Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216340 | XP_013464730.1 | 96.632 | 386 | 13 | 0 | 1 | 386 | 1 | 386 | 0.0 | 762 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216340 | sp|Q84WQ5|CBSX5_ARATH | 51.256 | 398 | 171 | 11 | 1 | 386 | 1 | 387 | 1.99e-111 | 334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216340 | A0A072VKT6 | 96.632 | 386 | 13 | 0 | 1 | 386 | 1 | 386 | 0.0 | 762 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0216340 | -0.819376 | 1.199812e-52 | -8.615850e-47 |
| Msa0007810 | Msa0216340 | -0.810866 | 9.312788e-51 | -8.615850e-47 |
| Msa0017300 | Msa0216340 | -0.813587 | 2.374073e-51 | -8.615850e-47 |
| Msa0024030 | Msa0216340 | 0.810040 | 1.404735e-50 | -8.615850e-47 |
| Msa0024500 | Msa0216340 | -0.848211 | 7.082234e-60 | -8.615850e-47 |
| Msa0037180 | Msa0216340 | 0.891245 | 4.735303e-74 | -8.615850e-47 |
| Msa0038150 | Msa0216340 | -0.801401 | 9.160621e-49 | -8.615850e-47 |
| Msa0040860 | Msa0216340 | -0.831320 | 1.784258e-55 | -8.615850e-47 |
| Msa0045810 | Msa0216340 | 0.818010 | 2.450239e-52 | -8.615850e-47 |
| Msa0056230 | Msa0216340 | -0.808305 | 3.305900e-50 | -8.615850e-47 |
| Msa0062190 | Msa0216340 | 0.812192 | 4.798813e-51 | -8.615850e-47 |
| Msa0065670 | Msa0216340 | -0.814310 | 1.644251e-51 | -8.615850e-47 |
| Msa0074860 | Msa0216340 | -0.820879 | 5.433235e-53 | -8.615850e-47 |
| Msa0075990 | Msa0216340 | -0.833312 | 5.733112e-56 | -8.615850e-47 |
| Msa0081610 | Msa0216340 | -0.807043 | 6.127656e-50 | -8.615850e-47 |
| Msa0092220 | Msa0216340 | 0.883589 | 3.947903e-71 | -8.615850e-47 |
| Msa0095810 | Msa0216340 | -0.812655 | 3.800630e-51 | -8.615850e-47 |
| Msa0106540 | Msa0216340 | 0.806117 | 9.611720e-50 | -8.615850e-47 |
| Msa0127220 | Msa0216340 | -0.819794 | 9.632998e-53 | -8.615850e-47 |
| Msa0127350 | Msa0216340 | -0.801659 | 8.113634e-49 | -8.615850e-47 |
| Msa0127910 | Msa0216340 | -0.818056 | 2.391587e-52 | -8.615850e-47 |
| Msa0132080 | Msa0216340 | -0.808014 | 3.813408e-50 | -8.615850e-47 |
| Msa0139500 | Msa0216340 | 0.805141 | 1.540693e-49 | -8.615850e-47 |
| Msa0141410 | Msa0216340 | 0.804452 | 2.146021e-49 | -8.615850e-47 |
| Msa0143590 | Msa0216340 | 0.826483 | 2.647121e-54 | -8.615850e-47 |
| Msa0159240 | Msa0216340 | -0.805058 | 1.603242e-49 | -8.615850e-47 |
| Msa0168770 | Msa0216340 | -0.814526 | 1.473360e-51 | -8.615850e-47 |
| Msa0173950 | Msa0216340 | -0.802559 | 5.298100e-49 | -8.615850e-47 |
| Msa0174060 | Msa0216340 | -0.821060 | 4.934881e-53 | -8.615850e-47 |
| Msa0177320 | Msa0216340 | 0.895125 | 1.289470e-75 | -8.615850e-47 |
| Msa0178000 | Msa0216340 | 0.817855 | 2.655054e-52 | -8.615850e-47 |
| Msa0206040 | Msa0216340 | -0.807566 | 4.747055e-50 | -8.615850e-47 |
| Msa0212950 | Msa0216340 | -0.803776 | 2.965993e-49 | -8.615850e-47 |
| Msa0216150 | Msa0216340 | -0.855427 | 6.354321e-62 | -8.615850e-47 |
| Msa0216340 | Msa0224110 | 0.820790 | 5.693142e-53 | -8.615850e-47 |
| Msa0216340 | Msa0225070 | -0.838208 | 3.296857e-57 | -8.615850e-47 |
| Msa0216340 | Msa0226450 | -0.855742 | 5.142229e-62 | -8.615850e-47 |
| Msa0216340 | Msa0229350 | -0.827435 | 1.566731e-54 | -8.615850e-47 |
| Msa0216340 | Msa0241750 | 0.817819 | 2.705294e-52 | -8.615850e-47 |
| Msa0216340 | Msa0253230 | -0.809843 | 1.548632e-50 | -8.615850e-47 |
| Msa0216340 | Msa0256540 | 0.921497 | 3.318272e-88 | -8.615850e-47 |
| Msa0216340 | Msa0261350 | -0.822002 | 2.990690e-53 | -8.615850e-47 |
| Msa0216340 | Msa0262440 | 0.828535 | 8.518912e-55 | -8.615850e-47 |
| Msa0216340 | Msa0266140 | -0.809964 | 1.458497e-50 | -8.615850e-47 |
| Msa0216340 | Msa0266220 | 0.818361 | 2.040370e-52 | -8.615850e-47 |
| Msa0216340 | Msa0267450 | -0.817406 | 3.353001e-52 | -8.615850e-47 |
| Msa0216340 | Msa0267510 | -0.822839 | 1.911405e-53 | -8.615850e-47 |
| Msa0216340 | Msa0269220 | -0.821787 | 3.352612e-53 | -8.615850e-47 |
| Msa0216340 | Msa0287680 | 0.807629 | 4.604806e-50 | -8.615850e-47 |
| Msa0216340 | Msa0295680 | 0.825430 | 4.707439e-54 | -8.615850e-47 |
| Msa0216340 | Msa0299130 | -0.817395 | 3.372780e-52 | -8.615850e-47 |
| Msa0216340 | Msa0300280 | 0.803025 | 4.245044e-49 | -8.615850e-47 |
| Msa0216340 | Msa0326170 | -0.830263 | 3.240918e-55 | -8.615850e-47 |
| Msa0216340 | Msa0326710 | 0.833353 | 5.598737e-56 | -8.615850e-47 |
| Msa0216340 | Msa0331070 | -0.810985 | 8.778581e-51 | -8.615850e-47 |
| Msa0216340 | Msa0334320 | 0.921172 | 5.031712e-88 | -8.615850e-47 |
| Msa0216340 | Msa0334450 | -0.858192 | 9.755121e-63 | -8.615850e-47 |
| Msa0216340 | Msa0340700 | -0.818959 | 1.493085e-52 | -8.615850e-47 |
| Msa0216340 | Msa0341060 | -0.839414 | 1.607790e-57 | -8.615850e-47 |
| Msa0216340 | Msa0364030 | -0.834978 | 2.192096e-56 | -8.615850e-47 |
| Msa0216340 | Msa0364910 | -0.807206 | 5.659408e-50 | -8.615850e-47 |
| Msa0216340 | Msa0374390 | 0.810187 | 1.305526e-50 | -8.615850e-47 |
| Msa0216340 | Msa0382020 | -0.814106 | 1.824502e-51 | -8.615850e-47 |
| Msa0216340 | Msa0386880 | 0.841519 | 4.523886e-58 | -8.615850e-47 |
| Msa0216340 | Msa0387630 | -0.803956 | 2.720964e-49 | -8.615850e-47 |
| Msa0216340 | Msa0389080 | -0.802208 | 6.257923e-49 | -8.615850e-47 |
| Msa0216340 | Msa0390590 | -0.816269 | 6.033322e-52 | -8.615850e-47 |
| Msa0216340 | Msa0399820 | 0.809572 | 1.770658e-50 | -8.615850e-47 |
| Msa0216340 | Msa0403740 | -0.834323 | 3.203203e-56 | -8.615850e-47 |
| Msa0216340 | Msa0412580 | -0.824495 | 7.824111e-54 | -8.615850e-47 |
| Msa0216340 | Msa0428210 | 0.827055 | 1.932509e-54 | -8.615850e-47 |
| Msa0216340 | Msa0428300 | -0.808038 | 3.768910e-50 | -8.615850e-47 |
| Msa0216340 | Msa0450890 | -0.806462 | 8.129361e-50 | -8.615850e-47 |
