AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0597700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0597700 MtrunA17_Chr4g0020581 98.690 458 6 0 1 458 1 458 0.0 932
Msa0597700 MtrunA17_Chr7g0257111 84.444 450 70 0 8 457 8 457 0.0 797
Msa0597700 MtrunA17_Chr6g0458181 26.225 408 208 19 29 413 19 356 1.77e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0597700 AT2G41540.3 84.000 450 72 0 7 456 12 461 0.0 770
Msa0597700 AT2G41540.1 84.000 450 72 0 7 456 12 461 0.0 770
Msa0597700 AT2G41540.4 84.000 450 72 0 7 456 12 461 0.0 770
Msa0597700 AT2G41540.2 84.000 450 72 0 7 456 12 461 0.0 770
Msa0597700 AT3G07690.2 82.955 440 75 0 19 458 17 456 0.0 769
Msa0597700 AT3G07690.1 81.111 450 75 1 19 458 17 466 0.0 760
Msa0597700 AT5G40610.1 26.988 415 217 20 30 426 48 394 7.39e-15 76.6

Find 144 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCTTAGTTTGAATTAA+TGG 0.183254 4_2:-30229988 Msa0597700:five_prime_UTR
CTTTCTTAGTTTGAATTAAT+GGG 0.208970 4_2:-30229987 Msa0597700:five_prime_UTR
ATACTTACCTGTGTAGTTAT+TGG 0.214299 4_2:-30226620 Msa0597700:three_prime_UTR
AATGTTGAACTCTGTTATTC+AGG 0.229162 4_2:-30226683 Msa0597700:three_prime_UTR
CAACTTTGTTGGAGGAATTC+TGG 0.230677 4_2:+30226718 None:intergenic
AGTTCCTGTCATTATTTCTT+TGG 0.246368 4_2:-30229292 Msa0597700:CDS
CATCATCAACTTTCCCCATT+AGG 0.251148 4_2:+30229757 None:intergenic
GGTTCTCTTCAAAGTGTAAA+TGG 0.275107 4_2:-30229813 Msa0597700:CDS
TGTGTAGTTATTGGTATAAC+TGG 0.277108 4_2:-30226611 Msa0597700:three_prime_UTR
ATCATCAACTTTCCCCATTA+GGG 0.290579 4_2:+30229758 None:intergenic
TATATAAAATACTAATATTA+AGG 0.295699 4_2:-30227713 Msa0597700:intron
AACATGCATTGAAGAGAAAA+AGG 0.295780 4_2:+30230033 None:intergenic
TTGTGTTGGAGGTGGTGCTT+GGG 0.318205 4_2:-30229718 Msa0597700:CDS
TGAAAGCAAGATTAATTTGT+TGG 0.327775 4_2:-30229886 Msa0597700:five_prime_UTR
TTTGTGTTGGAGGTGGTGCT+TGG 0.332168 4_2:-30229719 Msa0597700:CDS
ATTGAAAATATTCTCTATCT+TGG 0.332464 4_2:-30228946 Msa0597700:CDS
TAGCTTTCTGTTATCGAATT+CGG 0.338462 4_2:-30226565 Msa0597700:three_prime_UTR
GCTCTATCAACCGCTCTTCC+TGG 0.341553 4_2:+30229618 None:intergenic
TGATGCTGTCACCCATTTCA+AGG 0.343219 4_2:+30227967 None:intergenic
TCGAGGGGAGATTAGGTGAT+AGG 0.347018 4_2:-30229509 Msa0597700:CDS
TGTCATTATTTCTTTGGCTA+AGG 0.357253 4_2:-30229286 Msa0597700:CDS
CAAGGGCAAGGGGATGATTC+AGG 0.359334 4_2:-30227946 Msa0597700:intron
TTCAAGGCTCAATTCTCCTT+TGG 0.370084 4_2:+30227983 None:intergenic
AGAGGGCCTGCAAGTTTCTC+TGG 0.371971 4_2:+30228068 None:intergenic
