGDRVKHWVTFNEPFSYTLNTSDWYQATHNQLLAHAAVFELYKTTYQAQNGIGLNSHWFKPYSTDPLDLKAAEDALDFMFIQPLTTGKYPASLVSYVPDLPTFTAEQSKSLIGSYDFIGINYYTSMYAANATKPIPIQSGSGGADGVNSVFNTVNVTLTDKNKDGTYIGAWAATWLYVCPKGIQDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNDLRRHPKLSARWFRKFLEHNRIIG*