| Msa0216340 | Msa0456450 | -0.838776 | 2.351416e-57 | -8.615850e-47 |
| Msa0216340 | Msa0457070 | -0.836477 | 9.146960e-57 | -8.615850e-47 |
| Msa0216340 | Msa0474570 | 0.831387 | 1.717999e-55 | -8.615850e-47 |
| Msa0216340 | Msa0481310 | 0.836892 | 7.168563e-57 | -8.615850e-47 |
| Msa0216340 | Msa0515570 | 0.809350 | 1.976175e-50 | -8.615850e-47 |
| Msa0216340 | Msa0519070 | -0.809597 | 1.749001e-50 | -8.615850e-47 |
| Msa0216340 | Msa0519150 | 0.807134 | 5.862508e-50 | -8.615850e-47 |
| Msa0216340 | Msa0524260 | 0.803937 | 2.746336e-49 | -8.615850e-47 |
| Msa0216340 | Msa0526520 | -0.814814 | 1.271707e-51 | -8.615850e-47 |
| Msa0216340 | Msa0528930 | 0.835188 | 1.940535e-56 | -8.615850e-47 |
| Msa0216340 | Msa0559450 | -0.801807 | 7.562949e-49 | -8.615850e-47 |
| Msa0216340 | Msa0559690 | -0.840539 | 8.183804e-58 | -8.615850e-47 |
| Msa0216340 | Msa0563440 | 0.820170 | 7.900824e-53 | -8.615850e-47 |
| Msa0216340 | Msa0567330 | 0.803781 | 2.958852e-49 | -8.615850e-47 |
| Msa0216340 | Msa0572730 | -0.828526 | 8.561313e-55 | -8.615850e-47 |
| Msa0216340 | Msa0574900 | 0.805792 | 1.125148e-49 | -8.615850e-47 |
| Msa0216340 | Msa0579070 | -0.834743 | 2.512770e-56 | -8.615850e-47 |
| Msa0216340 | Msa0580410 | -0.808039 | 3.766497e-50 | -8.615850e-47 |
| Msa0216340 | Msa0580890 | -0.802208 | 6.256018e-49 | -8.615850e-47 |
| Msa0216340 | Msa0581350 | 0.807369 | 5.228170e-50 | -8.615850e-47 |
| Msa0216340 | Msa0582270 | -0.827939 | 1.185961e-54 | -8.615850e-47 |
| Msa0216340 | Msa0583270 | -0.803890 | 2.809306e-49 | -8.615850e-47 |
| Msa0216340 | Msa0585330 | 0.817160 | 3.807998e-52 | -8.615850e-47 |
| Msa0216340 | Msa0585840 | 0.832597 | 8.632413e-56 | -8.615850e-47 |
| Msa0216340 | Msa0597700 | 0.815881 | 7.366594e-52 | -8.615850e-47 |
| Msa0216340 | Msa0600350 | 0.844927 | 5.583641e-59 | -8.615850e-47 |
| Msa0216340 | Msa0610230 | 0.802797 | 4.731601e-49 | -8.615850e-47 |
| Msa0216340 | Msa0610700 | -0.853242 | 2.720594e-61 | -8.615850e-47 |
| Msa0216340 | Msa0615070 | 0.810036 | 1.407341e-50 | -8.615850e-47 |
| Msa0216340 | Msa0621670 | -0.837852 | 4.069476e-57 | -8.615850e-47 |
| Msa0216340 | Msa0625780 | 0.827636 | 1.402489e-54 | -8.615850e-47 |
| Msa0216340 | Msa0630770 | -0.806312 | 8.743357e-50 | -8.615850e-47 |
| Msa0216340 | Msa0639220 | -0.828821 | 7.263965e-55 | -8.615850e-47 |
| Msa0216340 | Msa0639530 | -0.815452 | 9.178000e-52 | -8.615850e-47 |
| Msa0216340 | Msa0657010 | 0.812513 | 4.083229e-51 | -8.615850e-47 |
| Msa0216340 | Msa0658510 | 0.807429 | 5.077197e-50 | -8.615850e-47 |
| Msa0216340 | Msa0660150 | 0.810018 | 1.419645e-50 | -8.615850e-47 |
| Msa0216340 | Msa0663480 | 0.825835 | 3.774597e-54 | -8.615850e-47 |
| Msa0216340 | Msa0672950 | 0.825928 | 3.587446e-54 | -8.615850e-47 |
| Msa0216340 | Msa0672980 | 0.840799 | 6.992496e-58 | -8.615850e-47 |
| Msa0216340 | Msa0683840 | 0.813213 | 2.867390e-51 | -8.615850e-47 |
| Msa0216340 | Msa0693340 | -0.817187 | 3.756525e-52 | -8.615850e-47 |
| Msa0216340 | Msa0701800 | -0.806346 | 8.600150e-50 | -8.615850e-47 |
| Msa0216340 | Msa0702690 | -0.831668 | 1.464970e-55 | -8.615850e-47 |
| Msa0216340 | Msa0703420 | 0.803147 | 4.005020e-49 | -8.615850e-47 |
| Msa0216340 | Msa0717540 | -0.819391 | 1.190325e-52 | -8.615850e-47 |
| Msa0216340 | Msa0738460 | -0.805391 | 1.365471e-49 | -8.615850e-47 |
| Msa0216340 | Msa0742370 | -0.800654 | 1.302285e-48 | -8.615850e-47 |
| Msa0216340 | Msa0744010 | -0.812905 | 3.351299e-51 | -8.615850e-47 |
| Msa0216340 | Msa0745140 | 0.860851 | 1.547624e-63 | -8.615850e-47 |
| Msa0216340 | Msa0754020 | -0.834705 | 2.568087e-56 | -8.615850e-47 |
| Msa0216340 | Msa0758880 | -0.822739 | 2.016218e-53 | -8.615850e-47 |
| Msa0216340 | Msa0769910 | -0.846190 | 2.537063e-59 | -8.615850e-47 |
| Msa0216340 | Msa0772490 | 0.808897 | 2.470688e-50 | -8.615850e-47 |
| Msa0216340 | Msa0775660 | 0.802564 | 5.285096e-49 | -8.615850e-47 |
| Msa0216340 | Msa0776640 | 0.862960 | 3.499167e-64 | -8.615850e-47 |
| Msa0216340 | Msa0788160 | -0.825642 | 4.194032e-54 | -8.615850e-47 |
| Msa0216340 | Msa0795910 | -0.807143 | 5.838037e-50 | -8.615850e-47 |
| Msa0216340 | Msa0801920 | -0.818095 | 2.343427e-52 | -8.615850e-47 |
| Msa0216340 | Msa0802950 | -0.823773 | 1.156580e-53 | -8.615850e-47 |
| Msa0216340 | Msa0805390 | 0.802121 | 6.519204e-49 | -8.615850e-47 |
| Msa0216340 | Msa0807100 | -0.845686 | 3.478681e-59 | -8.615850e-47 |
| Msa0216340 | Msa0807870 | -0.867749 | 1.088259e-65 | -8.615850e-47 |
| Msa0216340 | Msa0825360 | -0.814103 | 1.826493e-51 | -8.615850e-47 |
| Msa0216340 | Msa0825920 | 0.863143 | 3.072283e-64 | -8.615850e-47 |
| Msa0216340 | Msa0829250 | -0.807899 | 4.033831e-50 | -8.615850e-47 |
| Msa0216340 | Msa0832160 | -0.806559 | 7.757718e-50 | -8.615850e-47 |
| Msa0216340 | Msa0832520 | 0.801809 | 7.557517e-49 | -8.615850e-47 |
| Msa0216340 | Msa0833030 | -0.827629 | 1.407687e-54 | -8.615850e-47 |
| Msa0216340 | Msa0833360 | -0.800391 | 1.473663e-48 | -8.615850e-47 |
| Msa0216340 | Msa0838120 | -0.816864 | 4.438914e-52 | -8.615850e-47 |
| Msa0216340 | Msa0848670 | -0.813708 | 2.232864e-51 | -8.615850e-47 |
| Msa0216340 | Msa0864550 | 0.830771 | 2.434484e-55 | -8.615850e-47 |
| Msa0216340 | Msa0865420 | 0.865027 | 7.950593e-65 | -8.615850e-47 |
| Msa0216340 | Msa0873940 | 0.801791 | 7.622314e-49 | -8.615850e-47 |
| Msa0216340 | Msa0880910 | 0.812075 | 5.087551e-51 | -8.615850e-47 |
| Msa0216340 | Msa0906680 | 0.812110 | 5.000533e-51 | -8.615850e-47 |
| Msa0216340 | Msa0931400 | 0.825849 | 3.746198e-54 | -8.615850e-47 |
| Msa0216340 | Msa0931550 | -0.811292 | 7.529132e-51 | -8.615850e-47 |
| Msa0216340 | Msa0941150 | -0.805584 | 1.244048e-49 | -8.615850e-47 |