TTGGTTGTGTCTATTGGTAC+TGG 0.373803 4_2:-30226748 Msa0597700:three_prime_UTR
CACAAGAGACAAGGATTCTA+AGG 0.375371 4_2:+30226981 None:intergenic
ATTTGTTGGTGTGGTGTCAT+TGG 0.380459 4_2:-30229872 Msa0597700:five_prime_UTR
TAAGGGTGTGGAGGCTGAAT+TGG 0.382414 4_2:-30229268 Msa0597700:CDS
GAAGAACCAGAGAAACTTGC+AGG 0.385116 4_2:-30228074 Msa0597700:CDS
TTAGAATCCTTGTCTCTTGT+GGG 0.389939 4_2:-30226979 Msa0597700:exon
TACACCTGTTTGCCCTTTGA+AGG 0.390970 4_2:-30229433 Msa0597700:CDS
AGGAGAATTGAGCCTTGAAA+TGG 0.391296 4_2:-30227979 Msa0597700:CDS
GAAGGTTGTGACGAATTTGC+AGG 0.392149 4_2:-30229415 Msa0597700:CDS
ATGTGTTGAGGAGGTTGATT+AGG 0.393435 4_2:-30229554 Msa0597700:CDS
CTTAGAATCCTTGTCTCTTG+TGG 0.394065 4_2:-30226980 Msa0597700:exon
TCTTGTTACTCATGAAGTTA+TGG 0.394359 4_2:-30228791 Msa0597700:CDS
TTGAAGAAATTAGTAAGTAT+TGG 0.395541 4_2:-30229329 Msa0597700:CDS
GTTGGTGTGGTGTCATTGGT+TGG 0.396981 4_2:-30229868 Msa0597700:five_prime_UTR
GTCATTATTTCTTTGGCTAA+GGG 0.400519 4_2:-30229285 Msa0597700:CDS
GATGAGCTTAGAACCCTAAT+GGG 0.411719 4_2:-30229771 Msa0597700:CDS
TATTTCTTTGGCTAAGGGTG+TGG 0.412534 4_2:-30229280 Msa0597700:CDS
TGATGAGCTTAGAACCCTAA+TGG 0.413049 4_2:-30229772 Msa0597700:CDS
TTAAAGAATGTATATGCAAT+TGG 0.421984 4_2:-30228763 Msa0597700:CDS
CTTGTTACTCATGAAGTTAT+GGG 0.422177 4_2:-30228790 Msa0597700:CDS
CAGAAAGCTAACTCACAAAC+TGG 0.423010 4_2:+30226578 None:intergenic
CGAATTTGCAGGAAGCTGTA+TGG 0.426348 4_2:-30229404 Msa0597700:CDS
AAATATGTCGAGGGGAGATT+AGG 0.426665 4_2:-30229516 Msa0597700:CDS
TAAATCTCGGAGGCAATGTT+AGG 0.432930 4_2:+30228919 None:intergenic
GGTGTTATGATCCGCGGCTC+AGG 0.435974 4_2:+30229243 None:intergenic
AAGATGGGACAAAGCTCGAC+AGG 0.442551 4_2:+30227744 None:intergenic
ATATTCTTTGTTGTAAATCT+CGG 0.448562 4_2:+30228906 None:intergenic
TTGGTGTGGTGTCATTGGTT+GGG 0.450973 4_2:-30229867 Msa0597700:five_prime_UTR
AAATACCAAGACAACTTTGT+TGG 0.451938 4_2:+30226707 None:intergenic
GAAACTTGCAGGCCCTCTCT+TGG 0.454109 4_2:-30228063 Msa0597700:CDS
GCTTGAAGTATAGCCTGTAC+TGG 0.457035 4_2:+30227095 None:intergenic
TTTATATAACATCTTCAAGA+TGG 0.462752 4_2:+30227728 None:intergenic
TTCTTTGGCTAAGGGTGTGG+AGG 0.466579 4_2:-30229277 Msa0597700:CDS
TTCCTCCAACAAAGTTGTCT+TGG 0.474927 4_2:-30226712 Msa0597700:three_prime_UTR
ACAACCTTCAAAGGGCAAAC+AGG 0.479400 4_2:+30229429 None:intergenic
GAAAATATTCTCTATCTTGG+AGG 0.480816 4_2:-30228943 Msa0597700:CDS
GCTATGTTACAAGAGGCTTA+TGG 0.483493 4_2:-30229681 Msa0597700:CDS
GGGTGACAGCATCAAGGGCA+AGG 0.485731 4_2:-30227958 Msa0597700:CDS
TAATTCAAACTAAGAAAGAA+AGG 0.485861 4_2:+30229992 None:intergenic
