AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0757500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0757500 MtrunA17_Chr5g0403591 100.000 183 0 0 1 183 1 183 2.40e-138 383
Msa0757500 MtrunA17_Chr4g0037011 38.971 136 80 2 33 166 5 139 1.82e-28 103
Msa0757500 MtrunA17_Chr1g0154011 36.765 136 83 2 33 166 5 139 4.06e-27 100
Msa0757500 MtrunA17_Chr5g0432831 36.765 136 83 2 33 166 5 139 2.48e-26 98.2
Msa0757500 MtrunA17_Chr3g0108261 36.765 136 83 2 33 166 5 139 2.64e-26 98.2
Msa0757500 MtrunA17_Chr7g0275361 36.029 136 84 2 33 166 5 139 5.68e-26 97.1
Msa0757500 MtrunA17_Chr8g0369311 35.766 137 83 3 33 166 61 195 2.94e-25 97.1
Msa0757500 MtrunA17_Chr2g0316201 40.000 105 62 1 54 157 30 134 1.39e-21 85.9
Msa0757500 MtrunA17_Chr2g0316211 40.000 105 62 1 54 157 30 134 2.09e-21 85.5
Msa0757500 MtrunA17_Chr4g0060351 27.778 144 103 1 33 175 8 151 5.21e-21 84.3
Msa0757500 MtrunA17_Chr8g0362321 26.389 144 105 1 33 175 8 151 2.27e-20 82.8
Msa0757500 MtrunA17_Chr4g0038891 32.090 134 87 2 33 162 36 169 4.57e-18 77.4
Msa0757500 MtrunA17_Chr5g0396451 38.824 85 52 0 69 153 73 157 6.61e-18 77.0
Msa0757500 MtrunA17_Chr3g0139901 30.075 133 89 3 29 157 3 135 1.12e-17 75.9
Msa0757500 MtrunA17_Chr1g0199951 33.962 106 70 0 51 156 65 170 2.97e-17 75.5
Msa0757500 MtrunA17_Chr4g0059291 33.043 115 74 3 56 167 27 141 6.59e-17 74.7
Msa0757500 MtrunA17_Chr4g0031181 30.833 120 70 1 63 169 40 159 1.13e-15 70.9
Msa0757500 MtrunA17_Chr8g0348701 34.615 104 64 4 67 167 39 141 9.64e-15 68.9
Msa0757500 MtrunA17_Chr8g0387131 25.850 147 98 3 23 167 4 141 1.79e-14 68.2
Msa0757500 MtrunA17_Chr3g0131871 32.743 113 74 2 56 166 30 142 2.28e-14 68.2
Msa0757500 MtrunA17_Chr2g0328001 30.000 120 71 1 63 169 40 159 4.35e-14 66.6
Msa0757500 MtrunA17_Chr4g0053191 29.915 117 79 2 53 166 33 149 1.95e-13 64.7
Msa0757500 MtrunA17_Chr8g0378601 30.709 127 82 3 23 147 16 138 3.78e-13 64.3
Msa0757500 MtrunA17_Chr7g0254701 33.684 95 63 0 72 166 54 148 1.15e-12 64.3
Msa0757500 MtrunA17_Chr5g0401831 28.571 119 82 2 52 167 32 150 1.26e-12 62.8
Msa0757500 MtrunA17_Chr2g0313441 87.500 32 4 0 5 36 23 54 2.99e-12 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0757500 AT4G36800.2 85.870 184 25 1 1 183 1 184 1.91e-120 338
Msa0757500 AT4G36800.1 85.870 184 25 1 1 183 1 184 1.91e-120 338
Msa0757500 AT2G18600.1 83.243 185 29 1 1 183 1 185 1.67e-113 320
Msa0757500 AT2G18600.2 83.243 185 29 1 1 183 1 185 1.67e-113 320
Msa0757500 AT5G56150.1 36.029 136 84 2 33 166 5 139 1.12e-26 99.4
Msa0757500 AT3G08690.2 37.500 136 82 2 33 166 5 139 3.14e-26 98.2
Msa0757500 AT3G08690.1 37.500 136 82 2 33 166 5 139 3.14e-26 98.2
Msa0757500 AT4G27960.1 36.765 136 83 2 33 166 5 139 3.35e-26 98.2
Msa0757500 AT2G16740.1 36.765 136 83 2 33 166 5 139 3.50e-26 98.2
Msa0757500 AT5G41700.4 35.294 136 86 1 33 166 5 140 3.91e-26 97.8
Msa0757500 AT1G64230.2 36.029 136 84 2 33 166 5 139 5.62e-26 97.4
Msa0757500 AT1G64230.1 36.029 136 84 2 33 166 5 139 5.62e-26 97.4
Msa0757500 AT5G53300.2 36.029 136 84 2 33 166 5 139 9.93e-26 97.1
Msa0757500 AT5G53300.4 36.029 136 84 2 33 166 5 139 9.93e-26 97.1
Msa0757500 AT5G53300.1 36.029 136 84 2 33 166 5 139 9.93e-26 97.1
Msa0757500 AT4G27960.2 36.765 136 83 2 33 166 35 169 1.83e-25 97.1
Msa0757500 AT1G64230.3 34.028 144 85 2 33 166 5 148 2.91e-25 95.9
Msa0757500 AT5G41700.5 35.294 136 85 2 33 166 5 139 6.46e-25 94.7
Msa0757500 AT5G41700.2 35.294 136 85 2 33 166 5 139 6.46e-25 94.7
Msa0757500 AT5G41700.1 35.294 136 85 2 33 166 5 139 6.46e-25 94.7
Msa0757500 AT3G08700.2 34.783 138 86 3 33 167 5 141 1.20e-24 94.0
Msa0757500 AT3G08700.1 34.783 138 86 3 33 167 5 141 1.20e-24 94.0
Msa0757500 AT1G64230.5 38.393 112 68 1 56 166 70 181 2.72e-24 94.4
Msa0757500 AT1G64230.4 38.393 112 68 1 56 166 70 181 2.72e-24 94.4
Msa0757500 AT5G56150.2 39.815 108 61 3 33 138 5 110 1.34e-21 85.1
Msa0757500 AT1G78870.2 40.000 105 62 1 54 157 30 134 2.18e-21 85.9
Msa0757500 AT1G16890.2 39.048 105 63 1 54 157 30 134 7.45e-21 84.3
Msa0757500 AT1G16890.3 39.048 105 63 1 54 157 39 143 1.20e-20 84.3
Msa0757500 AT1G16890.1 41.837 98 56 1 61 157 4 101 1.50e-20 82.8
Msa0757500 AT1G78870.4 41.837 98 56 1 61 157 4 101 1.65e-20 82.8