| Msa0216340 | Msa0945030 | 0.801298 | 9.619250e-49 | -8.615850e-47 |
| Msa0216340 | Msa0947550 | -0.805884 | 1.076152e-49 | -8.615850e-47 |
| Msa0216340 | Msa0964400 | -0.804287 | 2.322800e-49 | -8.615850e-47 |
| Msa0216340 | Msa0967780 | 0.802386 | 5.750055e-49 | -8.615850e-47 |
| Msa0216340 | Msa0967900 | -0.826338 | 2.865806e-54 | -8.615850e-47 |
| Msa0216340 | Msa0968360 | 0.821874 | 3.200772e-53 | -8.615850e-47 |
| Msa0216340 | Msa0969380 | 0.810385 | 1.183705e-50 | -8.615850e-47 |
| Msa0216340 | Msa0969720 | 0.812696 | 3.722533e-51 | -8.615850e-47 |
| Msa0216340 | Msa0975960 | 0.814285 | 1.665001e-51 | -8.615850e-47 |
| Msa0216340 | Msa0998660 | -0.804737 | 1.871437e-49 | -8.615850e-47 |
| Msa0216340 | Msa1002970 | -0.801216 | 9.996750e-49 | -8.615850e-47 |
| Msa0216340 | Msa1013190 | 0.825305 | 5.038885e-54 | -8.615850e-47 |
| Msa0216340 | Msa1014550 | -0.827754 | 1.313758e-54 | -8.615850e-47 |
| Msa0216340 | Msa1016580 | -0.806272 | 8.914619e-50 | -8.615850e-47 |
| Msa0216340 | Msa1023210 | 0.803859 | 2.850938e-49 | -8.615850e-47 |
| Msa0216340 | Msa1028890 | -0.803258 | 3.798237e-49 | -8.615850e-47 |
| Msa0216340 | Msa1029030 | -0.815896 | 7.309577e-52 | -8.615850e-47 |
| Msa0216340 | Msa1031180 | 0.823378 | 1.430311e-53 | -8.615850e-47 |
| Msa0216340 | Msa1039440 | -0.806019 | 1.008121e-49 | -8.615850e-47 |
| Msa0216340 | Msa1044250 | 0.815076 | 1.112809e-51 | -8.615850e-47 |
| Msa0216340 | Msa1045230 | 0.820478 | 6.716754e-53 | -8.615850e-47 |
| Msa0216340 | Msa1045280 | 0.829914 | 3.943253e-55 | -8.615850e-47 |
| Msa0216340 | Msa1052000 | 0.820258 | 7.541488e-53 | -8.615850e-47 |
| Msa0216340 | Msa1055520 | -0.842108 | 3.162455e-58 | -8.615850e-47 |
| Msa0216340 | Msa1070360 | 0.807674 | 4.504686e-50 | -8.615850e-47 |
| Msa0216340 | Msa1070630 | -0.816175 | 6.330823e-52 | -8.615850e-47 |
| Msa0216340 | Msa1078590 | -0.832518 | 9.031733e-56 | -8.615850e-47 |
| Msa0216340 | Msa1078760 | -0.837477 | 5.080717e-57 | -8.615850e-47 |
| Msa0216340 | Msa1078830 | 0.837669 | 4.533866e-57 | -8.615850e-47 |
| Msa0216340 | Msa1078890 | 0.842206 | 2.979025e-58 | -8.615850e-47 |
| Msa0216340 | Msa1078940 | 0.808132 | 3.598215e-50 | -8.615850e-47 |
| Msa0216340 | Msa1081970 | 0.801454 | 8.934381e-49 | -8.615850e-47 |
| Msa0216340 | Msa1082410 | 0.815845 | 7.503903e-52 | -8.615850e-47 |
| Msa0216340 | Msa1088000 | -0.804134 | 2.499441e-49 | -8.615850e-47 |
| Msa0216340 | Msa1088400 | -0.810885 | 9.225438e-51 | -8.615850e-47 |
| Msa0216340 | Msa1093190 | -0.817011 | 4.113544e-52 | -8.615850e-47 |
| Msa0216340 | Msa1107430 | 0.807786 | 4.263007e-50 | -8.615850e-47 |
| Msa0216340 | Msa1117770 | -0.810033 | 1.409214e-50 | -8.615850e-47 |
| Msa0216340 | Msa1119430 | 0.825318 | 5.004405e-54 | -8.615850e-47 |
| Msa0216340 | Msa1121720 | -0.835699 | 1.441030e-56 | -8.615850e-47 |
| Msa0216340 | Msa1129120 | -0.831913 | 1.274911e-55 | -8.615850e-47 |
| Msa0216340 | Msa1129880 | -0.822684 | 2.077037e-53 | -8.615850e-47 |
| Msa0216340 | Msa1130910 | -0.803225 | 3.858035e-49 | -8.615850e-47 |
| Msa0216340 | Msa1132880 | -0.808622 | 2.829860e-50 | -8.615850e-47 |
| Msa0216340 | Msa1156120 | -0.832548 | 8.877094e-56 | -8.615850e-47 |
| Msa0216340 | Msa1158200 | 0.827977 | 1.160940e-54 | -8.615850e-47 |
| Msa0216340 | Msa1158450 | -0.806391 | 8.413805e-50 | -8.615850e-47 |
| Msa0216340 | Msa1165460 | 0.829334 | 5.456336e-55 | -8.615850e-47 |
| Msa0216340 | Msa1169220 | 0.830959 | 2.189419e-55 | -8.615850e-47 |
| Msa0216340 | Msa1169590 | -0.821230 | 4.508823e-53 | -8.615850e-47 |
| Msa0216340 | Msa1169660 | 0.829981 | 3.798135e-55 | -8.615850e-47 |
| Msa0216340 | Msa1175410 | 0.801253 | 9.823951e-49 | -8.615850e-47 |
| Msa0216340 | Msa1180300 | 0.808044 | 3.757477e-50 | -8.615850e-47 |
| Msa0216340 | Msa1190350 | -0.806234 | 9.081182e-50 | -8.615850e-47 |
| Msa0216340 | Msa1190730 | -0.809457 | 1.874282e-50 | -8.615850e-47 |
| Msa0216340 | Msa1191530 | -0.813523 | 2.451953e-51 | -8.615850e-47 |
| Msa0216340 | Msa1192180 | 0.852319 | 4.991332e-61 | -8.615850e-47 |
| Msa0216340 | Msa1199540 | -0.805973 | 1.030522e-49 | -8.615850e-47 |
| Msa0216340 | Msa1205270 | -0.847216 | 1.330248e-59 | -8.615850e-47 |
| Msa0216340 | Msa1207330 | 0.823233 | 1.546504e-53 | -8.615850e-47 |
| Msa0216340 | Msa1209990 | -0.829187 | 5.921429e-55 | -8.615850e-47 |
| Msa0216340 | Msa1228600 | -0.800634 | 1.314677e-48 | -8.615850e-47 |
| Msa0216340 | Msa1236190 | -0.801854 | 7.397049e-49 | -8.615850e-47 |
| Msa0216340 | Msa1240490 | 0.821167 | 4.662210e-53 | -8.615850e-47 |
| Msa0216340 | Msa1249600 | 0.803675 | 3.112452e-49 | -8.615850e-47 |
| Msa0216340 | Msa1254910 | 0.801251 | 9.831877e-49 | -8.615850e-47 |
| Msa0216340 | Msa1257570 | 0.842754 | 2.131242e-58 | -8.615850e-47 |
| Msa0216340 | Msa1259730 | 0.845917 | 3.011169e-59 | -8.615850e-47 |
| Msa0216340 | Msa1266120 | -0.822613 | 2.157071e-53 | -8.615850e-47 |
| Msa0216340 | Msa1273620 | -0.801924 | 7.157219e-49 | -8.615850e-47 |
| Msa0216340 | Msa1279200 | -0.800299 | 1.538443e-48 | -8.615850e-47 |
| Msa0216340 | Msa1295210 | -0.801605 | 8.323010e-49 | -8.615850e-47 |
| Msa0216340 | Msa1297220 | -0.822402 | 2.414287e-53 | -8.615850e-47 |
| Msa0216340 | Msa1298480 | -0.829210 | 5.845863e-55 | -8.615850e-47 |
| Msa0216340 | Msa1312770 | 0.821656 | 3.594798e-53 | -8.615850e-47 |
| Msa0216340 | Msa1315880 | -0.800254 | 1.570767e-48 | -8.615850e-47 |
| Msa0216340 | Msa1323260 | -0.838358 | 3.016115e-57 | -8.615850e-47 |
| Msa0216340 | Msa1326180 | 0.823157 | 1.610664e-53 | -8.615850e-47 |
| Msa0216340 | Msa1326780 | -0.806237 | 9.070086e-50 | -8.615850e-47 |
