Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589450 | XP_003604643.1 | 92.654 | 422 | 29 | 2 | 1 | 420 | 85 | 506 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589450 | sp|Q7XKV2|BGL13_ORYSJ | 53.968 | 441 | 165 | 6 | 2 | 414 | 75 | 505 | 6.33e-163 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589450 | A8TVQ0 | 92.654 | 422 | 29 | 2 | 1 | 420 | 85 | 506 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036230 | Msa0589450 | 0.820595 | 6.313135e-53 | -8.615850e-47 |
| Msa0036580 | Msa0589450 | 0.837855 | 4.062266e-57 | -8.615850e-47 |
| Msa0059880 | Msa0589450 | 0.821666 | 3.576957e-53 | -8.615850e-47 |
| Msa0072030 | Msa0589450 | 0.810649 | 1.037557e-50 | -8.615850e-47 |
| Msa0084160 | Msa0589450 | 0.836284 | 1.024310e-56 | -8.615850e-47 |
| Msa0085710 | Msa0589450 | 0.805108 | 1.565362e-49 | -8.615850e-47 |
| Msa0093530 | Msa0589450 | 0.834885 | 2.314389e-56 | -8.615850e-47 |
| Msa0106130 | Msa0589450 | 0.802402 | 5.705814e-49 | -8.615850e-47 |
| Msa0126960 | Msa0589450 | 0.836049 | 1.175268e-56 | -8.615850e-47 |
| Msa0139270 | Msa0589450 | 0.841078 | 5.910260e-58 | -8.615850e-47 |
| Msa0150910 | Msa0589450 | 0.808228 | 3.433340e-50 | -8.615850e-47 |
| Msa0163340 | Msa0589450 | 0.806936 | 6.455832e-50 | -8.615850e-47 |
| Msa0163370 | Msa0589450 | 0.814218 | 1.723449e-51 | -8.615850e-47 |
| Msa0176620 | Msa0589450 | 0.828332 | 9.534160e-55 | -8.615850e-47 |
| Msa0218060 | Msa0589450 | 0.802064 | 6.697544e-49 | -8.615850e-47 |
| Msa0225910 | Msa0589450 | 0.824848 | 6.462669e-54 | -8.615850e-47 |
| Msa0234120 | Msa0589450 | 0.802109 | 6.556801e-49 | -8.615850e-47 |
| Msa0393900 | Msa0589450 | 0.817745 | 2.811948e-52 | -8.615850e-47 |
| Msa0409250 | Msa0589450 | 0.808065 | 3.719299e-50 | -8.615850e-47 |
| Msa0414480 | Msa0589450 | 0.812191 | 4.801052e-51 | -8.615850e-47 |
| Msa0425950 | Msa0589450 | 0.806980 | 6.318550e-50 | -8.615850e-47 |
| Msa0426030 | Msa0589450 | 0.800453 | 1.430935e-48 | -8.615850e-47 |
| Msa0445530 | Msa0589450 | 0.805790 | 1.126110e-49 | -8.615850e-47 |
| Msa0449360 | Msa0589450 | 0.803508 | 3.371704e-49 | -8.615850e-47 |
| Msa0453970 | Msa0589450 | 0.810219 | 1.285175e-50 | -8.615850e-47 |
| Msa0469550 | Msa0589450 | 0.804173 | 2.452865e-49 | -8.615850e-47 |
| Msa0242390 | Msa0589450 | 0.817819 | 2.705213e-52 | -8.615850e-47 |
| Msa0243970 | Msa0589450 | 0.800837 | 1.195059e-48 | -8.615850e-47 |
| Msa0243990 | Msa0589450 | 0.812974 | 3.236511e-51 | -8.615850e-47 |
| Msa0258010 | Msa0589450 | 0.802508 | 5.426516e-49 | -8.615850e-47 |
| Msa0265060 | Msa0589450 | 0.801069 | 1.071533e-48 | -8.615850e-47 |
| Msa0266640 | Msa0589450 | 0.851963 | 6.299816e-61 | -8.615850e-47 |
| Msa0266650 | Msa0589450 | 0.839260 | 1.762927e-57 | -8.615850e-47 |
| Msa0274260 | Msa0589450 | 0.815118 | 1.089200e-51 | -8.615850e-47 |
| Msa0278940 | Msa0589450 | 0.820291 | 7.411987e-53 | -8.615850e-47 |
| Msa0298270 | Msa0589450 | 0.811310 | 7.463290e-51 | -8.615850e-47 |
| Msa0318370 | Msa0589450 | 0.804511 | 2.085502e-49 | -8.615850e-47 |
| Msa0336640 | Msa0589450 | 0.802311 | 5.959391e-49 | -8.615850e-47 |
| Msa0356200 | Msa0589450 | 0.803825 | 2.897700e-49 | -8.615850e-47 |
| Msa0356250 | Msa0589450 | 0.820757 | 5.793804e-53 | -8.615850e-47 |
| Msa0356320 | Msa0589450 | 0.801039 | 1.086525e-48 | -8.615850e-47 |
| Msa0356410 | Msa0589450 | 0.801494 | 8.769707e-49 | -8.615850e-47 |
| Msa0493710 | Msa0589450 | 0.832228 | 1.065552e-55 | -8.615850e-47 |
| Msa0515260 | Msa0589450 | 0.806091 | 9.732669e-50 | -8.615850e-47 |
| Msa0532610 | Msa0589450 | 0.895066 | 1.364308e-75 | -8.615850e-47 |
| Msa0532660 | Msa0589450 | 0.832534 | 8.949960e-56 | -8.615850e-47 |
| Msa0532670 | Msa0589450 | 0.960190 | 2.809143e-118 | -8.615850e-47 |
| Msa0532680 | Msa0589450 | 0.961103 | 2.579677e-119 | -8.615850e-47 |
| Msa0533510 | Msa0589450 | 0.852008 | 6.119242e-61 | -8.615850e-47 |
| Msa0533520 | Msa0589450 | 0.841012 | 6.148280e-58 | -8.615850e-47 |
| Msa0538440 | Msa0589450 | 0.804652 | 1.948847e-49 | -8.615850e-47 |
| Msa0538450 | Msa0589450 | 0.817831 | 2.689003e-52 | -8.615850e-47 |
| Msa0538520 | Msa0589450 | 0.813612 | 2.343607e-51 | -8.615850e-47 |
| Msa0538650 | Msa0589450 | 0.818173 | 2.250637e-52 | -8.615850e-47 |
| Msa0543740 | Msa0589450 | 0.812697 | 3.721470e-51 | -8.615850e-47 |
| Msa0548760 | Msa0589450 | 0.817035 | 4.063784e-52 | -8.615850e-47 |
| Msa0554660 | Msa0589450 | 0.825466 | 4.615673e-54 | -8.615850e-47 |
| Msa0589450 | Msa0589460 | 0.855519 | 5.973903e-62 | -8.615850e-47 |
| Msa0589450 | Msa0589720 | 0.837732 | 4.368343e-57 | -8.615850e-47 |
| Msa0589450 | Msa0589730 | 0.828068 | 1.103778e-54 | -8.615850e-47 |
| Msa0589450 | Msa0589740 | 0.800376 | 1.483927e-48 | -8.615850e-47 |
| Msa0589450 | Msa0594320 | 0.817813 | 2.713718e-52 | -8.615850e-47 |
| Msa0589450 | Msa0594330 | 0.817248 | 3.638419e-52 | -8.615850e-47 |
| Msa0589450 | Msa0594470 | 0.821602 | 3.700308e-53 | -8.615850e-47 |
| Msa0589450 | Msa0599600 | 0.804528 | 2.068405e-49 | -8.615850e-47 |
| Msa0589450 | Msa0604280 | 0.804750 | 1.859819e-49 | -8.615850e-47 |
| Msa0589450 | Msa0605460 | 0.819826 | 9.470226e-53 | -8.615850e-47 |
| Msa0589450 | Msa0605470 | 0.801966 | 7.014848e-49 | -8.615850e-47 |
| Msa0589450 | Msa0623750 | 0.893770 | 4.613158e-75 | -8.615850e-47 |
| Msa0589450 | Msa0629720 | 0.830249 | 3.265897e-55 | -8.615850e-47 |
| Msa0589450 | Msa0630130 | 0.825535 | 4.446405e-54 | -8.615850e-47 |
| Msa0589450 | Msa0634290 | 0.809530 | 1.808077e-50 | -8.615850e-47 |
| Msa0589450 | Msa0640290 | 0.800384 | 1.478375e-48 | -8.615850e-47 |
| Msa0589450 | Msa0645120 | 0.818032 | 2.421496e-52 | -8.615850e-47 |
| Msa0589450 | Msa0646040 | 0.802380 | 5.767403e-49 | -8.615850e-47 |
| Msa0589450 | Msa0667600 | 0.831336 | 1.768231e-55 | -8.615850e-47 |
| Msa0589450 | Msa0667620 | 0.878708 | 2.256243e-69 | -8.615850e-47 |
| Msa0589450 | Msa0667640 | 0.906356 | 1.619397e-80 | -8.615850e-47 |
| Msa0589450 | Msa0668210 | 0.849068 | 4.098202e-60 | -8.615850e-47 |
| Msa0589450 | Msa0668230 | 0.839525 | 1.504255e-57 | -8.615850e-47 |
| Msa0589450 | Msa0672780 | 0.841874 | 3.647345e-58 | -8.615850e-47 |
| Msa0589450 | Msa0678620 | 0.840299 | 9.451142e-58 | -8.615850e-47 |
| Msa0589450 | Msa0684590 | 0.814337 | 1.621620e-51 | -8.615850e-47 |
| Msa0589450 | Msa0684600 | 0.808528 | 2.963682e-50 | -8.615850e-47 |
| Msa0589450 | Msa0684720 | 0.806590 | 7.640875e-50 | -8.615850e-47 |
| Msa0589450 | Msa0727480 | 0.834803 | 2.426798e-56 | -8.615850e-47 |
| Msa0589450 | Msa0730890 | 0.812479 | 4.153112e-51 | -8.615850e-47 |
| Msa0589450 | Msa0735280 | 0.802786 | 4.756514e-49 | -8.615850e-47 |
| Msa0589450 | Msa0758150 | 0.824560 | 7.556066e-54 | -8.615850e-47 |
| Msa0589450 | Msa0768720 | 0.800677 | 1.288275e-48 | -8.615850e-47 |
| Msa0589450 | Msa0776340 | 0.800745 | 1.248007e-48 | -8.615850e-47 |
| Msa0589450 | Msa0798230 | 0.800411 | 1.459490e-48 | -8.615850e-47 |