Msa0757500 AT2G02760.1 27.083 144 104 1 33 175 8 151 1.73e-20 83.6
Msa0757500 AT2G02760.2 27.083 144 104 1 33 175 8 151 1.73e-20 83.6
Msa0757500 AT2G02760.4 27.083 144 104 1 33 175 8 151 1.73e-20 83.6
Msa0757500 AT2G02760.3 27.083 144 104 1 33 175 8 151 1.73e-20 83.6
Msa0757500 AT1G14400.1 27.083 144 104 1 33 175 8 151 6.48e-20 82.0
Msa0757500 AT1G14400.2 27.083 144 104 1 33 175 8 151 6.48e-20 82.0
Msa0757500 AT5G53300.3 37.500 104 62 2 33 134 5 107 6.25e-19 78.2
Msa0757500 AT1G78870.1 41.414 99 56 2 61 157 4 102 9.39e-19 78.2
Msa0757500 AT5G62540.1 27.273 143 103 1 33 174 8 150 1.67e-18 78.2
Msa0757500 AT3G20060.2 37.500 88 55 0 69 156 32 119 6.22e-18 76.3
Msa0757500 AT3G20060.1 37.500 88 55 0 69 156 77 164 9.82e-18 77.0
Msa0757500 AT3G13550.1 32.061 131 86 2 17 145 24 153 1.02e-17 77.0
Msa0757500 AT3G13550.2 32.540 126 82 2 17 140 24 148 1.20e-17 76.6
Msa0757500 AT5G41700.3 38.384 99 58 2 33 129 5 102 1.51e-17 75.5
Msa0757500 AT5G25760.1 30.827 133 88 3 29 157 3 135 1.66e-17 75.9
Msa0757500 AT5G25760.2 30.827 133 88 3 29 157 3 135 1.66e-17 75.9
Msa0757500 AT1G36340.2 34.821 112 72 1 56 166 34 145 2.25e-17 75.5
Msa0757500 AT1G36340.1 34.821 112 72 1 56 166 34 145 2.25e-17 75.5
Msa0757500 AT5G41340.1 38.462 104 60 4 67 167 39 141 1.10e-16 74.3
Msa0757500 AT1G50490.1 36.364 88 56 0 69 156 76 163 1.12e-16 74.3
Msa0757500 AT1G63800.1 37.500 104 61 4 67 167 39 141 1.80e-16 73.9
Msa0757500 AT1G63800.2 37.500 104 61 4 67 167 24 126 2.39e-16 73.2
Msa0757500 AT5G41340.2 36.000 100 62 2 70 167 7 106 5.28e-16 71.6
Msa0757500 AT1G78870.3 43.590 78 43 1 54 130 30 107 5.67e-16 70.5
Msa0757500 AT3G24515.1 33.607 122 73 2 53 166 36 157 1.00e-15 74.3
Msa0757500 AT5G50870.1 35.417 96 61 1 72 166 47 142 1.13e-15 72.0
Msa0757500 AT2G46030.5 34.783 115 72 3 56 167 27 141 3.24e-15 70.5
Msa0757500 AT2G46030.1 34.783 115 72 3 56 167 27 141 3.24e-15 70.5
Msa0757500 AT3G24515.3 35.577 104 63 1 67 166 79 182 4.84e-15 72.4
Msa0757500 AT2G46030.4 34.783 115 72 3 56 167 30 144 6.02e-15 69.7
Msa0757500 AT2G46030.2 34.783 115 72 3 56 167 30 144 6.02e-15 69.7
Msa0757500 AT2G46030.3 35.088 114 71 3 56 166 99 212 7.35e-15 70.9
Msa0757500 AT5G50870.2 38.667 75 45 1 72 145 47 121 5.05e-14 67.8
Msa0757500 AT3G57870.1 30.769 117 78 2 53 166 34 150 8.80e-14 66.2
Msa0757500 AT5G59300.1 29.167 120 72 1 63 169 40 159 4.92e-13 64.3
Msa0757500 AT3G55380.1 29.412 119 71 1 64 169 42 160 5.07e-13 64.3
Msa0757500 AT3G46460.1 28.333 120 73 1 63 169 40 159 5.87e-13 63.9
Msa0757500 AT5G05080.2 33.684 95 63 0 72 166 54 148 8.94e-13 65.1
Msa0757500 AT5G05080.3 33.684 95 63 0 72 166 54 148 8.94e-13 65.1
Msa0757500 AT5G05080.1 33.684 95 63 0 72 166 54 148 8.94e-13 65.1
Msa0757500 AT5G05080.4 33.684 95 63 0 72 166 54 148 8.94e-13 65.1
Msa0757500 AT3G46460.3 27.523 109 66 1 74 169 9 117 8.33e-11 57.4
Msa0757500 AT3G46460.2 27.523 109 66 1 74 169 9 117 8.33e-11 57.4

Find 65 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCTTCCAAGTCAATATT+TGG 0.142980 5_2:-12388211 None:intergenic
TATTCTAAACAATCAGAAAA+TGG 0.229500 5_2:+12388767 Msa0757500:three_prime_UTR
TTCAGGGGATCCTCGTAATT+TGG 0.241596 5_2:-12388415 None:intergenic
CAGCAGCGGCATCATGATTC+AGG 0.258270 5_2:-12388432 None:intergenic
ACATTAGATTCAAACATCTT+TGG 0.268686 5_2:-12388469 None:intergenic
GATGTAACTTATGTGCTTTA+TGG 0.270626 5_2:+12388731 Msa0757500:three_prime_UTR
CCAGCACTTTGCTTCTTAAC+AGG 0.282485 5_2:-12385972 None:intergenic
AGATGACAGTGTTTATATTA+AGG 0.283684 5_2:-12388273 None:intergenic
CTTAACAGGTACTCCATTAC+TGG 0.300967 5_2:-12385958 None:intergenic
TAGATGCGTTTGGTGGTCTA+AGG 0.327340 5_2:-12388686 None:intergenic
ACATCAACATTCCAATTGTT+TGG 0.337427 5_2:-12388713 None:intergenic
AATATAAACACTGTCATCTA+TGG 0.349971 5_2:+12388277 Msa0757500:CDS
TTCAATCTTCTCAATCAATC+AGG 0.362380 5_2:+12385011 Msa0757500:five_prime_UTR
TTTGTCTTGCACTTCACCTT+GGG 0.370105 5_2:-12388063 None:intergenic
CATTGATAATATATTTCAAA+AGG 0.384723 5_2:-12388574 None:intergenic
TTTCTTGGTGGAGGAGCATC+AGG 0.389923 5_2:+12388657 Msa0757500:three_prime_UTR
GGGTGCTTCATGTGGATAGA+TGG 0.399776 5_2:-12388043 None:intergenic
GGCAATGTCTGGTGGGTATG+TGG 0.402485 5_2:+12388498 Msa0757500:CDS