AGCAAAGTAGACTGATTTGC+TGG 0.487927 4_2:+30228139 None:intergenic
GGCTCTGAGCAATCTTAATA+CGG 0.496152 4_2:+30227039 None:intergenic
TTAGTTATAGTTGAGTGAGT+AGG 0.496926 4_2:-30226536 Msa0597700:three_prime_UTR
ACGGTCTCGAGGATCATTCA+TGG 0.497246 4_2:+30227058 None:intergenic
TTGAGAATAGTTTGTGTTGG+AGG 0.502821 4_2:-30229729 Msa0597700:CDS
TTATATAACATCTTCAAGAT+GGG 0.503001 4_2:+30227729 None:intergenic
AACCATCATGGATACTCAAA+TGG 0.503751 4_2:-30229834 Msa0597700:CDS
AAATTCGTCACAACCTTCAA+AGG 0.506986 4_2:+30229420 None:intergenic
TAATTTCTTCAAACACCTCA+CGG 0.507384 4_2:+30229340 None:intergenic
AATGTATATGCAATTGGAGC+AGG 0.513242 4_2:-30228757 Msa0597700:intron
GTTTGAAGTGATTAATTCGA+GGG 0.516179 4_2:-30229580 Msa0597700:CDS
CCAACACAAACTATTCTCAA+TGG 0.516452 4_2:+30229732 None:intergenic
AAAGGTCGTAATGCATGGTA+TGG 0.519099 4_2:-30228017 Msa0597700:CDS
GGAGAATTGAGCCTTGAAAT+GGG 0.522487 4_2:-30227978 Msa0597700:CDS
TATGCAAATGCTCGAATATG+TGG 0.524238 4_2:-30228886 Msa0597700:CDS
CTTCAGGGAATCTCCAGTAC+AGG 0.526916 4_2:-30227108 Msa0597700:intron
TACCAAGACAACTTTGTTGG+AGG 0.526917 4_2:+30226710 None:intergenic
TTTCTTAGTTTGAATTAATG+GGG 0.527620 4_2:-30229986 Msa0597700:five_prime_UTR
AGGATCTAAGACATTTAAGC+TGG 0.528053 4_2:+30227788 None:intergenic
ACCTCACGGGTTTCTGTCGA+TGG 0.528482 4_2:+30229354 None:intergenic
TGCATGGTATGGACAAAAGT+TGG 0.531855 4_2:-30228006 Msa0597700:CDS
GGTGACAGCATCAAGGGCAA+GGG 0.540284 4_2:-30227957 Msa0597700:CDS
AGTATGGGTGGGTGTGTTGT+CGG 0.541935 4_2:+30230192 None:intergenic
GAAAGAAAGGGAAATGAAGA+AGG 0.544087 4_2:+30230005 None:intergenic
GCAAGATTAATTTGTTGGTG+TGG 0.545396 4_2:-30229881 Msa0597700:five_prime_UTR
AATTTCTTCAAACACCTCAC+GGG 0.548801 4_2:+30229341 None:intergenic
CGAGGGGAGATTAGGTGATA+GGG 0.549275 4_2:-30229508 Msa0597700:CDS
CCATTGAGAATAGTTTGTGT+TGG 0.551150 4_2:-30229732 Msa0597700:CDS
AACAGAAGAAACAGTATGGG+TGG 0.552754 4_2:+30230180 None:intergenic
GGCTGCTGACCAAGAAGAGA+TGG 0.553433 4_2:+30227002 None:intergenic
AGAATAGTTTGTGTTGGAGG+TGG 0.557952 4_2:-30229726 Msa0597700:CDS
TGAAATGGGTGACAGCATCA+AGG 0.560053 4_2:-30227964 Msa0597700:CDS
AATTCAAACTAAGAAAGAAA+GGG 0.564240 4_2:+30229993 None:intergenic
TGTGTTGGAGGTGGTGCTTG+GGG 0.568789 4_2:-30229717 Msa0597700:CDS
ACTTATGTAACCTTGTTGAA+AGG 0.569017 4_2:-30228035 Msa0597700:CDS
AATTCGTCACAACCTTCAAA+GGG 0.569811 4_2:+30229421 None:intergenic
GAAATGGGTGACAGCATCAA+GGG 0.570576 4_2:-30227963 Msa0597700:CDS
TGAAGTGATTAATTCGAGGG+AGG 0.572910 4_2:-30229577 Msa0597700:CDS
TGTTTGAAGTGATTAATTCG+AGG 0.574810 4_2:-30229581 Msa0597700:CDS