| Msa0589450 | Msa0813840 | 0.809090 | 2.247251e-50 | -8.615850e-47 |
| Msa0589450 | Msa0816140 | 0.800665 | 1.295261e-48 | -8.615850e-47 |
| Msa0589450 | Msa0817100 | 0.837614 | 4.685847e-57 | -8.615850e-47 |
| Msa0589450 | Msa0824850 | 0.804535 | 2.061757e-49 | -8.615850e-47 |
| Msa0589450 | Msa0824860 | 0.810351 | 1.203468e-50 | -8.615850e-47 |
| Msa0589450 | Msa0854380 | 0.820948 | 5.237581e-53 | -8.615850e-47 |
| Msa0589450 | Msa0863840 | 0.816415 | 5.595397e-52 | -8.615850e-47 |
| Msa0589450 | Msa0863850 | 0.826053 | 3.349536e-54 | -8.615850e-47 |
| Msa0589450 | Msa0883610 | 0.811656 | 6.276903e-51 | -8.615850e-47 |
| Msa0589450 | Msa0883640 | 0.825993 | 3.460846e-54 | -8.615850e-47 |
| Msa0589450 | Msa0886370 | 0.808354 | 3.227140e-50 | -8.615850e-47 |
| Msa0589450 | Msa0890210 | 0.802384 | 5.755901e-49 | -8.615850e-47 |
| Msa0589450 | Msa0896920 | 0.855119 | 7.814344e-62 | -8.615850e-47 |
| Msa0589450 | Msa0896950 | 0.828243 | 1.002114e-54 | -8.615850e-47 |
| Msa0589450 | Msa0896990 | 0.801405 | 9.145152e-49 | -8.615850e-47 |
| Msa0589450 | Msa0902340 | 0.831251 | 1.855710e-55 | -8.615850e-47 |
| Msa0589450 | Msa0910570 | 0.812379 | 4.367125e-51 | -8.615850e-47 |
| Msa0589450 | Msa0910830 | 0.825344 | 4.933349e-54 | -8.615850e-47 |
| Msa0589450 | Msa0913550 | 0.824498 | 7.812736e-54 | -8.615850e-47 |
| Msa0589450 | Msa0932930 | 0.814613 | 1.409452e-51 | -8.615850e-47 |
| Msa0589450 | Msa0933610 | 0.815664 | 8.233159e-52 | -8.615850e-47 |
| Msa0589450 | Msa0948460 | 0.803423 | 3.511540e-49 | -8.615850e-47 |
| Msa0589450 | Msa0951060 | 0.816221 | 6.183987e-52 | -8.615850e-47 |
| Msa0589450 | Msa0951150 | 0.812731 | 3.657983e-51 | -8.615850e-47 |
| Msa0589450 | Msa0960090 | 0.828738 | 7.609223e-55 | -8.615850e-47 |
| Msa0589450 | Msa0962290 | 0.805679 | 1.188376e-49 | -8.615850e-47 |
| Msa0589450 | Msa0967820 | 0.802130 | 6.491589e-49 | -8.615850e-47 |
| Msa0589450 | Msa0970790 | 0.808019 | 3.804008e-50 | -8.615850e-47 |
| Msa0589450 | Msa0985250 | 0.829357 | 5.386130e-55 | -8.615850e-47 |
| Msa0589450 | Msa0985290 | 0.802744 | 4.850899e-49 | -8.615850e-47 |
| Msa0589450 | Msa0985700 | 0.827385 | 1.610467e-54 | -8.615850e-47 |
| Msa0589450 | Msa0987550 | 0.803299 | 3.725129e-49 | -8.615850e-47 |
| Msa0589450 | Msa0993450 | 0.806941 | 6.441689e-50 | -8.615850e-47 |
| Msa0589450 | Msa0996940 | 0.811813 | 5.802930e-51 | -8.615850e-47 |
| Msa0589450 | Msa0996980 | 0.823335 | 1.464115e-53 | -8.615850e-47 |
| Msa0589450 | Msa1003240 | 0.831779 | 1.375404e-55 | -8.615850e-47 |
| Msa0589450 | Msa1006940 | 0.823203 | 1.571518e-53 | -8.615850e-47 |
| Msa0589450 | Msa1007930 | 0.816230 | 6.154131e-52 | -8.615850e-47 |
| Msa0589450 | Msa1021620 | 0.819747 | 9.871732e-53 | -8.615850e-47 |
| Msa0589450 | Msa1024420 | 0.804233 | 2.383265e-49 | -8.615850e-47 |
| Msa0589450 | Msa1024480 | 0.801422 | 9.074223e-49 | -8.615850e-47 |
| Msa0589450 | Msa1046220 | 0.844966 | 5.449535e-59 | -8.615850e-47 |
| Msa0589450 | Msa1061670 | 0.837835 | 4.110265e-57 | -8.615850e-47 |
| Msa0589450 | Msa1064940 | 0.809363 | 1.964047e-50 | -8.615850e-47 |
| Msa0589450 | Msa1067910 | -0.804338 | 2.266646e-49 | -8.615850e-47 |
| Msa0589450 | Msa1079610 | -0.812423 | 4.272477e-51 | -8.615850e-47 |
| Msa0589450 | Msa1083100 | 0.833361 | 5.572626e-56 | -8.615850e-47 |
| Msa0589450 | Msa1099640 | 0.827374 | 1.620661e-54 | -8.615850e-47 |
| Msa0589450 | Msa1100560 | 0.814252 | 1.693210e-51 | -8.615850e-47 |
| Msa0589450 | Msa1106960 | 0.826244 | 3.017676e-54 | -8.615850e-47 |
| Msa0589450 | Msa1109880 | 0.806713 | 7.196555e-50 | -8.615850e-47 |
| Msa0589450 | Msa1109890 | 0.828025 | 1.130418e-54 | -8.615850e-47 |
| Msa0589450 | Msa1124440 | -0.801301 | 9.607011e-49 | -8.615850e-47 |
| Msa0589450 | Msa1138110 | 0.803313 | 3.700967e-49 | -8.615850e-47 |
| Msa0589450 | Msa1152330 | 0.808029 | 3.785604e-50 | -8.615850e-47 |
| Msa0589450 | Msa1153690 | 0.803576 | 3.264209e-49 | -8.615850e-47 |
| Msa0589450 | Msa1173290 | 0.810962 | 8.878957e-51 | -8.615850e-47 |
| Msa0589450 | Msa1179170 | 0.810925 | 9.044941e-51 | -8.615850e-47 |
| Msa0589450 | Msa1187750 | 0.804283 | 2.327234e-49 | -8.615850e-47 |
| Msa0589450 | Msa1209800 | -0.801210 | 1.002649e-48 | -8.615850e-47 |
| Msa0589450 | Msa1211160 | 0.809410 | 1.918345e-50 | -8.615850e-47 |
| Msa0589450 | Msa1214960 | 0.816407 | 5.618981e-52 | -8.615850e-47 |
| Msa0589450 | Msa1216600 | 0.812172 | 4.847048e-51 | -8.615850e-47 |
| Msa0589450 | Msa1219780 | 0.807686 | 4.478286e-50 | -8.615850e-47 |
| Msa0589450 | Msa1221170 | 0.825711 | 4.038425e-54 | -8.615850e-47 |
| Msa0589450 | Msa1233620 | 0.801612 | 8.294382e-49 | -8.615850e-47 |
| Msa0589450 | Msa1233650 | 0.840400 | 8.898202e-58 | -8.615850e-47 |
| Msa0589450 | Msa1235760 | -0.804681 | 1.921882e-49 | -8.615850e-47 |
| Msa0589450 | Msa1238440 | 0.800133 | 1.662493e-48 | -8.615850e-47 |
| Msa0589450 | Msa1265500 | 0.817496 | 3.199645e-52 | -8.615850e-47 |
| Msa0589450 | Msa1266710 | 0.810383 | 1.184312e-50 | -8.615850e-47 |
| Msa0589450 | Msa1269050 | 0.816061 | 6.714565e-52 | -8.615850e-47 |
| Msa0589450 | Msa1275840 | 0.821787 | 3.353042e-53 | -8.615850e-47 |
| Msa0589450 | Msa1275870 | 0.810630 | 1.047579e-50 | -8.615850e-47 |
| Msa0589450 | Msa1296870 | 0.809382 | 1.944782e-50 | -8.615850e-47 |
| Msa0589450 | Msa1299310 | 0.803430 | 3.499906e-49 | -8.615850e-47 |
| Msa0589450 | Msa1314020 | 0.808613 | 2.841679e-50 | -8.615850e-47 |
| Msa0589450 | Msa1314050 | 0.825578 | 4.343430e-54 | -8.615850e-47 |
| Msa0589450 | Msa1323030 | 0.810268 | 1.254270e-50 | -8.615850e-47 |
| Msa0589450 | Msa1323120 | 0.814367 | 1.597409e-51 | -8.615850e-47 |
| Msa0589450 | Msa1323160 | 0.800912 | 1.153704e-48 | -8.615850e-47 |
| Msa0589450 | Msa1329740 | 0.801999 | 6.908757e-49 | -8.615850e-47 |
| Msa0589450 | Msa1329770 | 0.801416 | 9.097833e-49 | -8.615850e-47 |
| Msa0589450 | Msa1339490 | 0.823010 | 1.743677e-53 | -8.615850e-47 |
| Msa0589450 | Msa1350490 | 0.815745 | 7.899724e-52 | -8.615850e-47 |
| Msa0589450 | Msa1357490 | 0.802662 | 5.044133e-49 | -8.615850e-47 |
| Msa0589450 | Msa1370930 | 0.806575 | 7.695635e-50 | -8.615850e-47 |
| Msa0589450 | Msa1373560 | 0.813261 | 2.798718e-51 | -8.615850e-47 |
| Msa0589450 | Msa1377190 | 0.800188 | 1.620701e-48 | -8.615850e-47 |
| Msa0589450 | Msa1378950 | 0.828502 | 8.677535e-55 | -8.615850e-47 |
| Msa0589450 | Msa1390040 | 0.837343 | 5.496766e-57 | -8.615850e-47 |
| Msa0589450 | Msa1393440 | 0.835951 | 1.244406e-56 | -8.615850e-47 |
| Msa0589450 | Msa1395690 | 0.824375 | 8.351316e-54 | -8.615850e-47 |
| Msa0589450 | Msa1407210 | 0.802759 | 4.817713e-49 | -8.615850e-47 |
| Msa0589450 | Msa1409600 | 0.811308 | 7.472057e-51 | -8.615850e-47 |
| Msa0589450 | Msa1445900 | 0.816110 | 6.547354e-52 | -8.615850e-47 |
