AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1254250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254250 MtrunA17_Chr8g0371201 98.889 270 3 0 46 315 1 270 0.0 518
Msa1254250 MtrunA17_Chr5g0406171 57.778 270 53 4 68 315 73 303 4.22e-83 253
Msa1254250 MtrunA17_Chr3g0103761 60.274 73 29 0 101 173 39 111 4.89e-22 95.1
Msa1254250 MtrunA17_Chr2g0278661 39.474 76 46 0 109 184 9 84 5.64e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254250 AT4G35785.2 83.654 104 17 0 101 204 66 169 7.54e-58 186
Msa1254250 AT4G35785.3 86.076 79 11 0 104 182 69 147 1.52e-44 151
Msa1254250 AT4G35785.6 86.076 79 11 0 104 182 69 147 1.52e-44 151
Msa1254250 AT4G35785.1 86.076 79 11 0 104 182 69 147 2.83e-44 150
Msa1254250 AT4G35785.5 86.076 79 11 0 104 182 69 147 4.05e-44 151
Msa1254250 AT4G35785.4 86.076 79 11 0 104 182 83 161 7.88e-44 149
Msa1254250 AT1G07350.1 64.545 110 37 1 96 203 62 171 1.43e-32 124
Msa1254250 AT1G07350.3 64.045 89 30 1 96 182 32 120 4.46e-31 114
Msa1254250 AT1G07350.2 64.045 89 30 1 96 182 32 120 4.46e-31 114
Msa1254250 AT1G07350.6 63.043 92 32 1 96 185 32 123 1.29e-30 115
Msa1254250 AT1G07350.5 64.045 89 30 1 96 182 62 150 1.44e-30 113
Msa1254250 AT1G07350.4 63.043 92 32 1 96 185 62 153 3.03e-30 115
Msa1254250 AT5G04280.1 35.238 105 66 1 102 206 2 104 7.53e-11 62.4

Find 119 sgRNAs with CRISPR-Local

Find 768 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTCATGCAGTTCTTTA+TGG 0.118448 8_2:+52321030 Msa1254250:three_prime_UTR
GTGGAAATCCGTTGGGTTTA+TGG 0.181407 8_2:+52316422 Msa1254250:CDS
ATCGAAGTGATGCAGGAATT+TGG 0.271974 8_2:+52320876 Msa1254250:three_prime_UTR
GTGAACAGGGTAAGGAAAAT+TGG 0.280209 8_2:+52320741 Msa1254250:three_prime_UTR
GATACCATCATTGGGCCTTC+TGG 0.285912 8_2:+52307380 Msa1254250:CDS
GGAGCCTTTGTTGGCATCTA+AGG 0.287497 8_2:+52320953 Msa1254250:three_prime_UTR
CGGCCTCTGGAGTCGGATCT+TGG 0.290384 8_2:-52318802 None:intergenic
GGTAGGAATCGTGGTGGTTC+TGG 0.298042 8_2:+52320519 Msa1254250:CDS
CCTTGTTTCTATCTGTGAAC+AGG 0.306995 8_2:+52320727 Msa1254250:three_prime_UTR
CCTGCATCACTTCGATAATA+AGG 0.311179 8_2:-52320869 None:intergenic
CAGAAAAGTACCAACCTTAC+AGG 0.327513 8_2:-52318989 None:intergenic
GAGCATACATTCACAACATT+TGG 0.339464 8_2:-52321014 None:intergenic
TACCTCCTGTCTGGGCTATA+AGG 0.342103 8_2:-52320672 None:intergenic
AAGCAAAACCACGAGAAATT+CGG 0.345373 8_2:-52319345 None:intergenic
GGTCTAGGAGGGAGAGATCT+AGG 0.365068 8_2:+52320634 Msa1254250:CDS
CCAACACCAGGACACTATCT+TGG 0.366930 8_2:+52320234 Msa1254250:CDS
TCGGATCTTGGCCTTTGTCT+TGG 0.384472 8_2:-52318790 None:intergenic
AGCAAAACCACGAGAAATTC+GGG 0.387981 8_2:-52319344 None:intergenic
CCGAGATATGATACCATCAT+TGG 0.399656 8_2:+52307371 Msa1254250:CDS
AGTGATGCAGGAATTTGGTT+TGG 0.399733 8_2:+52320881 Msa1254250:three_prime_UTR
GTCTGGGCTATAAGGAGAAC+GGG 0.404026 8_2:-52320664 None:intergenic
TCGCTATGTGGAGCCTTTGT+TGG 0.409342 8_2:+52320944 Msa1254250:three_prime_UTR
CCAGCAGCATACCTCCTGTC+TGG 0.417882 8_2:-52320681 None:intergenic
GGTAATACACTATATGTTAC+CGG 0.422200 8_2:+52319125 Msa1254250:CDS
TATTAACCTGCCACGGCCTC+TGG 0.425891 8_2:-52318815 None:intergenic
ATGTTACCGGTCTATCTTCA+AGG 0.426524 8_2:+52319138 Msa1254250:CDS
TTCTATCTGTGAACAGGGTA+AGG 0.430906 8_2:+52320733 Msa1254250:three_prime_UTR
CGGTGACTACCGAGGTGATC+GGG 0.433447 8_2:+52320497 Msa1254250:CDS
CACCCTACGTTGGGAGGTCT+AGG 0.440750 8_2:+52320619 Msa1254250:CDS
GGAGGTATGCTGCTGGATCT+AGG 0.441332 8_2:+52320688 Msa1254250:CDS
TCGTTACATCACTGTAGAAC+GGG 0.477927 8_2:+52319438 Msa1254250:CDS
CCTTATTATCGAAGTGATGC+AGG 0.481095 8_2:+52320869 Msa1254250:three_prime_UTR
TCCACATAGCGAAATCCTAT+AGG 0.492408 8_2:-52320933 None:intergenic
CAACACCAGGACACTATCTT+GGG 0.498523 8_2:+52320235 Msa1254250:CDS
GGTTGTATTTCAGGAATTCA+AGG 0.500012 8_2:+52318707 Msa1254250:intron
GAAAGAAGTGGAAATCCGTT+GGG 0.502029 8_2:+52316415 Msa1254250:CDS
CACAGCGTTCACCCTACGTT+GGG 0.510020 8_2:+52320610 Msa1254250:CDS
CTCAATCGAGATCTAGATCA+AGG 0.511480 8_2:+52318755 Msa1254250:CDS
CCACGGTATGGTGAACGCCT+TGG 0.512842 8_2:-52320570 None:intergenic
TTTAGGGTTTACCTTGGAGG+AGG 0.514147 8_2:-52318160 None:intergenic
GAGGTCAATGCTACAAATCC+TGG 0.514479 8_2:+52319104 Msa1254250:CDS
GCTATAAGGAGAACGGGGAA+TGG 0.516525 8_2:-52320658 None:intergenic
TTCAGCCCAAGATAGTGTCC+TGG 0.521690 8_2:-52320240 None:intergenic
GCGGTGACTACCGAGGTGAT+CGG 0.521737 8_2:+52320496 Msa1254250:CDS
GCTTTCCATGGTGAAGGTGA+AGG 0.526936 8_2:-52318733 None:intergenic
GCCTATAGGATTTCGCTATG+TGG 0.527604 8_2:+52320932 Msa1254250:three_prime_UTR
CTTTCCATGGTGAAGGTGAA+GGG 0.528411 8_2:-52318732 None:intergenic
CCTGCCACGGCCTCTGGAGT+CGG 0.529099 8_2:-52318809 None:intergenic
TACAACGTTCAGCATCCTCA+TGG 0.529990 8_2:-52319384 None:intergenic
CAAGGTCTCGAAGTCCTGTA+AGG 0.531133 8_2:+52318975 Msa1254250:CDS
CGAGATATGATACCATCATT+GGG 0.531587 8_2:+52307372 Msa1254250:CDS
GACCATCGTGGCGACTTTCG+TGG 0.533751 8_2:+52320405 Msa1254250:CDS
CAGCAGCATACCTCCTGTCT+GGG 0.538718 8_2:-52320680 None:intergenic
CCTGTGTTGCTTGCTCCAGA+AGG 0.541200 8_2:-52307395 None:intergenic
CTTGTTTCTATCTGTGAACA+GGG 0.543020 8_2:+52320728 Msa1254250:three_prime_UTR
CTCCTAGACCTCCCAACGTA+GGG 0.552595 8_2:-52320621 None:intergenic
GATGTGTCTTTGCGAAAGAA+CGG 0.552872 8_2:+52316393 Msa1254250:CDS
CCAAGATAGTGTCCTGGTGT+TGG 0.556499 8_2:-52320234 None:intergenic
TGCTCCAGAAGGCCCAATGA+TGG 0.556797 8_2:-52307384 None:intergenic
GATTGAGCTTTCCATGGTGA+AGG 0.561851 8_2:-52318739 None:intergenic
GGAAAGAAGTGGAAATCCGT+TGG 0.571556 8_2:+52316414 Msa1254250:CDS
TGATCGTGGCCTCCACGGTA+TGG 0.571657 8_2:-52320582 None:intergenic
CCTTCTGGAGCAAGCAACAC+AGG 0.573518 8_2:+52307395 Msa1254250:CDS
GGTGATCGGGGTAGGAATCG+TGG 0.576279 8_2:+52320510 Msa1254250:CDS
CCAATGATGGTATCATATCT+CGG 0.577618 8_2:-52307371 None:intergenic
CCAGACAGGAGGTATGCTGC+TGG 0.579770 8_2:+52320681 Msa1254250:CDS
GATCTCGATTGAGCTTTCCA+TGG 0.582075 8_2:-52318745 None:intergenic
CCTACGTTGGGAGGTCTAGG+AGG 0.583015 8_2:+52320622 Msa1254250:CDS
TGTCTGGGCTATAAGGAGAA+CGG 0.583147 8_2:-52320665 None:intergenic
ATATTGCTATTAACCTGCCA+CGG 0.584547 8_2:-52318822 None:intergenic
CCACGAGAAATTCGGGTACG+TGG 0.585285 8_2:-52319337 None:intergenic
AGCGTTCACCCTACGTTGGG+AGG 0.588183 8_2:+52320613 Msa1254250:CDS
GTTCTCCTTATAGCCCAGAC+AGG 0.592388 8_2:+52320667 Msa1254250:CDS
CCTCCTAGACCTCCCAACGT+AGG 0.594143 8_2:-52320622 None:intergenic
GCTGCTGGATCTAGGTGAGA+TGG 0.594961 8_2:+52320696 Msa1254250:exon
GTCGTTACATCACTGTAGAA+CGG 0.596704 8_2:+52319437 Msa1254250:CDS
CCACGTACCCGAATTTCTCG+TGG 0.598234 8_2:+52319337 Msa1254250:CDS
TGTTACCGGTCTATCTTCAA+GGG 0.600140 8_2:+52319139 Msa1254250:CDS
ATTCAGATCGTAGGTCTCCA+AGG 0.600621 8_2:+52320553 Msa1254250:CDS
GGTGACCCTTGAAGATAGAC+CGG 0.603098 8_2:-52319144 None:intergenic
CGTGCAAGAACTCCAACACC+AGG 0.608015 8_2:+52320222 Msa1254250:CDS
GTGCAGATTATTCAGATCGT+AGG 0.613813 8_2:+52320544 Msa1254250:CDS
CCACAGCGTTCACCCTACGT+TGG 0.614210 8_2:+52320609 Msa1254250:CDS
TTTCCATGGTGAAGGTGAAG+GGG 0.614952 8_2:-52318731 None:intergenic
GACCATCGTGGTGACTTTCG+TGG 0.615714 8_2:+52320429 Msa1254250:CDS
CGAGGTCTGTTCCAAGACAA+AGG 0.616069 8_2:+52318779 Msa1254250:CDS
TGCGAAAGAACGGAAAGAAG+TGG 0.617338 8_2:+52316403 Msa1254250:CDS
ACAACGTTCAGCATCCTCAT+GGG 0.618967 8_2:-52319383 None:intergenic
ATGGTCCTCTAGGTCTCTGT+CGG 0.620176 8_2:-52319165 None:intergenic
CGAGATCTAGATCAAGGTCG+AGG 0.622679 8_2:+52318761 Msa1254250:CDS
AGGCTGATTCACCTCCTCCA+AGG 0.624973 8_2:+52318149 Msa1254250:intron
CTACGTTGGGAGGTCTAGGA+GGG 0.626518 8_2:+52320623 Msa1254250:CDS
AATTCCTTAGATGCCAACAA+AGG 0.633808 8_2:-52320957 None:intergenic
CACCCCTACCATAAACCCAA+CGG 0.635758 8_2:-52316430 None:intergenic
CCTGTTCACAGATAGAAACA+AGG 0.642651 8_2:-52320727 None:intergenic
AACGCTGTGGTGAATGATCG+TGG 0.649760 8_2:-52320596 None:intergenic
GGTGACTACCGAGGTGATCG+GGG 0.653474 8_2:+52320498 Msa1254250:CDS
TGTTACAATGGATTCCCATG+AGG 0.659971 8_2:+52319369 Msa1254250:CDS
GTGAATGATCGTGGCCTCCA+CGG 0.665853 8_2:-52320587 None:intergenic
AGGCCAAGATCCGACTCCAG+AGG 0.666523 8_2:+52318799 Msa1254250:CDS
GACTATCGCGGTGACTATCG+CGG 0.672143 8_2:+52320477 Msa1254250:CDS
GGTCCCCTTCACCTTCACCA+TGG 0.677035 8_2:+52318728 Msa1254250:CDS
GTAACATATAGTGTATTACC+AGG 0.681838 8_2:-52319122 None:intergenic
CCAACGTAGGGTGAACGCTG+TGG 0.691772 8_2:-52320609 None:intergenic
CCAAGGCGTTCACCATACCG+TGG 0.691985 8_2:+52320570 Msa1254250:CDS
GATTCCTACCCCGATCACCT+CGG 0.696496 8_2:-52320506 None:intergenic
CACCACGAAAGTCGCCACGA+TGG 0.701347 8_2:-52320407 None:intergenic
GACTATCGCGGTGACTACCG+AGG 0.702193 8_2:+52320489 Msa1254250:CDS
GGTCACCGACAGAGACCTAG+AGG 0.703019 8_2:+52319160 Msa1254250:CDS
AGGCGTTCACCATACCGTGG+AGG 0.712860 8_2:+52320573 Msa1254250:CDS
GACTATCGCAGTGACTATCG+CGG 0.722630 8_2:+52320465 Msa1254250:CDS
CACTGCGATGATCACCACGA+GGG 0.737645 8_2:-52320383 None:intergenic
TCTGGGCTATAAGGAGAACG+GGG 0.740426 8_2:-52320663 None:intergenic
GATCGGGGTAGGAATCGTGG+TGG 0.741391 8_2:+52320513 Msa1254250:CDS
GACTTTCGTGGTGACCATCG+TGG 0.749976 8_2:+52320417 Msa1254250:CDS
CACCACGAAAGTCACCACGA+TGG 0.751349 8_2:-52320431 None:intergenic