GAATTTGCAGGAAGCTGTAT+GGG 0.578928 4_2:-30229403 Msa0597700:CDS
GGCAGGCGCACTTTATAGTG+TGG 0.581523 4_2:-30228825 Msa0597700:CDS
GTGACAGCATCAAGGGCAAG+GGG 0.585669 4_2:-30227956 Msa0597700:CDS
AACCATTTGAGTATCCATGA+TGG 0.585718 4_2:+30229832 None:intergenic
GTTTACAGCTATGTTACAAG+AGG 0.586719 4_2:-30229688 Msa0597700:CDS
GGATCAAAGATGAACCATCA+TGG 0.587501 4_2:-30229846 Msa0597700:exon
CGAGGGAGGATGTGTTGAGG+AGG 0.589261 4_2:-30229563 Msa0597700:CDS
TGTTGAAAGGTCGTAATGCA+TGG 0.592104 4_2:-30228022 Msa0597700:CDS
ATTCAGGCAAACTTCAGAGA+AGG 0.595304 4_2:-30226667 Msa0597700:three_prime_UTR
GTTACTCATGAAGTTATGGG+TGG 0.597858 4_2:-30228787 Msa0597700:CDS
TTCAAACAAATGCGTAGCCG+TGG 0.598990 4_2:+30229596 None:intergenic
TTAGCCAAAGAAATAATGAC+AGG 0.600030 4_2:+30229288 None:intergenic
ATTAGGATATGGAGAAGACC+AGG 0.601604 4_2:-30229636 Msa0597700:CDS
TGCGTATTTGAAATATGTCG+AGG 0.602106 4_2:-30229526 Msa0597700:CDS
TTACAAATCTAAAACAACAA+TGG 0.609126 4_2:+30230064 None:intergenic
GCAGGCGCACTTTATAGTGT+GGG 0.609902 4_2:-30228824 Msa0597700:CDS
CTGAATTGGTTCCTGAGCCG+CGG 0.610242 4_2:-30229254 Msa0597700:CDS
GCGTATTTGAAATATGTCGA+GGG 0.611600 4_2:-30229525 Msa0597700:CDS
AGATGGGACAAAGCTCGACA+GGG 0.616695 4_2:+30227745 None:intergenic
TTCTTTGTTGTAAATCTCGG+AGG 0.618426 4_2:+30228909 None:intergenic
CATAAGTATCAGCCAAGAGA+GGG 0.625499 4_2:+30228051 None:intergenic
TGCATAACCCACAAGAGACA+AGG 0.629348 4_2:+30226972 None:intergenic
ACATAAGTATCAGCCAAGAG+AGG 0.630335 4_2:+30228050 None:intergenic
TGCATTACGACCTTTCAACA+AGG 0.634314 4_2:+30228025 None:intergenic
GCTGACCAAGAAGAGATGGC+CGG 0.634478 4_2:+30227006 None:intergenic
ATTCGAGGGAGGATGTGTTG+AGG 0.636238 4_2:-30229566 Msa0597700:CDS
AGCGTAGGTGTTATGATCCG+CGG 0.638818 4_2:+30229237 None:intergenic
TCTAAAACAACAATGGAGAG+AGG 0.642235 4_2:+30230071 None:intergenic
ACAGAAGAAACAGTATGGGT+GGG 0.643902 4_2:+30230181 None:intergenic
AGTTATACCAATAACTACAC+AGG 0.650678 4_2:+30226613 None:intergenic
TATGGACAAAAGTTGGCCAA+AGG 0.655927 4_2:-30227999 Msa0597700:CDS
ATGGAGAAGACCAGGAAGAG+CGG 0.661540 4_2:-30229628 Msa0597700:CDS
GCTCGACTGATCATTAGCGT+AGG 0.663687 4_2:+30229222 None:intergenic
CGTATTTGAAATATGTCGAG+GGG 0.666107 4_2:-30229524 Msa0597700:CDS
GAGATGGCCGGTAAAACACA+TGG 0.670898 4_2:+30227018 None:intergenic
ATGAGCTTAGAACCCTAATG+GGG 0.672787 4_2:-30229770 Msa0597700:CDS
GCAATCTTAATACGGTCTCG+AGG 0.679304 4_2:+30227047 None:intergenic
AAGAGCGGTTGATAGAGCCA+CGG 0.687252 4_2:-30229613 Msa0597700:CDS
GATGGGACAAAGCTCGACAG+GGG 0.689704 4_2:+30227746 None:intergenic