| Msa0589450 | Msa1459610 | 0.821061 | 4.931158e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589450 | MtrunA17_Chr4g0006131 | 92.654 | 422 | 29 | 2 | 1 | 420 | 85 | 506 | 0.0 | 807 |
| Msa0589450 | MtrunA17_Chr4g0006111 | 82.452 | 416 | 70 | 2 | 2 | 414 | 109 | 524 | 0.0 | 718 |
| Msa0589450 | MtrunA17_Chr4g0033261 | 68.750 | 416 | 118 | 7 | 2 | 414 | 86 | 492 | 0.0 | 573 |
| Msa0589450 | MtrunA17_Chr4g0033231 | 67.067 | 416 | 125 | 8 | 2 | 414 | 86 | 492 | 0.0 | 560 |
| Msa0589450 | MtrunA17_Chr2g0301231 | 66.329 | 395 | 124 | 3 | 25 | 414 | 1 | 391 | 0.0 | 521 |
| Msa0589450 | MtrunA17_Chr2g0329191 | 59.276 | 442 | 141 | 9 | 2 | 415 | 79 | 509 | 0.0 | 517 |
| Msa0589450 | MtrunA17_Chr2g0329201 | 58.371 | 442 | 146 | 7 | 2 | 415 | 76 | 507 | 1.75e-180 | 512 |
| Msa0589450 | MtrunA17_Chr4g0033271 | 58.465 | 443 | 146 | 7 | 2 | 416 | 80 | 512 | 5.13e-177 | 504 |
| Msa0589450 | MtrunA17_Chr4g0033191 | 57.143 | 441 | 151 | 8 | 2 | 414 | 88 | 518 | 1.57e-175 | 501 |
| Msa0589450 | MtrunA17_Chr4g0033201 | 55.756 | 443 | 158 | 6 | 2 | 416 | 81 | 513 | 2.34e-175 | 499 |
| Msa0589450 | MtrunA17_Chr3g0088441 | 58.050 | 441 | 147 | 7 | 2 | 414 | 83 | 513 | 1.67e-174 | 498 |
| Msa0589450 | MtrunA17_Chr4g0033311 | 57.596 | 441 | 149 | 7 | 2 | 414 | 84 | 514 | 3.09e-174 | 498 |
| Msa0589450 | MtrunA17_Chr6g0482131 | 55.506 | 445 | 160 | 6 | 2 | 418 | 81 | 515 | 2.21e-172 | 492 |
| Msa0589450 | MtrunA17_Chr4g0033321 | 57.500 | 440 | 149 | 7 | 2 | 413 | 78 | 507 | 3.11e-172 | 492 |
| Msa0589450 | MtrunA17_Chr4g0033401 | 57.273 | 440 | 150 | 7 | 2 | 413 | 79 | 508 | 8.30e-172 | 491 |
| Msa0589450 | MtrunA17_Chr4g0033341 | 56.009 | 441 | 158 | 8 | 2 | 416 | 114 | 544 | 2.64e-169 | 485 |
| Msa0589450 | MtrunA17_Chr6g0482071 | 56.364 | 440 | 154 | 7 | 7 | 418 | 87 | 516 | 6.76e-168 | 481 |
| Msa0589450 | MtrunA17_Chr4g0033331 | 55.455 | 440 | 158 | 6 | 2 | 413 | 84 | 513 | 1.11e-166 | 478 |
| Msa0589450 | MtrunA17_Chr6g0482081 | 54.831 | 445 | 164 | 6 | 2 | 418 | 81 | 516 | 9.54e-161 | 463 |
| Msa0589450 | MtrunA17_Chr2g0329321 | 53.741 | 441 | 140 | 9 | 2 | 414 | 83 | 487 | 7.29e-158 | 454 |
| Msa0589450 | MtrunA17_Chr4g0010501 | 51.606 | 436 | 167 | 8 | 7 | 414 | 74 | 493 | 1.38e-149 | 433 |
| Msa0589450 | MtrunA17_Chr3g0087261 | 48.513 | 437 | 185 | 6 | 4 | 413 | 84 | 507 | 5.06e-138 | 404 |
| Msa0589450 | MtrunA17_Chr5g0430451 | 50.109 | 457 | 143 | 8 | 2 | 415 | 84 | 498 | 8.60e-138 | 404 |
| Msa0589450 | MtrunA17_Chr3g0087271 | 48.292 | 439 | 187 | 8 | 2 | 413 | 83 | 508 | 2.21e-132 | 390 |
| Msa0589450 | MtrunA17_Chr4g0043091 | 45.598 | 443 | 199 | 7 | 2 | 414 | 72 | 502 | 2.83e-132 | 390 |
| Msa0589450 | MtrunA17_Chr4g0042171 | 43.596 | 445 | 206 | 8 | 2 | 414 | 68 | 499 | 1.57e-121 | 362 |
| Msa0589450 | MtrunA17_Chr4g0074561 | 42.793 | 444 | 211 | 10 | 1 | 413 | 79 | 510 | 5.93e-119 | 356 |
| Msa0589450 | MtrunA17_Chr3g0090111 | 43.155 | 431 | 214 | 7 | 2 | 414 | 63 | 480 | 3.43e-116 | 348 |
| Msa0589450 | MtrunA17_Chr3g0090131 | 42.459 | 431 | 218 | 8 | 2 | 414 | 65 | 483 | 5.46e-114 | 342 |
| Msa0589450 | MtrunA17_Chr2g0288071 | 42.438 | 443 | 218 | 8 | 2 | 417 | 112 | 544 | 2.07e-112 | 340 |
| Msa0589450 | MtrunA17_Chr2g0288021 | 40.716 | 447 | 227 | 9 | 2 | 420 | 79 | 515 | 7.04e-112 | 338 |
| Msa0589450 | MtrunA17_Chr4g0074551 | 43.537 | 441 | 212 | 8 | 4 | 417 | 96 | 526 | 9.10e-112 | 339 |
| Msa0589450 | MtrunA17_Chr2g0317841 | 41.270 | 441 | 219 | 10 | 1 | 413 | 75 | 503 | 2.89e-108 | 329 |
| Msa0589450 | MtrunA17_Chr6g0482941 | 42.058 | 447 | 211 | 12 | 1 | 417 | 86 | 514 | 6.16e-107 | 325 |
| Msa0589450 | MtrunA17_Chr2g0317821 | 40.816 | 441 | 221 | 10 | 1 | 413 | 75 | 503 | 1.14e-106 | 325 |
| Msa0589450 | MtrunA17_Chr6g0482951 | 40.315 | 444 | 223 | 10 | 1 | 417 | 86 | 514 | 5.74e-104 | 317 |
| Msa0589450 | MtrunA17_Chr4g0006971 | 40.138 | 436 | 210 | 8 | 7 | 413 | 76 | 489 | 2.19e-98 | 303 |
| Msa0589450 | MtrunA17_Chr7g0242681 | 40.046 | 437 | 210 | 9 | 7 | 414 | 87 | 500 | 1.47e-97 | 301 |
| Msa0589450 | MtrunA17_Chr7g0234131 | 41.324 | 438 | 216 | 12 | 1 | 413 | 111 | 532 | 2.59e-97 | 301 |
| Msa0589450 | MtrunA17_Chr7g0234111 | 40.984 | 427 | 215 | 8 | 12 | 416 | 123 | 534 | 8.39e-97 | 300 |
| Msa0589450 | MtrunA17_Chr7g0234091 | 40.610 | 426 | 218 | 8 | 9 | 413 | 120 | 531 | 5.43e-96 | 298 |
| Msa0589450 | MtrunA17_Chr5g0428831 | 37.557 | 442 | 226 | 7 | 5 | 417 | 72 | 492 | 6.16e-96 | 297 |
| Msa0589450 | MtrunA17_Chr1g0195611 | 37.557 | 442 | 225 | 7 | 5 | 417 | 72 | 491 | 7.04e-96 | 296 |
| Msa0589450 | MtrunA17_Chr7g0242691 | 38.215 | 437 | 221 | 8 | 7 | 415 | 80 | 495 | 5.47e-95 | 295 |
| Msa0589450 | MtrunA17_Chr3g0087201 | 46.356 | 343 | 141 | 8 | 101 | 415 | 17 | 344 | 7.73e-94 | 286 |
| Msa0589450 | MtrunA17_Chr7g0230651 | 38.874 | 373 | 182 | 7 | 4 | 352 | 18 | 368 | 3.44e-82 | 257 |
| Msa0589450 | MtrunA17_Chr5g0418871 | 46.520 | 273 | 116 | 5 | 7 | 251 | 32 | 302 | 5.90e-78 | 244 |
| Msa0589450 | MtrunA17_Chr1g0195641 | 36.963 | 349 | 176 | 5 | 5 | 325 | 72 | 404 | 9.01e-69 | 223 |
| Msa0589450 | MtrunA17_Chr7g0236731 | 44.196 | 224 | 103 | 5 | 46 | 247 | 28 | 251 | 1.51e-46 | 161 |
| Msa0589450 | MtrunA17_Chr7g0227561 | 37.327 | 217 | 91 | 3 | 4 | 201 | 93 | 283 | 5.18e-44 | 155 |
| Msa0589450 | MtrunA17_Chr3g0087191 | 66.667 | 99 | 33 | 0 | 2 | 100 | 67 | 165 | 1.05e-42 | 147 |
| Msa0589450 | MtrunA17_Chr4g0068871 | 27.465 | 426 | 210 | 13 | 21 | 418 | 183 | 537 | 3.48e-31 | 125 |
| Msa0589450 | MtrunA17_Chr5g0418861 | 51.111 | 90 | 43 | 1 | 325 | 413 | 1 | 90 | 2.75e-26 | 101 |
| Msa0589450 | MtrunA17_Chr8g0352881 | 42.697 | 89 | 50 | 1 | 162 | 249 | 62 | 150 | 6.85e-15 | 72.0 |
| Msa0589450 | MtrunA17_Chr7g0227591 | 46.429 | 56 | 30 | 0 | 361 | 416 | 13 | 68 | 6.53e-12 | 60.8 |
| Msa0589450 | MtrunA17_Chr7g0236741 | 37.931 | 58 | 36 | 0 | 361 | 418 | 10 | 67 | 7.56e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589450 | AT5G44640.1 | 47.416 | 445 | 190 | 8 | 2 | 417 | 76 | 505 | 7.55e-140 | 409 |
| Msa0589450 | AT2G44450.1 | 48.423 | 444 | 186 | 9 | 2 | 417 | 76 | 504 | 1.01e-139 | 409 |
| Msa0589450 | AT5G42260.1 | 47.597 | 437 | 185 | 8 | 2 | 409 | 76 | 497 | 2.19e-136 | 400 |
| Msa0589450 | AT2G44480.1 | 45.928 | 442 | 202 | 6 | 2 | 416 | 80 | 511 | 1.75e-133 | 394 |
| Msa0589450 | AT2G44480.3 | 45.928 | 442 | 202 | 6 | 2 | 416 | 111 | 542 | 4.89e-133 | 393 |
| Msa0589450 | AT3G60130.1 | 45.928 | 442 | 195 | 7 | 2 | 414 | 75 | 501 | 8.92e-133 | 392 |
| Msa0589450 | AT1G26560.1 | 46.380 | 442 | 196 | 9 | 2 | 413 | 76 | 506 | 1.00e-129 | 384 |
| Msa0589450 | AT5G24550.1 | 45.701 | 442 | 198 | 8 | 7 | 416 | 81 | 512 | 3.50e-128 | 380 |
| Msa0589450 | AT3G60120.1 | 45.169 | 445 | 192 | 9 | 7 | 415 | 63 | 491 | 9.29e-128 | 380 |
| Msa0589450 | AT3G60130.2 | 45.882 | 425 | 186 | 7 | 19 | 414 | 40 | 449 | 1.34e-127 | 377 |
| Msa0589450 | AT2G44490.1 | 42.729 | 447 | 216 | 7 | 2 | 417 | 59 | 496 | 2.83e-127 | 379 |
| Msa0589450 | AT2G25630.1 | 45.455 | 440 | 181 | 8 | 2 | 413 | 75 | 483 | 4.58e-127 | 376 |