GACTTTCGTGGTGATCATCG+TGG 0.754400 8_2:+52320441 Msa1254250:CDS
GATCATCGCAGTGACCATCG+TGG 0.770176 8_2:+52320393 Msa1254250:CDS
TCACTGCGATGATCACCACG+AGG 0.779707 8_2:-52320384 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr8_2:52307868-52307887 Msa1254250:intron 0.0%
!! TATATATATATATATATATA+GGG + chr8_2:52307867-52307886 Msa1254250:intron 0.0%
!! TTATATAAATATTATTTAAA+TGG - chr8_2:52308299-52308318 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr8_2:52307867-52307886 Msa1254250:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr8_2:52307868-52307887 Msa1254250:intron 0.0%
!! TATATATATATATATATATA+TGG - chr8_2:52307867-52307886 None:intergenic 0.0%
!!! TTTTATTTAATTTTAATTTT+AGG - chr8_2:52313533-52313552 None:intergenic 0.0%
!!! ATATTTTTCATTTATATGTT+CGG + chr8_2:52307661-52307680 Msa1254250:intron 10.0%
!!! TTAATTTTTTATGTTATATG+GGG + chr8_2:52307693-52307712 Msa1254250:intron 10.0%
!! TAATAACTTATTTAATAACT+GGG - chr8_2:52307917-52307936 None:intergenic 10.0%
!! TTAATAACTTATTTAATAAC+TGG - chr8_2:52307918-52307937 None:intergenic 10.0%
!! ATATATTTATCGATAATAAA+TGG - chr8_2:52308067-52308086 None:intergenic 10.0%
!!! GAAGTTTTTTTTTTTTTTTT+TGG + chr8_2:52308643-52308662 Msa1254250:intron 10.0%
!! AAAAAATCGTAAAAAAAAAT+GGG - chr8_2:52309518-52309537 None:intergenic 10.0%
!! GAAAAAATCATAAAAAATTT+CGG - chr8_2:52309587-52309606 None:intergenic 10.0%
!! TTATTAACAACAATTAAAAA+AGG + chr8_2:52310605-52310624 Msa1254250:intron 10.0%
!!! TGTAAAATAGTTTTATAAAA+AGG + chr8_2:52311224-52311243 Msa1254250:intron 10.0%
!!! GTAAAATAGTTTTATAAAAA+GGG + chr8_2:52311225-52311244 Msa1254250:intron 10.0%
!!! ATTTTGTCAAAAAAAAAAAT+TGG - chr8_2:52311305-52311324 None:intergenic 10.0%
!!! CAAAAATAAAGAATTTTATT+TGG - chr8_2:52312029-52312048 None:intergenic 10.0%
!!! CAAATAAAATTCTTTATTTT+TGG + chr8_2:52312027-52312046 Msa1254250:intron 10.0%
!! AAAATATGACTAAATTATAA+AGG + chr8_2:52313611-52313630 Msa1254250:intron 10.0%
!!! ATATTTTTATTAACAACTTT+AGG - chr8_2:52313752-52313771 None:intergenic 10.0%
!! TATTACTATTTATCTTTATT+TGG + chr8_2:52314129-52314148 Msa1254250:intron 10.0%
!! AATTATGTTCAAAAATTTAA+TGG + chr8_2:52314413-52314432 Msa1254250:intron 10.0%
!! TACAAAAGTTAAAATAAAAT+AGG + chr8_2:52314477-52314496 Msa1254250:intron 10.0%
!! AAATTTCAAATATTTAATTG+AGG + chr8_2:52316233-52316252 Msa1254250:intron 10.0%
!! ATGTTTAAACAAAATAAATT+AGG - chr8_2:52317284-52317303 None:intergenic 10.0%
!!! ATCAAATTAATTTTTGTTAA+AGG + chr8_2:52317804-52317823 Msa1254250:intron 10.0%
!!! CTTTAAAAGAAATTTTATTA+AGG - chr8_2:52320044-52320063 None:intergenic 10.0%
!!! CTTAATAAAATTTCTTTTAA+AGG + chr8_2:52320042-52320061 Msa1254250:intron 10.0%
!! TAAAATTTAATCATACTTGA+GGG - chr8_2:52307618-52307637 None:intergenic 15.0%
!!! AAGTATGATTAAATTTTAGT+CGG + chr8_2:52307620-52307639 Msa1254250:intron 15.0%
!! GAACATATAAATGAAAAATA+TGG - chr8_2:52307662-52307681 None:intergenic 15.0%
!! AATAACTTATTTAATAACTG+GGG - chr8_2:52307916-52307935 None:intergenic 15.0%
!! AAACGAAACAAAATTAATTA+TGG - chr8_2:52308034-52308053 None:intergenic 15.0%
!! TTAACGTGTATATATTTATT+TGG - chr8_2:52308198-52308217 None:intergenic 15.0%
!!! GTTTTTTTTTTTTTTTTTGG+TGG + chr8_2:52308646-52308665 Msa1254250:intron 15.0%
!! ATGATTATATTTAACTCTTA+TGG + chr8_2:52308909-52308928 Msa1254250:intron 15.0%
!!! CATATTTCTATAAAGATTTT+TGG - chr8_2:52308992-52309011 None:intergenic 15.0%
!! CTAACATTAATATAAAGTTA+AGG + chr8_2:52309308-52309327 Msa1254250:intron 15.0%
!! AAAAATCGTAAAAAAAAATG+GGG - chr8_2:52309517-52309536 None:intergenic 15.0%
!! GAAAAAATCGTAAAAAAAAA+TGG - chr8_2:52309519-52309538 None:intergenic 15.0%
!!! TTTTTTTTACGATTTTTTCT+CGG + chr8_2:52309520-52309539 Msa1254250:intron 15.0%
!!! TATGTGTTTTATAATGAAAA+GGG - chr8_2:52309859-52309878 None:intergenic 15.0%
!!! TTTTAGTAAAAAGTAAGATA+TGG + chr8_2:52310368-52310387 Msa1254250:intron 15.0%
!!! TTTTAATTGTTGTTAATAAG+TGG - chr8_2:52310604-52310623 None:intergenic 15.0%
!!! TATATTGATAATATTAAGCA+GGG - chr8_2:52311087-52311106 None:intergenic 15.0%
!! TTAAATATTTCCATAAACAA+AGG + chr8_2:52311130-52311149 Msa1254250:intron 15.0%
!! TAAATATTTCCATAAACAAA+GGG + chr8_2:52311131-52311150 Msa1254250:intron 15.0%
!!! ATAAAATTCTTTATTTTTGG+TGG + chr8_2:52312030-52312049 Msa1254250:intron 15.0%
!! ATGTACCAATATATTAATTT+GGG - chr8_2:52312407-52312426 None:intergenic 15.0%
!!! TTTGAAAAGAAATTTAAAAC+TGG + chr8_2:52316294-52316313 Msa1254250:intron 15.0%
!! ATATATAAAAAGACTGTATA+AGG - chr8_2:52316332-52316351 None:intergenic 15.0%
!!! TTCATTTTTGTTAATATTTG+AGG + chr8_2:52317188-52317207 Msa1254250:intron 15.0%
!!! TCATTTTTGTTAATATTTGA+GGG + chr8_2:52317189-52317208 Msa1254250:intron 15.0%
!!! AAATTATGTTTGACATTTTT+TGG + chr8_2:52317608-52317627 Msa1254250:intron 15.0%
!!! TAAAATAAATTGTTGCATTT+TGG - chr8_2:52317834-52317853 None:intergenic 15.0%
!! ATTTCATAAGTTACTTAATT+TGG + chr8_2:52317860-52317879 Msa1254250:intron 15.0%
!! AATTAAACAGAGAATTAATT+AGG - chr8_2:52318251-52318270 None:intergenic 15.0%
!!! AATTCTCTGTTTAATTTAAT+TGG + chr8_2:52318255-52318274 Msa1254250:intron 15.0%
!!! ATATTTTTTTACGCATTTTT+AGG + chr8_2:52318281-52318300 Msa1254250:intron 15.0%
!!! TATTTTTTTACGCATTTTTA+GGG + chr8_2:52318282-52318301 Msa1254250:intron 15.0%
!!! ATTTTCATACTAAACAATTA+CGG - chr8_2:52318362-52318381 None:intergenic 15.0%
!! AGGAAACAAAAATAAAAATA+TGG - chr8_2:52321071-52321090 None:intergenic 15.0%
!! CTAAAATTTAATCATACTTG+AGG - chr8_2:52307619-52307638 None:intergenic 20.0%
!!! TAACGTTGAAATATTTTACA+CGG - chr8_2:52308117-52308136 None:intergenic 20.0%
!! AAACTAAGTATAAGATGTAT+AGG + chr8_2:52308777-52308796 Msa1254250:intron 20.0%
!!! TTCTTTTTCCATATTCTATT+TGG + chr8_2:52309105-52309124 Msa1254250:intron 20.0%
!!! TCATGATTTGAAGAAATTTT+TGG + chr8_2:52309242-52309261 Msa1254250:intron 20.0%
!!! CATGATTTGAAGAAATTTTT+GGG + chr8_2:52309243-52309262 Msa1254250:intron 20.0%
!! TATTAATGTTAGAAGAATGA+AGG - chr8_2:52309300-52309319 None:intergenic 20.0%
!!! TGGAAAAAAAAGTTTTTTGA+AGG - chr8_2:52309487-52309506 None:intergenic 20.0%
!!! CTATGTGTTTTATAATGAAA+AGG - chr8_2:52309860-52309879 None:intergenic 20.0%
!! ATTAAAGTGAAAGTTGAAAA+TGG + chr8_2:52310060-52310079 Msa1254250:intron 20.0%
!! TAGATGAGATTTATGAATTT+GGG - chr8_2:52310155-52310174 None:intergenic 20.0%
!! TTAGATGAGATTTATGAATT+TGG - chr8_2:52310156-52310175 None:intergenic 20.0%
!!! TATTATACTTTTTGGAATTG+AGG - chr8_2:52310276-52310295 None:intergenic 20.0%
!!! GAAGGAAATATTATACTTTT+TGG - chr8_2:52310284-52310303 None:intergenic 20.0%
!!! TCAAAGGAGTTTAATTTATA+TGG - chr8_2:52310531-52310550 None:intergenic 20.0%
!!! AAAATGATTTTGATCAAAGA+GGG + chr8_2:52310628-52310647 Msa1254250:intron 20.0%
!!! GTAAAATAGTCTTCTAAAAA+AGG - chr8_2:52310981-52311000 None:intergenic 20.0%
!!! ATATTGATAATATTAAGCAG+GGG - chr8_2:52311086-52311105 None:intergenic 20.0%
!!! GTATATTGATAATATTAAGC+AGG - chr8_2:52311088-52311107 None:intergenic 20.0%
!!! AATAGTTTTATAAAAAGGGA+AGG + chr8_2:52311229-52311248 Msa1254250:intron 20.0%
!!! AAAGTGCGTATTTTATATAT+TGG - chr8_2:52311333-52311352 None:intergenic 20.0%
!!! ATATATAAAATACGCACTTT+TGG + chr8_2:52311333-52311352 Msa1254250:intron 20.0%
!!! TATATAAAATACGCACTTTT+GGG + chr8_2:52311334-52311353 Msa1254250:intron 20.0%
!!! TTTGTTTTGTTAAAACAAAC+AGG + chr8_2:52311426-52311445 Msa1254250:intron 20.0%
!! TATGGACGAATAAAATAATA+AGG - chr8_2:52311731-52311750 None:intergenic 20.0%
!!! TAATGTTTTCACTATTTTGT+AGG - chr8_2:52311802-52311821 None:intergenic 20.0%
!! TAACTGTGAAATGTTATTAT+TGG - chr8_2:52311855-52311874 None:intergenic 20.0%
!!! TCAATAAATCTGAAATTGTT+AGG + chr8_2:52312314-52312333 Msa1254250:intron 20.0%
!! ATGATCCCAAATTAATATAT+TGG + chr8_2:52312399-52312418 Msa1254250:intron 20.0%
!! CATGTACCAATATATTAATT+TGG - chr8_2:52312408-52312427 None:intergenic 20.0%
!!! TCTATTTCTTCATATGTTAT+GGG - chr8_2:52312805-52312824 None:intergenic 20.0%
!!! ATCTATTTCTTCATATGTTA+TGG - chr8_2:52312806-52312825 None:intergenic 20.0%
!!! TTGAACATAATGCTTTATTA+TGG - chr8_2:52313647-52313666 None:intergenic 20.0%
!! ACAATGAATTGTTATATGTA+GGG + chr8_2:52313998-52314017 Msa1254250:intron 20.0%
!!! ACTTTTTAAAGTGAATAAGT+GGG - chr8_2:52314048-52314067 None:intergenic 20.0%
!! TTGAACATAATTGATACTTT+AGG - chr8_2:52314405-52314424 None:intergenic 20.0%
!!! TATTTTAACTTTTGTATGTC+TGG - chr8_2:52314473-52314492 None:intergenic 20.0%
!! GTGATATAATTACAAAGAAA+TGG + chr8_2:52314523-52314542 Msa1254250:intron 20.0%
!!! ACAAAGAAATGGTTTTTTTA+AGG + chr8_2:52314534-52314553 Msa1254250:intron 20.0%
!!! CAAAGAAATGGTTTTTTTAA+GGG + chr8_2:52314535-52314554 Msa1254250:intron 20.0%
!!! AAAGAAATGGTTTTTTTAAG+GGG + chr8_2:52314536-52314555 Msa1254250:intron 20.0%
!! AATAACCACTTATGATTAAA+AGG + chr8_2:52314850-52314869 Msa1254250:intron 20.0%
!! TTTCAATTCAACATACATTA+AGG + chr8_2:52315014-52315033 Msa1254250:intron 20.0%
!!! CTATTATTTTGTTATGCATT+TGG - chr8_2:52315054-52315073 None:intergenic 20.0%
!! CTAAAAAGATGATATTGAAA+AGG + chr8_2:52315249-52315268 Msa1254250:intron 20.0%
!! ATCAAAAAAATAAGAAAAGC+AGG + chr8_2:52315476-52315495 Msa1254250:intron 20.0%