| Msa0216340 | Msa1327870 | 0.825566 | 4.370764e-54 | -8.615850e-47 |
| Msa0216340 | Msa1331300 | 0.836146 | 1.110489e-56 | -8.615850e-47 |
| Msa0216340 | Msa1341710 | -0.802522 | 5.390827e-49 | -8.615850e-47 |
| Msa0216340 | Msa1342110 | -0.804006 | 2.657683e-49 | -8.615850e-47 |
| Msa0216340 | Msa1342360 | -0.837483 | 5.062635e-57 | -8.615850e-47 |
| Msa0216340 | Msa1343450 | -0.800746 | 1.247192e-48 | -8.615850e-47 |
| Msa0216340 | Msa1350580 | -0.809607 | 1.740302e-50 | -8.615850e-47 |
| Msa0216340 | Msa1350700 | 0.816122 | 6.507959e-52 | -8.615850e-47 |
| Msa0216340 | Msa1352600 | -0.811343 | 7.341794e-51 | -8.615850e-47 |
| Msa0216340 | Msa1356100 | -0.834120 | 3.601577e-56 | -8.615850e-47 |
| Msa0216340 | Msa1360260 | 0.823432 | 1.389532e-53 | -8.615850e-47 |
| Msa0216340 | Msa1363310 | -0.818548 | 1.850898e-52 | -8.615850e-47 |
| Msa0216340 | Msa1365820 | 0.843304 | 1.521588e-58 | -8.615850e-47 |
| Msa0216340 | Msa1366140 | -0.811136 | 8.140413e-51 | -8.615850e-47 |
| Msa0216340 | Msa1367460 | 0.802592 | 5.215743e-49 | -8.615850e-47 |
| Msa0216340 | Msa1368390 | 0.853439 | 2.387269e-61 | -8.615850e-47 |
| Msa0216340 | Msa1375130 | 0.803926 | 2.760310e-49 | -8.615850e-47 |
| Msa0216340 | Msa1377980 | -0.833679 | 4.643738e-56 | -8.615850e-47 |
| Msa0216340 | Msa1380180 | -0.804969 | 1.673684e-49 | -8.615850e-47 |
| Msa0216340 | Msa1384410 | -0.851624 | 7.859927e-61 | -8.615850e-47 |
| Msa0216340 | Msa1384970 | -0.800368 | 1.489424e-48 | -8.615850e-47 |
| Msa0216340 | Msa1386580 | -0.816263 | 6.052932e-52 | -8.615850e-47 |
| Msa0216340 | Msa1388720 | -0.832398 | 9.669842e-56 | -8.615850e-47 |
| Msa0216340 | Msa1391500 | 0.804145 | 2.486178e-49 | -8.615850e-47 |
| Msa0216340 | Msa1402300 | 0.826731 | 2.309057e-54 | -8.615850e-47 |
| Msa0216340 | Msa1405830 | 0.803749 | 3.004827e-49 | -8.615850e-47 |
| Msa0216340 | Msa1408230 | -0.800664 | 1.296132e-48 | -8.615850e-47 |
| Msa0216340 | Msa1408280 | -0.832813 | 7.630964e-56 | -8.615850e-47 |
| Msa0216340 | Msa1408860 | -0.845166 | 4.810922e-59 | -8.615850e-47 |
| Msa0216340 | Msa1410500 | -0.802198 | 6.286031e-49 | -8.615850e-47 |
| Msa0216340 | Msa1411370 | 0.812990 | 3.210344e-51 | -8.615850e-47 |
| Msa0216340 | Msa1413150 | 0.813145 | 2.968307e-51 | -8.615850e-47 |
| Msa0216340 | Msa1414780 | -0.867640 | 1.178966e-65 | -8.615850e-47 |
| Msa0216340 | Msa1422160 | -0.807928 | 3.976959e-50 | -8.615850e-47 |
| Msa0216340 | Msa1429470 | 0.812593 | 3.921222e-51 | -8.615850e-47 |
| Msa0216340 | Msa1432730 | -0.803175 | 3.951371e-49 | -8.615850e-47 |
| Msa0216340 | Msa1433360 | 0.803115 | 4.066842e-49 | -8.615850e-47 |
| Msa0216340 | Msa1433870 | 0.807719 | 4.406544e-50 | -8.615850e-47 |
| Msa0216340 | Msa1439860 | 0.811480 | 6.853695e-51 | -8.615850e-47 |
| Msa0216340 | Msa1444130 | -0.806484 | 8.045203e-50 | -8.615850e-47 |
| Msa0216340 | Msa1453430 | 0.813237 | 2.832887e-51 | -8.615850e-47 |
| Msa0216340 | Msa1457770 | 0.847719 | 9.676865e-60 | -8.615850e-47 |
| Msa0216340 | Msa1459130 | -0.803825 | 2.897084e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216340 | MtrunA17_Chr2g0317871 | 96.632 | 386 | 13 | 0 | 1 | 386 | 1 | 386 | 0.0 | 762 |
| Msa0216340 | MtrunA17_Chr2g0317881 | 81.654 | 387 | 65 | 3 | 1 | 386 | 1 | 382 | 0.0 | 602 |
| Msa0216340 | MtrunA17_Chr2g0281871 | 46.000 | 400 | 180 | 8 | 7 | 386 | 9 | 392 | 1.22e-112 | 334 |
| Msa0216340 | MtrunA17_Chr7g0249131 | 28.738 | 428 | 224 | 15 | 1 | 379 | 1 | 396 | 3.60e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216340 | AT4G27460.1 | 51.256 | 398 | 171 | 11 | 1 | 386 | 1 | 387 | 2.02e-112 | 334 |
| Msa0216340 | AT5G53750.1 | 50.242 | 414 | 168 | 12 | 1 | 386 | 1 | 404 | 2.21e-109 | 327 |
| Msa0216340 | AT1G65320.1 | 26.790 | 433 | 229 | 14 | 1 | 379 | 1 | 399 | 1.12e-28 | 116 |
Find 110 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCATTTCTGTCATGAATA+AGG | 0.230254 | 2_1:-62117691 | Msa0216340:three_prime_UTR |
| AAGGTTGAAGGAAAAGAATT+TGG | 0.316598 | 2_1:-62118212 | Msa0216340:CDS |
| CGATGACCTTGCATACTTTC+CGG | 0.330667 | 2_1:+62118087 | None:intergenic |
| GTGTCCTTCCAAAGCTCTTA+AGG | 0.331448 | 2_1:-62119754 | Msa0216340:CDS |
| GCGAAAGTTTCGTGAGTGTT+TGG | 0.336872 | 2_1:-62119872 | Msa0216340:CDS |
| CACAGCAATCAAAGAGCTCT+TGG | 0.367612 | 2_1:+62118015 | None:intergenic |
| AATTGAAGCCTTAAGAGCTT+TGG | 0.367682 | 2_1:+62119746 | None:intergenic |
| GAGGATGATTGGAGTTTAGT+TGG | 0.388830 | 2_1:-62117947 | Msa0216340:CDS |
| AACTGTGACCACTCTGAATT+CGG | 0.389538 | 2_1:-62119849 | Msa0216340:CDS |
| GCCATCACAACTTTGTCTGC+AGG | 0.390618 | 2_1:-62118298 | Msa0216340:CDS |
| GCCCTCCAGAGGATCTAGTT+AGG | 0.395318 | 2_1:-62118246 | Msa0216340:CDS |
| CTCTACATTCCTCACATACT+TGG | 0.414784 | 2_1:+62118054 | None:intergenic |
| TGTGGGTTATTGAGGATGAT+TGG | 0.421114 | 2_1:-62117958 | Msa0216340:CDS |
| CATGACAGAAATGCATCAAA+GGG | 0.427352 | 2_1:+62117698 | None:intergenic |
| CTTCAACAGCAGAAGACGCC+TGG | 0.435308 | 2_1:+62118437 | None:intergenic |
| AGGTTCTTGCTTGGTTCCAT+TGG | 0.451234 | 2_1:-62118541 | Msa0216340:CDS |
| ATGTGTTGGGAAAATTTGTA+TGG | 0.452481 | 2_1:-62119817 | Msa0216340:CDS |
| GTCGCAATTGTCGACGGTGA+TGG | 0.453125 | 2_1:-62118382 | Msa0216340:CDS |
| TAGTGAAGCATGAAACTTGT+TGG | 0.454029 | 2_1:-62117823 | Msa0216340:three_prime_UTR |
| CCATCACAACTTTGTCTGCA+GGG | 0.469362 | 2_1:-62118297 | Msa0216340:CDS |
| TAATAGAGTGAATTACTTGT+GGG | 0.472091 | 2_1:-62117975 | Msa0216340:CDS |
| CTCCATTGATTACTCTTCCC+AGG | 0.476252 | 2_1:-62118455 | Msa0216340:CDS |
| GGTTGTAAAGGCAAGGTTGA+AGG | 0.477069 | 2_1:-62118224 | Msa0216340:CDS |
| ATCAACCTTATTCAAAACAT+TGG | 0.479230 | 2_1:+62119722 | None:intergenic |
| GCCATTGATCTCATACTTGA+GGG | 0.480304 | 2_1:-62118700 | Msa0216340:CDS |