| Msa0589450 | AT5G54570.1 | 44.369 | 444 | 202 | 9 | 2 | 413 | 75 | 505 | 2.30e-125 | 373 |
| Msa0589450 | AT2G44480.2 | 45.585 | 419 | 191 | 6 | 25 | 416 | 1 | 409 | 4.59e-125 | 368 |
| Msa0589450 | AT5G36890.1 | 44.676 | 432 | 209 | 7 | 2 | 414 | 60 | 480 | 2.61e-124 | 369 |
| Msa0589450 | AT5G36890.2 | 44.676 | 432 | 209 | 7 | 2 | 414 | 60 | 480 | 4.08e-124 | 369 |
| Msa0589450 | AT3G60140.1 | 46.259 | 441 | 192 | 10 | 7 | 414 | 75 | 503 | 7.95e-124 | 371 |
| Msa0589450 | AT1G51470.1 | 45.413 | 436 | 201 | 8 | 2 | 413 | 87 | 509 | 9.28e-124 | 369 |
| Msa0589450 | AT3G60130.3 | 45.047 | 424 | 180 | 7 | 19 | 414 | 40 | 438 | 1.71e-123 | 365 |
| Msa0589450 | AT1G47600.1 | 45.413 | 436 | 201 | 9 | 2 | 413 | 87 | 509 | 5.98e-123 | 366 |
| Msa0589450 | AT5G24540.1 | 45.103 | 439 | 205 | 8 | 7 | 416 | 81 | 512 | 1.19e-122 | 366 |
| Msa0589450 | AT1G47600.2 | 45.413 | 436 | 200 | 10 | 2 | 413 | 87 | 508 | 1.94e-121 | 362 |
| Msa0589450 | AT3G03640.1 | 44.191 | 439 | 205 | 7 | 7 | 414 | 84 | 513 | 4.61e-121 | 362 |
| Msa0589450 | AT5G54570.2 | 44.656 | 421 | 188 | 9 | 25 | 413 | 1 | 408 | 6.95e-118 | 351 |
| Msa0589450 | AT1G75940.1 | 42.597 | 439 | 213 | 7 | 7 | 413 | 86 | 517 | 5.52e-116 | 349 |
| Msa0589450 | AT2G44460.1 | 44.977 | 438 | 203 | 7 | 6 | 414 | 77 | 505 | 3.44e-115 | 349 |
| Msa0589450 | AT3G09260.1 | 42.009 | 438 | 216 | 6 | 7 | 415 | 84 | 512 | 2.34e-113 | 342 |
| Msa0589450 | AT3G18080.1 | 43.052 | 439 | 203 | 10 | 8 | 416 | 89 | 510 | 3.93e-113 | 341 |
| Msa0589450 | AT1G66270.1 | 43.274 | 446 | 198 | 10 | 5 | 413 | 83 | 510 | 2.78e-112 | 339 |
| Msa0589450 | AT1G66280.1 | 43.280 | 439 | 208 | 8 | 5 | 413 | 83 | 510 | 5.26e-112 | 339 |
| Msa0589450 | AT5G25980.2 | 43.182 | 440 | 210 | 12 | 4 | 414 | 95 | 523 | 2.24e-111 | 338 |
| Msa0589450 | AT2G44470.3 | 41.136 | 440 | 216 | 9 | 6 | 413 | 77 | 505 | 4.18e-111 | 338 |
| Msa0589450 | AT1G52400.3 | 41.818 | 440 | 213 | 9 | 7 | 414 | 88 | 516 | 8.07e-111 | 336 |
| Msa0589450 | AT1G52400.1 | 41.818 | 440 | 213 | 9 | 7 | 414 | 88 | 516 | 8.07e-111 | 336 |
| Msa0589450 | AT2G32860.2 | 40.535 | 449 | 226 | 9 | 2 | 419 | 139 | 577 | 9.13e-111 | 338 |
| Msa0589450 | AT2G32860.1 | 39.868 | 454 | 221 | 11 | 2 | 419 | 139 | 576 | 2.52e-110 | 337 |
| Msa0589450 | AT5G26000.1 | 42.369 | 439 | 214 | 8 | 4 | 413 | 83 | 511 | 4.03e-110 | 334 |
| Msa0589450 | AT1G66270.2 | 43.049 | 446 | 197 | 11 | 5 | 413 | 83 | 508 | 9.33e-110 | 333 |
| Msa0589450 | AT3G18070.3 | 41.928 | 446 | 204 | 12 | 2 | 417 | 74 | 494 | 1.59e-108 | 329 |
| Msa0589450 | AT3G18070.1 | 42.152 | 446 | 209 | 12 | 2 | 417 | 74 | 500 | 2.59e-108 | 328 |
| Msa0589450 | AT3G21370.1 | 41.403 | 442 | 214 | 9 | 7 | 414 | 82 | 512 | 6.73e-108 | 328 |
| Msa0589450 | AT1G61820.1 | 40.406 | 443 | 226 | 9 | 2 | 416 | 75 | 507 | 1.08e-107 | 327 |
| Msa0589450 | AT5G28510.1 | 40.225 | 445 | 221 | 8 | 4 | 413 | 85 | 519 | 2.14e-107 | 327 |
| Msa0589450 | AT4G21760.2 | 40.674 | 445 | 222 | 11 | 2 | 419 | 98 | 527 | 2.03e-106 | 325 |
| Msa0589450 | AT2G44450.2 | 45.924 | 368 | 156 | 9 | 78 | 417 | 1 | 353 | 5.31e-104 | 312 |
| Msa0589450 | AT4G21760.1 | 40.090 | 444 | 216 | 11 | 2 | 419 | 98 | 517 | 2.81e-103 | 317 |
| Msa0589450 | AT5G54570.3 | 41.538 | 390 | 184 | 8 | 2 | 360 | 75 | 451 | 5.14e-99 | 303 |
| Msa0589450 | AT1G61810.1 | 38.826 | 443 | 233 | 8 | 2 | 416 | 78 | 510 | 5.49e-98 | 303 |
| Msa0589450 | AT1G02850.2 | 39.679 | 436 | 211 | 10 | 8 | 414 | 74 | 486 | 4.14e-97 | 300 |
| Msa0589450 | AT4G27830.1 | 38.391 | 435 | 219 | 9 | 7 | 413 | 71 | 484 | 6.56e-97 | 299 |
| Msa0589450 | AT3G62750.1 | 37.529 | 429 | 229 | 9 | 4 | 413 | 65 | 473 | 1.93e-95 | 295 |
| Msa0589450 | AT5G24540.2 | 42.520 | 381 | 184 | 7 | 7 | 359 | 81 | 454 | 3.23e-95 | 293 |
| Msa0589450 | AT3G62750.2 | 37.529 | 429 | 229 | 9 | 4 | 413 | 91 | 499 | 4.15e-95 | 295 |
| Msa0589450 | AT1G02850.5 | 37.691 | 459 | 211 | 10 | 8 | 414 | 74 | 509 | 7.17e-94 | 292 |
| Msa0589450 | AT4G27820.1 | 37.671 | 438 | 225 | 9 | 4 | 413 | 65 | 482 | 2.16e-92 | 288 |
| Msa0589450 | AT1G61810.3 | 39.524 | 420 | 217 | 8 | 2 | 393 | 78 | 488 | 3.83e-92 | 288 |
| Msa0589450 | AT5G25980.3 | 41.927 | 384 | 185 | 10 | 4 | 360 | 95 | 467 | 4.18e-92 | 286 |
| Msa0589450 | AT5G25980.1 | 41.927 | 384 | 185 | 10 | 4 | 360 | 95 | 467 | 4.18e-92 | 286 |
| Msa0589450 | AT1G02850.4 | 37.609 | 460 | 211 | 11 | 8 | 414 | 74 | 510 | 5.06e-92 | 287 |
| Msa0589450 | AT1G02850.1 | 38.621 | 435 | 190 | 10 | 8 | 414 | 74 | 459 | 1.15e-90 | 282 |
| Msa0589450 | AT3G60140.2 | 45.714 | 350 | 146 | 9 | 7 | 324 | 75 | 412 | 6.15e-90 | 280 |
| Msa0589450 | AT1G61810.5 | 38.333 | 420 | 221 | 8 | 25 | 416 | 1 | 410 | 1.57e-89 | 278 |
| Msa0589450 | AT5G26000.2 | 40.625 | 384 | 191 | 6 | 4 | 360 | 83 | 456 | 2.16e-89 | 278 |
| Msa0589450 | AT4G22100.1 | 38.215 | 437 | 225 | 10 | 7 | 416 | 67 | 485 | 5.04e-89 | 279 |
| Msa0589450 | AT3G62740.1 | 36.406 | 434 | 225 | 11 | 7 | 413 | 69 | 478 | 5.22e-89 | 279 |
| Msa0589450 | AT4G27830.2 | 37.650 | 417 | 211 | 9 | 25 | 413 | 1 | 396 | 1.73e-88 | 275 |
| Msa0589450 | AT2G44470.1 | 39.221 | 385 | 192 | 8 | 6 | 359 | 77 | 450 | 2.01e-87 | 273 |
| Msa0589450 | AT1G52400.2 | 40.104 | 384 | 188 | 8 | 7 | 359 | 88 | 460 | 2.30e-85 | 268 |
| Msa0589450 | AT3G62750.6 | 36.520 | 408 | 220 | 9 | 25 | 413 | 1 | 388 | 2.71e-85 | 266 |
| Msa0589450 | AT3G62750.5 | 36.520 | 408 | 220 | 9 | 25 | 413 | 1 | 388 | 2.71e-85 | 266 |
| Msa0589450 | AT5G48375.1 | 40.933 | 386 | 169 | 11 | 4 | 378 | 74 | 411 | 1.51e-84 | 265 |
| Msa0589450 | AT1G60090.2 | 36.446 | 439 | 232 | 10 | 3 | 414 | 65 | 483 | 8.33e-84 | 265 |
| Msa0589450 | AT4G27820.2 | 36.691 | 417 | 216 | 9 | 25 | 413 | 1 | 397 | 1.94e-83 | 262 |
| Msa0589450 | AT4G27820.3 | 36.691 | 417 | 216 | 9 | 25 | 413 | 1 | 397 | 1.94e-83 | 262 |
| Msa0589450 | AT1G45191.4 | 35.862 | 435 | 228 | 8 | 7 | 414 | 74 | 484 | 4.42e-82 | 261 |
| Msa0589450 | AT1G61820.3 | 38.770 | 374 | 192 | 8 | 71 | 416 | 4 | 368 | 8.89e-82 | 256 |
| Msa0589450 | AT2G44460.2 | 42.391 | 368 | 174 | 7 | 76 | 414 | 1 | 359 | 1.09e-81 | 258 |
| Msa0589450 | AT1G60090.1 | 35.730 | 445 | 234 | 11 | 3 | 414 | 65 | 490 | 2.76e-81 | 259 |
| Msa0589450 | AT1G45191.6 | 35.632 | 435 | 240 | 8 | 7 | 414 | 74 | 495 | 2.91e-80 | 256 |
| Msa0589450 | AT1G45191.1 | 35.632 | 435 | 240 | 8 | 7 | 414 | 86 | 507 | 3.74e-80 | 257 |
| Msa0589450 | AT1G45191.2 | 35.632 | 435 | 235 | 9 | 7 | 414 | 74 | 490 | 4.24e-80 | 256 |
| Msa0589450 | AT2G44480.4 | 49.407 | 253 | 102 | 4 | 2 | 228 | 111 | 363 | 9.29e-78 | 246 |
| Msa0589450 | AT3G62750.4 | 36.340 | 377 | 202 | 8 | 4 | 362 | 91 | 447 | 1.88e-77 | 248 |
| Msa0589450 | AT2G44470.2 | 43.750 | 272 | 125 | 5 | 6 | 249 | 77 | 348 | 5.78e-75 | 239 |
| Msa0589450 | AT3G62740.2 | 36.559 | 372 | 186 | 10 | 7 | 352 | 69 | 416 | 1.02e-73 | 237 |