!!! TTTTTTACCAAGTTAACAAT+TGG + chr8_2:52315845-52315864 Msa1254250:intron 20.0%
!! ATTTGAGTGTATCATATTTA+TGG + chr8_2:52315897-52315916 Msa1254250:intron 20.0%
!! AGTAATATAAAATGTTTGAG+AGG - chr8_2:52316038-52316057 None:intergenic 20.0%
!! ATAAATTTACAAAACTTCTC+TGG + chr8_2:52316183-52316202 Msa1254250:intron 20.0%
!! TATTTACAAATACCTAAGAT+TGG - chr8_2:52316213-52316232 None:intergenic 20.0%
!!! GTCTTTTTATATATAAAACC+AGG + chr8_2:52316338-52316357 Msa1254250:intron 20.0%
!!! TTTTATATATAAAACCAGGA+AGG + chr8_2:52316342-52316361 Msa1254250:intron 20.0%
!! AACTTAACTGAAGAAAAAAT+AGG - chr8_2:52316708-52316727 None:intergenic 20.0%
!!! TTAGTCTTTTGTATTTCTTA+CGG + chr8_2:52316796-52316815 Msa1254250:intron 20.0%
!!! TTTTTGTCCACTTTTTAATT+TGG + chr8_2:52316842-52316861 Msa1254250:intron 20.0%
!!! CAAACATAATTTTATAGAGT+TGG - chr8_2:52317600-52317619 None:intergenic 20.0%
!! AATTCTATAATCAAAAGCTA+AGG - chr8_2:52317681-52317700 None:intergenic 20.0%
!!! TAAAGATTTTGACTAAAAGT+GGG - chr8_2:52317769-52317788 None:intergenic 20.0%
!!! ATAAAGATTTTGACTAAAAG+TGG - chr8_2:52317770-52317789 None:intergenic 20.0%
!!! ATTTTTTTACGCATTTTTAG+GGG + chr8_2:52318283-52318302 Msa1254250:intron 20.0%
!! TTAAGCGTATATGTTTAATT+TGG + chr8_2:52318646-52318665 Msa1254250:intron 20.0%
!!! TAAGCGTATATGTTTAATTT+GGG + chr8_2:52318647-52318666 Msa1254250:intron 20.0%
!!! ATCTTTTCAATTGTATTTCA+GGG + chr8_2:52319082-52319101 Msa1254250:intron 20.0%
!!! TAGAATATAATTTTTCCAAG+AGG - chr8_2:52319271-52319290 None:intergenic 20.0%
!!! TTTTCAACAACTTTATAATC+AGG + chr8_2:52319924-52319943 Msa1254250:intron 20.0%
!!! TTTATAATCAGGCTTTTTTA+TGG + chr8_2:52319935-52319954 Msa1254250:intron 20.0%
!!! GAAATTTTATTAAGGATTCT+AGG - chr8_2:52320036-52320055 None:intergenic 20.0%
!! ACAAAAATAAAAATATGGAG+TGG - chr8_2:52321066-52321085 None:intergenic 20.0%
!! GTTTCTTTTTATTCAAGAAG+TGG - chr8_2:52307428-52307447 None:intergenic 25.0%
!!! ATTAAATTTTAGTCGGTTCT+TGG + chr8_2:52307627-52307646 Msa1254250:intron 25.0%
! AAACTGCTAATAGTTATGTT+AGG - chr8_2:52307751-52307770 None:intergenic 25.0%
! AGAATAACTATTAGTAGTGT+TGG + chr8_2:52307782-52307801 Msa1254250:intron 25.0%
! AATGTGTAGTAGAATATCAT+TGG + chr8_2:52308379-52308398 Msa1254250:intron 25.0%
!!! TTAGCCTTTTATAGGATAAT+CGG - chr8_2:52308506-52308525 None:intergenic 25.0%
! AAAAGATATAGCAAACAATG+TGG - chr8_2:52308547-52308566 None:intergenic 25.0%
! ATTTAACTCTTATGGTATTG+TGG + chr8_2:52308917-52308936 Msa1254250:intron 25.0%
! AAAATTAGGAATACTATCTC+TGG - chr8_2:52308946-52308965 None:intergenic 25.0%
!! ACGGATTTTCATGTAAAATT+AGG - chr8_2:52308960-52308979 None:intergenic 25.0%
!!! AGATTTTTGGTCAGATTTAA+CGG - chr8_2:52308979-52308998 None:intergenic 25.0%
!!! TTTGGCTTTGTTGAATATAT+AGG + chr8_2:52309123-52309142 Msa1254250:intron 25.0%
! AAAAAAAATGGGGAAAAATC+TGG - chr8_2:52309507-52309526 None:intergenic 25.0%
! TTTAAGGAAAAAAATAAGCC+AGG + chr8_2:52309655-52309674 Msa1254250:intron 25.0%
! TTAAGGAAAAAAATAAGCCA+GGG + chr8_2:52309656-52309675 Msa1254250:intron 25.0%
! TTTAACTGATTAAACTTTGC+AGG + chr8_2:52309755-52309774 Msa1254250:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr8_2:52309756-52309775 Msa1254250:intron 25.0%
! TCAACATTAGGAAAATACTT+GGG + chr8_2:52309930-52309949 Msa1254250:intron 25.0%
! TGACAACAGAAATACATATT+CGG - chr8_2:52310001-52310020 None:intergenic 25.0%
!!! TTGAAATTTGTTAACTGTTG+AGG + chr8_2:52310030-52310049 Msa1254250:intron 25.0%
! AGATGAGATTTATGAATTTG+GGG - chr8_2:52310154-52310173 None:intergenic 25.0%
!!! AATTAAACTCCTTTGATTTG+CGG + chr8_2:52310535-52310554 Msa1254250:intron 25.0%
!!! GAAAATGATTTTGATCAAAG+AGG + chr8_2:52310627-52310646 Msa1254250:intron 25.0%
! AGATGAGATTTAGGAATTTA+AGG + chr8_2:52310655-52310674 Msa1254250:intron 25.0%
! TTTAGGAATTTAAGGATTTG+CGG + chr8_2:52310663-52310682 Msa1254250:intron 25.0%
! AATTCAGGATTTAGAGATTT+AGG + chr8_2:52310690-52310709 Msa1254250:intron 25.0%
! ATTCAGGATTTAGAGATTTA+GGG + chr8_2:52310691-52310710 Msa1254250:intron 25.0%
!! TTAACGGAAATTTTTAACGT+CGG + chr8_2:52310823-52310842 Msa1254250:intron 25.0%
!! AATAGTCTTCTAAAAAAGGA+CGG - chr8_2:52310977-52310996 None:intergenic 25.0%
! AATTGAATCTACGAAAATCA+AGG - chr8_2:52311619-52311638 None:intergenic 25.0%
!! ATTTTCGTAGATTCAATTCT+TGG + chr8_2:52311621-52311640 Msa1254250:intron 25.0%
! AACACATATTAAACGATACT+TGG - chr8_2:52312080-52312099 None:intergenic 25.0%
!!! GTTTAATATGTGTTGTTTCA+AGG + chr8_2:52312086-52312105 Msa1254250:intron 25.0%
!! TATTAATTTGGGATCATCAT+TGG - chr8_2:52312396-52312415 None:intergenic 25.0%
! ATAATAGTCAATGTATGCAT+TGG - chr8_2:52312705-52312724 None:intergenic 25.0%
!!! TATGCTCAATTCATTTTGAT+GGG - chr8_2:52312740-52312759 None:intergenic 25.0%
!! ATATGCTCAATTCATTTTGA+TGG - chr8_2:52312741-52312760 None:intergenic 25.0%
! TGAAGAAATAGATTAGAAGA+TGG + chr8_2:52312813-52312832 Msa1254250:intron 25.0%
!! ATTAGAAGATGGACTTAATA+AGG + chr8_2:52312824-52312843 Msa1254250:intron 25.0%
!!! ACACCTACTAGTTTTTATTA+AGG + chr8_2:52313023-52313042 Msa1254250:intron 25.0%
! ACACCTTAATAAAAACTAGT+AGG - chr8_2:52313029-52313048 None:intergenic 25.0%
!! TTTTAGCAACATTCACATTA+AGG - chr8_2:52313090-52313109 None:intergenic 25.0%
!! ACACCTTCTAAAAAATAACT+GGG + chr8_2:52313111-52313130 Msa1254250:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG - chr8_2:52313176-52313195 None:intergenic 25.0%
! AAGTAGTTAAATACACCTTA+AGG + chr8_2:52313218-52313237 Msa1254250:intron 25.0%
!! TTAGTCATATTTTGCACTAT+TGG - chr8_2:52313604-52313623 None:intergenic 25.0%
!! AACATAATGCTTTATTATGG+TGG - chr8_2:52313644-52313663 None:intergenic 25.0%
! GACAATGAATTGTTATATGT+AGG + chr8_2:52313997-52314016 Msa1254250:intron 25.0%
! CAATGAATTGTTATATGTAG+GGG + chr8_2:52313999-52314018 Msa1254250:intron 25.0%
!!! CTTTTTAAAGTGAATAAGTG+GGG - chr8_2:52314047-52314066 None:intergenic 25.0%
!!! CACTTTTTAAAGTGAATAAG+TGG - chr8_2:52314049-52314068 None:intergenic 25.0%
! ATAAGTCTCAATTTGTGATT+AGG + chr8_2:52314375-52314394 Msa1254250:intron 25.0%
!!! AAGAAATGGTTTTTTTAAGG+GGG + chr8_2:52314537-52314556 Msa1254250:intron 25.0%
!! ATGACTTAGTATTTAAAGCA+AGG - chr8_2:52314636-52314655 None:intergenic 25.0%
! TATATTGGACAACATAATGT+AGG - chr8_2:52314826-52314845 None:intergenic 25.0%
! AAGTGGTTATTCTCTTATAT+TGG - chr8_2:52314841-52314860 None:intergenic 25.0%
!! CTATTCCTTTTAATCATAAG+TGG - chr8_2:52314858-52314877 None:intergenic 25.0%
! AATTGGTGAATGATTTCTAT+AGG - chr8_2:52315108-52315127 None:intergenic 25.0%
!!! CCTTTTGAAAACTATTTTAC+TGG - chr8_2:52315169-52315188 None:intergenic 25.0%
!! CCAGTAAAATAGTTTTCAAA+AGG + chr8_2:52315166-52315185 Msa1254250:intron 25.0%
! TCTATCTACTTAAGATGAAT+TGG - chr8_2:52315220-52315239 None:intergenic 25.0%
! ACTACATGACTAATTAAATG+TGG - chr8_2:52315279-52315298 None:intergenic 25.0%
!!! AATGTGATTTTTTGCAGTTT+CGG - chr8_2:52316507-52316526 None:intergenic 25.0%
! AAACTGCAAAAAATCACATT+TGG + chr8_2:52316507-52316526 Msa1254250:intron 25.0%
!! CTAGTGTTTTTCTTATATTG+CGG - chr8_2:52316624-52316643 None:intergenic 25.0%
!! TGAAAGCATACCATAAATTA+GGG - chr8_2:52317165-52317184 None:intergenic 25.0%
!! ATGAAAGCATACCATAAATT+AGG - chr8_2:52317166-52317185 None:intergenic 25.0%
! AGACGCAAAGTTTAATTATT+TGG + chr8_2:52317481-52317500 Msa1254250:intron 25.0%
! GACGCAAAGTTTAATTATTT+GGG + chr8_2:52317482-52317501 Msa1254250:intron 25.0%
! TAATAGCTTCAACTAGAATT+AGG - chr8_2:52317657-52317676 None:intergenic 25.0%
!! CTTTTCACGATGAAAAATTA+GGG - chr8_2:52318014-52318033 None:intergenic 25.0%
! TAGATATAGATAGAGTTTGA+GGG - chr8_2:52318105-52318124 None:intergenic 25.0%
! TTAGATATAGATAGAGTTTG+AGG - chr8_2:52318106-52318125 None:intergenic 25.0%
!!! TTGAATCAAAGAGTGTTTTA+GGG - chr8_2:52318179-52318198 None:intergenic 25.0%
!!! TTTGAATCAAAGAGTGTTTT+AGG - chr8_2:52318180-52318199 None:intergenic 25.0%
! AGAACCTAAATTTGATTCTT+AGG + chr8_2:52318471-52318490 Msa1254250:intron 25.0%
! TCTACCTAAGAATCAAATTT+AGG - chr8_2:52318478-52318497 None:intergenic 25.0%
!!! CAATATTGGTTTAGCTTTAA+AGG + chr8_2:52318839-52318858 Msa1254250:intron 25.0%
!! TATTTTCTCTTTTCAGATCA+AGG + chr8_2:52318957-52318976 Msa1254250:intron 25.0%
!! TTTCTGTTTTATAATCCTGT+TGG + chr8_2:52319006-52319025 Msa1254250:intron 25.0%
!! TTCTGTTTTATAATCCTGTT+GGG + chr8_2:52319007-52319026 Msa1254250:intron 25.0%
!! CATCTTTTCAATTGTATTTC+AGG + chr8_2:52319081-52319100 Msa1254250:intron 25.0%
!!! TGTCTTTCTTTTTAACTTGA+AGG + chr8_2:52319506-52319525 Msa1254250:intron 25.0%
! CTTCTTGACTGAAATAATAT+AGG - chr8_2:52320198-52320217 None:intergenic 25.0%
! AAAGAACATATTCAACATTC+AGG - chr8_2:52320309-52320328 None:intergenic 25.0%
!!! TCTGTTCTGTTTTTTTATGA+AGG + chr8_2:52320360-52320379 Msa1254250:intron 25.0%
!! ATTTTCGATTTTAAGCCTAT+AGG + chr8_2:52320918-52320937 Msa1254250:three_prime_UTR 25.0%
AGAATGATACCACATGTTTA+AGG + chr8_2:52307458-52307477 Msa1254250:intron 30.0%
ATACTTAAGCCTTAAACATG+TGG - chr8_2:52307470-52307489 None:intergenic 30.0%
TCGAACATTAGATAAATGAG+TGG - chr8_2:52307526-52307545 None:intergenic 30.0%
!!! CTGTAACTGGCATTTTTTTA+GGG + chr8_2:52307554-52307573 Msa1254250:intron 30.0%
! ATGTATGAAGTGTCAGTTAA+AGG - chr8_2:52307582-52307601 None:intergenic 30.0%