| TGCAAAGATTGACGCGGCGG+CGG | 0.485036 | 2_1:+62120015 | None:intergenic |
| GAATTACTTGTGGGTTATTG+AGG | 0.486011 | 2_1:-62117966 | Msa0216340:CDS |
| AACTTTCGCCGCCGGAGCTA+CGG | 0.487382 | 2_1:+62119886 | None:intergenic |
| GATGTGATCAGGTTCTTGCT+TGG | 0.488754 | 2_1:-62118550 | Msa0216340:CDS |
| TCGCAATTGTCGACGGTGAT+GGG | 0.493159 | 2_1:-62118381 | Msa0216340:CDS |
| GCGAGGAGTTTGACACGGTC+CGG | 0.494146 | 2_1:-62118106 | Msa0216340:CDS |
| ATTGAAGTCCTCCGTAGCTC+CGG | 0.495539 | 2_1:-62119897 | Msa0216340:CDS |
| TTCATCTGATGAGGACAGTC+CGG | 0.496147 | 2_1:-62118128 | Msa0216340:CDS |
| TCGGTCGATGTCAATGTGTT+GGG | 0.498270 | 2_1:-62119830 | Msa0216340:CDS |
| CCCTCCAGAGGATCTAGTTA+GGG | 0.498391 | 2_1:-62118245 | Msa0216340:CDS |
| AACAGAAAGACCACATTCAC+AGG | 0.502709 | 2_1:+62117800 | None:intergenic |
| AGACGATCGATGGATTGTGC+AGG | 0.510025 | 2_1:+62118502 | None:intergenic |
| AGGGACAAGAACTATGATAC+AGG | 0.522380 | 2_1:+62117650 | None:intergenic |
| GGATCTAGTTAGGGTTGTAA+AGG | 0.524022 | 2_1:-62118236 | Msa0216340:CDS |
| ACAGCAATCAAAGAGCTCTT+GGG | 0.525945 | 2_1:+62118016 | None:intergenic |
| AATAAATGGTACCTAGATGA+AGG | 0.528220 | 2_1:+62119678 | None:intergenic |
| TTGTGTGAGGGACTTTGAGA+TGG | 0.531894 | 2_1:+62118414 | None:intergenic |
| CCCCTCAAGTATGAGATCAA+TGG | 0.534194 | 2_1:+62118699 | None:intergenic |
| CTAATAGAGTGAATTACTTG+TGG | 0.535417 | 2_1:-62117976 | Msa0216340:CDS |
| ACAACCCTAACTAGATCCTC+TGG | 0.535562 | 2_1:+62118241 | None:intergenic |
| TCATGACAGAAATGCATCAA+AGG | 0.537397 | 2_1:+62117697 | None:intergenic |
| TTCATCTAGAACCTTCATCT+AGG | 0.539213 | 2_1:-62119689 | Msa0216340:intron |
| TGCCATTGATCTCATACTTG+AGG | 0.539564 | 2_1:-62118701 | Msa0216340:CDS |
| CATCACAACTTTGTCTGCAG+GGG | 0.540551 | 2_1:-62118296 | Msa0216340:CDS |
| GACGGTGATGGGACATTCAT+CGG | 0.542508 | 2_1:-62118370 | Msa0216340:CDS |
| TTCGGTCGATGTCAATGTGT+TGG | 0.548896 | 2_1:-62119831 | Msa0216340:CDS |
| TAACACAAGAGGATGTGATC+AGG | 0.550433 | 2_1:-62118561 | Msa0216340:CDS |
| ATCACAACTTTGTCTGCAGG+GGG | 0.551619 | 2_1:-62118295 | Msa0216340:CDS |
| GATAATATTGAGACGATCGA+TGG | 0.553025 | 2_1:+62118492 | None:intergenic |
| TGCAGTGTGGCTGATGAGGC+CGG | 0.553949 | 2_1:-62117768 | Msa0216340:three_prime_UTR |
| CCCTGCAGACAAAGTTGTGA+TGG | 0.558905 | 2_1:+62118297 | None:intergenic |
| GAGTGCACTGAAGCGGCCAA+TGG | 0.559548 | 2_1:+62118525 | None:intergenic |
| ACAACGGTGTTGAGTTCTGT+TGG | 0.560590 | 2_1:-62118585 | Msa0216340:CDS |
| CGCCTGGGAAGAGTAATCAA+TGG | 0.562410 | 2_1:+62118453 | None:intergenic |
| CCGCCGCGTCAATCTTTGCA+TGG | 0.563439 | 2_1:-62120012 | Msa0216340:exon |
| CGACAGAAGTTTGTTGTGTG+AGG | 0.567673 | 2_1:+62118401 | None:intergenic |
| ATCACAACATGCAAGTGTGA+AGG | 0.567692 | 2_1:+62118336 | None:intergenic |
| AACTTGTTGGCCTGTGAATG+TGG | 0.567954 | 2_1:-62117810 | Msa0216340:three_prime_UTR |
| GAGTTATCTGATCTCTGTCT+CGG | 0.569037 | 2_1:-62119969 | Msa0216340:CDS |
| TAGTTAGGGTTGTAAAGGCA+AGG | 0.569328 | 2_1:-62118231 | Msa0216340:CDS |
| ATCCTCCTCTTCATCTGATG+AGG | 0.578040 | 2_1:-62118137 | Msa0216340:CDS |
| GACCGTGTCAAACTCCTCGC+CGG | 0.578167 | 2_1:+62118109 | None:intergenic |
| TGCAAGGTCATCGAGCTACT+CGG | 0.582724 | 2_1:-62118077 | Msa0216340:CDS |
| TTTCGCCGCCGGAGCTACGG+AGG | 0.585312 | 2_1:+62119889 | None:intergenic |
| TCGTCTCAATATTATCAGCT+CGG | 0.585428 | 2_1:-62118485 | Msa0216340:CDS |
| GTTCTGTTGGTTAACACAAG+AGG | 0.588395 | 2_1:-62118572 | Msa0216340:CDS |
| ATGTTGTGATGAGACGGTTG+CGG | 0.588683 | 2_1:-62118323 | Msa0216340:CDS |
| TTCAACAGCAGAAGACGCCT+GGG | 0.592455 | 2_1:+62118438 | None:intergenic |
| GTGCAGGGAGTGCACTGAAG+CGG | 0.593463 | 2_1:+62118518 | None:intergenic |
| GACTTCAATTGCCTCAGCGA+CGG | 0.595693 | 2_1:+62119911 | None:intergenic |
| GTCCTCATCAGATGAAGAGG+AGG | 0.596841 | 2_1:+62118135 | None:intergenic |
| TCACAACATGCAAGTGTGAA+GGG | 0.596883 | 2_1:+62118337 | None:intergenic |
| ACTGTCCTCATCAGATGAAG+AGG | 0.604105 | 2_1:+62118132 | None:intergenic |
| GACGATCGATGGATTGTGCA+GGG | 0.604203 | 2_1:+62118503 | None:intergenic |
| GAAGTCCTCCGTAGCTCCGG+CGG | 0.605794 | 2_1:-62119894 | Msa0216340:CDS |
| GACAGAAGTTTGTTGTGTGA+GGG | 0.606973 | 2_1:+62118402 | None:intergenic |
| ACTTCTGTCGCAATTGTCGA+CGG | 0.609437 | 2_1:-62118388 | Msa0216340:CDS |
| CACGGTCCGGAAAGTATGCA+AGG | 0.614793 | 2_1:-62118093 | Msa0216340:CDS |
| AGGGCGACCACAGTCAATGT+AGG | 0.615124 | 2_1:+62118264 | None:intergenic |
| GAAGCCTTAAGAGCTTTGGA+AGG | 0.616878 | 2_1:+62119750 | None:intergenic |
| TGACTGTGGTCGCCCTCCAG+AGG | 0.619657 | 2_1:-62118257 | Msa0216340:CDS |
| ACTCACGAAACTTTCGCCGC+CGG | 0.623945 | 2_1:+62119878 | None:intergenic |
| AACAGAACTCAACACCGTTG+TGG | 0.629524 | 2_1:+62118587 | None:intergenic |
| TAACTGCAGTGTGGCTGATG+AGG | 0.632164 | 2_1:-62117772 | Msa0216340:three_prime_UTR |
| ACCCTAACTAGATCCTCTGG+AGG | 0.646675 | 2_1:+62118244 | None:intergenic |
| AGAGGAGGATGACATATCAC+CGG | 0.649223 | 2_1:+62118150 | None:intergenic |
| GCTACTCGGCCAAGTATGTG+AGG | 0.650705 | 2_1:-62118063 | Msa0216340:CDS |
| CATTGATCTCATACTTGAGG+GGG | 0.653452 | 2_1:-62118698 | Msa0216340:CDS |
| CAAGTATGTGAGGAATGTAG+AGG | 0.658949 | 2_1:-62118053 | Msa0216340:CDS |
| GTTGAAGTCTCTTTCGACGT+CGG | 0.664095 | 2_1:-62119937 | Msa0216340:CDS |
| ACTTGCATGTTGTGATGAGA+CGG | 0.665678 | 2_1:-62118329 | Msa0216340:CDS |
| GACGTCGGCTACCGTCGCTG+AGG | 0.669519 | 2_1:-62119922 | Msa0216340:CDS |
| GTCGAAAGAGACTTCAACGG+CGG | 0.670373 | 2_1:+62119942 | None:intergenic |
| CCATTGATCTCATACTTGAG+GGG | 0.673886 | 2_1:-62118699 | Msa0216340:CDS |
| CCCTAACTAGATCCTCTGGA+GGG | 0.680964 | 2_1:+62118245 | None:intergenic |