| Msa0589450 | AT3G18070.2 | 40.580 | 345 | 160 | 10 | 103 | 417 | 94 | 423 | 5.07e-71 | 230 |
| Msa0589450 | AT2G44480.5 | 40.767 | 287 | 157 | 4 | 133 | 416 | 29 | 305 | 3.37e-70 | 224 |
| Msa0589450 | AT3G62750.7 | 42.164 | 268 | 135 | 5 | 4 | 253 | 65 | 330 | 6.04e-70 | 225 |
| Msa0589450 | AT3G62750.8 | 42.164 | 268 | 135 | 5 | 4 | 253 | 65 | 330 | 6.04e-70 | 225 |
| Msa0589450 | AT1G02850.3 | 37.228 | 368 | 163 | 8 | 8 | 324 | 74 | 424 | 5.07e-69 | 225 |
| Msa0589450 | AT3G62750.3 | 42.164 | 268 | 135 | 5 | 4 | 253 | 91 | 356 | 5.31e-69 | 225 |
| Msa0589450 | AT1G61810.4 | 36.182 | 351 | 187 | 7 | 2 | 324 | 78 | 419 | 1.84e-66 | 218 |
| Msa0589450 | AT3G18070.7 | 43.007 | 286 | 142 | 8 | 138 | 417 | 41 | 311 | 6.61e-66 | 213 |
| Msa0589450 | AT3G18070.4 | 41.606 | 274 | 130 | 6 | 2 | 249 | 74 | 343 | 4.78e-64 | 211 |
| Msa0589450 | AT1G60270.1 | 40.502 | 279 | 137 | 5 | 7 | 259 | 70 | 345 | 2.45e-60 | 201 |
| Msa0589450 | AT1G51490.1 | 39.130 | 299 | 155 | 5 | 2 | 277 | 62 | 356 | 1.34e-59 | 200 |
| Msa0589450 | AT1G45191.5 | 38.662 | 269 | 137 | 4 | 7 | 249 | 74 | 340 | 8.21e-58 | 195 |
| Msa0589450 | AT1G45191.3 | 38.662 | 269 | 137 | 4 | 7 | 249 | 74 | 340 | 8.25e-58 | 195 |
| Msa0589450 | AT1G60270.2 | 38.434 | 281 | 136 | 7 | 25 | 278 | 1 | 271 | 5.92e-52 | 176 |
| Msa0589450 | AT1G61810.2 | 39.286 | 224 | 110 | 3 | 2 | 200 | 78 | 300 | 8.62e-48 | 166 |
| Msa0589450 | AT3G18070.5 | 37.008 | 254 | 118 | 8 | 103 | 326 | 94 | 335 | 1.77e-38 | 142 |
| Msa0589450 | AT5G16580.1 | 33.219 | 292 | 152 | 10 | 103 | 370 | 27 | 299 | 7.48e-36 | 134 |
| Msa0589450 | AT3G18070.6 | 38.500 | 200 | 105 | 6 | 133 | 326 | 36 | 223 | 1.75e-33 | 125 |
| Msa0589450 | AT3G06510.2 | 25.917 | 436 | 240 | 11 | 20 | 418 | 159 | 548 | 5.31e-33 | 131 |
| Msa0589450 | AT3G06510.1 | 25.995 | 427 | 217 | 12 | 20 | 418 | 159 | 514 | 8.37e-31 | 125 |
Find 105 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAACATAATAGAATTAT+TGG | 0.142938 | 4_2:+12337428 | Msa0589450:CDS |
| GATATATGCTTCAAGGAATT+TGG | 0.182257 | 4_2:+12335896 | Msa0589450:CDS |
| CGAGATACAAGGGGTGATTT+TGG | 0.197537 | 4_2:-12337667 | None:intergenic |
| GAGCAATCTAAGAGTCTTAT+TGG | 0.231240 | 4_2:+12336341 | Msa0589450:CDS |
| ACTGTTAATGTGACTTTAAC+AGG | 0.248704 | 4_2:+12336482 | Msa0589450:CDS |
| GGGGAAGATCCCAATGAAAA+AGG | 0.264707 | 4_2:-12335346 | None:intergenic |
| CAGGCTCAAAATGGTATAAT+AGG | 0.277472 | 4_2:+12336052 | Msa0589450:CDS |
| ACGATTATCATAACAGAAAA+TGG | 0.280720 | 4_2:+12336805 | Msa0589450:CDS |
| CAAAGCTCACACAGTATTAT+TGG | 0.283801 | 4_2:-12337473 | None:intergenic |
| ATACTTTGCATGGTCCCTTT+TGG | 0.290939 | 4_2:+12337292 | Msa0589450:CDS |
| TGTTTGTCCAAAGGGGATTC+AGG | 0.305206 | 4_2:+12336744 | Msa0589450:CDS |
| AGCTCTCTGCCCGGTGGTTT+AGG | 0.309537 | 4_2:+12337399 | Msa0589450:CDS |
| GACGGATACACTGTGCGTTT+TGG | 0.311280 | 4_2:+12337332 | Msa0589450:CDS |
| CAATAAAGAGGGGTGATTTA+AGG | 0.315275 | 4_2:+12337632 | Msa0589450:three_prime_UTR |
| TTCTTGTTTCGCTCAGATCT+TGG | 0.321062 | 4_2:+12337817 | Msa0589450:three_prime_UTR |
| GACGCCCTTGATTTCATGTT+TGG | 0.322541 | 4_2:+12336142 | Msa0589450:CDS |
| ACCACATATCAGGCTCAAAA+TGG | 0.345183 | 4_2:+12336043 | Msa0589450:CDS |
| TCTAATGGGTCAGTTGAGTA+TGG | 0.349718 | 4_2:-12336103 | None:intergenic |
| CATGAAATCAAGGGCGTCTT+CGG | 0.355937 | 4_2:-12336137 | None:intergenic |
| TGATCACTATCATCGTTATA+AGG | 0.379609 | 4_2:+12334760 | Msa0589450:CDS |
| CAATATCCTTGGCCAAGATA+TGG | 0.382965 | 4_2:-12335041 | None:intergenic |
| GATCCAGACTGTATAGGAAT+TGG | 0.386737 | 4_2:-12336425 | None:intergenic |
| AGGCAAGGTGTGAATGTAAA+AGG | 0.387936 | 4_2:+12337269 | Msa0589450:intron |
| CTATTACTTGGCAATATCCT+TGG | 0.390771 | 4_2:-12335052 | None:intergenic |
| TCCATTCAAAGTTGTCCAAA+AGG | 0.405927 | 4_2:-12337307 | None:intergenic |
| TGGCTATATGTTTGTCCAAA+GGG | 0.410402 | 4_2:+12336736 | Msa0589450:CDS |
| CATACAGATTCTCCATATCT+TGG | 0.418726 | 4_2:+12335029 | Msa0589450:CDS |
| TTTATACAGCCGCTAACAAC+AGG | 0.426920 | 4_2:+12336263 | Msa0589450:CDS |
| ATACTCATCTTGTAAGGCCT+GGG | 0.427696 | 4_2:-12335366 | None:intergenic |
| ATCAATGAGCTACTTGCTAA+TGG | 0.429019 | 4_2:+12335215 | Msa0589450:CDS |
| CAGGCCTTACAAGATGAGTA+TGG | 0.435383 | 4_2:+12335368 | Msa0589450:CDS |
| ATTGTATAAAACCACATATC+AGG | 0.437772 | 4_2:+12336033 | Msa0589450:CDS |
| ACATAAGACACCAAGCTTGC+TGG | 0.447607 | 4_2:-12336293 | None:intergenic |
| GCAGTGAACGTTGGTAAATC+CGG | 0.447948 | 4_2:-12336317 | None:intergenic |
| AACCACCGGGCAGAGAGCTT+AGG | 0.450563 | 4_2:-12337395 | None:intergenic |
| CATACTCATCTTGTAAGGCC+TGG | 0.455210 | 4_2:-12335367 | None:intergenic |
| CTTCTTCTTCATCAATAAAG+AGG | 0.457465 | 4_2:+12337620 | Msa0589450:three_prime_UTR |
| ATGACAGATAAGAATAAAGA+TGG | 0.458312 | 4_2:+12336615 | Msa0589450:intron |
| CCGCCTGATCCAGACTGTAT+AGG | 0.458956 | 4_2:-12336431 | None:intergenic |
| TAGCAAGTAGCTCATTGATC+AGG | 0.461889 | 4_2:-12335211 | None:intergenic |
| ACACTTTGAATACATCAGAT+TGG | 0.462336 | 4_2:+12335963 | Msa0589450:CDS |
| ACCATCCAAACATGAAATCA+AGG | 0.473106 | 4_2:-12336147 | None:intergenic |
| CTTCGTGGATATATGCTTCA+AGG | 0.473903 | 4_2:+12335889 | Msa0589450:CDS |
| TTCATTGACTGAATCTGCAT+TGG | 0.473903 | 4_2:-12337870 | None:intergenic |
| ACCACCGGGCAGAGAGCTTA+GGG | 0.475465 | 4_2:-12337394 | None:intergenic |
| ATCACTCGAAGAGGCGCTCA+TGG | 0.478154 | 4_2:+12337074 | Msa0589450:CDS |
| TTGGAGACAGAGTAAAGCAT+TGG | 0.480355 | 4_2:+12335915 | Msa0589450:CDS |
| AATAAAGATGGGACATACAT+TGG | 0.483048 | 4_2:+12336627 | Msa0589450:CDS |
| ATTCCTATACAGTCTGGATC+AGG | 0.483543 | 4_2:+12336428 | Msa0589450:CDS |
| TAATTGGTGTAACTGCATAC+AGG | 0.483738 | 4_2:+12334701 | Msa0589450:five_prime_UTR |
| AGTAGGTCCTGAATCCCCTT+TGG | 0.484753 | 4_2:-12336751 | None:intergenic |
| CAAAATGGTATAATAGGCAT+TGG | 0.486147 | 4_2:+12336058 | Msa0589450:CDS |
| GCATTGGATTAAACTCTCAC+TGG | 0.490284 | 4_2:+12336074 | Msa0589450:CDS |
| AGCAATCTAAGAGTCTTATT+GGG | 0.490733 | 4_2:+12336342 | Msa0589450:CDS |
| GCCTCCATACTCATCTTGTA+AGG | 0.497866 | 4_2:-12335372 | None:intergenic |
| CCATTCAAAGTTGTCCAAAA+GGG | 0.499789 | 4_2:-12337306 | None:intergenic |
| AAGCTTGGTGTCTTATGTGC+CGG | 0.501730 | 4_2:+12336298 | Msa0589450:CDS |
| TTCTTCTTCATCAATAAAGA+GGG | 0.501801 | 4_2:+12337621 | Msa0589450:three_prime_UTR |
| CCCTTGATTTCATGTTTGGA+TGG | 0.504970 | 4_2:+12336146 | Msa0589450:CDS |
| TGGAGACAGAGTAAAGCATT+GGG | 0.508305 | 4_2:+12335916 | Msa0589450:CDS |
| TCTGGATCAGGCGGCGCTGA+CGG | 0.508743 | 4_2:+12336440 | Msa0589450:CDS |
| CAGCTGCATGAGCAAGAAGT+TGG | 0.509222 | 4_2:-12336003 | None:intergenic |
| AGGAATTGGTTTCGTTGCAT+TGG | 0.510612 | 4_2:-12336411 | None:intergenic |
| AAACCAATTCCTATACAGTC+TGG | 0.511299 | 4_2:+12336422 | Msa0589450:CDS |
| AGGAAAGTATCCAGCAAGCT+TGG | 0.526086 | 4_2:+12336283 | Msa0589450:CDS |
| GACAACTTTGAATGGAATGA+CGG | 0.527539 | 4_2:+12337314 | Msa0589450:CDS |
| GGATACTTTCCTGTTGTTAG+CGG | 0.535598 | 4_2:-12336272 | None:intergenic |