CTTTGTCTTGCACTTCACCT+TGG 0.407733 5_2:-12388064 None:intergenic
CATCAGGTCATCTTTGCCAT+TGG 0.416464 5_2:-12387717 None:intergenic
ATCAGGTCATCTTTGCCATT+GGG 0.429309 5_2:-12387716 None:intergenic
GCATCTAAAAGCCAAACAAT+TGG 0.433067 5_2:+12388702 Msa0757500:three_prime_UTR
TCAAAACTTCGAAGTTCATC+AGG 0.454455 5_2:-12387733 None:intergenic
AATTGCATGGTGCAAGACTT+TGG 0.456157 5_2:-12387692 None:intergenic
ATTCTAAACAATCAGAAAAT+GGG 0.468228 5_2:+12388768 Msa0757500:three_prime_UTR
ATTGATAATATATTTCAAAA+GGG 0.474553 5_2:-12388573 None:intergenic
TACAAGTAATATCCATCATC+GGG 0.483744 5_2:-12387761 None:intergenic
GAGCATGGTTTACATACAGC+GGG 0.483927 5_2:-12388536 None:intergenic
GATTAAACTATTTAAAGTAA+AGG 0.497569 5_2:+12385908 Msa0757500:CDS
TTCACCTTGGGTGCTTCATG+TGG 0.501905 5_2:-12388051 None:intergenic
CATCCAAATATTGACTTGGA+AGG 0.507990 5_2:+12388208 Msa0757500:CDS
GCAATGTCTGGTGGGTATGT+GGG 0.513890 5_2:+12388499 Msa0757500:CDS
ACAGTGTTTATATTAAGGAC+AGG 0.514717 5_2:-12388268 None:intergenic
TCAACATCTTAAGAGAAGAC+TGG 0.523814 5_2:+12388242 Msa0757500:CDS
GGCATGGAAGTTGTTGAGCA+TGG 0.530108 5_2:-12388551 None:intergenic
TTACAAGTAATATCCATCAT+CGG 0.536160 5_2:-12387762 None:intergenic
TGGCTTGTATCATCTCTTCA+CGG 0.539377 5_2:+12388297 Msa0757500:CDS
AGCAGCGGCATCATGATTCA+GGG 0.539634 5_2:-12388431 None:intergenic
CTACCATCCAAATATTGACT+TGG 0.541780 5_2:+12388204 Msa0757500:CDS
AATATATTTCAAAAGGGGCA+TGG 0.542808 5_2:-12388567 None:intergenic
ATAGATGGGAGACACATTGA+AGG 0.544925 5_2:-12388028 None:intergenic
AAATATATTATCAATGCCCA+TGG 0.546894 5_2:+12388581 Msa0757500:three_prime_UTR
CTTCCAAGTCAATATTTGGA+TGG 0.548559 5_2:-12388207 None:intergenic
CAAGCTGAAAATGCCAGTAA+TGG 0.548896 5_2:+12385945 Msa0757500:CDS
TTGATAATATATTTCAAAAG+GGG 0.567269 5_2:-12388572 None:intergenic
TTTGCCATTGGGAAATTGCA+TGG 0.574210 5_2:-12387705 None:intergenic
CCTGTTAAGAAGCAAAGTGC+TGG 0.575364 5_2:+12385972 Msa0757500:CDS
AATGTGAGGAGGGCAATGTC+TGG 0.586922 5_2:+12388487 Msa0757500:CDS
GGTGCTTCATGTGGATAGAT+GGG 0.590678 5_2:-12388042 None:intergenic
GTGAGGAGGGCAATGTCTGG+TGG 0.597624 5_2:+12388490 Msa0757500:CDS
GTTTGAATCTAATGTGAGGA+GGG 0.602029 5_2:+12388477 Msa0757500:CDS
TGCACCATGCAATTTCCCAA+TGG 0.605830 5_2:+12387701 Msa0757500:CDS
CTATCCACATGAAGCACCCA+AGG 0.621344 5_2:+12388047 Msa0757500:CDS
CAATCAGAAAATGGGTTCAG+CGG 0.622698 5_2:+12388776 Msa0757500:three_prime_UTR
GGCGAGTTGCGTCTTCACAA+AGG 0.628980 5_2:+12385993 Msa0757500:CDS
TGAGGAGGGCAATGTCTGGT+GGG 0.629398 5_2:+12388491 Msa0757500:CDS
CAAGGTGAAGTGCAAGACAA+AGG 0.630470 5_2:+12388065 Msa0757500:CDS
TGTTTGAATCTAATGTGAGG+AGG 0.637414 5_2:+12388476 Msa0757500:CDS
GCAGCGGCATCATGATTCAG+GGG 0.671229 5_2:-12388430 None:intergenic
TGAGCATGGTTTACATACAG+CGG 0.671953 5_2:-12388537 None:intergenic
GCATGGTTTACATACAGCGG+GGG 0.678401 5_2:-12388534 None:intergenic
AGATGTTTGAATCTAATGTG+AGG 0.682109 5_2:+12388473 Msa0757500:CDS
TGTGCAGGAGCCAAATTACG+AGG 0.709133 5_2:+12388405 Msa0757500:intron
ATTATCTCTCAAGACAGCAG+CGG 0.713092 5_2:-12388446 None:intergenic
AGCATGGTTTACATACAGCG+GGG 0.717629 5_2:-12388535 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTACTTTTTTTTTTTTTTTA+AGG + chr5_2:12385569-12385588 Msa0757500:intron 10.0%
!! AAGAAAGAAATATATAAATA+GGG - chr5_2:12386602-12386621 None:intergenic 10.0%
!! AAAGAAAGAAATATATAAAT+AGG - chr5_2:12386603-12386622 None:intergenic 10.0%
!!! ATGTTGTTTTATTATTTTTT+CGG + chr5_2:12386929-12386948 Msa0757500:intron 10.0%
!!! ATTGATAATATATTTCAAAA+GGG - chr5_2:12388576-12388595 None:intergenic 10.0%
!! TAAAGGTAAATTATGAATTA+GGG - chr5_2:12385148-12385167 None:intergenic 15.0%
!! ATAAAGGTAAATTATGAATT+AGG - chr5_2:12385149-12385168 None:intergenic 15.0%
!! TTTGATATCATTATTCATTA+TGG + chr5_2:12385389-12385408 Msa0757500:intron 15.0%
!! TTGATATCATTATTCATTAT+GGG + chr5_2:12385390-12385409 Msa0757500:intron 15.0%
!!! GATTAAACTATTTAAAGTAA+AGG + chr5_2:12385908-12385927 Msa0757500:CDS 15.0%
!! AAGTAAACAATTTAATAAGA+AGG - chr5_2:12386022-12386041 None:intergenic 15.0%
!! ATATTTGTGTAATTTATTTC+TGG - chr5_2:12386236-12386255 None:intergenic 15.0%
!! AATAAATTACACAAATATCT+TGG + chr5_2:12386238-12386257 Msa0757500:intron 15.0%
!! AATCACTAATAAAATTACTA+AGG - chr5_2:12387402-12387421 None:intergenic 15.0%