| TTGATGGCCTACATTGACTG+TGG | 0.683351 | 2_1:-62118271 | Msa0216340:CDS |
| CCATGCAAAGATTGACGCGG+CGG | 0.686517 | 2_1:+62120012 | None:intergenic |
| CTTCCATGCAAAGATTGACG+CGG | 0.694556 | 2_1:+62120009 | None:intergenic |
| ATGACAGAAATGCATCAAAG+GGG | 0.705982 | 2_1:+62117699 | None:intergenic |
| GTCCGGCGAGGAGTTTGACA+CGG | 0.708960 | 2_1:-62118111 | Msa0216340:CDS |
| TTAACAATCAACAGCCACAA+CGG | 0.709558 | 2_1:-62118601 | Msa0216340:CDS |
| TGTTATGAATAACTGCAGTG+TGG | 0.714149 | 2_1:-62117781 | Msa0216340:three_prime_UTR |
| GACGTCGAAAGAGACTTCAA+CGG | 0.724372 | 2_1:+62119939 | None:intergenic |
| GACATCGACCGAATTCAGAG+TGG | 0.726107 | 2_1:+62119841 | None:intergenic |
| CTGATGAGGACAGTCCGGCG+AGG | 0.730013 | 2_1:-62118123 | Msa0216340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAATAAACAAATAAA+TGG | + | chr2_1:62117979-62117998 | None:intergenic | 10.0% |
| !!! | AAACTTGAAATTGTATTTTT+TGG | - | chr2_1:62118743-62118762 | Msa0216340:intron | 15.0% |
| !!! | AACTTGAAATTGTATTTTTT+GGG | - | chr2_1:62118744-62118763 | Msa0216340:intron | 15.0% |
| !!! | AATTTCCAATGTTTTGAATA+AGG | - | chr2_1:62117913-62117932 | Msa0216340:CDS | 20.0% |
| !! | AATAACCAATATTATTTACG+TGG | + | chr2_1:62118041-62118060 | None:intergenic | 20.0% |
| !!! | AATAATGTTTGTCATTGATT+TGG | - | chr2_1:62118123-62118142 | Msa0216340:CDS | 20.0% |
| !! | TTGTTTACACTCAAAATTTA+TGG | - | chr2_1:62118324-62118343 | Msa0216340:CDS | 20.0% |
| !!! | AATGTAAAATGATTTGTGTT+TGG | + | chr2_1:62118370-62118389 | None:intergenic | 20.0% |
| !!! | TATAATGTGTTTGATTTACA+TGG | - | chr2_1:62118540-62118559 | Msa0216340:CDS | 20.0% |
| !! | ATGAAAATCCTTAAAAAAAG+AGG | - | chr2_1:62118664-62118683 | Msa0216340:CDS | 20.0% |
| !!! | TACATATTCCTCTTTTTTTA+AGG | + | chr2_1:62118675-62118694 | None:intergenic | 20.0% |
| !! | TCATTTAGAAACATATGATT+CGG | + | chr2_1:62118724-62118743 | None:intergenic | 20.0% |
| !!! | ACTTGAAATTGTATTTTTTG+GGG | - | chr2_1:62118745-62118764 | Msa0216340:intron | 20.0% |
| !!! | TACTTTTTCTAATATCTTGA+AGG | - | chr2_1:62119722-62119741 | Msa0216340:CDS | 20.0% |
| !!! | TTTTCAAAGAAAACATTTGA+GGG | + | chr2_1:62120012-62120031 | None:intergenic | 20.0% |
| !!! | ATTTTCAAAGAAAACATTTG+AGG | + | chr2_1:62120013-62120032 | None:intergenic | 20.0% |
| !! | AAAGATTTTGTTCTTTGCAA+AGG | + | chr2_1:62117865-62117884 | None:intergenic | 25.0% |
| ! | ATCAACCTTATTCAAAACAT+TGG | + | chr2_1:62117921-62117940 | None:intergenic | 25.0% |
| !!! | AATGTTTTGAATAAGGTTGA+TGG | - | chr2_1:62117920-62117939 | Msa0216340:CDS | 25.0% |
| !!! | TGTCATTGATTTGGATTAAA+CGG | - | chr2_1:62118132-62118151 | Msa0216340:CDS | 25.0% |
| ! | ATACACCTCTATAATCAATT+TGG | + | chr2_1:62118159-62118178 | None:intergenic | 25.0% |
| !! | AATTGATTCTATTGAGTGTT+TGG | - | chr2_1:62118301-62118320 | Msa0216340:CDS | 25.0% |
| ! | TCAACAATTAAGTGTATGTT+TGG | + | chr2_1:62118428-62118447 | None:intergenic | 25.0% |
| !! | TGAATTTGAAATTTGCTTTC+AGG | - | chr2_1:62118486-62118505 | Msa0216340:CDS | 25.0% |
| !!! | TGATATTTGTTGTAGTTTTG+AGG | - | chr2_1:62118513-62118532 | Msa0216340:CDS | 25.0% |
| !!! | GATATTTGTTGTAGTTTTGA+GGG | - | chr2_1:62118514-62118533 | Msa0216340:CDS | 25.0% |
| ! | AAACTCATACTCAAAATCAA+GGG | + | chr2_1:62118583-62118602 | None:intergenic | 25.0% |
| ! | AAAACTCATACTCAAAATCA+AGG | + | chr2_1:62118584-62118603 | None:intergenic | 25.0% |
| ! | CATTTAGAAACATATGATTC+GGG | + | chr2_1:62118723-62118742 | None:intergenic | 25.0% |
| !!! | CTTGAAATTGTATTTTTTGG+GGG | - | chr2_1:62118746-62118765 | Msa0216340:intron | 25.0% |
| !!! | TTGAAATTGTATTTTTTGGG+GGG | - | chr2_1:62118747-62118766 | Msa0216340:intron | 25.0% |
| ! | TAACATCAAAATAACAAGGA+GGG | + | chr2_1:62118907-62118926 | None:intergenic | 25.0% |
| !!! | ATTTTGATGTTACAGCTTAT+TGG | - | chr2_1:62118915-62118934 | Msa0216340:intron | 25.0% |
| ! | TAATAGAGTGAATTACTTGT+GGG | - | chr2_1:62119665-62119684 | Msa0216340:intron | 25.0% |
| ! | ATAAAGCAAAAACAAAGATC+CGG | + | chr2_1:62119894-62119913 | None:intergenic | 25.0% |
| ATGTGTTGGGAAAATTTGTA+TGG | - | chr2_1:62117823-62117842 | Msa0216340:three_prime_UTR | 30.0% | |
| AATAAATGGTACCTAGATGA+AGG | + | chr2_1:62117965-62117984 | None:intergenic | 30.0% | |
| TCACACCACGTAAATAATAT+TGG | - | chr2_1:62118033-62118052 | Msa0216340:CDS | 30.0% | |
| GTAACATCAAAATAACAAGG+AGG | + | chr2_1:62118908-62118927 | None:intergenic | 30.0% | |
| GCTGTAACATCAAAATAACA+AGG | + | chr2_1:62118911-62118930 | None:intergenic | 30.0% | |
| AAGGTTGAAGGAAAAGAATT+TGG | - | chr2_1:62119428-62119447 | Msa0216340:intron | 30.0% | |
| CTAATAGAGTGAATTACTTG+TGG | - | chr2_1:62119664-62119683 | Msa0216340:intron | 30.0% | |
| ATGCATTTCTGTCATGAATA+AGG | - | chr2_1:62119949-62119968 | Msa0216340:CDS | 30.0% | |
| AATTGAAGCCTTAAGAGCTT+TGG | + | chr2_1:62117897-62117916 | None:intergenic | 35.0% | |
| ! | TTCATCTAGAACCTTCATCT+AGG | - | chr2_1:62117951-62117970 | Msa0216340:CDS | 35.0% |
| ACGGTCCAAATTGATTATAG+AGG | - | chr2_1:62118151-62118170 | Msa0216340:CDS | 35.0% | |
| !! | TCTGATTTTGACATGTTGTC+AGG | - | chr2_1:62118257-62118276 | Msa0216340:CDS | 35.0% |
| !! | TAAGTGTATGTTTGGTTCTG+AGG | + | chr2_1:62118420-62118439 | None:intergenic | 35.0% |
| !!! | ATTTTTTGGGGGGTAAGTTT+TGG | - | chr2_1:62118757-62118776 | Msa0216340:intron | 35.0% |
| TGGAATTGATTGACATGGAA+AGG | - | chr2_1:62118784-62118803 | Msa0216340:intron | 35.0% | |
| GGAATTGATTGACATGGAAA+GGG | - | chr2_1:62118785-62118804 | Msa0216340:intron | 35.0% | |
| GAATTGATTGACATGGAAAG+GGG | - | chr2_1:62118786-62118805 | Msa0216340:intron | 35.0% | |
| !!! | CCTTTTTTTGTCTGCGAAAT+TGG | + | chr2_1:62118985-62119004 | None:intergenic | 35.0% |
| CCAATTTCGCAGACAAAAAA+AGG | - | chr2_1:62118982-62119001 | Msa0216340:intron | 35.0% | |