| GAAGTTGGTTGTGTGTGGCC+TGG | 0.537777 | 4_2:-12335988 | None:intergenic |
| AGATCTGAGCGAAACAAGAA+AGG | 0.538969 | 4_2:-12337814 | None:intergenic |
| AATATGTGCAGGCTGCAACT+TGG | 0.539391 | 4_2:+12336716 | Msa0589450:intron |
| CAAGAAACTTCCTAAACCAC+CGG | 0.545200 | 4_2:-12337409 | None:intergenic |
| TTGGCTATATGTTTGTCCAA+AGG | 0.547740 | 4_2:+12336735 | Msa0589450:CDS |
| TTTCCTTTGTGTACAACAGT+AGG | 0.554600 | 4_2:-12336768 | None:intergenic |
| GTATTCAAAGTGTAAGAGAA+TGG | 0.570526 | 4_2:-12335953 | None:intergenic |
| GATTCTCCATATCTTGGCCA+AGG | 0.571513 | 4_2:+12335035 | Msa0589450:CDS |
| GACACCCTAAGCTCTCTGCC+CGG | 0.573913 | 4_2:+12337390 | Msa0589450:CDS |
| ACTGCATACAGGGATGGTAA+AGG | 0.575949 | 4_2:+12334712 | Msa0589450:exon |
| TGGGACATACATTGGAGCAT+GGG | 0.581493 | 4_2:+12336635 | Msa0589450:CDS |
| ATGGGACATACATTGGAGCA+TGG | 0.582897 | 4_2:+12336634 | Msa0589450:CDS |
| TGTAAAATATGATTCCTGCT+TGG | 0.587277 | 4_2:-12335184 | None:intergenic |
| GAATACATCAGATTGGTACC+AGG | 0.597455 | 4_2:+12335970 | Msa0589450:CDS |
| GATTGCTCTGCAGTGAACGT+TGG | 0.602380 | 4_2:-12336326 | None:intergenic |
| GGCTATATGTTTGTCCAAAG+GGG | 0.602874 | 4_2:+12336737 | Msa0589450:CDS |
| AGCTCACACAGTATTATTGG+TGG | 0.605868 | 4_2:-12337470 | None:intergenic |
| CATACAGGGATGGTAAAGGA+TGG | 0.607856 | 4_2:+12334716 | Msa0589450:exon |
| TGACAGATAAGAATAAAGAT+GGG | 0.612129 | 4_2:+12336616 | Msa0589450:intron |
| AATTGGTGTAACTGCATACA+GGG | 0.620404 | 4_2:+12334702 | Msa0589450:five_prime_UTR |
| ATGTAAAAGGATACTTTGCA+TGG | 0.622027 | 4_2:+12337282 | Msa0589450:CDS |
| AGTGGCGGTGTAAACCAAGC+AGG | 0.626808 | 4_2:+12335170 | Msa0589450:CDS |
| TCTTCTTCATCAATAAAGAG+GGG | 0.629116 | 4_2:+12337622 | Msa0589450:three_prime_UTR |
| GGTGTAACTGCATACAGGGA+TGG | 0.631977 | 4_2:+12334706 | Msa0589450:exon |
| GTGTGTTTGTCGCATTTGTG+TGG | 0.633380 | 4_2:+12337782 | Msa0589450:three_prime_UTR |
| AGCAAGAAGTTGGTTGTGTG+TGG | 0.636210 | 4_2:-12335993 | None:intergenic |
| CCATCCAAACATGAAATCAA+GGG | 0.640294 | 4_2:-12336146 | None:intergenic |
| TACTCATCTTGTAAGGCCTG+GGG | 0.645812 | 4_2:-12335365 | None:intergenic |
| TGCATTGGCAGCATACATGC+TGG | 0.650774 | 4_2:-12336396 | None:intergenic |
| CCTATACAGTCTGGATCAGG+CGG | 0.652705 | 4_2:+12336431 | Msa0589450:CDS |
| TATGCAGAAGGAAAACTAAG+TGG | 0.653344 | 4_2:+12335152 | Msa0589450:intron |
| TCCTACACTATCACTCGAAG+AGG | 0.658030 | 4_2:+12337065 | Msa0589450:CDS |
| GGACCTACTGTTGTACACAA+AGG | 0.659998 | 4_2:+12336765 | Msa0589450:CDS |
| AAGAAACTTCCTAAACCACC+GGG | 0.661886 | 4_2:-12337408 | None:intergenic |
| ACCCTAAGCTCTCTGCCCGG+TGG | 0.683098 | 4_2:+12337393 | Msa0589450:CDS |
| GCAGAAGGAAAACTAAGTGG+CGG | 0.686824 | 4_2:+12335155 | Msa0589450:intron |
| GCCTTACAAGATGAGTATGG+AGG | 0.687554 | 4_2:+12335371 | Msa0589450:CDS |
| GCCTCTTCGAGTGATAGTGT+AGG | 0.709813 | 4_2:-12337066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGATTTCAAATTATA+CGG | - | chr4_2:12336230-12336249 | None:intergenic | 10.0% |
| !! | TTCTAATAAATTTAAATCAT+AGG | + | chr4_2:12337024-12337043 | Msa0589450:intron | 10.0% |
| !!! | CACTTATTTTAATAAAAAAA+AGG | - | chr4_2:12337704-12337723 | None:intergenic | 10.0% |
| !!! | AAATAATTTTAGTGATCAAA+AGG | + | chr4_2:12334866-12334885 | Msa0589450:intron | 15.0% |
| !!! | ATTAAACATTTTCTATTACT+TGG | - | chr4_2:12335067-12335086 | None:intergenic | 15.0% |
| !! | GTAATAGAAAATGTTTAATT+TGG | + | chr4_2:12335068-12335087 | Msa0589450:intron | 15.0% |
| !! | TATGATATACTAATAAAGTA+TGG | - | chr4_2:12335255-12335274 | None:intergenic | 15.0% |
| !! | TTCATAATAATACAAATTGA+TGG | + | chr4_2:12335290-12335309 | Msa0589450:intron | 15.0% |
| !! | ATTCAAGAAATAATAAATTG+AGG | + | chr4_2:12335791-12335810 | Msa0589450:intron | 15.0% |
| !!! | AACCATTTTTACATCTTAAT+AGG | + | chr4_2:12334970-12334989 | Msa0589450:intron | 20.0% |
| !! | TTCCTATTAAGATGTAAAAA+TGG | - | chr4_2:12334975-12334994 | None:intergenic | 20.0% |
| !!! | AATCTTTTTTATCTGTTTAC+AGG | + | chr4_2:12336240-12336259 | Msa0589450:intron | 20.0% |
| !! | AAAACAATTTATGTCAAACA+AGG | - | chr4_2:12336583-12336602 | None:intergenic | 20.0% |
| !! | TTCTGATTTAAGTAAATAGA+GGG | - | chr4_2:12337164-12337183 | None:intergenic | 20.0% |
| !! | ATTCTGATTTAAGTAAATAG+AGG | - | chr4_2:12337165-12337184 | None:intergenic | 20.0% |
| !!! | TTGACTATATTGTTGTTTTT+TGG | + | chr4_2:12337234-12337253 | Msa0589450:intron | 20.0% |
| !! | CTTGAACATAATAGAATTAT+TGG | + | chr4_2:12337428-12337447 | Msa0589450:CDS | 20.0% |
| ! | GAAATGATATATCACATTAG+AGG | - | chr4_2:12334788-12334807 | None:intergenic | 25.0% |
| !! | AGAGAAAGATTAGAATGTTT+TGG | + | chr4_2:12335462-12335481 | Msa0589450:intron | 25.0% |
| ! | TAACTAACTAGTTAGTTAGT+TGG | - | chr4_2:12335689-12335708 | None:intergenic | 25.0% |
| ! | ATTCTAATGTTAGTTAGTTG+TGG | - | chr4_2:12335745-12335764 | None:intergenic | 25.0% |
| !! | TATATGCAGAGATGATTTTA+AGG | + | chr4_2:12335865-12335884 | Msa0589450:intron | 25.0% |
| ! | ATTGTATAAAACCACATATC+AGG | + | chr4_2:12336033-12336052 | Msa0589450:CDS | 25.0% |
| !! | ATTGGGTCATATGATTTTAT+TGG | + | chr4_2:12336359-12336378 | Msa0589450:CDS | 25.0% |
| !! | GTTTGACATAAATTGTTTTC+TGG | + | chr4_2:12336584-12336603 | Msa0589450:intron | 25.0% |
| ! | ATGACAGATAAGAATAAAGA+TGG | + | chr4_2:12336615-12336634 | Msa0589450:intron | 25.0% |
| ! | TGACAGATAAGAATAAAGAT+GGG | + | chr4_2:12336616-12336635 | Msa0589450:intron | 25.0% |
| ! | AATAACTAAACAATATGTGC+AGG | + | chr4_2:12336705-12336724 | Msa0589450:intron | 25.0% |
| !! | TTTTCTGTTATGATAATCGT+AGG | - | chr4_2:12336805-12336824 | None:intergenic | 25.0% |
| ! | ACGATTATCATAACAGAAAA+TGG | + | chr4_2:12336805-12336824 | Msa0589450:CDS | 25.0% |
| ! | GTTTATTAGACACTGAAAAA+AGG | - | chr4_2:12336991-12337010 | None:intergenic | 25.0% |
| !! | ATTATCTTTTATCTGCAATG+AGG | + | chr4_2:12337133-12337152 | Msa0589450:CDS | 25.0% |
| !!! | TTTTTTGGTTTTTTGTGTGA+AGG | + | chr4_2:12337249-12337268 | Msa0589450:intron | 25.0% |
| ! | TTCTTCTTCATCAATAAAGA+GGG | + | chr4_2:12337621-12337640 | Msa0589450:three_prime_UTR | 25.0% |
| TGATCACTATCATCGTTATA+AGG | + | chr4_2:12334760-12334779 | Msa0589450:CDS | 30.0% | |
| GTTAGAGTTGTTAATGCATA+TGG | - | chr4_2:12335129-12335148 | None:intergenic | 30.0% | |
| AACTCTAACAAATATGCAGA+AGG | + | chr4_2:12335140-12335159 | Msa0589450:intron | 30.0% | |
| TGTAAAATATGATTCCTGCT+TGG | - | chr4_2:12335187-12335206 | None:intergenic | 30.0% | |
| ATTGATGGAATTATTGATCC+AGG | + | chr4_2:12335305-12335324 | Msa0589450:intron | 30.0% | |
| !! | ATATGTGACCCTTTTTCATT+GGG | + | chr4_2:12335337-12335356 | Msa0589450:CDS | 30.0% |
| ! | CTTTAGAGAGAAAACTACAA+AGG | + | chr4_2:12335536-12335555 | Msa0589450:intron | 30.0% |
| AAATCAACTATGTTGTTGGT+TGG | - | chr4_2:12335720-12335739 | None:intergenic | 30.0% | |
| GGATAAATCAACTATGTTGT+TGG | - | chr4_2:12335724-12335743 | None:intergenic | 30.0% | |