!!! AAAATTGATTCTTGTTTTTA+AGG + chr5_2:12387817-12387836 Msa0757500:intron 15.0%
!!! TTTATATCATGTTATTTGTT+TGG + chr5_2:12387861-12387880 Msa0757500:intron 15.0%
!!! TTGATAATATATTTCAAAAG+GGG - chr5_2:12388575-12388594 None:intergenic 15.0%
!!! CATTGATAATATATTTCAAA+AGG - chr5_2:12388577-12388596 None:intergenic 15.0%
!!! AAATAAATTTTACAAACCAT+GGG - chr5_2:12388600-12388619 None:intergenic 15.0%
!!! ATATTTGTTGCTTTTGAAAA+AGG + chr5_2:12385475-12385494 Msa0757500:intron 20.0%
!!! CTAAACATACATTTTTTTGT+TGG + chr5_2:12385736-12385755 Msa0757500:intron 20.0%
!!! TTTTTGTTGTTCTTATTGAA+AGG + chr5_2:12385795-12385814 Msa0757500:intron 20.0%
!!! TAGAAGTTTTTACTTGATAT+AGG + chr5_2:12386313-12386332 Msa0757500:intron 20.0%
!! ATAATCTACATAATGTAGTT+AGG + chr5_2:12386351-12386370 Msa0757500:intron 20.0%
!! ATATATAAATAGGGATGAAA+AGG - chr5_2:12386593-12386612 None:intergenic 20.0%
!!! ATTTTATGCAATGTTATTAG+AGG - chr5_2:12386883-12386902 None:intergenic 20.0%
!! TTGCATAAAATGAGTAAAAT+TGG + chr5_2:12386892-12386911 Msa0757500:intron 20.0%
!! TTAAATATTGTGTATTCTCA+CGG + chr5_2:12387133-12387152 Msa0757500:intron 20.0%
!! AACAGAAGAAAATCAAATAT+AGG - chr5_2:12387200-12387219 None:intergenic 20.0%
!!! TATTAGTGATTTTTCATGAA+AGG + chr5_2:12387411-12387430 Msa0757500:intron 20.0%
!! ACTTGTATAACAAAATAAAG+TGG - chr5_2:12387626-12387645 None:intergenic 20.0%
!!! CAAGAATCAATTTTAAAGTT+AGG - chr5_2:12387811-12387830 None:intergenic 20.0%
!! GCTAAATTAAATGTATAATC+TGG + chr5_2:12387903-12387922 Msa0757500:intron 20.0%
!! TAAAACAGAATATGAAAACA+AGG - chr5_2:12388143-12388162 None:intergenic 20.0%
!!! GAAATAAATTTTACAAACCA+TGG - chr5_2:12388601-12388620 None:intergenic 20.0%
!! TATTCTAAACAATCAGAAAA+TGG + chr5_2:12388767-12388786 Msa0757500:three_prime_UTR 20.0%
!! ATTCTAAACAATCAGAAAAT+GGG + chr5_2:12388768-12388787 Msa0757500:three_prime_UTR 20.0%
! TTTCAATTAGAGAGAGATAA+AGG - chr5_2:12385165-12385184 None:intergenic 25.0%
! CTCAATAAAAAAAACTAGCT+AGG - chr5_2:12385448-12385467 None:intergenic 25.0%
!!! TTTTAAGGGTTTGTAAAGTT+TGG + chr5_2:12385584-12385603 Msa0757500:intron 25.0%
! ATTAATGAACTAGATAGGAA+TGG + chr5_2:12385759-12385778 Msa0757500:intron 25.0%
! TTAATGAACTAGATAGGAAT+GGG + chr5_2:12385760-12385779 Msa0757500:intron 25.0%
! TTCATTGTGTTAAATTTGTG+TGG + chr5_2:12386051-12386070 Msa0757500:intron 25.0%
! CAAACCAAAACATATATCTT+CGG - chr5_2:12386280-12386299 None:intergenic 25.0%
! AACTCTGGATATTTAATGAT+TGG + chr5_2:12386508-12386527 Msa0757500:intron 25.0%
! TAAGACTCGATGAAAAATAA+AGG - chr5_2:12386548-12386567 None:intergenic 25.0%
! TCTTGAATCAATTAACAATG+AGG - chr5_2:12386636-12386655 None:intergenic 25.0%
! AAATGAGTAAAATTGGACAA+AGG + chr5_2:12386899-12386918 Msa0757500:intron 25.0%
! TCATTCAACAATAAACTATC+TGG - chr5_2:12387105-12387124 None:intergenic 25.0%
!!! TATTTGATTTTCTTCTGTTC+TGG + chr5_2:12387201-12387220 Msa0757500:intron 25.0%
!! TGATTGTTCTTTTCTTTCTT+GGG + chr5_2:12387303-12387322 Msa0757500:intron 25.0%
! AAGCCTTCATTAAATATACT+GGG - chr5_2:12387343-12387362 None:intergenic 25.0%
! AAAGCCTTCATTAAATATAC+TGG - chr5_2:12387344-12387363 None:intergenic 25.0%
! TGTATAACAAAATAAAGTGG+CGG - chr5_2:12387623-12387642 None:intergenic 25.0%
! TTACAAGTAATATCCATCAT+CGG - chr5_2:12387765-12387784 None:intergenic 25.0%
! AGATGACAGTGTTTATATTA+AGG - chr5_2:12388276-12388295 None:intergenic 25.0%
! AATATAAACACTGTCATCTA+TGG + chr5_2:12388277-12388296 Msa0757500:CDS 25.0%
!!! CTCTGTTTTTTAACATATCA+GGG + chr5_2:12388325-12388344 Msa0757500:intron 25.0%
! ACATTAGATTCAAACATCTT+TGG - chr5_2:12388472-12388491 None:intergenic 25.0%
! AAATATATTATCAATGCCCA+TGG + chr5_2:12388581-12388600 Msa0757500:three_prime_UTR 25.0%
TTCAATCTTCTCAATCAATC+AGG + chr5_2:12385011-12385030 Msa0757500:five_prime_UTR 30.0%
GTAAATTATGAATTAGGGTG+AGG - chr5_2:12385143-12385162 None:intergenic 30.0%
ATGATATCAAAGAATCGACA+TGG - chr5_2:12385380-12385399 None:intergenic 30.0%
! TGATTTTGCAAAAGCTATGT+AGG + chr5_2:12385657-12385676 Msa0757500:intron 30.0%
! GATTTTGCAAAAGCTATGTA+GGG + chr5_2:12385658-12385677 Msa0757500:intron 30.0%
ATGTATGTTTAGTATCACTG+CGG - chr5_2:12385728-12385747 None:intergenic 30.0%