| ATTTCGCAGACAAAAAAAGG+TGG | - | chr2_1:62118985-62119004 | Msa0216340:intron | 35.0% | |
| TTAACAATCAACAGCCACAA+CGG | - | chr2_1:62119039-62119058 | Msa0216340:intron | 35.0% | |
| GATAATATTGAGACGATCGA+TGG | + | chr2_1:62119151-62119170 | None:intergenic | 35.0% | |
| TCGTCTCAATATTATCAGCT+CGG | - | chr2_1:62119155-62119174 | Msa0216340:intron | 35.0% | |
| ! | GAATTACTTGTGGGTTATTG+AGG | - | chr2_1:62119674-62119693 | Msa0216340:intron | 35.0% |
| TAGTGAAGCATGAAACTTGT+TGG | - | chr2_1:62119817-62119836 | Msa0216340:CDS | 35.0% | |
| TGTTATGAATAACTGCAGTG+TGG | - | chr2_1:62119859-62119878 | Msa0216340:CDS | 35.0% | |
| ATGACAGAAATGCATCAAAG+GGG | + | chr2_1:62119944-62119963 | None:intergenic | 35.0% | |
| CATGACAGAAATGCATCAAA+GGG | + | chr2_1:62119945-62119964 | None:intergenic | 35.0% | |
| TCATGACAGAAATGCATCAA+AGG | + | chr2_1:62119946-62119965 | None:intergenic | 35.0% | |
| GAGTTATCTGATCTCTGTCT+CGG | - | chr2_1:62117671-62117690 | Msa0216340:three_prime_UTR | 40.0% | |
| AACTGTGACCACTCTGAATT+CGG | - | chr2_1:62117791-62117810 | Msa0216340:three_prime_UTR | 40.0% | |
| !! | GATTTTGACATGTTGTCAGG+TGG | - | chr2_1:62118260-62118279 | Msa0216340:CDS | 40.0% |
| GAGTGTGGAATTGATTGACA+TGG | - | chr2_1:62118779-62118798 | Msa0216340:intron | 40.0% | |
| TGCCATTGATCTCATACTTG+AGG | - | chr2_1:62118939-62118958 | Msa0216340:intron | 40.0% | |
| GCCATTGATCTCATACTTGA+GGG | - | chr2_1:62118940-62118959 | Msa0216340:intron | 40.0% | |
| CCATTGATCTCATACTTGAG+GGG | - | chr2_1:62118941-62118960 | Msa0216340:intron | 40.0% | |
| CATTGATCTCATACTTGAGG+GGG | - | chr2_1:62118942-62118961 | Msa0216340:intron | 40.0% | |
| CAAAAAAAGGTGGCCTTTCA+AGG | - | chr2_1:62118995-62119014 | Msa0216340:intron | 40.0% | |
| ! | GTTCTGTTGGTTAACACAAG+AGG | - | chr2_1:62119068-62119087 | Msa0216340:intron | 40.0% |
| TAACACAAGAGGATGTGATC+AGG | - | chr2_1:62119079-62119098 | Msa0216340:intron | 40.0% | |
| !! | GACAGAAGTTTGTTGTGTGA+GGG | + | chr2_1:62119241-62119260 | None:intergenic | 40.0% |
| TCACAACATGCAAGTGTGAA+GGG | + | chr2_1:62119306-62119325 | None:intergenic | 40.0% | |
| ATCACAACATGCAAGTGTGA+AGG | + | chr2_1:62119307-62119326 | None:intergenic | 40.0% | |
| ACTTGCATGTTGTGATGAGA+CGG | - | chr2_1:62119311-62119330 | Msa0216340:intron | 40.0% | |
| GGATCTAGTTAGGGTTGTAA+AGG | - | chr2_1:62119404-62119423 | Msa0216340:intron | 40.0% | |
| TAGTTAGGGTTGTAAAGGCA+AGG | - | chr2_1:62119409-62119428 | Msa0216340:intron | 40.0% | |
| !!! | ACGCTTTTGACTTCTTTGAC+CGG | - | chr2_1:62119471-62119490 | Msa0216340:intron | 40.0% |
| CTCTACATTCCTCACATACT+TGG | + | chr2_1:62119589-62119608 | None:intergenic | 40.0% | |
| CAAGTATGTGAGGAATGTAG+AGG | - | chr2_1:62119587-62119606 | Msa0216340:intron | 40.0% | |
| ACAGCAATCAAAGAGCTCTT+GGG | + | chr2_1:62119627-62119646 | None:intergenic | 40.0% | |
| ! | TGTGGGTTATTGAGGATGAT+TGG | - | chr2_1:62119682-62119701 | Msa0216340:intron | 40.0% |
| GAGGATGATTGGAGTTTAGT+TGG | - | chr2_1:62119693-62119712 | Msa0216340:CDS | 40.0% | |
| AACAGAAAGACCACATTCAC+AGG | + | chr2_1:62119843-62119862 | None:intergenic | 40.0% | |
| AGGGACAAGAACTATGATAC+AGG | + | chr2_1:62119993-62120012 | None:intergenic | 40.0% | |
| !! | CGGCGGAGAGAATTTTGAAA+CGG | + | chr2_1:62117611-62117630 | None:intergenic | 45.0% |
| CTTCCATGCAAAGATTGACG+CGG | + | chr2_1:62117634-62117653 | None:intergenic | 45.0% | |
| GACGTCGAAAGAGACTTCAA+CGG | + | chr2_1:62117704-62117723 | None:intergenic | 45.0% | |
| GTTGAAGTCTCTTTCGACGT+CGG | - | chr2_1:62117703-62117722 | Msa0216340:three_prime_UTR | 45.0% | |
| GCGAAAGTTTCGTGAGTGTT+TGG | - | chr2_1:62117768-62117787 | Msa0216340:three_prime_UTR | 45.0% | |
| TTCGGTCGATGTCAATGTGT+TGG | - | chr2_1:62117809-62117828 | Msa0216340:three_prime_UTR | 45.0% | |
| TCGGTCGATGTCAATGTGTT+GGG | - | chr2_1:62117810-62117829 | Msa0216340:three_prime_UTR | 45.0% | |
| GTGTCCTTCCAAAGCTCTTA+AGG | - | chr2_1:62117886-62117905 | Msa0216340:exon | 45.0% | |
| !! | GAAGCCTTAAGAGCTTTGGA+AGG | + | chr2_1:62117893-62117912 | None:intergenic | 45.0% |
| TTGATTGACATGGAAAGGGG+TGG | - | chr2_1:62118789-62118808 | Msa0216340:intron | 45.0% | |
| TGATTGACATGGAAAGGGGT+GGG | - | chr2_1:62118790-62118809 | Msa0216340:intron | 45.0% | |
| CCCCTCAAGTATGAGATCAA+TGG | + | chr2_1:62118944-62118963 | None:intergenic | 45.0% | |
| ! | GCTGCAGTTTTCTCCTTGAA+AGG | + | chr2_1:62119011-62119030 | None:intergenic | 45.0% |
| AACAGAACTCAACACCGTTG+TGG | + | chr2_1:62119056-62119075 | None:intergenic | 45.0% | |
| ! | ACAACGGTGTTGAGTTCTGT+TGG | - | chr2_1:62119055-62119074 | Msa0216340:intron | 45.0% |
| GATGTGATCAGGTTCTTGCT+TGG | - | chr2_1:62119090-62119109 | Msa0216340:intron | 45.0% | |
| AGGTTCTTGCTTGGTTCCAT+TGG | - | chr2_1:62119099-62119118 | Msa0216340:intron | 45.0% | |
| ! | CTCCATTGATTACTCTTCCC+AGG | - | chr2_1:62119185-62119204 | Msa0216340:intron | 45.0% |
| ! | TTGTGTGAGGGACTTTGAGA+TGG | + | chr2_1:62119229-62119248 | None:intergenic | 45.0% |
| !! | CGACAGAAGTTTGTTGTGTG+AGG | + | chr2_1:62119242-62119261 | None:intergenic | 45.0% |
| ACTTCTGTCGCAATTGTCGA+CGG | - | chr2_1:62119252-62119271 | Msa0216340:intron | 45.0% | |
| ATGTTGTGATGAGACGGTTG+CGG | - | chr2_1:62119317-62119336 | Msa0216340:intron | 45.0% | |
| CCATCACAACTTTGTCTGCA+GGG | - | chr2_1:62119343-62119362 | Msa0216340:intron | 45.0% | |
| CATCACAACTTTGTCTGCAG+GGG | - | chr2_1:62119344-62119363 | Msa0216340:intron | 45.0% | |
| ATCACAACTTTGTCTGCAGG+GGG | - | chr2_1:62119345-62119364 | Msa0216340:intron | 45.0% | |
| ! | TTGATGGCCTACATTGACTG+TGG | - | chr2_1:62119369-62119388 | Msa0216340:intron | 45.0% |
| ACAACCCTAACTAGATCCTC+TGG | + | chr2_1:62119402-62119421 | None:intergenic | 45.0% | |