!! TATATATAGTGTTGCTTGCT+TGG - chr8_2:52307989-52308008 None:intergenic 30.0%
! TAGCCTTTTATAGGATAATC+GGG - chr8_2:52308505-52308524 None:intergenic 30.0%
ATGGCTATACCAATCTATAT+TGG + chr8_2:52308821-52308840 Msa1254250:intron 30.0%
AAGTTTCCACCAATATAGAT+TGG - chr8_2:52308833-52308852 None:intergenic 30.0%
CTATTATTTGTGTCTTTCCA+TGG + chr8_2:52309065-52309084 Msa1254250:intron 30.0%
CAACAAAGCCAAATAGAATA+TGG - chr8_2:52309116-52309135 None:intergenic 30.0%
! AATATTCTAGCTGTTGCATA+TGG + chr8_2:52309193-52309212 Msa1254250:intron 30.0%
!! GATTTGAAGAAATTTTTGGG+TGG + chr8_2:52309246-52309265 Msa1254250:intron 30.0%
TGAAGCTTACACATATTAGT+TGG + chr8_2:52309333-52309352 Msa1254250:intron 30.0%
TAAGGAAAAAAATAAGCCAG+GGG + chr8_2:52309657-52309676 Msa1254250:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr8_2:52309757-52309776 Msa1254250:intron 30.0%
AAAAAAAGATTAGCGATTGC+AGG + chr8_2:52309784-52309803 Msa1254250:intron 30.0%
AAAAAAGATTAGCGATTGCA+GGG + chr8_2:52309785-52309804 Msa1254250:intron 30.0%
TAAATGTCTCACTCAACATT+AGG + chr8_2:52309918-52309937 Msa1254250:intron 30.0%
CTCAACATTAGGAAAATACT+TGG + chr8_2:52309929-52309948 Msa1254250:intron 30.0%
AAGTGAAAGTTGAAAATGGT+TGG + chr8_2:52310064-52310083 Msa1254250:intron 30.0%
! AGGGATTTGAGATTGAATTT+AGG - chr8_2:52310115-52310134 None:intergenic 30.0%
TGAATTTGGGGATTAAATTC+AGG - chr8_2:52310142-52310161 None:intergenic 30.0%
!! CTTTGTTGTTGTTAATTCTC+TGG + chr8_2:52310205-52310224 Msa1254250:intron 30.0%
TGTTTAGTTAAGCCAAAGTT+TGG + chr8_2:52310409-52310428 Msa1254250:intron 30.0%
! GGAGTTTAATTTATATGGTG+TGG - chr8_2:52310526-52310545 None:intergenic 30.0%
TAAGTGGAGATTTGTAAGAA+AGG - chr8_2:52310588-52310607 None:intergenic 30.0%
!! AAGATATTGATTTCCTGTAC+AGG + chr8_2:52310733-52310752 Msa1254250:intron 30.0%
!! AGATATTGATTTCCTGTACA+GGG + chr8_2:52310734-52310753 Msa1254250:intron 30.0%
AAAATTTCCGTTAACTGATG+AGG - chr8_2:52310817-52310836 None:intergenic 30.0%
TGTATTTAATCATGAGTCAG+AGG + chr8_2:52310887-52310906 Msa1254250:intron 30.0%
! TTTAGAGTAAATGATCACGT+TGG - chr8_2:52310944-52310963 None:intergenic 30.0%
TCCATAAACAAAGGGTAATT+TGG + chr8_2:52311139-52311158 Msa1254250:intron 30.0%
! ACCAAATTACCCTTTGTTTA+TGG - chr8_2:52311143-52311162 None:intergenic 30.0%
!! AGTTTTATAAAAAGGGAAGG+TGG + chr8_2:52311232-52311251 Msa1254250:intron 30.0%
! GTTTTATAAAAAGGGAAGGT+GGG + chr8_2:52311233-52311252 Msa1254250:intron 30.0%
!!! GGGCTAAATTTTTTATTGAG+TGG + chr8_2:52311354-52311373 Msa1254250:intron 30.0%
TTTGTTAAGGGGATTGTTAA+AGG + chr8_2:52311531-52311550 Msa1254250:intron 30.0%
GTCTTCATCTTCTTTACATA+AGG + chr8_2:52311929-52311948 Msa1254250:intron 30.0%
TATCTTTAAGCACTTAGAAC+TGG + chr8_2:52312129-52312148 Msa1254250:intron 30.0%
ATCTTTAAGCACTTAGAACT+GGG + chr8_2:52312130-52312149 Msa1254250:intron 30.0%
! ACATGGCTATGATTTGTAAA+CGG - chr8_2:52312614-52312633 None:intergenic 30.0%
!! ATGCTCAATTCATTTTGATG+GGG - chr8_2:52312739-52312758 None:intergenic 30.0%
! ATATATATATGGGGTTTGCT+AGG + chr8_2:52312998-52313017 Msa1254250:intron 30.0%
! CACACCTTCTAAAAAATAAC+TGG + chr8_2:52313110-52313129 Msa1254250:intron 30.0%
!!! ACACCCAGTTATTTTTTAGA+AGG - chr8_2:52313117-52313136 None:intergenic 30.0%
TATTCTAGCAAATGCCTATA+GGG - chr8_2:52313151-52313170 None:intergenic 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG + chr8_2:52313170-52313189 Msa1254250:intron 30.0%
! CACACCTTCTAAAAAATAAG+TGG - chr8_2:52313177-52313196 None:intergenic 30.0%
AAACCTTGAAGTTATGCTTA+CGG - chr8_2:52313441-52313460 None:intergenic 30.0%
TAAGTCTTAACCATCCAAAA+AGG + chr8_2:52313712-52313731 Msa1254250:intron 30.0%
! AACTTGTGAAACTTCCTTTT+TGG - chr8_2:52313729-52313748 None:intergenic 30.0%
!! AACTCGATTTCTGGTAAAAT+CGG - chr8_2:52313875-52313894 None:intergenic 30.0%
! TTTACCGAGTTTACGTTTTT+AGG - chr8_2:52313925-52313944 None:intergenic 30.0%
AATTGTTATATGTAGGGGTT+TGG + chr8_2:52314004-52314023 Msa1254250:intron 30.0%
ATTGTTATATGTAGGGGTTT+GGG + chr8_2:52314005-52314024 Msa1254250:intron 30.0%
TTTCGCTTTGTATACATTGA+AGG + chr8_2:52314196-52314215 Msa1254250:intron 30.0%
TATACAAAAATACTAGCCCA+CGG + chr8_2:52314301-52314320 Msa1254250:intron 30.0%
ATGTCTCTATTATAGTCGAT+GGG - chr8_2:52314329-52314348 None:intergenic 30.0%
TATGTCTCTATTATAGTCGA+TGG - chr8_2:52314330-52314349 None:intergenic 30.0%
GTTCAAAAATTTAATGGCAC+AGG + chr8_2:52314419-52314438 Msa1254250:intron 30.0%
!!! AGAAATGGTTTTTTTAAGGG+GGG + chr8_2:52314538-52314557 Msa1254250:intron 30.0%
GTTTGCAAAGAAATGTTTGT+TGG + chr8_2:52314588-52314607 Msa1254250:intron 30.0%
!! CATGAAAAGAAAGTATTCAG+TGG - chr8_2:52314748-52314767 None:intergenic 30.0%
CATGCAATTGATATTTCTTG+TGG + chr8_2:52314769-52314788 Msa1254250:intron 30.0%
!! TGAATTCTTTAAGGCTTCAT+TGG - chr8_2:52314890-52314909 None:intergenic 30.0%
! ACGTGTCATTGAATTCTTTA+AGG - chr8_2:52314899-52314918 None:intergenic 30.0%
GTTTCAATGTATCTCTGAAT+TGG - chr8_2:52315125-52315144 None:intergenic 30.0%
ATCTACTTAAGATGAATTGG+TGG - chr8_2:52315217-52315236 None:intergenic 30.0%
ATATGCATACCAACTACTTA+AGG - chr8_2:52315358-52315377 None:intergenic 30.0%
TCACACATGTGATACAATTA+TGG - chr8_2:52315456-52315475 None:intergenic 30.0%
GTTTCATGAAATTCTCAATG+AGG + chr8_2:52315541-52315560 Msa1254250:intron 30.0%
GAAATTCTCAATGAGGATAT+TGG + chr8_2:52315548-52315567 Msa1254250:intron 30.0%
! TCTTTTCCTTCATTCTACTA+CGG - chr8_2:52315792-52315811 None:intergenic 30.0%
TAGACATTGTCTATTCTGAT+AGG + chr8_2:52316111-52316130 Msa1254250:intron 30.0%
!!! GTTTTTCTATTGGATTGGTT+CGG - chr8_2:52316463-52316482 None:intergenic 30.0%
! GTTTTTCTTATATTGCGGTT+TGG - chr8_2:52316619-52316638 None:intergenic 30.0%
CAATACTCATAGAAACTCAA+TGG + chr8_2:52316665-52316684 Msa1254250:intron 30.0%
ACGTAGACCAAATTAAAAAG+TGG - chr8_2:52316852-52316871 None:intergenic 30.0%
! GAAAGCATACCATAAATTAG+GGG - chr8_2:52317164-52317183 None:intergenic 30.0%
!! ATTTGGGTTTCACTTTTAGA+TGG + chr8_2:52317498-52317517 Msa1254250:intron 30.0%
!! TTTGGGTTTCACTTTTAGAT+GGG + chr8_2:52317499-52317518 Msa1254250:intron 30.0%
!! ATTGCTTTTGGCATTTGAAA+AGG - chr8_2:52317576-52317595 None:intergenic 30.0%
! TATAGAGTTGGAATTGCTTT+TGG - chr8_2:52317588-52317607 None:intergenic 30.0%
ACGATGAAAAATTAGGGTTT+CGG - chr8_2:52318008-52318027 None:intergenic 30.0%
! GCTTTTCACGATGAAAAATT+AGG - chr8_2:52318015-52318034 None:intergenic 30.0%
AGATATAGATAGAGTTTGAG+GGG - chr8_2:52318104-52318123 None:intergenic 30.0%
! TTCTCTATGTTTCATTTTGC+AGG + chr8_2:52318129-52318148 Msa1254250:intron 30.0%
!! TTTAGGGGTTTGATTTGTAT+TGG + chr8_2:52318298-52318317 Msa1254250:intron 30.0%
TCACCAAAGGATGAATTATT+TGG + chr8_2:52318447-52318466 Msa1254250:intron 30.0%
CACCAAAGGATGAATTATTT+GGG + chr8_2:52318448-52318467 Msa1254250:intron 30.0%
TTCTTAGGTAGAACAATTCT+TGG + chr8_2:52318486-52318505 Msa1254250:intron 30.0%
!! AAGTTTATTGTGCTGTTTGT+TGG + chr8_2:52318583-52318602 Msa1254250:intron 30.0%
!!! ACTGAAGCTATTTTTCTTTC+TGG + chr8_2:52318680-52318699 Msa1254250:intron 30.0%
!!! CTGAAGCTATTTTTCTTTCT+GGG + chr8_2:52318681-52318700 Msa1254250:intron 30.0%
!! CTGTGTTTTTGTGTTAACTT+TGG + chr8_2:52319034-52319053 Msa1254250:intron 30.0%
!! TTGTGTTAACTTTGGTCTTA+TGG + chr8_2:52319042-52319061 Msa1254250:intron 30.0%
! TTTTCAATTGTATTTCAGGG+AGG + chr8_2:52319085-52319104 Msa1254250:intron 30.0%
GTAACATATAGTGTATTACC+AGG - chr8_2:52319125-52319144 None:intergenic 30.0%
GGTAATACACTATATGTTAC+CGG + chr8_2:52319125-52319144 Msa1254250:CDS 30.0%
!!! TCCTCAATTGTTGTTTTCTT+CGG + chr8_2:52319235-52319254 Msa1254250:intron 30.0%
!! TGGTTTTGCTTTTGTTACAA+TGG + chr8_2:52319357-52319376 Msa1254250:CDS 30.0%
!! TCTCAATCAATCAGTTTTAG+AGG + chr8_2:52319414-52319433 Msa1254250:CDS 30.0%
!!! CTCAATCAATCAGTTTTAGA+GGG + chr8_2:52319415-52319434 Msa1254250:CDS 30.0%
!! TGTGTTTTCACTTTTGTTAG+TGG + chr8_2:52319464-52319483 Msa1254250:intron 30.0%
!!! TTTTTAACTTGAAGGTTCTC+TGG + chr8_2:52319514-52319533 Msa1254250:intron 30.0%
CATTGAAATTGCTTGATCAA+TGG + chr8_2:52319607-52319626 Msa1254250:intron 30.0%
ACTAAACATAGCAACTATGT+TGG + chr8_2:52319664-52319683 Msa1254250:intron 30.0%
AAAGTTGAAAGTGAATACTG+AGG - chr8_2:52319705-52319724 None:intergenic 30.0%
TAGTGAAACTGCTTAATCAA+TGG + chr8_2:52319789-52319808 Msa1254250:intron 30.0%
AAGTGAATGCTGAATTTGTA+AGG - chr8_2:52319879-52319898 None:intergenic 30.0%
TTCAACTCTCAACTAAACAA+CGG + chr8_2:52319898-52319917 Msa1254250:intron 30.0%
! TTTTTATGGTATCTCACACT+TGG + chr8_2:52319949-52319968 Msa1254250:intron 30.0%
ATTAAGGATTCTAGGTAAAG+AGG - chr8_2:52320028-52320047 None:intergenic 30.0%
CTGAAAAATACTAGAGACTA+TGG + chr8_2:52320258-52320277 Msa1254250:CDS 30.0%
!! TGCAGTTCTTTATGGTTTTA+TGG + chr8_2:52321038-52321057 Msa1254250:three_prime_UTR 30.0%
!!! GCAGTTCTTTATGGTTTTAT+GGG + chr8_2:52321039-52321058 Msa1254250:three_prime_UTR 30.0%
CCAATGATGGTATCATATCT+CGG - chr8_2:52307374-52307393 None:intergenic 35.0%
CGAGATATGATACCATCATT+GGG + chr8_2:52307372-52307391 Msa1254250:CDS 35.0%
CCTAAAAAAATGCCAGTTAC+AGG - chr8_2:52307556-52307575 None:intergenic 35.0%
!!! CCTGTAACTGGCATTTTTTT+AGG + chr8_2:52307553-52307572 Msa1254250:intron 35.0%