GTTGGATTAATGAACTAGAT+AGG + chr5_2:12385754-12385773 Msa0757500:intron 30.0%
!!! TTGTAGATGTTGTTTTTGCT+TGG + chr5_2:12385821-12385840 Msa0757500:intron 30.0%
! ACTACCGAAGATATATGTTT+TGG + chr5_2:12386273-12386292 Msa0757500:intron 30.0%
AAATAAAGGAGGAAGAGAAT+GGG - chr5_2:12386534-12386553 None:intergenic 30.0%
AAAATAAAGGAGGAAGAGAA+TGG - chr5_2:12386535-12386554 None:intergenic 30.0%
TAAAATCCACCATAAGAGTA+TGG - chr5_2:12386835-12386854 None:intergenic 30.0%
!!! ATACTCTTATGGTGGATTTT+AGG + chr5_2:12386834-12386853 Msa0757500:intron 30.0%
TTTCCGTGAAAATTTACTGT+AGG + chr5_2:12387053-12387072 Msa0757500:intron 30.0%
GGTTATCACTTAACAAGTAT+AGG - chr5_2:12387263-12387282 None:intergenic 30.0%
! TACTTGTTAAGTGATAACCT+TGG + chr5_2:12387264-12387283 Msa0757500:intron 30.0%
! ACTTGTTAAGTGATAACCTT+GGG + chr5_2:12387265-12387284 Msa0757500:intron 30.0%
GAAAGAAAAGAACAATCACA+TGG - chr5_2:12387301-12387320 None:intergenic 30.0%
! GTGATTGTTCTTTTCTTTCT+TGG + chr5_2:12387302-12387321 Msa0757500:intron 30.0%
TCTCCCAGTATATTTAATGA+AGG + chr5_2:12387337-12387356 Msa0757500:intron 30.0%
! AGGCTTTTTATCTTGAGAAT+TGG + chr5_2:12387357-12387376 Msa0757500:intron 30.0%
ATGAAAGGAAACTTCTTTAG+TGG + chr5_2:12387426-12387445 Msa0757500:intron 30.0%
TACATGTTTAAGCTGACTAA+TGG - chr5_2:12387473-12387492 None:intergenic 30.0%
TACAAGTAATATCCATCATC+GGG - chr5_2:12387764-12387783 None:intergenic 30.0%
!! GATGATGGATATTACTTGTA+AGG + chr5_2:12387764-12387783 Msa0757500:intron 30.0%
AAGTTAGGCTAAAGATAAAG+TGG - chr5_2:12387796-12387815 None:intergenic 30.0%
CATGATATAAAGACAGCATA+GGG - chr5_2:12387852-12387871 None:intergenic 30.0%
ACATGATATAAAGACAGCAT+AGG - chr5_2:12387853-12387872 None:intergenic 30.0%
!!! CTGTTTTTTCGTCATTTTGA+GGG - chr5_2:12387948-12387967 None:intergenic 30.0%
!!! TCTGTTTTTTCGTCATTTTG+AGG - chr5_2:12387949-12387968 None:intergenic 30.0%
TGTAACAAAAAACAGCATAG+AGG - chr5_2:12387987-12388006 None:intergenic 30.0%
!!! TATGCTGTTTTTTGTTACAG+AGG + chr5_2:12387988-12388007 Msa0757500:intron 30.0%
TTAACTACAATTCATGCTTC+TGG + chr5_2:12388110-12388129 Msa0757500:intron 30.0%
TAACTACAATTCATGCTTCT+GGG + chr5_2:12388111-12388130 Msa0757500:intron 30.0%
GTATCATTATGTGTATATGC+AGG + chr5_2:12388180-12388199 Msa0757500:intron 30.0%
TTTCCTTCCAAGTCAATATT+TGG - chr5_2:12388214-12388233 None:intergenic 30.0%
ACAGTGTTTATATTAAGGAC+AGG - chr5_2:12388271-12388290 None:intergenic 30.0%
!!! GCTCTGTTTTTTAACATATC+AGG + chr5_2:12388324-12388343 Msa0757500:intron 30.0%
!! TCAGGGTTTTGATATTTGAA+CGG + chr5_2:12388342-12388361 Msa0757500:intron 30.0%
AGATGTTTGAATCTAATGTG+AGG + chr5_2:12388473-12388492 Msa0757500:CDS 30.0%
AATATATTTCAAAAGGGGCA+TGG - chr5_2:12388570-12388589 None:intergenic 30.0%
!!! CGTCAGTATGTTATTTTTCT+TGG + chr5_2:12388642-12388661 Msa0757500:three_prime_UTR 30.0%
!!! CAGTATGTTATTTTTCTTGG+TGG + chr5_2:12388645-12388664 Msa0757500:three_prime_UTR 30.0%
!!! TATGTTATTTTTCTTGGTGG+AGG + chr5_2:12388648-12388667 Msa0757500:three_prime_UTR 30.0%
ACATCAACATTCCAATTGTT+TGG - chr5_2:12388716-12388735 None:intergenic 30.0%
GATGTAACTTATGTGCTTTA+TGG + chr5_2:12388731-12388750 Msa0757500:three_prime_UTR 30.0%
AAAAACAGAAACCCTAGAAG+AGG - chr5_2:12385109-12385128 None:intergenic 35.0%
ACAAGAATAAGATCGCGTTT+AGG - chr5_2:12385334-12385353 None:intergenic 35.0%
CATTATGGGACAAAATTAGC+TGG + chr5_2:12385404-12385423 Msa0757500:intron 35.0%
TGTATGTTTAGTATCACTGC+GGG - chr5_2:12385727-12385746 None:intergenic 35.0%
! GATATGAAGTGTTCTAATGC+TGG + chr5_2:12385861-12385880 Msa0757500:intron 35.0%
!!! CTGGTTGATGTTGTTTTTGT+AGG + chr5_2:12385880-12385899 Msa0757500:intron 35.0%
!!! TTGCCATAGCAGGAATTTTT+TGG + chr5_2:12386152-12386171 Msa0757500:intron 35.0%
!!! TGCCATAGCAGGAATTTTTT+GGG + chr5_2:12386153-12386172 Msa0757500:intron 35.0%
GACTCGATGAAAAATAAAGG+AGG - chr5_2:12386545-12386564 None:intergenic 35.0%
! GCTGCTAACAATGATACTTT+TGG + chr5_2:12386656-12386675 Msa0757500:intron 35.0%
! ATGTTATTAGAGGATGATGG+TGG - chr5_2:12386873-12386892 None:intergenic 35.0%
GCAATGTTATTAGAGGATGA+TGG - chr5_2:12386876-12386895 None:intergenic 35.0%
ACAAGGTAGAGATAAGTGAA+TGG + chr5_2:12386969-12386988 Msa0757500:intron 35.0%
AATGGAAAACCTTGAGATTG+TGG + chr5_2:12386987-12387006 Msa0757500:intron 35.0%