AAAGTAGACTGATTTGCTGG+TGG 0.693461 4_2:+30228142 None:intergenic
GATGCTGACATTGTGATCAA+CGG 0.725021 4_2:-30229381 Msa0597700:CDS
GCCATCGACAGAAACCCGTG+AGG 0.775448 4_2:-30229355 Msa0597700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTTTAAAATTTCATTTT+GGG - chr4_2:30228315-30228334 Msa0597700:intron 10.0%
!!! ATAATATTTTGAATTTTAGT+TGG - chr4_2:30229928-30229947 Msa0597700:five_prime_UTR 10.0%
!!! TAGTTAAAATTTCATGTTTT+TGG - chr4_2:30226743-30226762 Msa0597700:three_prime_UTR 15.0%
!! TTGAAAAACAATAAATTTCA+TGG + chr4_2:30227571-30227590 None:intergenic 15.0%
!!! CATTGTTTAAAATTTCATTT+TGG - chr4_2:30228314-30228333 Msa0597700:intron 15.0%
!!! TTACAAATCTAAAACAACAA+TGG + chr4_2:30226634-30226653 None:intergenic 20.0%
!! AATTCAAACTAAGAAAGAAA+GGG + chr4_2:30226705-30226724 None:intergenic 20.0%
!! TAATTCAAACTAAGAAAGAA+AGG + chr4_2:30226706-30226725 None:intergenic 20.0%
!!! TCTTTCTTAGTTTGAATTAA+TGG - chr4_2:30226707-30226726 Msa0597700:three_prime_UTR 20.0%
!!! CTTTCTTAGTTTGAATTAAT+GGG - chr4_2:30226708-30226727 Msa0597700:three_prime_UTR 20.0%
!!! TTTCTTAGTTTGAATTAATG+GGG - chr4_2:30226709-30226728 Msa0597700:three_prime_UTR 20.0%
!! TTGAAGAAATTAGTAAGTAT+TGG - chr4_2:30227366-30227385 Msa0597700:intron 20.0%
!! AGAAACTAAAATCAAATCAA+GGG + chr4_2:30227684-30227703 None:intergenic 20.0%
!!! AGATAGAGAATATTTTCAAT+GGG + chr4_2:30227749-30227768 None:intergenic 20.0%
!!! AAGATAGAGAATATTTTCAA+TGG + chr4_2:30227750-30227769 None:intergenic 20.0%
!! ATTGAAAATATTCTCTATCT+TGG - chr4_2:30227749-30227768 Msa0597700:CDS 20.0%
!!! ATATTCTTTGTTGTAAATCT+CGG + chr4_2:30227792-30227811 None:intergenic 20.0%
!! TTAAAGAATGTATATGCAAT+TGG - chr4_2:30227932-30227951 Msa0597700:intron 20.0%
!! TATAAACAACAATTGAATGT+AGG + chr4_2:30228141-30228160 None:intergenic 20.0%
!! TTATATAACATCTTCAAGAT+GGG + chr4_2:30228969-30228988 None:intergenic 20.0%
!! TTTATATAACATCTTCAAGA+TGG + chr4_2:30228970-30228989 None:intergenic 20.0%
!! AGTTCAATAATATTTCCAAT+TGG + chr4_2:30229390-30229409 None:intergenic 20.0%
!!! TATGTAACTAACTTTTTCTT+TGG - chr4_2:30229542-30229561 Msa0597700:CDS 20.0%
! AAAAACAGAAGAAACAGTAT+GGG + chr4_2:30226521-30226540 None:intergenic 25.0%
! AAAAAACAGAAGAAACAGTA+TGG + chr4_2:30226522-30226541 None:intergenic 25.0%
!!! TGAAAGCAAGATTAATTTGT+TGG - chr4_2:30226809-30226828 Msa0597700:three_prime_UTR 25.0%
!! TCATTAGTTTCTTTATGTTG+TGG - chr4_2:30227521-30227540 Msa0597700:intron 25.0%
! AAACAATAAATTTCATGGTG+TGG + chr4_2:30227566-30227585 None:intergenic 25.0%