| GGTTGTAAAGGCAAGGTTGA+AGG | - | chr2_1:62119416-62119435 | Msa0216340:intron | 45.0% | |
| AGAGGAGGATGACATATCAC+CGG | + | chr2_1:62119493-62119512 | None:intergenic | 45.0% | |
| ATCCTCCTCTTCATCTGATG+AGG | - | chr2_1:62119503-62119522 | Msa0216340:intron | 45.0% | |
| ACTGTCCTCATCAGATGAAG+AGG | + | chr2_1:62119511-62119530 | None:intergenic | 45.0% | |
| TTCATCTGATGAGGACAGTC+CGG | - | chr2_1:62119512-62119531 | Msa0216340:intron | 45.0% | |
| CGATGACCTTGCATACTTTC+CGG | + | chr2_1:62119556-62119575 | None:intergenic | 45.0% | |
| CACAGCAATCAAAGAGCTCT+TGG | + | chr2_1:62119628-62119647 | None:intergenic | 45.0% | |
| !! | AACTTGTTGGCCTGTGAATG+TGG | - | chr2_1:62119830-62119849 | Msa0216340:CDS | 45.0% |
| GTCGAAAGAGACTTCAACGG+CGG | + | chr2_1:62117701-62117720 | None:intergenic | 50.0% | |
| GACTTCAATTGCCTCAGCGA+CGG | + | chr2_1:62117732-62117751 | None:intergenic | 50.0% | |
| ATTGAAGTCCTCCGTAGCTC+CGG | - | chr2_1:62117743-62117762 | Msa0216340:three_prime_UTR | 50.0% | |
| GACATCGACCGAATTCAGAG+TGG | + | chr2_1:62117802-62117821 | None:intergenic | 50.0% | |
| !! | GACGATCGATGGATTGTGCA+GGG | + | chr2_1:62119140-62119159 | None:intergenic | 50.0% |
| !! | AGACGATCGATGGATTGTGC+AGG | + | chr2_1:62119141-62119160 | None:intergenic | 50.0% |
| CGCCTGGGAAGAGTAATCAA+TGG | + | chr2_1:62119190-62119209 | None:intergenic | 50.0% | |
| TTCAACAGCAGAAGACGCCT+GGG | + | chr2_1:62119205-62119224 | None:intergenic | 50.0% | |
| TCGCAATTGTCGACGGTGAT+GGG | - | chr2_1:62119259-62119278 | Msa0216340:intron | 50.0% | |
| !! | GACGGTGATGGGACATTCAT+CGG | - | chr2_1:62119270-62119289 | Msa0216340:intron | 50.0% |
| GCCATCACAACTTTGTCTGC+AGG | - | chr2_1:62119342-62119361 | Msa0216340:intron | 50.0% | |
| CCCTGCAGACAAAGTTGTGA+TGG | + | chr2_1:62119346-62119365 | None:intergenic | 50.0% | |
| CCCTAACTAGATCCTCTGGA+GGG | + | chr2_1:62119398-62119417 | None:intergenic | 50.0% | |
| CCCTCCAGAGGATCTAGTTA+GGG | - | chr2_1:62119395-62119414 | Msa0216340:intron | 50.0% | |
| ACCCTAACTAGATCCTCTGG+AGG | + | chr2_1:62119399-62119418 | None:intergenic | 50.0% | |
| GTCCTCATCAGATGAAGAGG+AGG | + | chr2_1:62119508-62119527 | None:intergenic | 50.0% | |
| TGCAAGGTCATCGAGCTACT+CGG | - | chr2_1:62119563-62119582 | Msa0216340:intron | 50.0% | |
| TAACTGCAGTGTGGCTGATG+AGG | - | chr2_1:62119868-62119887 | Msa0216340:CDS | 50.0% | |
| CCATGCAAAGATTGACGCGG+CGG | + | chr2_1:62117631-62117650 | None:intergenic | 55.0% | |
| ACTCACGAAACTTTCGCCGC+CGG | + | chr2_1:62117765-62117784 | None:intergenic | 55.0% | |
| !!! | GGGGGGTAAGTTTTGGAGTG+TGG | - | chr2_1:62118764-62118783 | Msa0216340:intron | 55.0% |
| CTTCAACAGCAGAAGACGCC+TGG | + | chr2_1:62119206-62119225 | None:intergenic | 55.0% | |
| GTCGCAATTGTCGACGGTGA+TGG | - | chr2_1:62119258-62119277 | Msa0216340:intron | 55.0% | |
| TTTGTCTGCAGGGGGCTTGA+TGG | - | chr2_1:62119353-62119372 | Msa0216340:intron | 55.0% | |
| AGGGCGACCACAGTCAATGT+AGG | + | chr2_1:62119379-62119398 | None:intergenic | 55.0% | |
| GCCCTCCAGAGGATCTAGTT+AGG | - | chr2_1:62119394-62119413 | Msa0216340:intron | 55.0% | |
| ! | CACGGTCCGGAAAGTATGCA+AGG | - | chr2_1:62119547-62119566 | Msa0216340:intron | 55.0% |
| GCTACTCGGCCAAGTATGTG+AGG | - | chr2_1:62119577-62119596 | Msa0216340:intron | 55.0% | |
| TGCAAAGATTGACGCGGCGG+CGG | + | chr2_1:62117628-62117647 | None:intergenic | 60.0% | |
| CCGCCGCGTCAATCTTTGCA+TGG | - | chr2_1:62117628-62117647 | Msa0216340:three_prime_UTR | 60.0% | |
| AACTTTCGCCGCCGGAGCTA+CGG | + | chr2_1:62117757-62117776 | None:intergenic | 60.0% | |
| ! | TGAGGGGGCACAGAATCTCG+TGG | - | chr2_1:62118957-62118976 | Msa0216340:intron | 60.0% |
| GAGTGCACTGAAGCGGCCAA+TGG | + | chr2_1:62119118-62119137 | None:intergenic | 60.0% | |
| ! | GTGCAGGGAGTGCACTGAAG+CGG | + | chr2_1:62119125-62119144 | None:intergenic | 60.0% |
| GTCCGGCGAGGAGTTTGACA+CGG | - | chr2_1:62119529-62119548 | Msa0216340:intron | 60.0% | |
| GACCGTGTCAAACTCCTCGC+CGG | + | chr2_1:62119534-62119553 | None:intergenic | 60.0% | |
| GCGAGGAGTTTGACACGGTC+CGG | - | chr2_1:62119534-62119553 | Msa0216340:intron | 60.0% | |
| TGCAGTGTGGCTGATGAGGC+CGG | - | chr2_1:62119872-62119891 | Msa0216340:CDS | 60.0% | |
| GAAGTCCTCCGTAGCTCCGG+CGG | - | chr2_1:62117746-62117765 | Msa0216340:three_prime_UTR | 65.0% | |
| TGACTGTGGTCGCCCTCCAG+AGG | - | chr2_1:62119383-62119402 | Msa0216340:intron | 65.0% | |
| CTGATGAGGACAGTCCGGCG+AGG | - | chr2_1:62119517-62119536 | Msa0216340:intron | 65.0% | |
| ! | GACGTCGGCTACCGTCGCTG+AGG | - | chr2_1:62117718-62117737 | Msa0216340:three_prime_UTR | 70.0% |
| TTTCGCCGCCGGAGCTACGG+AGG | + | chr2_1:62117754-62117773 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 62117570 | 62120092 | 62117570 | ID=Msa0216340;Name=Msa0216340 |
| chr2_1 | mRNA | 62117570 | 62120092 | 62117570 | ID=Msa0216340-mRNA-1;Parent=Msa0216340;Name=Msa0216340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=77|1|1|1|1|1|2|328|386 |
| chr2_1 | exon | 62117570 | 62118732 | 62117570 | ID=Msa0216340-mRNA-1:exon:17236;Parent=Msa0216340-mRNA-1 |
| chr2_1 | exon | 62119690 | 62120092 | 62119690 | ID=Msa0216340-mRNA-1:exon:17235;Parent=Msa0216340-mRNA-1 |
| chr2_1 | five_prime_UTR | 62120016 | 62120092 | 62120016 | ID=Msa0216340-mRNA-1:five_prime_utr;Parent=Msa0216340-mRNA-1 |
| chr2_1 | CDS | 62119690 | 62120015 | 62119690 | ID=Msa0216340-mRNA-1:cds;Parent=Msa0216340-mRNA-1 |
| chr2_1 | CDS | 62117898 | 62118732 | 62117898 | ID=Msa0216340-mRNA-1:cds;Parent=Msa0216340-mRNA-1 |
| chr2_1 | three_prime_UTR | 62117570 | 62117897 | 62117570 | ID=Msa0216340-mRNA-1:three_prime_utr;Parent=Msa0216340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