| GATATATGCTTCAAGGAATT+TGG | + | chr4_2:12335896-12335915 | Msa0589450:CDS | 30.0% | |
| GTATTCAAAGTGTAAGAGAA+TGG | - | chr4_2:12335956-12335975 | None:intergenic | 30.0% | |
| ACACTTTGAATACATCAGAT+TGG | + | chr4_2:12335963-12335982 | Msa0589450:CDS | 30.0% | |
| CAAAATGGTATAATAGGCAT+TGG | + | chr4_2:12336058-12336077 | Msa0589450:CDS | 30.0% | |
| !! | AGCAATCTAAGAGTCTTATT+GGG | + | chr4_2:12336342-12336361 | Msa0589450:CDS | 30.0% |
| ACTGTTAATGTGACTTTAAC+AGG | + | chr4_2:12336482-12336501 | Msa0589450:CDS | 30.0% | |
| AATAAAGATGGGACATACAT+TGG | + | chr4_2:12336627-12336646 | Msa0589450:CDS | 30.0% | |
| ATGTAAAAGGATACTTTGCA+TGG | + | chr4_2:12337282-12337301 | Msa0589450:CDS | 30.0% | |
| CTTCTTCTTCATCAATAAAG+AGG | + | chr4_2:12337620-12337639 | Msa0589450:three_prime_UTR | 30.0% | |
| TCTTCTTCATCAATAAAGAG+GGG | + | chr4_2:12337622-12337641 | Msa0589450:three_prime_UTR | 30.0% | |
| AAGAGAAAAACGAGATACAA+GGG | - | chr4_2:12337680-12337699 | None:intergenic | 30.0% | |
| AAAGAGAAAAACGAGATACA+AGG | - | chr4_2:12337681-12337700 | None:intergenic | 30.0% | |
| TAATTGGTGTAACTGCATAC+AGG | + | chr4_2:12334701-12334720 | Msa0589450:five_prime_UTR | 35.0% | |
| AATTGGTGTAACTGCATACA+GGG | + | chr4_2:12334702-12334721 | Msa0589450:five_prime_UTR | 35.0% | |
| CATACAGATTCTCCATATCT+TGG | + | chr4_2:12335029-12335048 | Msa0589450:CDS | 35.0% | |
| CTATTACTTGGCAATATCCT+TGG | - | chr4_2:12335055-12335074 | None:intergenic | 35.0% | |
| TATGCAGAAGGAAAACTAAG+TGG | + | chr4_2:12335152-12335171 | Msa0589450:intron | 35.0% | |
| ! | ATCAATGAGCTACTTGCTAA+TGG | + | chr4_2:12335215-12335234 | Msa0589450:CDS | 35.0% |
| CAATGAAAAAGGGTCACATA+TGG | - | chr4_2:12335338-12335357 | None:intergenic | 35.0% | |
| !! | CATATGTGACCCTTTTTCAT+TGG | + | chr4_2:12335336-12335355 | Msa0589450:CDS | 35.0% |
| CTAGTTAGTTAGTTGGTTAG+TGG | - | chr4_2:12335682-12335701 | None:intergenic | 35.0% | |
| !! | AGATGATTTTAAGGACTTCG+TGG | + | chr4_2:12335874-12335893 | Msa0589450:CDS | 35.0% |
| CAGGCTCAAAATGGTATAAT+AGG | + | chr4_2:12336052-12336071 | Msa0589450:CDS | 35.0% | |
| CCATCCAAACATGAAATCAA+GGG | - | chr4_2:12336149-12336168 | None:intergenic | 35.0% | |
| ACCATCCAAACATGAAATCA+AGG | - | chr4_2:12336150-12336169 | None:intergenic | 35.0% | |
| ! | GAAACGGTCAAAAAGTATAG+TGG | - | chr4_2:12336175-12336194 | None:intergenic | 35.0% |
| ATCCATGGTTGTTGTAGAAA+CGG | - | chr4_2:12336191-12336210 | None:intergenic | 35.0% | |
| ! | GAGCAATCTAAGAGTCTTAT+TGG | + | chr4_2:12336341-12336360 | Msa0589450:CDS | 35.0% |
| AAACCAATTCCTATACAGTC+TGG | + | chr4_2:12336422-12336441 | Msa0589450:CDS | 35.0% | |
| TTCATTAGGAGTGGTAAGAA+AGG | - | chr4_2:12336516-12336535 | None:intergenic | 35.0% | |
| TGATGTATGCCATCTTCATT+AGG | - | chr4_2:12336530-12336549 | None:intergenic | 35.0% | |
| TTGGCTATATGTTTGTCCAA+AGG | + | chr4_2:12336735-12336754 | Msa0589450:CDS | 35.0% | |
| TGGCTATATGTTTGTCCAAA+GGG | + | chr4_2:12336736-12336755 | Msa0589450:CDS | 35.0% | |
| TTTCCTTTGTGTACAACAGT+AGG | - | chr4_2:12336771-12336790 | None:intergenic | 35.0% | |
| CCATTCAAAGTTGTCCAAAA+GGG | - | chr4_2:12337309-12337328 | None:intergenic | 35.0% | |
| TCCATTCAAAGTTGTCCAAA+AGG | - | chr4_2:12337310-12337329 | None:intergenic | 35.0% | |
| GACAACTTTGAATGGAATGA+CGG | + | chr4_2:12337314-12337333 | Msa0589450:CDS | 35.0% | |
| CAAAGCTCACACAGTATTAT+TGG | - | chr4_2:12337476-12337495 | None:intergenic | 35.0% | |
| ! | AGAAACTAGAGTTTTGCTGA+CGG | - | chr4_2:12337602-12337621 | None:intergenic | 35.0% |
| CAATAAAGAGGGGTGATTTA+AGG | + | chr4_2:12337632-12337651 | Msa0589450:three_prime_UTR | 35.0% | |
| AGAGAAAAACGAGATACAAG+GGG | - | chr4_2:12337679-12337698 | None:intergenic | 35.0% | |
| ! | TTCATTGACTGAATCTGCAT+TGG | - | chr4_2:12337873-12337892 | None:intergenic | 35.0% |
| CAATATCCTTGGCCAAGATA+TGG | - | chr4_2:12335044-12335063 | None:intergenic | 40.0% | |
| TAGCAAGTAGCTCATTGATC+AGG | - | chr4_2:12335214-12335233 | None:intergenic | 40.0% | |
| GTCACATATGGTATTTGACC+TGG | - | chr4_2:12335326-12335345 | None:intergenic | 40.0% | |
| GGGAAGATCCCAATGAAAAA+GGG | - | chr4_2:12335348-12335367 | None:intergenic | 40.0% | |
| ATACTCATCTTGTAAGGCCT+GGG | - | chr4_2:12335369-12335388 | None:intergenic | 40.0% | |
| !! | CTCTCTAAAGTGTGAGTGTA+TGG | - | chr4_2:12335526-12335545 | None:intergenic | 40.0% |
| CTTCGTGGATATATGCTTCA+AGG | + | chr4_2:12335889-12335908 | Msa0589450:CDS | 40.0% | |
| TTGGAGACAGAGTAAAGCAT+TGG | + | chr4_2:12335915-12335934 | Msa0589450:CDS | 40.0% | |
| ! | TGGAGACAGAGTAAAGCATT+GGG | + | chr4_2:12335916-12335935 | Msa0589450:CDS | 40.0% |
| GAATACATCAGATTGGTACC+AGG | + | chr4_2:12335970-12335989 | Msa0589450:CDS | 40.0% | |
| ACCACATATCAGGCTCAAAA+TGG | + | chr4_2:12336043-12336062 | Msa0589450:CDS | 40.0% | |
| ! | ACCATTTTGAGCCTGATATG+TGG | - | chr4_2:12336047-12336066 | None:intergenic | 40.0% |
| GCATTGGATTAAACTCTCAC+TGG | + | chr4_2:12336074-12336093 | Msa0589450:CDS | 40.0% | |
| ! | TCTAATGGGTCAGTTGAGTA+TGG | - | chr4_2:12336106-12336125 | None:intergenic | 40.0% |
| ! | CGGCAGCTTTTAGATCTAAT+GGG | - | chr4_2:12336120-12336139 | None:intergenic | 40.0% |
| ! | TCGGCAGCTTTTAGATCTAA+TGG | - | chr4_2:12336121-12336140 | None:intergenic | 40.0% |
| CCCTTGATTTCATGTTTGGA+TGG | + | chr4_2:12336146-12336165 | Msa0589450:CDS | 40.0% | |
| ACCATGGATCACGACAAAAT+TGG | + | chr4_2:12336202-12336221 | Msa0589450:intron | 40.0% | |
| CCATGGATCACGACAAAATT+GGG | + | chr4_2:12336203-12336222 | Msa0589450:intron | 40.0% | |
| TTTATACAGCCGCTAACAAC+AGG | + | chr4_2:12336263-12336282 | Msa0589450:CDS | 40.0% | |
| GGATACTTTCCTGTTGTTAG+CGG | - | chr4_2:12336275-12336294 | None:intergenic | 40.0% | |
| ! | AGGAATTGGTTTCGTTGCAT+TGG | - | chr4_2:12336414-12336433 | None:intergenic | 40.0% |
| GATCCAGACTGTATAGGAAT+TGG | - | chr4_2:12336428-12336447 | None:intergenic | 40.0% | |
| ATTCCTATACAGTCTGGATC+AGG | + | chr4_2:12336428-12336447 | Msa0589450:CDS | 40.0% | |
| CTTACCACTCCTAATGAAGA+TGG | + | chr4_2:12336518-12336537 | Msa0589450:intron | 40.0% | |
| TATGCCATCTTCATTAGGAG+TGG | - | chr4_2:12336525-12336544 | None:intergenic | 40.0% | |
| GGCTATATGTTTGTCCAAAG+GGG | + | chr4_2:12336737-12336756 | Msa0589450:CDS | 40.0% | |
| !!! | TGGTTTTTTGTGTGAAGGCA+AGG | + | chr4_2:12337254-12337273 | Msa0589450:intron | 40.0% |
| AGGCAAGGTGTGAATGTAAA+AGG | + | chr4_2:12337269-12337288 | Msa0589450:intron | 40.0% | |
| ! | ATACTTTGCATGGTCCCTTT+TGG | + | chr4_2:12337292-12337311 | Msa0589450:CDS | 40.0% |
| ! | CCCTTTTGGACAACTTTGAA+TGG | + | chr4_2:12337306-12337325 | Msa0589450:CDS | 40.0% |
| AAGAAACTTCCTAAACCACC+GGG | - | chr4_2:12337411-12337430 | None:intergenic | 40.0% | |
| CAAGAAACTTCCTAAACCAC+CGG | - | chr4_2:12337412-12337431 | None:intergenic | 40.0% | |
| AGCTCACACAGTATTATTGG+TGG | - | chr4_2:12337473-12337492 | None:intergenic | 40.0% | |
| AGATCTGAGCGAAACAAGAA+AGG | - | chr4_2:12337817-12337836 | None:intergenic | 40.0% | |