! CAGAAACTAAAATCAAATCA+AGG + chr4_2:30227685-30227704 None:intergenic 25.0%
!!! CTTGATTTGATTTTAGTTTC+TGG - chr4_2:30227683-30227702 Msa0597700:intron 25.0%
!! GATAGAGAATATTTTCAATG+GGG + chr4_2:30227748-30227767 None:intergenic 25.0%
! GCAATTATATCAAATAAGAC+AGG + chr4_2:30228093-30228112 None:intergenic 25.0%
! CAGTTGAAATTTCATTTAAG+AGG - chr4_2:30228112-30228131 Msa0597700:CDS 25.0%
!!! TTGTTTTGCCAGATATTATT+TGG - chr4_2:30228216-30228235 Msa0597700:intron 25.0%
!! TGTTTTGCCAGATATTATTT+GGG - chr4_2:30228217-30228236 Msa0597700:intron 25.0%
!! TTTATGATGATCGATTTAAC+AGG - chr4_2:30228501-30228520 Msa0597700:intron 25.0%
!! TTATGATGATCGATTTAACA+GGG - chr4_2:30228502-30228521 Msa0597700:intron 25.0%
!! GATTTTTATCACTCATCTAT+TGG - chr4_2:30228596-30228615 Msa0597700:intron 25.0%
!! ATTTCATTCAAGTTTCTACT+TGG - chr4_2:30228801-30228820 Msa0597700:CDS 25.0%
! AAAATTCATAAAAGGATTGC+TGG + chr4_2:30229113-30229132 None:intergenic 25.0%
! GTTGGAACAAAATTCATAAA+AGG + chr4_2:30229121-30229140 None:intergenic 25.0%
!!! TAAAAGGTGCATTTTAACTA+AGG + chr4_2:30229212-30229231 None:intergenic 25.0%
! AACTCAATTGTTTATTCTTC+AGG - chr4_2:30229406-30229425 Msa0597700:CDS 25.0%
! TTACTAATAGAGATCTTATG+TGG - chr4_2:30229485-30229504 Msa0597700:CDS 25.0%
! GAAAAAGTTAGTTACATAAC+TGG + chr4_2:30229540-30229559 None:intergenic 25.0%
!!! TTTTCTTTGGTTTTGATTTG+TGG - chr4_2:30229555-30229574 Msa0597700:CDS 25.0%
!! CTTAAATGACCATAAACTTT+TGG + chr4_2:30229810-30229829 None:intergenic 25.0%
!! ATATATCTCGAACTTTTGAT+TGG + chr4_2:30229872-30229891 None:intergenic 25.0%
AACATGCATTGAAGAGAAAA+AGG + chr4_2:30226665-30226684 None:intergenic 30.0%
!!! TTCATGTTTTTGGAAGATTG+TGG - chr4_2:30226753-30226772 Msa0597700:three_prime_UTR 30.0%
!! TTTTGGAAGATTGTGGTTTT+TGG - chr4_2:30226760-30226779 Msa0597700:three_prime_UTR 30.0%
! TTTGGAAGATTGTGGTTTTT+GGG - chr4_2:30226761-30226780 Msa0597700:three_prime_UTR 30.0%
!!! TTATGGTAGTTTTAGAGACA+AGG - chr4_2:30227031-30227050 Msa0597700:CDS 30.0%
!!! TTAGAGACAAGGTTTTGATT+AGG - chr4_2:30227042-30227061 Msa0597700:CDS 30.0%
!!! ACAAGGTTTTGATTAGGATA+TGG - chr4_2:30227048-30227067 Msa0597700:CDS 30.0%
! TGTTTGAAGTGATTAATTCG+AGG - chr4_2:30227114-30227133 Msa0597700:intron 30.0%
! GTTTGAAGTGATTAATTCGA+GGG - chr4_2:30227115-30227134 Msa0597700:intron 30.0%
!! CAGATGAGATTTTGAAAGAT+GGG - chr4_2:30227219-30227238 Msa0597700:intron 30.0%
!!! AGATGGGTTTTGTTTGAATA+TGG - chr4_2:30227235-30227254 Msa0597700:intron 30.0%
TAATTTCTTCAAACACCTCA+CGG + chr4_2:30227358-30227377 None:intergenic 30.0%