ATCCCCGATTATCCTATAAA+AGG + chr8_2:52308499-52308518 Msa1254250:intron 35.0%
! AGCCTTTTATAGGATAATCG+GGG - chr8_2:52308504-52308523 None:intergenic 35.0%
!!! CTGCAGAATTAGCCTTTTAT+AGG - chr8_2:52308514-52308533 None:intergenic 35.0%
AGATATAGCAAACAATGTGG+CGG - chr8_2:52308544-52308563 None:intergenic 35.0%
AAAGCTTGCATCAAAGCATA+TGG - chr8_2:52308590-52308609 None:intergenic 35.0%
TTTGGTGGAATTTCACTTCT+TGG + chr8_2:52308661-52308680 Msa1254250:intron 35.0%
TTGGTGGAATTTCACTTCTT+GGG + chr8_2:52308662-52308681 Msa1254250:intron 35.0%
! TCTCTCCTTTTTCTAAGCAT+AGG + chr8_2:52308695-52308714 Msa1254250:intron 35.0%
! CTCTCCTTTTTCTAAGCATA+GGG + chr8_2:52308696-52308715 Msa1254250:intron 35.0%
TTCACCCTATGCTTAGAAAA+AGG - chr8_2:52308703-52308722 None:intergenic 35.0%
! TTTTACTAACCCCATGTTCA+TGG + chr8_2:52308802-52308821 Msa1254250:intron 35.0%
ATTGGTATAGCCATGAACAT+GGG - chr8_2:52308815-52308834 None:intergenic 35.0%
GCTATACCAATCTATATTGG+TGG + chr8_2:52308824-52308843 Msa1254250:intron 35.0%
AGTCACCGTGACATTAAATT+TGG + chr8_2:52309961-52309980 Msa1254250:intron 35.0%
GTCACCGTGACATTAAATTT+GGG + chr8_2:52309962-52309981 Msa1254250:intron 35.0%
TTTGTTAACTGTTGAGGTGT+AGG + chr8_2:52310036-52310055 Msa1254250:intron 35.0%
TTGTTAACTGTTGAGGTGTA+GGG + chr8_2:52310037-52310056 Msa1254250:intron 35.0%
GGGATTAAATTCAGGATCTA+GGG - chr8_2:52310134-52310153 None:intergenic 35.0%
TTAGTTAAGCCAAAGTTTGG+AGG + chr8_2:52310412-52310431 Msa1254250:intron 35.0%
GAGGGAATTAGATGAGATTT+AGG + chr8_2:52310646-52310665 Msa1254250:intron 35.0%
! AGGATTTGCGGATTAAATTC+AGG + chr8_2:52310675-52310694 Msa1254250:intron 35.0%
! AGGGATTTGAGATTCAACTT+AGG + chr8_2:52310710-52310729 Msa1254250:intron 35.0%
!! TCACGAGTATTGAGAAAAGT+TGG - chr8_2:52311200-52311219 None:intergenic 35.0%
TATCGATGCCTACTTTGTTA+AGG + chr8_2:52311518-52311537 Msa1254250:intron 35.0%
ATCGATGCCTACTTTGTTAA+GGG + chr8_2:52311519-52311538 Msa1254250:intron 35.0%
AACAATCCCCTTAACAAAGT+AGG - chr8_2:52311529-52311548 None:intergenic 35.0%
GTCAAAGATACAACATGCTT+GGG - chr8_2:52311595-52311614 None:intergenic 35.0%
TGTCAAAGATACAACATGCT+TGG - chr8_2:52311596-52311615 None:intergenic 35.0%
ATCCTATTCTTGTGCACTAA+AGG - chr8_2:52311900-52311919 None:intergenic 35.0%
CATCTTCTTTACATAAGGCA+TGG + chr8_2:52311934-52311953 Msa1254250:intron 35.0%
CAATCTCAACCTAGTAAGAA+AGG + chr8_2:52311986-52312005 Msa1254250:intron 35.0%
ACGATACTTGGAAAACCATT+TGG - chr8_2:52312068-52312087 None:intergenic 35.0%
GATCATCATTGGATTCAAAG+CGG - chr8_2:52312385-52312404 None:intergenic 35.0%
TATCCCAAGTTATGTTTGGA+GGG - chr8_2:52312485-52312504 None:intergenic 35.0%
ATATCCCAAGTTATGTTTGG+AGG - chr8_2:52312486-52312505 None:intergenic 35.0%
GACATATCCCAAGTTATGTT+TGG - chr8_2:52312489-52312508 None:intergenic 35.0%
AGTCTAATGATCAAAGAGTC+TGG + chr8_2:52312567-52312586 Msa1254250:intron 35.0%
! CATGGCTATGATTTGTAAAC+GGG - chr8_2:52312613-52312632 None:intergenic 35.0%
ATCATAGCCATGTTGAAACT+TGG + chr8_2:52312621-52312640 Msa1254250:intron 35.0%
AAAGTGACCAAGTTTCAACA+TGG - chr8_2:52312631-52312650 None:intergenic 35.0%
ACTCATGCAACGTAATCTTA+TGG + chr8_2:52312655-52312674 Msa1254250:intron 35.0%
ATTCTAGCAAATGCCTATAG+GGG - chr8_2:52313150-52313169 None:intergenic 35.0%
GTATTCTAGCAAATGCCTAT+AGG - chr8_2:52313152-52313171 None:intergenic 35.0%
! TTTTAGCAAGCTACACCTTA+AGG - chr8_2:52313236-52313255 None:intergenic 35.0%
ACTCCCACATAAAAACTAGT+GGG + chr8_2:52313257-52313276 Msa1254250:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG - chr8_2:52313263-52313282 None:intergenic 35.0%
!!! GATTTTTTTGCAACAACGCT+CGG - chr8_2:52313395-52313414 None:intergenic 35.0%
CGTTGTTGCAAAAAAATCGA+TGG + chr8_2:52313397-52313416 Msa1254250:intron 35.0%
ATGCTTACGGAAACAACATA+GGG - chr8_2:52313428-52313447 None:intergenic 35.0%
TATGCTTACGGAAACAACAT+AGG - chr8_2:52313429-52313448 None:intergenic 35.0%
TTTCCGTAAGCATAACTTCA+AGG + chr8_2:52313435-52313454 Msa1254250:intron 35.0%
! TGTGAAACTTCCTTTTTGGA+TGG - chr8_2:52313725-52313744 None:intergenic 35.0%
GGTACCTAAAAACGTAAACT+CGG + chr8_2:52313918-52313937 Msa1254250:intron 35.0%
! ACGAGTTAACACTTGATTTG+TGG + chr8_2:52313949-52313968 Msa1254250:intron 35.0%
TTGTTATATGTAGGGGTTTG+GGG + chr8_2:52314006-52314025 Msa1254250:intron 35.0%
GCTTTGTATACATTGAAGGA+CGG + chr8_2:52314200-52314219 Msa1254250:intron 35.0%
ATACAAAAATACTAGCCCAC+GGG + chr8_2:52314302-52314321 Msa1254250:intron 35.0%
TTCCATCGTCTAACATCAAT+GGG - chr8_2:52314664-52314683 None:intergenic 35.0%
TTTCCATCGTCTAACATCAA+TGG - chr8_2:52314665-52314684 None:intergenic 35.0%
TGATGTTAGACGATGGAAAT+TGG + chr8_2:52314666-52314685 Msa1254250:intron 35.0%
!! TGAGCTTTAAAAGCAACGTT+AGG - chr8_2:52314706-52314725 None:intergenic 35.0%
!! CAGTGGTATTATTTTACTGC+TGG - chr8_2:52314731-52314750 None:intergenic 35.0%
!! TGCTATTTCATTTACGTGAC+AGG - chr8_2:52314958-52314977 None:intergenic 35.0%
! CAATTTGTTTCCATGTGATG+TGG - chr8_2:52315631-52315650 None:intergenic 35.0%
ACACAAGAGTTTAAGTCATG+TGG + chr8_2:52315717-52315736 Msa1254250:intron 35.0%
CACAAGAGTTTAAGTCATGT+GGG + chr8_2:52315718-52315737 Msa1254250:intron 35.0%
ACTCACTCCAATTGTTAACT+TGG - chr8_2:52315855-52315874 None:intergenic 35.0%
AATCATTAACATGACCTTCC+TGG - chr8_2:52316359-52316378 None:intergenic 35.0%
! TTGCGGTTTTTCTATTGGAT+TGG - chr8_2:52316468-52316487 None:intergenic 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr8_2:52316473-52316492 None:intergenic 35.0%
!!! GATTTTTTGCAGTTTCGGTT+TGG - chr8_2:52316502-52316521 None:intergenic 35.0%
!! TCTTATATTGCGGTTTGGTT+TGG - chr8_2:52316614-52316633 None:intergenic 35.0%
! GTTTCTATGAGTATTGCTCT+AGG - chr8_2:52316661-52316680 None:intergenic 35.0%
TACGTAGTTGAGAACATTGT+TGG + chr8_2:52316867-52316886 Msa1254250:intron 35.0%
! GGATAAAAAAGTATGCGGTT+TGG - chr8_2:52317088-52317107 None:intergenic 35.0%
! CAGCAGGATAAAAAAGTATG+CGG - chr8_2:52317093-52317112 None:intergenic 35.0%
CTAAGACATCTAAAAGGCAA+AGG - chr8_2:52317549-52317568 None:intergenic 35.0%
!!! GATTTTGACTAAAAGTGGGT+TGG - chr8_2:52317765-52317784 None:intergenic 35.0%
TTAATACGACAGGTATACGT+TGG - chr8_2:52317915-52317934 None:intergenic 35.0%
! TGAATGGATTCGAAGATGAA+TGG - chr8_2:52317978-52317997 None:intergenic 35.0%
ACTTGCCATGAGAGTAAAAA+TGG - chr8_2:52318039-52318058 None:intergenic 35.0%
! GAAAAAAATGGCGTTGAGAT+TGG - chr8_2:52318071-52318090 None:intergenic 35.0%
GGAAGCTGAGAAGAAAAAAA+TGG - chr8_2:52318083-52318102 None:intergenic 35.0%
! TGGTTAATTAGCTTCACCAA+AGG + chr8_2:52318434-52318453 Msa1254250:intron 35.0%
CTCCCAAATAATTCATCCTT+TGG - chr8_2:52318453-52318472 None:intergenic 35.0%
GGTTGTATTTCAGGAATTCA+AGG + chr8_2:52318707-52318726 Msa1254250:intron 35.0%
! ATATTGCTATTAACCTGCCA+CGG - chr8_2:52318825-52318844 None:intergenic 35.0%
TGGCAGGTTAATAGCAATAT+TGG + chr8_2:52318825-52318844 Msa1254250:intron 35.0%
ACACAGAGAACTAGAGAATT+CGG - chr8_2:52318883-52318902 None:intergenic 35.0%
TTACTACTTTGTGGAATGAC+TGG + chr8_2:52318934-52318953 Msa1254250:intron 35.0%
!! CTTTTCCCTCCTTTGAAAAA+TGG - chr8_2:52319187-52319206 None:intergenic 35.0%
ACCGAAGAAAACAACAATTG+AGG - chr8_2:52319239-52319258 None:intergenic 35.0%
!!! CAATTGTTGTTTTCTTCGGT+TGG + chr8_2:52319239-52319258 Msa1254250:intron 35.0%
AACATGAAGCAACCTACAAA+AGG - chr8_2:52319303-52319322 None:intergenic 35.0%
AAGCAAAACCACGAGAAATT+CGG - chr8_2:52319348-52319367 None:intergenic 35.0%
CTACATTGCATCAGTTATGT+TGG + chr8_2:52319548-52319567 Msa1254250:intron 35.0%
! GTTGATGAGTTGCATTTGAT+TGG - chr8_2:52319646-52319665 None:intergenic 35.0%
AAGTGAATACTGAGGTTGTA+AGG - chr8_2:52319697-52319716 None:intergenic 35.0%
AACATAGCTGATGCAATGTA+TGG - chr8_2:52319731-52319750 None:intergenic 35.0%
ATACATTGCATCAGCTATGT+TGG + chr8_2:52319730-52319749 Msa1254250:intron 35.0%
GTTGATCAGTTGCATTTGAT+TGG - chr8_2:52319828-52319847 None:intergenic 35.0%
! GCTGAATTTGTAAGGTTGAT+TGG - chr8_2:52319871-52319890 None:intergenic 35.0%
!! CTTGTTTCTATCTGTGAACA+GGG + chr8_2:52320728-52320747 Msa1254250:three_prime_UTR 35.0%
AATTCCTTAGATGCCAACAA+AGG - chr8_2:52320960-52320979 None:intergenic 35.0%
GAGCATACATTCACAACATT+TGG - chr8_2:52321017-52321036 None:intergenic 35.0%
TATGCTCATGCAGTTCTTTA+TGG + chr8_2:52321030-52321049 Msa1254250:three_prime_UTR 35.0%
CCGAGATATGATACCATCAT+TGG + chr8_2:52307371-52307390 Msa1254250:CDS 40.0%
TTCGACTTTAAGCCTGTAAC+TGG + chr8_2:52307541-52307560 Msa1254250:intron 40.0%
GTCTCTATTGATCTTGTGCA+GGG - chr8_2:52307950-52307969 None:intergenic 40.0%
AGTCTCTATTGATCTTGTGC+AGG - chr8_2:52307951-52307970 None:intergenic 40.0%
AAAACTTCTGCACACATGCA+GGG - chr8_2:52308631-52308650 None:intergenic 40.0%
AAAAACTTCTGCACACATGC+AGG - chr8_2:52308632-52308651 None:intergenic 40.0%
TGGTGGAATTTCACTTCTTG+GGG + chr8_2:52308663-52308682 Msa1254250:intron 40.0%
ATTTCACTTCTTGGGGCATA+TGG + chr8_2:52308670-52308689 Msa1254250:intron 40.0%
TTGGTATAGCCATGAACATG+GGG - chr8_2:52308814-52308833 None:intergenic 40.0%
GATTGGTATAGCCATGAACA+TGG - chr8_2:52308816-52308835 None:intergenic 40.0%
GATACATGTAGCAAACTCCA+TGG - chr8_2:52309085-52309104 None:intergenic 40.0%