| ! | TTCTTGTTTCGCTCAGATCT+TGG | + | chr4_2:12337817-12337836 | Msa0589450:three_prime_UTR | 40.0% |
| ACTGCATACAGGGATGGTAA+AGG | + | chr4_2:12334712-12334731 | Msa0589450:exon | 45.0% | |
| CATACAGGGATGGTAAAGGA+TGG | + | chr4_2:12334716-12334735 | Msa0589450:exon | 45.0% | |
| GATTCTCCATATCTTGGCCA+AGG | + | chr4_2:12335035-12335054 | Msa0589450:CDS | 45.0% | |
| GCAGAAGGAAAACTAAGTGG+CGG | + | chr4_2:12335155-12335174 | Msa0589450:intron | 45.0% | |
| GGGGAAGATCCCAATGAAAA+AGG | - | chr4_2:12335349-12335368 | None:intergenic | 45.0% | |
| ! | TTTTCATTGGGATCTTCCCC+AGG | + | chr4_2:12335349-12335368 | Msa0589450:CDS | 45.0% |
| TACTCATCTTGTAAGGCCTG+GGG | - | chr4_2:12335368-12335387 | None:intergenic | 45.0% | |
| CATACTCATCTTGTAAGGCC+TGG | - | chr4_2:12335370-12335389 | None:intergenic | 45.0% | |
| CAGGCCTTACAAGATGAGTA+TGG | + | chr4_2:12335368-12335387 | Msa0589450:CDS | 45.0% | |
| GCCTTACAAGATGAGTATGG+AGG | + | chr4_2:12335371-12335390 | Msa0589450:CDS | 45.0% | |
| GCCTCCATACTCATCTTGTA+AGG | - | chr4_2:12335375-12335394 | None:intergenic | 45.0% | |
| ! | AGCAAGAAGTTGGTTGTGTG+TGG | - | chr4_2:12335996-12336015 | None:intergenic | 45.0% |
| !! | CATGAAATCAAGGGCGTCTT+CGG | - | chr4_2:12336140-12336159 | None:intergenic | 45.0% |
| GACGCCCTTGATTTCATGTT+TGG | + | chr4_2:12336142-12336161 | Msa0589450:CDS | 45.0% | |
| GACCGTTTCTACAACAACCA+TGG | + | chr4_2:12336186-12336205 | Msa0589450:intron | 45.0% | |
| ! | CCCAATTTTGTCGTGATCCA+TGG | - | chr4_2:12336206-12336225 | None:intergenic | 45.0% |
| !! | AGGAAAGTATCCAGCAAGCT+TGG | + | chr4_2:12336283-12336302 | Msa0589450:CDS | 45.0% |
| ACATAAGACACCAAGCTTGC+TGG | - | chr4_2:12336296-12336315 | None:intergenic | 45.0% | |
| !! | AAGCTTGGTGTCTTATGTGC+CGG | + | chr4_2:12336298-12336317 | Msa0589450:CDS | 45.0% |
| ! | GCAGTGAACGTTGGTAAATC+CGG | - | chr4_2:12336320-12336339 | None:intergenic | 45.0% |
| ATGGGACATACATTGGAGCA+TGG | + | chr4_2:12336634-12336653 | Msa0589450:CDS | 45.0% | |
| TGGGACATACATTGGAGCAT+GGG | + | chr4_2:12336635-12336654 | Msa0589450:CDS | 45.0% | |
| AATATGTGCAGGCTGCAACT+TGG | + | chr4_2:12336716-12336735 | Msa0589450:intron | 45.0% | |
| TGTTTGTCCAAAGGGGATTC+AGG | + | chr4_2:12336744-12336763 | Msa0589450:CDS | 45.0% | |
| GGACCTACTGTTGTACACAA+AGG | + | chr4_2:12336765-12336784 | Msa0589450:CDS | 45.0% | |
| TCCTACACTATCACTCGAAG+AGG | + | chr4_2:12337065-12337084 | Msa0589450:CDS | 45.0% | |
| ! | CGAGATACAAGGGGTGATTT+TGG | - | chr4_2:12337670-12337689 | None:intergenic | 45.0% |
| GTGTGTTTGTCGCATTTGTG+TGG | + | chr4_2:12337782-12337801 | Msa0589450:three_prime_UTR | 45.0% | |
| !!! | AAAATTATTTGATTTTTTTA+AGG | - | chr4_2:12334856-12334875 | None:intergenic | 5.0% |
| GGTGTAACTGCATACAGGGA+TGG | + | chr4_2:12334706-12334725 | Msa0589450:exon | 50.0% | |
| CAGCTGCATGAGCAAGAAGT+TGG | - | chr4_2:12336006-12336025 | None:intergenic | 50.0% | |
| GATTGCTCTGCAGTGAACGT+TGG | - | chr4_2:12336329-12336348 | None:intergenic | 50.0% | |
| ! | TGCATTGGCAGCATACATGC+TGG | - | chr4_2:12336399-12336418 | None:intergenic | 50.0% |
| CCTATACAGTCTGGATCAGG+CGG | + | chr4_2:12336431-12336450 | Msa0589450:CDS | 50.0% | |
| AGTAGGTCCTGAATCCCCTT+TGG | - | chr4_2:12336754-12336773 | None:intergenic | 50.0% | |
| ! | GCCTCTTCGAGTGATAGTGT+AGG | - | chr4_2:12337069-12337088 | None:intergenic | 50.0% |
| ! | GACGGATACACTGTGCGTTT+TGG | + | chr4_2:12337332-12337351 | Msa0589450:CDS | 50.0% |
| AGTGGCGGTGTAAACCAAGC+AGG | + | chr4_2:12335170-12335189 | Msa0589450:CDS | 55.0% | |
| ! | GAAGTTGGTTGTGTGTGGCC+TGG | - | chr4_2:12335991-12336010 | None:intergenic | 55.0% |
| CCGCCTGATCCAGACTGTAT+AGG | - | chr4_2:12336434-12336453 | None:intergenic | 55.0% | |
| !! | ATCACTCGAAGAGGCGCTCA+TGG | + | chr4_2:12337074-12337093 | Msa0589450:CDS | 55.0% |
| GACACCCTAAGCTCTCTGCC+CGG | + | chr4_2:12337390-12337409 | Msa0589450:CDS | 60.0% | |
| ACCACCGGGCAGAGAGCTTA+GGG | - | chr4_2:12337397-12337416 | None:intergenic | 60.0% | |
| AACCACCGGGCAGAGAGCTT+AGG | - | chr4_2:12337398-12337417 | None:intergenic | 60.0% | |
| AGCTCTCTGCCCGGTGGTTT+AGG | + | chr4_2:12337399-12337418 | Msa0589450:CDS | 60.0% | |
| ! | TCTGGATCAGGCGGCGCTGA+CGG | + | chr4_2:12336440-12336459 | Msa0589450:CDS | 65.0% |
| ACCCTAAGCTCTCTGCCCGG+TGG | + | chr4_2:12337393-12337412 | Msa0589450:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 12334694 | 12337904 | 12334694 | ID=Msa0589450;Name=Msa0589450 |
| chr4_2 | mRNA | 12334694 | 12337904 | 12334694 | ID=Msa0589450-mRNA-1;Parent=Msa0589450;Name=Msa0589450-mRNA-1;_AED=0.13;_eAED=0.13;_QI=31|1|1|1|1|1|10|450|420 |
| chr4_2 | exon | 12334694 | 12334781 | 12334694 | ID=Msa0589450-mRNA-1:exon:3604;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12334992 | 12335067 | 12334992 | ID=Msa0589450-mRNA-1:exon:3605;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12335159 | 12335236 | 12335159 | ID=Msa0589450-mRNA-1:exon:3606;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12335327 | 12335414 | 12335327 | ID=Msa0589450-mRNA-1:exon:3607;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12335874 | 12336167 | 12335874 | ID=Msa0589450-mRNA-1:exon:3608;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12336262 | 12336503 | 12336262 | ID=Msa0589450-mRNA-1:exon:3609;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12336622 | 12336656 | 12336622 | ID=Msa0589450-mRNA-1:exon:3610;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12336727 | 12336826 | 12336727 | ID=Msa0589450-mRNA-1:exon:3611;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12337046 | 12337154 | 12337046 | ID=Msa0589450-mRNA-1:exon:3612;Parent=Msa0589450-mRNA-1 |
| chr4_2 | exon | 12337271 | 12337904 | 12337271 | ID=Msa0589450-mRNA-1:exon:3613;Parent=Msa0589450-mRNA-1 |
| chr4_2 | five_prime_UTR | 12334694 | 12334724 | 12334694 | ID=Msa0589450-mRNA-1:five_prime_utr;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12334725 | 12334781 | 12334725 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12334992 | 12335067 | 12334992 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12335159 | 12335236 | 12335159 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12335327 | 12335414 | 12335327 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12335874 | 12336167 | 12335874 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12336262 | 12336503 | 12336262 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12336622 | 12336656 | 12336622 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12336727 | 12336826 | 12336727 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12337046 | 12337154 | 12337046 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | CDS | 12337271 | 12337454 | 12337271 | ID=Msa0589450-mRNA-1:cds;Parent=Msa0589450-mRNA-1 |
| chr4_2 | three_prime_UTR | 12337455 | 12337904 | 12337455 | ID=Msa0589450-mRNA-1:three_prime_utr;Parent=Msa0589450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