! AGTTCCTGTCATTATTTCTT+TGG - chr4_2:30227403-30227422 Msa0597700:intron 30.0%
TTAGCCAAAGAAATAATGAC+AGG + chr4_2:30227410-30227429 None:intergenic 30.0%
! TGTCATTATTTCTTTGGCTA+AGG - chr4_2:30227409-30227428 Msa0597700:intron 30.0%
! GTCATTATTTCTTTGGCTAA+GGG - chr4_2:30227410-30227429 Msa0597700:intron 30.0%
GAAAATATTCTCTATCTTGG+AGG - chr4_2:30227752-30227771 Msa0597700:CDS 30.0%
TCTTGTTACTCATGAAGTTA+TGG - chr4_2:30227904-30227923 Msa0597700:intron 30.0%
CTTGTTACTCATGAAGTTAT+GGG - chr4_2:30227905-30227924 Msa0597700:intron 30.0%
CACACATAAATAACATCAAG+AGG + chr4_2:30228400-30228419 None:intergenic 30.0%
ACTTATGTAACCTTGTTGAA+AGG - chr4_2:30228660-30228679 Msa0597700:intron 30.0%
TTTAACTAAGGACAAAACTG+TGG + chr4_2:30229200-30229219 None:intergenic 30.0%
!! CAAATCTGGCTTTAGTTAAA+AGG + chr4_2:30229228-30229247 None:intergenic 30.0%
! CTTTGGGTTCAGATAAATTT+AGG - chr4_2:30229304-30229323 Msa0597700:CDS 30.0%
TGTAATCATGTTACATATGC+AGG - chr4_2:30229458-30229477 Msa0597700:CDS 30.0%
GTAATCATGTTACATATGCA+GGG - chr4_2:30229459-30229478 Msa0597700:CDS 30.0%
!!! GGATTTAGTTTTGATTTTGC+AGG + chr4_2:30229519-30229538 None:intergenic 30.0%
!! TTTTAGTTGGTTGTGTCTAT+TGG - chr4_2:30229941-30229960 Msa0597700:five_prime_UTR 30.0%
AAATACCAAGACAACTTTGT+TGG + chr4_2:30229991-30230010 None:intergenic 30.0%
AATGTTGAACTCTGTTATTC+AGG - chr4_2:30230012-30230031 Msa0597700:five_prime_UTR 30.0%
ATACTTACCTGTGTAGTTAT+TGG - chr4_2:30230075-30230094 Msa0597700:five_prime_UTR 30.0%
AGTTATACCAATAACTACAC+AGG + chr4_2:30230085-30230104 None:intergenic 30.0%
TGTGTAGTTATTGGTATAAC+TGG - chr4_2:30230084-30230103 Msa0597700:five_prime_UTR 30.0%
TAGCTTTCTGTTATCGAATT+CGG - chr4_2:30230130-30230149 Msa0597700:five_prime_UTR 30.0%
TTAGTTATAGTTGAGTGAGT+AGG - chr4_2:30230159-30230178 Msa0597700:five_prime_UTR 30.0%
AAGCGTGTCAAAAACAACTT+TGG + chr4_2:30226574-30226593 None:intergenic 35.0%
! TCTAAAACAACAATGGAGAG+AGG + chr4_2:30226627-30226646 None:intergenic 35.0%
GAAAGAAAGGGAAATGAAGA+AGG + chr4_2:30226693-30226712 None:intergenic 35.0%
!! GCAAGATTAATTTGTTGGTG+TGG - chr4_2:30226814-30226833 Msa0597700:three_prime_UTR 35.0%
AACCATCATGGATACTCAAA+TGG - chr4_2:30226861-30226880 Msa0597700:three_prime_UTR 35.0%
AACCATTTGAGTATCCATGA+TGG + chr4_2:30226866-30226885 None:intergenic 35.0%
GGTTCTCTTCAAAGTGTAAA+TGG - chr4_2:30226882-30226901 Msa0597700:intron 35.0%
ATCATCAACTTTCCCCATTA+GGG + chr4_2:30226940-30226959 None:intergenic 35.0%
CCAACACAAACTATTCTCAA+TGG + chr4_2:30226966-30226985 None:intergenic 35.0%