ACGTCAGCAAATCACCAAAA+TGG - chr8_2:52309703-52309722 None:intergenic 40.0%
!!! ATTTTGGTGATTTGCTGACG+TGG + chr8_2:52309702-52309721 Msa1254250:intron 40.0%
CAGTGATTAAACTGGGTCAA+AGG + chr8_2:52309725-52309744 Msa1254250:intron 40.0%
! GTGAGACATTTATGATAGCG+AGG - chr8_2:52309910-52309929 None:intergenic 40.0%
GTGGCCCAAATTTAATGTCA+CGG - chr8_2:52309969-52309988 None:intergenic 40.0%
ACATATTCGGAGACTTTGTG+TGG - chr8_2:52309988-52310007 None:intergenic 40.0%
GGGGATTAAATTCAGGATCT+AGG - chr8_2:52310135-52310154 None:intergenic 40.0%
!! GCACTTAGACTCTAGAATGA+AGG - chr8_2:52310302-52310321 None:intergenic 40.0%
TTGAGTATGCCTCCAAACTT+TGG - chr8_2:52310424-52310443 None:intergenic 40.0%
! TGGAGGCATACTCAATTGTT+TGG + chr8_2:52310429-52310448 Msa1254250:intron 40.0%
! TCTTTTGTGCCGCAAATCAA+AGG - chr8_2:52310547-52310566 None:intergenic 40.0%
!! AATCACTTTTGTCCCTGTAC+AGG - chr8_2:52310749-52310768 None:intergenic 40.0%
!! GGCATCGATATATGAATCAG+AGG - chr8_2:52311508-52311527 None:intergenic 40.0%
TCGATGCCTACTTTGTTAAG+GGG + chr8_2:52311520-52311539 Msa1254250:intron 40.0%
AGGCTCTTTAATGTGTGGTT+TGG + chr8_2:52311680-52311699 Msa1254250:intron 40.0%
TGCCTTTAGTGCACAAGAAT+AGG + chr8_2:52311895-52311914 Msa1254250:intron 40.0%
TTACATAAGGCATGGTGAGA+TGG + chr8_2:52311942-52311961 Msa1254250:intron 40.0%
AGGTTGAGATTGCATATGTG+TGG - chr8_2:52311978-52311997 None:intergenic 40.0%
CAACACTTGCCTTTCTTACT+AGG - chr8_2:52311998-52312017 None:intergenic 40.0%
! GGACATTGTTGCTTGGAAAT+TGG - chr8_2:52312173-52312192 None:intergenic 40.0%
TTCAACAGGACATTGTTGCT+TGG - chr8_2:52312180-52312199 None:intergenic 40.0%
AACAATGTCCTGTTGAACCA+GGG + chr8_2:52312183-52312202 Msa1254250:intron 40.0%
! TATGTTTTCCCTGGTTCAAC+AGG - chr8_2:52312194-52312213 None:intergenic 40.0%
TGTTGAACCAGGGAAAACAT+AGG + chr8_2:52312193-52312212 Msa1254250:intron 40.0%
! CAAAACACCTATGTTTTCCC+TGG - chr8_2:52312203-52312222 None:intergenic 40.0%
GAAAAGGAGATTGTTCAACG+CGG - chr8_2:52312451-52312470 None:intergenic 40.0%
GTTATGTTTGGAGGGTCATT+TGG - chr8_2:52312477-52312496 None:intergenic 40.0%
ATGACCCTCCAAACATAACT+TGG + chr8_2:52312478-52312497 Msa1254250:intron 40.0%
TGACCCTCCAAACATAACTT+GGG + chr8_2:52312479-52312498 Msa1254250:intron 40.0%
! CTATGATTTGTAAACGGGCA+TGG - chr8_2:52312608-52312627 None:intergenic 40.0%
! TGATCAGTAGTCTAGAACAG+AGG + chr8_2:52312773-52312792 Msa1254250:intron 40.0%
TGTATGTTAGCAACCCCTAT+AGG + chr8_2:52313134-52313153 Msa1254250:intron 40.0%
CACTCCCACATAAAAACTAG+TGG + chr8_2:52313256-52313275 Msa1254250:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG - chr8_2:52313264-52313283 None:intergenic 40.0%
!! TTCTCGAGTTGAGTTTACCT+GGG - chr8_2:52313496-52313515 None:intergenic 40.0%
CGGGTAAACTCGAGTAAAAT+CGG - chr8_2:52313802-52313821 None:intergenic 40.0%
! GAGTTTGACTCGAGTTAACT+CGG - chr8_2:52313842-52313861 None:intergenic 40.0%
TTGGAGGTAAACTCGATTTC+TGG - chr8_2:52313884-52313903 None:intergenic 40.0%
GTACCAAAATCGTGTCAACT+TGG - chr8_2:52313903-52313922 None:intergenic 40.0%
! ACTGCATAGCTTAGTTGGTA+GGG + chr8_2:52313975-52313994 Msa1254250:intron 40.0%
AAGGACGGTATCCTAGTTAT+GGG + chr8_2:52314215-52314234 Msa1254250:intron 40.0%
! TCCTAGTTATGGGGTATCTA+CGG + chr8_2:52314225-52314244 Msa1254250:intron 40.0%
!! GCGTGCGCATTATATTTTTG+TGG - chr8_2:52314254-52314273 None:intergenic 40.0%
TCGTCTAACATCAATGGGAA+GGG - chr8_2:52314659-52314678 None:intergenic 40.0%
ATCGTCTAACATCAATGGGA+AGG - chr8_2:52314660-52314679 None:intergenic 40.0%
TTCCCATTGATGTTAGACGA+TGG + chr8_2:52314659-52314678 Msa1254250:intron 40.0%
CAAACACGTCCTTAAGTAGT+TGG + chr8_2:52315346-52315365 Msa1254250:intron 40.0%
! CCATGTGATGTGGAACTTTT+TGG - chr8_2:52315621-52315640 None:intergenic 40.0%
CCAAAAAGTTCCACATCACA+TGG + chr8_2:52315618-52315637 Msa1254250:intron 40.0%
ACATCACCGTAGTAGAATGA+AGG + chr8_2:52315783-52315802 Msa1254250:intron 40.0%
TGATTGATGAGAGAGAGTGA+AGG + chr8_2:52315966-52315985 Msa1254250:intron 40.0%
GATTGATGAGAGAGAGTGAA+GGG + chr8_2:52315967-52315986 Msa1254250:intron 40.0%
CTATTCTGATAGGTGACATC+AGG + chr8_2:52316121-52316140 Msa1254250:intron 40.0%
!! TTCTCTGGTTCTCCAATCTT+AGG + chr8_2:52316198-52316217 Msa1254250:intron 40.0%
GATGTGTCTTTGCGAAAGAA+CGG + chr8_2:52316393-52316412 Msa1254250:CDS 40.0%
GAAAGAAGTGGAAATCCGTT+GGG + chr8_2:52316415-52316434 Msa1254250:CDS 40.0%
AAATCCGTTGGGTTTATGGT+AGG + chr8_2:52316426-52316445 Msa1254250:intron 40.0%
AATCCGTTGGGTTTATGGTA+GGG + chr8_2:52316427-52316446 Msa1254250:intron 40.0%
!! GTTTGGATTGGTTTGGTTTG+CGG - chr8_2:52316485-52316504 None:intergenic 40.0%
!! AGTTTCGGTTTGGATTGGTT+TGG - chr8_2:52316492-52316511 None:intergenic 40.0%
!! TTTGCAGTTTCGGTTTGGAT+TGG - chr8_2:52316497-52316516 None:intergenic 40.0%
!!! CATTTTTTTGCTCAACCGCA+TGG + chr8_2:52316547-52316566 Msa1254250:intron 40.0%
GCAAACCAAATCAAACCATG+CGG - chr8_2:52316565-52316584 None:intergenic 40.0%
!! TATTGCGGTTTGGTTTGGTT+TGG - chr8_2:52316609-52316628 None:intergenic 40.0%
! CCATGCAGTTTGGATTAGAT+CGG - chr8_2:52317016-52317035 None:intergenic 40.0%
CTAATCCAAACTGCATGGTT+TGG + chr8_2:52317018-52317037 Msa1254250:intron 40.0%
CTAAAAGTCATCAGAACAGC+AGG - chr8_2:52317109-52317128 None:intergenic 40.0%
!! TGCGGTTTGGTTAAACTTTG+AGG - chr8_2:52317132-52317151 None:intergenic 40.0%
TAAAAGGCAAAGGCTATGGA+GGG - chr8_2:52317539-52317558 None:intergenic 40.0%
CATCTAAAAGGCAAAGGCTA+TGG - chr8_2:52317543-52317562 None:intergenic 40.0%
! GGACGTCTAAGACATCTAAA+AGG - chr8_2:52317555-52317574 None:intergenic 40.0%
!!! AAGCGCCATTTTTACTCTCA+TGG + chr8_2:52318031-52318050 Msa1254250:intron 40.0%
!!! TGTTTTAGGGTTTACCTTGG+AGG - chr8_2:52318166-52318185 None:intergenic 40.0%
!!! GAGTGTTTTAGGGTTTACCT+TGG - chr8_2:52318169-52318188 None:intergenic 40.0%
ACCAAGTGATTGAACACAAG+TGG + chr8_2:52318414-52318433 Msa1254250:intron 40.0%
ACCACTTGTGTTCAATCACT+TGG - chr8_2:52318418-52318437 None:intergenic 40.0%
!! TTGTGCTGTTTGTTGGAAAG+TGG + chr8_2:52318590-52318609 Msa1254250:intron 40.0%
!!! GCTATTTTTCTTTCTGGGCA+TGG + chr8_2:52318686-52318705 Msa1254250:intron 40.0%
CTCAATCGAGATCTAGATCA+AGG + chr8_2:52318755-52318774 Msa1254250:CDS 40.0%
CCACAAAGTAGTAACAAGAG+AGG - chr8_2:52318928-52318947 None:intergenic 40.0%
CCTCTCTTGTTACTACTTTG+TGG + chr8_2:52318925-52318944 Msa1254250:intron 40.0%
!! CAGAAAAGTACCAACCTTAC+AGG - chr8_2:52318992-52319011 None:intergenic 40.0%
AAAAACACAGCTATCCCAAC+AGG - chr8_2:52319024-52319043 None:intergenic 40.0%
ATGTTACCGGTCTATCTTCA+AGG + chr8_2:52319138-52319157 Msa1254250:CDS 40.0%
TGTTACCGGTCTATCTTCAA+GGG + chr8_2:52319139-52319158 Msa1254250:CDS 40.0%
! CCTTTGAAAAATGGTCCTCT+AGG - chr8_2:52319178-52319197 None:intergenic 40.0%
!! CCTAGAGGACCATTTTTCAA+AGG + chr8_2:52319175-52319194 Msa1254250:CDS 40.0%
!! AGAGGACCATTTTTCAAAGG+AGG + chr8_2:52319178-52319197 Msa1254250:CDS 40.0%
!! GAGGACCATTTTTCAAAGGA+GGG + chr8_2:52319179-52319198 Msa1254250:CDS 40.0%
!!! CTACTGCTGTTTCCTTTTGT+AGG + chr8_2:52319288-52319307 Msa1254250:intron 40.0%
! GGTTGCTTCATGTTTTCTTG+TGG + chr8_2:52319309-52319328 Msa1254250:intron 40.0%
! TGCTTCATGTTTTCTTGTGG+TGG + chr8_2:52319312-52319331 Msa1254250:CDS 40.0%
AGCAAAACCACGAGAAATTC+GGG - chr8_2:52319347-52319366 None:intergenic 40.0%
! TGTTACAATGGATTCCCATG+AGG + chr8_2:52319369-52319388 Msa1254250:CDS 40.0%
GTCGTTACATCACTGTAGAA+CGG + chr8_2:52319437-52319456 Msa1254250:CDS 40.0%
TCGTTACATCACTGTAGAAC+GGG + chr8_2:52319438-52319457 Msa1254250:CDS 40.0%
!!! TTTTTTTATGAAGGCCCTCG+TGG + chr8_2:52320369-52320388 Msa1254250:intron 40.0%
GTGCAGATTATTCAGATCGT+AGG + chr8_2:52320544-52320563 Msa1254250:CDS 40.0%
CCTGTTCACAGATAGAAACA+AGG - chr8_2:52320730-52320749 None:intergenic 40.0%
!! CCTTGTTTCTATCTGTGAAC+AGG + chr8_2:52320727-52320746 Msa1254250:three_prime_UTR 40.0%
TTCTATCTGTGAACAGGGTA+AGG + chr8_2:52320733-52320752 Msa1254250:three_prime_UTR 40.0%
GTGAACAGGGTAAGGAAAAT+TGG + chr8_2:52320741-52320760 Msa1254250:three_prime_UTR 40.0%
CCTGCATCACTTCGATAATA+AGG - chr8_2:52320872-52320891 None:intergenic 40.0%
CCTTATTATCGAAGTGATGC+AGG + chr8_2:52320869-52320888 Msa1254250:three_prime_UTR 40.0%
ATCGAAGTGATGCAGGAATT+TGG + chr8_2:52320876-52320895 Msa1254250:three_prime_UTR 40.0%
AGTGATGCAGGAATTTGGTT+TGG + chr8_2:52320881-52320900 Msa1254250:three_prime_UTR 40.0%
TCCACATAGCGAAATCCTAT+AGG - chr8_2:52320936-52320955 None:intergenic 40.0%
TGACGTGGCAGTGATTAAAC+TGG + chr8_2:52309717-52309736 Msa1254250:intron 45.0%
GACGTGGCAGTGATTAAACT+GGG + chr8_2:52309718-52309737 Msa1254250:intron 45.0%
TTTAAGCGAGCCCTATTTGC+AGG + chr8_2:52309815-52309834 Msa1254250:intron 45.0%
TTAAGCGAGCCCTATTTGCA+GGG + chr8_2:52309816-52309835 Msa1254250:intron 45.0%
GTGATTCGTCCCTGCAAATA+GGG - chr8_2:52309828-52309847 None:intergenic 45.0%
TGTGATTCGTCCCTGCAAAT+AGG - chr8_2:52309829-52309848 None:intergenic 45.0%
CACGTCACCTCATCAGTTAA+CGG + chr8_2:52310807-52310826 Msa1254250:intron 45.0%
! CAGAAGTGCACATTCGAAGA+CGG + chr8_2:52310861-52310880 Msa1254250:intron 45.0%
TTTGCACCTCGCTTTCAGAA+AGG - chr8_2:52310913-52310932 None:intergenic 45.0%
TGAAAGCGAGGTGCAAAGTT+AGG + chr8_2:52310916-52310935 Msa1254250:intron 45.0%