TTCTTACTACCACAATCTCA+AGG - chr5_2:12386999-12387018 None:intergenic 35.0%
TGTGGTAGTAAGAATGATCT+AGG + chr5_2:12387005-12387024 Msa0757500:intron 35.0%
ATCTAGGAGTTGAATTAGCA+AGG + chr5_2:12387021-12387040 Msa0757500:intron 35.0%
! GAGCCTACAGTAAATTTTCA+CGG - chr5_2:12387059-12387078 None:intergenic 35.0%
!! ATAAGAGCATTCACACTTCA+CGG - chr5_2:12387230-12387249 None:intergenic 35.0%
CTTGTTAAGTGATAACCTTG+GGG + chr5_2:12387266-12387285 Msa0757500:intron 35.0%
TTGTTAAGTGATAACCTTGG+GGG + chr5_2:12387267-12387286 Msa0757500:intron 35.0%
! TTGTTCTTTTCTTTCTTGGG+CGG + chr5_2:12387306-12387325 Msa0757500:intron 35.0%
TCAAAACTTCGAAGTTCATC+AGG - chr5_2:12387736-12387755 None:intergenic 35.0%
AACAAAAAACAGCATAGAGG+TGG - chr5_2:12387984-12388003 None:intergenic 35.0%
! CTACCATCCAAATATTGACT+TGG + chr5_2:12388204-12388223 Msa0757500:CDS 35.0%
CTTCCAAGTCAATATTTGGA+TGG - chr5_2:12388210-12388229 None:intergenic 35.0%
!! CATCCAAATATTGACTTGGA+AGG + chr5_2:12388208-12388227 Msa0757500:CDS 35.0%
TCAACATCTTAAGAGAAGAC+TGG + chr5_2:12388242-12388261 Msa0757500:CDS 35.0%
!! CAGGGTTTTGATATTTGAAC+GGG + chr5_2:12388343-12388362 Msa0757500:intron 35.0%
!! AGGGTTTTGATATTTGAACG+GGG + chr5_2:12388344-12388363 Msa0757500:intron 35.0%
ACGGGGATACTTGAAATTTA+TGG + chr5_2:12388361-12388380 Msa0757500:intron 35.0%
! ATCTGTTACTTATTGTGTGC+AGG + chr5_2:12388390-12388409 Msa0757500:intron 35.0%
TGTTTGAATCTAATGTGAGG+AGG + chr5_2:12388476-12388495 Msa0757500:CDS 35.0%
GTTTGAATCTAATGTGAGGA+GGG + chr5_2:12388477-12388496 Msa0757500:CDS 35.0%
GCATCTAAAAGCCAAACAAT+TGG + chr5_2:12388702-12388721 Msa0757500:three_prime_UTR 35.0%
GAGATCGATAATTGAGAGAG+AGG - chr5_2:12385076-12385095 None:intergenic 40.0%
AGAAACCCTAGAAGAGGAAA+GGG - chr5_2:12385103-12385122 None:intergenic 40.0%
AACGCGTACGGAAAAAACAA+AGG - chr5_2:12385247-12385266 None:intergenic 40.0%
GAAGTTCTACGATTAGATCG+CGG + chr5_2:12385267-12385286 Msa0757500:intron 40.0%
GCAAAAGCTACAAAGCTGTT+TGG + chr5_2:12385510-12385529 Msa0757500:intron 40.0%
AAAGCTGTTTGGTATCACGT+TGG + chr5_2:12385521-12385540 Msa0757500:intron 40.0%
! CTGAGTTTGAGTTCGATTTC+TGG - chr5_2:12385626-12385645 None:intergenic 40.0%
CAGAAATCGAACTCAAACTC+AGG + chr5_2:12385624-12385643 Msa0757500:intron 40.0%
! TAGATAGGAATGGGCTTGAT+TGG + chr5_2:12385769-12385788 Msa0757500:intron 40.0%
CAAGCTGAAAATGCCAGTAA+TGG + chr5_2:12385945-12385964 Msa0757500:CDS 40.0%
CTTAACAGGTACTCCATTAC+TGG - chr5_2:12385961-12385980 None:intergenic 40.0%
GATTCAAGTATTCTGGCCAT+GGG - chr5_2:12386089-12386108 None:intergenic 40.0%
CCAGAATACTTGAATCGAGA+GGG + chr5_2:12386093-12386112 Msa0757500:intron 40.0%
ATACTTGAATCGAGAGGGAA+AGG + chr5_2:12386098-12386117 Msa0757500:intron 40.0%
GAGGGAAAGGTGAACAATAA+AGG + chr5_2:12386111-12386130 Msa0757500:intron 40.0%
TAATGTGTAGTTGCCATAGC+AGG + chr5_2:12386142-12386161 Msa0757500:intron 40.0%
!!! GCCATAGCAGGAATTTTTTG+GGG + chr5_2:12386154-12386173 Msa0757500:intron 40.0%
!!! CCATAGCAGGAATTTTTTGG+GGG + chr5_2:12386155-12386174 Msa0757500:intron 40.0%
TTTCTGGATTTCATTCTCGC+TGG - chr5_2:12386220-12386239 None:intergenic 40.0%
CAATTGCAGGAGATGATTGT+GGG - chr5_2:12386453-12386472 None:intergenic 40.0%
ACAATTGCAGGAGATGATTG+TGG - chr5_2:12386454-12386473 None:intergenic 40.0%
ACAATCATCTCCTGCAATTG+TGG + chr5_2:12386453-12386472 Msa0757500:intron 40.0%
ATCCAGAGTTTACTGAAGAC+TGG - chr5_2:12386498-12386517 None:intergenic 40.0%
!! AGAAGCATGGAGGTTTTCAT+AGG - chr5_2:12386789-12386808 None:intergenic 40.0%
! AGCTTATAGTAGAAGCATGG+AGG - chr5_2:12386799-12386818 None:intergenic 40.0%
TGCAGCTTATAGTAGAAGCA+TGG - chr5_2:12386802-12386821 None:intergenic 40.0%
TGTCATCTGCCATACTCTTA+TGG + chr5_2:12386823-12386842 Msa0757500:intron 40.0%
ATGAGACGCAGAAAGAAACA+AGG + chr5_2:12386952-12386971 Msa0757500:intron 40.0%
AGTGTGAATGCTCTTATGCT+TGG + chr5_2:12387233-12387252 Msa0757500:intron 40.0%
TGAAGAGTTACAAGCTCACT+AGG + chr5_2:12387506-12387525 Msa0757500:intron 40.0%
AATTGCATGGTGCAAGACTT+TGG - chr5_2:12387695-12387714 None:intergenic 40.0%
TTTGCCATTGGGAAATTGCA+TGG - chr5_2:12387708-12387727 None:intergenic 40.0%
ATCAGGTCATCTTTGCCATT+GGG - chr5_2:12387719-12387738 None:intergenic 40.0%