GAAAGCGAGGTGCAAAGTTA+GGG + chr8_2:52310917-52310936 Msa1254250:intron 45.0%
AAGGGAAGGTGGGAGTAATT+TGG + chr8_2:52311243-52311262 Msa1254250:intron 45.0%
!! CTGTCAATTCCTCTGAAGTG+TGG + chr8_2:52311657-52311676 Msa1254250:intron 45.0%
!! TCAATTCCTCTGAAGTGTGG+AGG + chr8_2:52311660-52311679 Msa1254250:intron 45.0%
TGTGGAGGCTCTTTAATGTG+TGG + chr8_2:52311675-52311694 Msa1254250:intron 45.0%
!! GTCCATATGCTCTAGAGCAT+GGG + chr8_2:52311744-52311763 Msa1254250:intron 45.0%
!! TCCATATGCTCTAGAGCATG+GGG + chr8_2:52311745-52311764 Msa1254250:intron 45.0%
! GCACTAAAGGCATGTAGTGT+TGG - chr8_2:52311887-52311906 None:intergenic 45.0%
!! TGGCAGTTTTGCTGTCCAAA+TGG + chr8_2:52312050-52312069 Msa1254250:intron 45.0%
CAACAATGTCCTGTTGAACC+AGG + chr8_2:52312182-52312201 Msa1254250:intron 45.0%
! GAGGGTCATTTGGAGTGAAA+AGG - chr8_2:52312467-52312486 None:intergenic 45.0%
TACCTACTTGCAACAACGCT+CGG + chr8_2:52312854-52312873 Msa1254250:intron 45.0%
!! GTTCTCGAGTTGAGTTTACC+TGG - chr8_2:52313497-52313516 None:intergenic 45.0%
GGTCAAACTCGGGTAAAATC+GGG - chr8_2:52313821-52313840 None:intergenic 45.0%
CGGTCAAACTCGGGTAAAAT+CGG - chr8_2:52313822-52313841 None:intergenic 45.0%
GAGTTAACTCGGTCAAACTC+GGG - chr8_2:52313831-52313850 None:intergenic 45.0%
CGAGTTAACTCGGTCAAACT+CGG - chr8_2:52313832-52313851 None:intergenic 45.0%
CCAAAATCGTGTCAACTTGG+AGG - chr8_2:52313900-52313919 None:intergenic 45.0%
!! CCTCCAAGTTGACACGATTT+TGG + chr8_2:52313897-52313916 Msa1254250:intron 45.0%
GGAACACTGCATAGCTTAGT+TGG + chr8_2:52313970-52313989 Msa1254250:intron 45.0%
CACTGCATAGCTTAGTTGGT+AGG + chr8_2:52313974-52313993 Msa1254250:intron 45.0%
GAAGGACGGTATCCTAGTTA+TGG + chr8_2:52314214-52314233 Msa1254250:intron 45.0%
AGGACGGTATCCTAGTTATG+GGG + chr8_2:52314216-52314235 Msa1254250:intron 45.0%
TCCGTAGATACCCCATAACT+AGG - chr8_2:52314229-52314248 None:intergenic 45.0%
TCTGATAGGTGACATCAGGT+TGG + chr8_2:52316125-52316144 Msa1254250:intron 45.0%
CTGATAGGTGACATCAGGTT+GGG + chr8_2:52316126-52316145 Msa1254250:intron 45.0%
TGCGAAAGAACGGAAAGAAG+TGG + chr8_2:52316403-52316422 Msa1254250:CDS 45.0%
GGAAAGAAGTGGAAATCCGT+TGG + chr8_2:52316414-52316433 Msa1254250:CDS 45.0%
GTGGAAATCCGTTGGGTTTA+TGG + chr8_2:52316422-52316441 Msa1254250:CDS 45.0%
ATCCGTTGGGTTTATGGTAG+GGG + chr8_2:52316428-52316447 Msa1254250:intron 45.0%
CTCAACCGCATGGTTTGATT+TGG + chr8_2:52316557-52316576 Msa1254250:intron 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - chr8_2:52316604-52316623 None:intergenic 45.0%
! TTGGATTAGATCGGTTGGTG+TGG - chr8_2:52317007-52317026 None:intergenic 45.0%
! GCAGTTTGGATTAGATCGGT+TGG - chr8_2:52317012-52317031 None:intergenic 45.0%
CCGATCTAATCCAAACTGCA+TGG + chr8_2:52317013-52317032 Msa1254250:intron 45.0%
CCAAACCAAACCATGCAGTT+TGG - chr8_2:52317026-52317045 None:intergenic 45.0%
!! CCAAACTGCATGGTTTGGTT+TGG + chr8_2:52317023-52317042 Msa1254250:intron 45.0%
!! CTGCATGGTTTGGTTTGGTT+TGG + chr8_2:52317028-52317047 Msa1254250:intron 45.0%
!! GTATGCGGTTTGGTTTCGTT+TGG - chr8_2:52317078-52317097 None:intergenic 45.0%
!! CCATAAATTAGGGGTGTTCG+CGG - chr8_2:52317155-52317174 None:intergenic 45.0%
!!! CTTTTAGATGGGTGCCGTTT+AGG + chr8_2:52317510-52317529 Msa1254250:intron 45.0%
CTAAAAGGCAAAGGCTATGG+AGG - chr8_2:52317540-52317559 None:intergenic 45.0%
! ATACGTTGGAGGGATTTTGG+TGG - chr8_2:52317901-52317920 None:intergenic 45.0%
! GGTATACGTTGGAGGGATTT+TGG - chr8_2:52317904-52317923 None:intergenic 45.0%
TACGACAGGTATACGTTGGA+GGG - chr8_2:52317911-52317930 None:intergenic 45.0%
ATACGACAGGTATACGTTGG+AGG - chr8_2:52317912-52317931 None:intergenic 45.0%
CCTGTCGTATTAAACACGCA+CGG + chr8_2:52317922-52317941 Msa1254250:intron 45.0%
TCGTATTAAACACGCACGGT+TGG + chr8_2:52317926-52317945 Msa1254250:intron 45.0%
CGTATTAAACACGCACGGTT+GGG + chr8_2:52317927-52317946 Msa1254250:intron 45.0%
GGGTTTCGGTAGAGAATGAA+TGG - chr8_2:52317994-52318013 None:intergenic 45.0%
! AATGGCGTTGAGATTGGAGA+TGG - chr8_2:52318065-52318084 None:intergenic 45.0%
! TTTAGGGTTTACCTTGGAGG+AGG - chr8_2:52318163-52318182 None:intergenic 45.0%
TCTGGGCATGGTTGTATTTC+AGG + chr8_2:52318698-52318717 Msa1254250:intron 45.0%
TTTCCATGGTGAAGGTGAAG+GGG - chr8_2:52318734-52318753 None:intergenic 45.0%
CTTTCCATGGTGAAGGTGAA+GGG - chr8_2:52318735-52318754 None:intergenic 45.0%
GATTGAGCTTTCCATGGTGA+AGG - chr8_2:52318742-52318761 None:intergenic 45.0%
GATCTCGATTGAGCTTTCCA+TGG - chr8_2:52318748-52318767 None:intergenic 45.0%
GAGGTCAATGCTACAAATCC+TGG + chr8_2:52319104-52319123 Msa1254250:CDS 45.0%
TCAAAGGAGGGAAAAGTGAG+TGG + chr8_2:52319191-52319210 Msa1254250:intron 45.0%
GGGAAAAGTGAGTGGCATAT+CGG + chr8_2:52319199-52319218 Msa1254250:intron 45.0%
ACAACGTTCAGCATCCTCAT+GGG - chr8_2:52319386-52319405 None:intergenic 45.0%
TACAACGTTCAGCATCCTCA+TGG - chr8_2:52319387-52319406 None:intergenic 45.0%
! TCCTCCCTTTTCTTAGAAGC+TGG + chr8_2:52320002-52320021 Msa1254250:intron 45.0%
! GAGGCCAGCTTCTAAGAAAA+GGG - chr8_2:52320009-52320028 None:intergenic 45.0%
! AGAGGCCAGCTTCTAAGAAA+AGG - chr8_2:52320010-52320029 None:intergenic 45.0%
CAACACCAGGACACTATCTT+GGG + chr8_2:52320235-52320254 Msa1254250:CDS 45.0%
ATTCAGATCGTAGGTCTCCA+AGG + chr8_2:52320553-52320572 Msa1254250:CDS 45.0%
TGTCTGGGCTATAAGGAGAA+CGG - chr8_2:52320668-52320687 None:intergenic 45.0%
GCCTATAGGATTTCGCTATG+TGG + chr8_2:52320932-52320951 Msa1254250:three_prime_UTR 45.0%
!!! TTTTAATTTTTTATGTTATA+TGG + chr8_2:52307691-52307710 Msa1254250:intron 5.0%
!!! TTTAATTTTTTATGTTATAT+GGG + chr8_2:52307692-52307711 Msa1254250:intron 5.0%
!! ATATATATATATATATATAG+GGG + chr8_2:52307870-52307889 Msa1254250:intron 5.0%
!! AATATAATCATTATTATATA+AGG - chr8_2:52308900-52308919 None:intergenic 5.0%
!!! AAATTTTGAAATTTTTTTTA+AGG + chr8_2:52309639-52309658 Msa1254250:intron 5.0%
!!! TGTTAAATTTTTATATTTTA+AGG - chr8_2:52311110-52311129 None:intergenic 5.0%
!! TATATATATATATATATATG+GGG + chr8_2:52312989-52313008 Msa1254250:intron 5.0%
!!! TTTTAATTTGATTTTAATAT+TGG + chr8_2:52316955-52316974 Msa1254250:intron 5.0%
GATACCATCATTGGGCCTTC+TGG + chr8_2:52307380-52307399 Msa1254250:CDS 50.0%
GGGTGTCTGAGTTTCGAACT+CGG - chr8_2:52307896-52307915 None:intergenic 50.0%
TCGAAAATCTAGCCCGTGCT+TGG + chr8_2:52308328-52308347 Msa1254250:intron 50.0%
CGAAAGGACGAAAATACCCC+TGG - chr8_2:52309676-52309695 None:intergenic 50.0%
TCACCAAAATGGCACGCGAA+AGG - chr8_2:52309692-52309711 None:intergenic 50.0%
GAATCAGAGGCGATCACATG+AGG - chr8_2:52311495-52311514 None:intergenic 50.0%
GATGTGTACCTCCTCATCGT+CGG + chr8_2:52311565-52311584 Msa1254250:intron 50.0%
AAAGAGCCTCCACACTTCAG+AGG - chr8_2:52311669-52311688 None:intergenic 50.0%
!! CGTCCATATGCTCTAGAGCA+TGG + chr8_2:52311743-52311762 Msa1254250:intron 50.0%
!! CCATATGCTCTAGAGCATGG+GGG + chr8_2:52311746-52311765 Msa1254250:intron 50.0%
GACTACTTTGCCTCGAGTGT+GGG - chr8_2:52312511-52312530 None:intergenic 50.0%
TGACTACTTTGCCTCGAGTG+TGG - chr8_2:52312512-52312531 None:intergenic 50.0%
CGAGGCAAAGTAGTCACTAG+TGG + chr8_2:52312516-52312535 Msa1254250:intron 50.0%
! TACCTCAACTCGTTTTGCCC+AGG + chr8_2:52313476-52313495 Msa1254250:intron 50.0%
TACCTGGGCAAAACGAGTTG+AGG - chr8_2:52313481-52313500 None:intergenic 50.0%
! GTGAATAAGTGGGGCGTCTT+GGG - chr8_2:52314038-52314057 None:intergenic 50.0%
! AGTGAATAAGTGGGGCGTCT+TGG - chr8_2:52314039-52314058 None:intergenic 50.0%
TTATAGTCGATGGGACCCGT+GGG - chr8_2:52314320-52314339 None:intergenic 50.0%
ATTATAGTCGATGGGACCCG+TGG - chr8_2:52314321-52314340 None:intergenic 50.0%
CACCCCTACCATAAACCCAA+CGG - chr8_2:52316433-52316452 None:intergenic 50.0%
CCGCGAACACCCCTAATTTA+TGG + chr8_2:52317152-52317171 Msa1254250:intron 50.0%
GCTATGGAGGGAGACCTAAA+CGG - chr8_2:52317527-52317546 None:intergenic 50.0%
!! GTTGGAGGGATTTTGGTGGA+AGG - chr8_2:52317897-52317916 None:intergenic 50.0%
CCGTGCGTGTTTAATACGAC+AGG - chr8_2:52317925-52317944 None:intergenic 50.0%
GCTTTCCATGGTGAAGGTGA+AGG - chr8_2:52318736-52318755 None:intergenic 50.0%
CGAGATCTAGATCAAGGTCG+AGG + chr8_2:52318761-52318780 Msa1254250:CDS 50.0%
CGAGGTCTGTTCCAAGACAA+AGG + chr8_2:52318779-52318798 Msa1254250:CDS 50.0%
! TCGGATCTTGGCCTTTGTCT+TGG - chr8_2:52318793-52318812 None:intergenic 50.0%
CAAGGTCTCGAAGTCCTGTA+AGG + chr8_2:52318975-52318994 Msa1254250:CDS 50.0%
GTCTCGAAGTCCTGTAAGGT+TGG + chr8_2:52318979-52318998 Msa1254250:intron 50.0%
GGTGACCCTTGAAGATAGAC+CGG - chr8_2:52319147-52319166 None:intergenic 50.0%
ATGGTCCTCTAGGTCTCTGT+CGG - chr8_2:52319168-52319187 None:intergenic 50.0%
! TTCGGTTGGTTGCTTCCTCT+TGG + chr8_2:52319253-52319272 Msa1254250:intron 50.0%
! GCCAGCTTCTAAGAAAAGGG+AGG - chr8_2:52320006-52320025 None:intergenic 50.0%
CCAAGATAGTGTCCTGGTGT+TGG - chr8_2:52320237-52320256 None:intergenic 50.0%
CCAACACCAGGACACTATCT+TGG + chr8_2:52320234-52320253 Msa1254250:CDS 50.0%
TTCAGCCCAAGATAGTGTCC+TGG - chr8_2:52320243-52320262 None:intergenic 50.0%
GACTTTCGTGGTGATCATCG+TGG + chr8_2:52320441-52320460 Msa1254250:CDS 50.0%
GACTATCGCAGTGACTATCG+CGG + chr8_2:52320465-52320484 Msa1254250:CDS 50.0%
AACGCTGTGGTGAATGATCG+TGG - chr8_2:52320599-52320618 None:intergenic 50.0%
GCTATAAGGAGAACGGGGAA+TGG - chr8_2:52320661-52320680 None:intergenic 50.0%
TCTGGGCTATAAGGAGAACG+GGG - chr8_2:52320666-52320685 None:intergenic 50.0%
GTCTGGGCTATAAGGAGAAC+GGG - chr8_2:52320667-52320686 None:intergenic 50.0%
GTTCTCCTTATAGCCCAGAC+AGG + chr8_2:52320667-52320686 Msa1254250:CDS 50.0%
TACCTCCTGTCTGGGCTATA+AGG - chr8_2:52320675-52320694 None:intergenic 50.0%
TCGCTATGTGGAGCCTTTGT+TGG + chr8_2:52320944-52320963 Msa1254250:three_prime_UTR 50.0%
GGAGCCTTTGTTGGCATCTA+AGG + chr8_2:52320953-52320972 Msa1254250:three_prime_UTR 50.0%
TGCTCCAGAAGGCCCAATGA+TGG - chr8_2:52307387-52307406 None:intergenic 55.0%
!! CCTGTGTTGCTTGCTCCAGA+AGG - chr8_2:52307398-52307417 None:intergenic 55.0%
!! CCTTCTGGAGCAAGCAACAC+AGG + chr8_2:52307395-52307414 Msa1254250:CDS 55.0%
TGGAGCAAGCAACACAGGTG+TGG + chr8_2:52307400-52307419 Msa1254250:intron 55.0%
AATCTAGCCCGTGCTTGGCA+CGG + chr8_2:52308333-52308352 Msa1254250:intron 55.0%
ATGTAGACCCGTGCCAAGCA+CGG - chr8_2:52308344-52308363 None:intergenic 55.0%
!!! CGTCCTTTCGCGTGCCATTT+TGG + chr8_2:52309686-52309705 Msa1254250:intron 55.0%
! CAGAGGCCTTTCTGAAAGCG+AGG + chr8_2:52310904-52310923 Msa1254250:intron 55.0%
TGGGTAAACCGACGATGAGG+AGG - chr8_2:52311576-52311595 None:intergenic 55.0%
GCTTGGGTAAACCGACGATG+AGG - chr8_2:52311579-52311598 None:intergenic 55.0%
!! CCCCCATGCTCTAGAGCATA+TGG - chr8_2:52311749-52311768 None:intergenic 55.0%
TGGGATATGTCCCACACTCG+AGG + chr8_2:52312498-52312517 Msa1254250:intron 55.0%
! GACCGAGCGTTGTTGCAAGT+AGG - chr8_2:52312859-52312878 None:intergenic 55.0%
!! AATTAGGGGTGTTCGCGGTG+CGG - chr8_2:52317150-52317169 None:intergenic 55.0%
! AGGCTGATTCACCTCCTCCA+AGG + chr8_2:52318149-52318168 Msa1254250:intron 55.0%
TATTAACCTGCCACGGCCTC+TGG - chr8_2:52318818-52318837 None:intergenic 55.0%
CCACGAGAAATTCGGGTACG+TGG - chr8_2:52319340-52319359 None:intergenic 55.0%
CCACGTACCCGAATTTCTCG+TGG + chr8_2:52319337-52319356 Msa1254250:CDS 55.0%
CGTGCAAGAACTCCAACACC+AGG + chr8_2:52320222-52320241 Msa1254250:CDS 55.0%
CACTGCGATGATCACCACGA+GGG - chr8_2:52320386-52320405 None:intergenic 55.0%
TCACTGCGATGATCACCACG+AGG - chr8_2:52320387-52320406 None:intergenic 55.0%
GATCATCGCAGTGACCATCG+TGG + chr8_2:52320393-52320412 Msa1254250:CDS 55.0%
GACTTTCGTGGTGACCATCG+TGG + chr8_2:52320417-52320436 Msa1254250:CDS 55.0%
GACCATCGTGGTGACTTTCG+TGG + chr8_2:52320429-52320448 Msa1254250:CDS 55.0%
CACCACGAAAGTCACCACGA+TGG - chr8_2:52320434-52320453 None:intergenic 55.0%
GACTATCGCGGTGACTATCG+CGG + chr8_2:52320477-52320496 Msa1254250:CDS 55.0%
GATTCCTACCCCGATCACCT+CGG - chr8_2:52320509-52320528 None:intergenic 55.0%
GGTAGGAATCGTGGTGGTTC+TGG + chr8_2:52320519-52320538 Msa1254250:CDS 55.0%
GTGAATGATCGTGGCCTCCA+CGG - chr8_2:52320590-52320609 None:intergenic 55.0%
CACAGCGTTCACCCTACGTT+GGG + chr8_2:52320610-52320629 Msa1254250:CDS 55.0%
CTCCTAGACCTCCCAACGTA+GGG - chr8_2:52320624-52320643 None:intergenic 55.0%
CTACGTTGGGAGGTCTAGGA+GGG + chr8_2:52320623-52320642 Msa1254250:CDS 55.0%
GGTCTAGGAGGGAGAGATCT+AGG + chr8_2:52320634-52320653 Msa1254250:CDS 55.0%
CTCCTTATAGCCCAGACAGG+AGG + chr8_2:52320670-52320689 Msa1254250:CDS 55.0%
CAGCAGCATACCTCCTGTCT+GGG - chr8_2:52320683-52320702 None:intergenic 55.0%
! GGAGGTATGCTGCTGGATCT+AGG + chr8_2:52320688-52320707 Msa1254250:CDS 55.0%
GCTGCTGGATCTAGGTGAGA+TGG + chr8_2:52320696-52320715 Msa1254250:exon 55.0%
ATCTAGCCCGTGCTTGGCAC+GGG + chr8_2:52308334-52308353 Msa1254250:intron 60.0%
TGTAGACCCGTGCCAAGCAC+GGG - chr8_2:52308343-52308362 None:intergenic 60.0%
GGTCCCCTTCACCTTCACCA+TGG + chr8_2:52318728-52318747 Msa1254250:CDS 60.0%
AGGCCAAGATCCGACTCCAG+AGG + chr8_2:52318799-52318818 Msa1254250:CDS 60.0%
GGTCACCGACAGAGACCTAG+AGG + chr8_2:52319160-52319179 Msa1254250:CDS 60.0%
GACCATCGTGGCGACTTTCG+TGG + chr8_2:52320405-52320424 Msa1254250:CDS 60.0%
CACCACGAAAGTCGCCACGA+TGG - chr8_2:52320410-52320429 None:intergenic 60.0%
GACTATCGCGGTGACTACCG+AGG + chr8_2:52320489-52320508 Msa1254250:CDS 60.0%
GCGGTGACTACCGAGGTGAT+CGG + chr8_2:52320496-52320515 Msa1254250:CDS 60.0%
CGGTGACTACCGAGGTGATC+GGG + chr8_2:52320497-52320516 Msa1254250:CDS 60.0%
GGTGACTACCGAGGTGATCG+GGG + chr8_2:52320498-52320517 Msa1254250:CDS 60.0%
ACTACCGAGGTGATCGGGGT+AGG + chr8_2:52320502-52320521 Msa1254250:CDS 60.0%
GGTGATCGGGGTAGGAATCG+TGG + chr8_2:52320510-52320529 Msa1254250:CDS 60.0%
GATCGGGGTAGGAATCGTGG+TGG + chr8_2:52320513-52320532 Msa1254250:CDS 60.0%
CCACGGTATGGTGAACGCCT+TGG - chr8_2:52320573-52320592 None:intergenic 60.0%
! CCAAGGCGTTCACCATACCG+TGG + chr8_2:52320570-52320589 Msa1254250:CDS 60.0%
AGGCGTTCACCATACCGTGG+AGG + chr8_2:52320573-52320592 Msa1254250:CDS 60.0%
TGATCGTGGCCTCCACGGTA+TGG - chr8_2:52320585-52320604 None:intergenic 60.0%
CCAACGTAGGGTGAACGCTG+TGG - chr8_2:52320612-52320631 None:intergenic 60.0%
CCACAGCGTTCACCCTACGT+TGG + chr8_2:52320609-52320628 Msa1254250:CDS 60.0%
AGCGTTCACCCTACGTTGGG+AGG + chr8_2:52320613-52320632 Msa1254250:CDS 60.0%
CACCCTACGTTGGGAGGTCT+AGG + chr8_2:52320619-52320638 Msa1254250:CDS 60.0%
CCTCCTAGACCTCCCAACGT+AGG - chr8_2:52320625-52320644 None:intergenic 60.0%
CCTACGTTGGGAGGTCTAGG+AGG + chr8_2:52320622-52320641 Msa1254250:CDS 60.0%
CCAGCAGCATACCTCCTGTC+TGG - chr8_2:52320684-52320703 None:intergenic 60.0%
! CCAGACAGGAGGTATGCTGC+TGG + chr8_2:52320681-52320700 Msa1254250:CDS 60.0%
!! CGGCCTCTGGAGTCGGATCT+TGG - chr8_2:52318805-52318824 None:intergenic 65.0%
AGATCCGACTCCAGAGGCCG+TGG + chr8_2:52318805-52318824 Msa1254250:CDS 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr8_2:52317145-52317164 None:intergenic 70.0%
!! CCTGCCACGGCCTCTGGAGT+CGG - chr8_2:52318812-52318831 None:intergenic 70.0%
CCGACTCCAGAGGCCGTGGC+AGG + chr8_2:52318809-52318828 Msa1254250:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 52307363 52321093 52307363 ID=Msa1254250;Name=Msa1254250
chr8_2 mRNA 52307363 52321093 52307363 ID=Msa1254250-mRNA-1;Parent=Msa1254250;Name=Msa1254250-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.75|0.77|0.77|1|1|9|380|315
chr8_2 exon 52307363 52307416 52307363 ID=Msa1254250-mRNA-1:exon:16020;Parent=Msa1254250-mRNA-1
chr8_2 exon 52316360 52316443 52316360 ID=Msa1254250-mRNA-1:exon:16021;Parent=Msa1254250-mRNA-1
chr8_2 exon 52318151 52318170 52318151 ID=Msa1254250-mRNA-1:exon:16022;Parent=Msa1254250-mRNA-1
chr8_2 exon 52318720 52318830 52318720 ID=Msa1254250-mRNA-1:exon:16023;Parent=Msa1254250-mRNA-1
chr8_2 exon 52318973 52318996 52318973 ID=Msa1254250-mRNA-1:exon:16024;Parent=Msa1254250-mRNA-1
chr8_2 exon 52319103 52319205 52319103 ID=Msa1254250-mRNA-1:exon:16025;Parent=Msa1254250-mRNA-1
chr8_2 exon 52319310 52319459 52319310 ID=Msa1254250-mRNA-1:exon:16026;Parent=Msa1254250-mRNA-1
chr8_2 exon 52320210 52320279 52320210 ID=Msa1254250-mRNA-1:exon:16027;Parent=Msa1254250-mRNA-1
chr8_2 exon 52320382 52321093 52320382 ID=Msa1254250-mRNA-1:exon:16028;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52307363 52307416 52307363 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52316360 52316443 52316360 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52318151 52318170 52318151 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52318720 52318830 52318720 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52318973 52318996 52318973 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52319103 52319205 52319103 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52319310 52319459 52319310 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52320210 52320279 52320210 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 CDS 52320382 52320713 52320382 ID=Msa1254250-mRNA-1:cds;Parent=Msa1254250-mRNA-1
chr8_2 three_prime_UTR 52320714 52321093 52320714 ID=Msa1254250-mRNA-1:three_prime_utr;Parent=Msa1254250-mRNA-1
Gene Sequence

>Msa1254250

ATGTTGAACCGAGATATGATACCATCATTGGGCCTTCTGGAGCAAGCAACACAGGAAGGTCATGTTAATGATTTTCTTTCTGATATTGATGTGTCTTTGCGAAAGAACGGAAAGAAGTGGAAATCCGTTGGGTTTATGGCTGATTCACCTCCTCCAAGGAATTCAAGGTCCCCTTCACCTTCACCATGGAAAGCTCAATCGAGATCTAGATCAAGGTCGAGGTCTGTTCCAAGACAAAGGCCAAGATCCGACTCCAGAGGCCGTGGCAGATCAAGGTCTCGAAGTCCTGTAAGGGAGGTCAATGCTACAAATCCTGGTAATACACTATATGTTACCGGTCTATCTTCAAGGGTCACCGACAGAGACCTAGAGGACCATTTTTCAAAGGAGGGAAAAGTTGCTTCATGTTTTCTTGTGGTGGAGCCACGTACCCGAATTTCTCGTGGTTTTGCTTTTGTTACAATGGATTCCCATGAGGATGCTGAACGTTGTATCAAGCATCTCAATCAATCAGTTTTAGAGGGTCGTTACATCACTGTAGAACGGTCAAGAAGAAAGCGTGCAAGAACTCCAACACCAGGACACTATCTTGGGCTGAAAAATACTAGAGACTATGGCCCTCGTGGTGATCATCGCAGTGACCATCGTGGCGACTTTCGTGGTGACCATCGTGGTGACTTTCGTGGTGATCATCGTGGCGACTATCGCAGTGACTATCGCGGTGACTATCGCGGTGACTACCGAGGTGATCGGGGTAGGAATCGTGGTGGTTCTGGTCGTGCAGATTATTCAGATCGTAGGTCTCCAAGGCGTTCACCATACCGTGGAGGCCACGATCATTCACCACAGCGTTCACCCTACGTTGGGAGGTCTAGGAGGGAGAGATCTAGGTCCATTCCCCGTTCTCCTTATAGCCCAGACAGGAGGTATGCTGCTGGATCTAGGTGA

Protein sequence

>Msa1254250

MLNRDMIPSLGLLEQATQEGHVNDFLSDIDVSLRKNGKKWKSVGFMADSPPPRNSRSPSPSPWKAQSRSRSRSRSVPRQRPRSDSRGRGRSRSRSPVREVNATNPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAERCIKHLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKNTRDYGPRGDHRSDHRGDFRGDHRGDFRGDHRGDYRSDYRGDYRGDYRGDRGRNRGGSGRADYSDRRSPRRSPYRGGHDHSPQRSPYVGRSRRERSRSIPRSPYSPDRRYAAGSR*