!!! GCTGTTTTTTGTTACAGAGG+AGG + chr5_2:12387991-12388010 Msa0757500:intron 40.0%
ATAGATGGGAGACACATTGA+AGG - chr5_2:12388031-12388050 None:intergenic 40.0%
TTTGTCTTGCACTTCACCTT+GGG - chr5_2:12388066-12388085 None:intergenic 40.0%
! TGGCTTGTATCATCTCTTCA+CGG + chr5_2:12388297-12388316 Msa0757500:CDS 40.0%
TGTATCATCTCTTCACGGTA+TGG + chr5_2:12388302-12388321 Msa0757500:intron 40.0%
ATTATCTCTCAAGACAGCAG+CGG - chr5_2:12388449-12388468 None:intergenic 40.0%
TGAGCATGGTTTACATACAG+CGG - chr5_2:12388540-12388559 None:intergenic 40.0%
!!! GTTTGGCTTTTAGATGCGTT+TGG - chr5_2:12388699-12388718 None:intergenic 40.0%
! CAATCAGAAAATGGGTTCAG+CGG + chr5_2:12388776-12388795 Msa0757500:three_prime_UTR 40.0%
GAATAGCGTGAGAGAAACGA+AGG - chr5_2:12385043-12385062 None:intergenic 45.0%
TCTTTCCCCTTTCCTCTTCT+AGG + chr5_2:12385094-12385113 Msa0757500:intron 45.0%
CTTTCCCCTTTCCTCTTCTA+GGG + chr5_2:12385095-12385114 Msa0757500:intron 45.0%
GAAACCCTAGAAGAGGAAAG+GGG - chr5_2:12385102-12385121 None:intergenic 45.0%
CAGAAACCCTAGAAGAGGAA+AGG - chr5_2:12385104-12385123 None:intergenic 45.0%
TCGTAGAACTTCAACGCGTA+CGG - chr5_2:12385259-12385278 None:intergenic 45.0%
!! CGCGGTGCTTTTTGTTGAAT+CGG + chr5_2:12385285-12385304 Msa0757500:intron 45.0%
!!! GGGTTGCTTTTGCAAAATCG+CGG + chr5_2:12385678-12385697 Msa0757500:intron 45.0%
GCGGTGACTTACGATGATTT+GGG + chr5_2:12385697-12385716 Msa0757500:intron 45.0%
CCAGCACTTTGCTTCTTAAC+AGG - chr5_2:12385975-12385994 None:intergenic 45.0%
CCTGTTAAGAAGCAAAGTGC+TGG + chr5_2:12385972-12385991 Msa0757500:CDS 45.0%
AAGTATTCTGGCCATGGGTA+GGG - chr5_2:12386084-12386103 None:intergenic 45.0%
CGATTCAAGTATTCTGGCCA+TGG - chr5_2:12386090-12386109 None:intergenic 45.0%
GCCAGAATACTTGAATCGAG+AGG + chr5_2:12386092-12386111 Msa0757500:intron 45.0%
CCCTCTCGATTCAAGTATTC+TGG - chr5_2:12386096-12386115 None:intergenic 45.0%
CCCCCAAAAAATTCCTGCTA+TGG - chr5_2:12386158-12386177 None:intergenic 45.0%
!! TTTTTGGGGGCTTCGTTGTT+TGG + chr5_2:12386168-12386187 Msa0757500:intron 45.0%
!! TTTTGGGGGCTTCGTTGTTT+GGG + chr5_2:12386169-12386188 Msa0757500:intron 45.0%
AGAGAAGAGACCACAATTGC+AGG - chr5_2:12386466-12386485 None:intergenic 45.0%
GACCAGTCTTCAGTAAACTC+TGG + chr5_2:12386493-12386512 Msa0757500:intron 45.0%
CATCTGCCATACTCTTATGG+TGG + chr5_2:12386826-12386845 Msa0757500:intron 45.0%
!! TAGAGGATGATGGTGGTACA+TGG - chr5_2:12386866-12386885 None:intergenic 45.0%
GTGAGCTTGTAACTCTTCAC+AGG - chr5_2:12387505-12387524 None:intergenic 45.0%
TGCACCATGCAATTTCCCAA+TGG + chr5_2:12387701-12387720 Msa0757500:CDS 45.0%
CATCAGGTCATCTTTGCCAT+TGG - chr5_2:12387720-12387739 None:intergenic 45.0%
!!! GTTTTGATTCGACCCGATGA+TGG + chr5_2:12387749-12387768 Msa0757500:CDS 45.0%
AAGACAGCATAGGGACATCA+AGG - chr5_2:12387843-12387862 None:intergenic 45.0%
!! TCATTTTGAGGGTGACGTGT+AGG - chr5_2:12387937-12387956 None:intergenic 45.0%
GGTGCTTCATGTGGATAGAT+GGG - chr5_2:12388045-12388064 None:intergenic 45.0%
CTTTGTCTTGCACTTCACCT+TGG - chr5_2:12388067-12388086 None:intergenic 45.0%
CAAGGTGAAGTGCAAGACAA+AGG + chr5_2:12388065-12388084 Msa0757500:CDS 45.0%
GTGAAGTGCAAGACAAAGGT+AGG + chr5_2:12388069-12388088 Msa0757500:intron 45.0%
TTCAGGGGATCCTCGTAATT+TGG - chr5_2:12388418-12388437 None:intergenic 45.0%
AGCATGGTTTACATACAGCG+GGG - chr5_2:12388538-12388557 None:intergenic 45.0%
GAGCATGGTTTACATACAGC+GGG - chr5_2:12388539-12388558 None:intergenic 45.0%
! TAGATGCGTTTGGTGGTCTA+AGG - chr5_2:12388689-12388708 None:intergenic 45.0%
! TGGCTTTTAGATGCGTTTGG+TGG - chr5_2:12388696-12388715 None:intergenic 45.0%
!!! TACTTTTTTTTTTTTTTTAA+GGG + chr5_2:12385570-12385589 Msa0757500:intron 5.0%
CGCGGTGACTTACGATGATT+TGG + chr5_2:12385696-12385715 Msa0757500:intron 50.0%
AGTATTCTGGCCATGGGTAG+GGG - chr5_2:12386083-12386102 None:intergenic 50.0%
CAAGTATTCTGGCCATGGGT+AGG - chr5_2:12386085-12386104 None:intergenic 50.0%
! ACATGGTTTTCTCACCCCCA+AGG - chr5_2:12387284-12387303 None:intergenic 50.0%
GGGTGCTTCATGTGGATAGA+TGG - chr5_2:12388046-12388065 None:intergenic 50.0%
! CTATCCACATGAAGCACCCA+AGG + chr5_2:12388047-12388066 Msa0757500:CDS 50.0%
TTCACCTTGGGTGCTTCATG+TGG - chr5_2:12388054-12388073 None:intergenic 50.0%
TGTGCAGGAGCCAAATTACG+AGG + chr5_2:12388405-12388424 Msa0757500:intron 50.0%
AGCAGCGGCATCATGATTCA+GGG - chr5_2:12388434-12388453 None:intergenic 50.0%
AATGTGAGGAGGGCAATGTC+TGG + chr5_2:12388487-12388506 Msa0757500:CDS 50.0%
! GCAATGTCTGGTGGGTATGT+GGG + chr5_2:12388499-12388518 Msa0757500:CDS 50.0%
TTACATACAGCGGGGGAAGA+AGG - chr5_2:12388530-12388549 None:intergenic 50.0%
GCATGGTTTACATACAGCGG+GGG - chr5_2:12388537-12388556 None:intergenic 50.0%
GGCATGGAAGTTGTTGAGCA+TGG - chr5_2:12388554-12388573 None:intergenic 50.0%
!! TTTCTTGGTGGAGGAGCATC+AGG + chr5_2:12388657-12388676 Msa0757500:three_prime_UTR 50.0%
GGCGAGTTGCGTCTTCACAA+AGG + chr5_2:12385993-12386012 Msa0757500:CDS 55.0%
TTTGGGCCTTGGAGTGTGAC+TGG + chr5_2:12386186-12386205 Msa0757500:intron 55.0%
TCCTCTCCAGTCACACTCCA+AGG - chr5_2:12386195-12386214 None:intergenic 55.0%
CTGTAGGCTCTCCTGCTTTG+AGG + chr5_2:12387069-12387088 Msa0757500:intron 55.0%
!! TAGGCTCTCCTGCTTTGAGG+AGG + chr5_2:12387072-12387091 Msa0757500:intron 55.0%
!! TCTCCTGCTTTGAGGAGGAC+AGG + chr5_2:12387077-12387096 Msa0757500:intron 55.0%
!! CTCCTGCTTTGAGGAGGACA+GGG + chr5_2:12387078-12387097 Msa0757500:intron 55.0%
GCAGCGGCATCATGATTCAG+GGG - chr5_2:12388433-12388452 None:intergenic 55.0%
CAGCAGCGGCATCATGATTC+AGG - chr5_2:12388435-12388454 None:intergenic 55.0%
TGAGGAGGGCAATGTCTGGT+GGG + chr5_2:12388491-12388510 Msa0757500:CDS 55.0%
! GGCAATGTCTGGTGGGTATG+TGG + chr5_2:12388498-12388517 Msa0757500:CDS 55.0%
GGGCTTCGTTGTTTGGGCCT+TGG + chr5_2:12386175-12386194 Msa0757500:intron 60.0%
GCCTTGGAGTGTGACTGGAG+AGG + chr5_2:12386191-12386210 Msa0757500:intron 60.0%
GTCCCTGTCCTCCTCAAAGC+AGG - chr5_2:12387083-12387102 None:intergenic 60.0%
GTGAGGAGGGCAATGTCTGG+TGG + chr5_2:12388490-12388509 Msa0757500:CDS 60.0%
GTGGCACTTGCCCCTACCCA+TGG + chr5_2:12386070-12386089 Msa0757500:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 12384912 12388804 12384912 ID=Msa0757500;Name=Msa0757500
chr5_2 mRNA 12384912 12388804 12384912 ID=Msa0757500-mRNA-1;Parent=Msa0757500;Name=Msa0757500-mRNA-1;_AED=0.29;_eAED=0.29;_QI=125|1|1|1|0.8|0.83|6|255|183
chr5_2 exon 12384912 12385032 12384912 ID=Msa0757500-mRNA-1:exon:5551;Parent=Msa0757500-mRNA-1
chr5_2 exon 12385902 12386014 12385902 ID=Msa0757500-mRNA-1:exon:5552;Parent=Msa0757500-mRNA-1
chr5_2 exon 12387672 12387780 12387672 ID=Msa0757500-mRNA-1:exon:5553;Parent=Msa0757500-mRNA-1
chr5_2 exon 12388008 12388086 12388008 ID=Msa0757500-mRNA-1:exon:5554;Parent=Msa0757500-mRNA-1
chr5_2 exon 12388202 12388318 12388202 ID=Msa0757500-mRNA-1:exon:5555;Parent=Msa0757500-mRNA-1
chr5_2 exon 12388412 12388804 12388412 ID=Msa0757500-mRNA-1:exon:5556;Parent=Msa0757500-mRNA-1
chr5_2 five_prime_UTR 12384912 12385032 12384912 ID=Msa0757500-mRNA-1:five_prime_utr;Parent=Msa0757500-mRNA-1
chr5_2 five_prime_UTR 12385902 12385905 12385902 ID=Msa0757500-mRNA-1:five_prime_utr;Parent=Msa0757500-mRNA-1
chr5_2 CDS 12385906 12386014 12385906 ID=Msa0757500-mRNA-1:cds;Parent=Msa0757500-mRNA-1
chr5_2 CDS 12387672 12387780 12387672 ID=Msa0757500-mRNA-1:cds;Parent=Msa0757500-mRNA-1
chr5_2 CDS 12388008 12388086 12388008 ID=Msa0757500-mRNA-1:cds;Parent=Msa0757500-mRNA-1
chr5_2 CDS 12388202 12388318 12388202 ID=Msa0757500-mRNA-1:cds;Parent=Msa0757500-mRNA-1
chr5_2 CDS 12388412 12388549 12388412 ID=Msa0757500-mRNA-1:cds;Parent=Msa0757500-mRNA-1
chr5_2 three_prime_UTR 12388550 12388804 12388550 ID=Msa0757500-mRNA-1:three_prime_utr;Parent=Msa0757500-mRNA-1
Gene Sequence

>Msa0757500

ATGATTAAACTATTTAAAGTAAAGGAAAAGCAAAGAGAACAAGCTGAAAATGCCAGTAATGGAGTACCTGTTAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGATATAAGTGAGCTGAATCTACCAAAGTCTTGCACCATGCAATTTCCCAATGGCAAAGATGACCTGATGAACTTCGAAGTTTTGATTCGACCCGATGATGGATATTACTTAGGAGGTGCATTTTTGTTTTCCTTCAATGTGTCTCCCATCTATCCACATGAAGCACCCAAGGTGAAGTGCAAGACAAAGGTCTACCATCCAAATATTGACTTGGAAGGAAATGTGTGTCTCAACATCTTAAGAGAAGACTGGAAACCTGTCCTTAATATAAACACTGTCATCTATGGCTTGTATCATCTCTTCACGGAGCCAAATTACGAGGATCCCCTGAATCATGATGCCGCTGCTGTCTTGAGAGATAATCCAAAGATGTTTGAATCTAATGTGAGGAGGGCAATGTCTGGTGGGTATGTGGGACAAACCTTCTTCCCCCGCTGTATGTAA
Protein sequence

>Msa0757500

MIKLFKVKEKQREQAENASNGVPVKKQSAGELRLHKDISELNLPKSCTMQFPNGKDDLMNFEVLIRPDDGYYLGGAFLFSFNVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRDNPKMFESNVRRAMSGGYVGQTFFPRCM*