! CCATTGAGAATAGTTTGTGT+TGG - chr4_2:30226963-30226982 Msa0597700:three_prime_UTR 35.0%
! TTGAGAATAGTTTGTGTTGG+AGG - chr4_2:30226966-30226985 Msa0597700:three_prime_UTR 35.0%
GTTTACAGCTATGTTACAAG+AGG - chr4_2:30227007-30227026 Msa0597700:CDS 35.0%
! TGCGTATTTGAAATATGTCG+AGG - chr4_2:30227169-30227188 Msa0597700:intron 35.0%
! GCGTATTTGAAATATGTCGA+GGG - chr4_2:30227170-30227189 Msa0597700:intron 35.0%
! CGTATTTGAAATATGTCGAG+GGG - chr4_2:30227171-30227190 Msa0597700:intron 35.0%
!! GCAGATGAGATTTTGAAAGA+TGG - chr4_2:30227218-30227237 Msa0597700:intron 35.0%
AATTCGTCACAACCTTCAAA+GGG + chr4_2:30227277-30227296 None:intergenic 35.0%
AAATTCGTCACAACCTTCAA+AGG + chr4_2:30227278-30227297 None:intergenic 35.0%
AATTTCTTCAAACACCTCAC+GGG + chr4_2:30227357-30227376 None:intergenic 35.0%
TTGATATTATGCTTTGCAGC+TGG - chr4_2:30227719-30227738 Msa0597700:CDS 35.0%
! TTCTTTGTTGTAAATCTCGG+AGG + chr4_2:30227789-30227808 None:intergenic 35.0%
TATGCAAATGCTCGAATATG+TGG - chr4_2:30227809-30227828 Msa0597700:CDS 35.0%
GAATATGTGGAGCAGAAAAA+TGG - chr4_2:30227822-30227841 Msa0597700:CDS 35.0%
AGAAAAATGGAGGAAACCAT+TGG - chr4_2:30227835-30227854 Msa0597700:intron 35.0%
! AACCATTGGCAAAGTTTTTG+AGG - chr4_2:30227849-30227868 Msa0597700:intron 35.0%
AATGTATATGCAATTGGAGC+AGG - chr4_2:30227938-30227957 Msa0597700:intron 35.0%
TTTGCCAGATATTATTTGGG+AGG - chr4_2:30228220-30228239 Msa0597700:intron 35.0%
TTGCCAGATATTATTTGGGA+GGG - chr4_2:30228221-30228240 Msa0597700:intron 35.0%
!! AAGTGTCGTTCTTTTAAGCT+AGG + chr4_2:30228290-30228309 None:intergenic 35.0%
! TATTTTGCCTTCCATCTTGT+AGG - chr4_2:30228842-30228861 Msa0597700:CDS 35.0%
! ATTTTGCCTTCCATCTTGTA+GGG - chr4_2:30228843-30228862 Msa0597700:CDS 35.0%
! AGGATCTAAGACATTTAAGC+TGG + chr4_2:30228910-30228929 None:intergenic 35.0%
! CTGTTTTCTCATTCAAAGAG+AGG + chr4_2:30229047-30229066 None:intergenic 35.0%
TTCATAAAAGGATTGCTGGA+GGG + chr4_2:30229109-30229128 None:intergenic 35.0%
ATTCATAAAAGGATTGCTGG+AGG + chr4_2:30229110-30229129 None:intergenic 35.0%
TCTATGATATCGTACGCTTT+AGG - chr4_2:30229163-30229182 Msa0597700:intron 35.0%
TAACTAAAGCCAGATTTGTG+TGG - chr4_2:30229230-30229249 Msa0597700:CDS 35.0%
AACTAAAGCCAGATTTGTGT+GGG - chr4_2:30229231-30229250 Msa0597700:CDS 35.0%
!! TCGAAGGTATTATCTGCTTT+GGG + chr4_2:30229268-30229287 None:intergenic 35.0%
!! TTCGAAGGTATTATCTGCTT+TGG + chr4_2:30229269-30229288 None:intergenic 35.0%
ATAATATTTCCAATTGGCGC+AGG + chr4_2:30229384-30229403 None:intergenic 35.0%
TTAGAATCCTTGTCTCTTGT+GGG - chr4_2:30229716-30229735 Msa0597700:CDS 35.0%
! ATGACCATAAACTTTTGGTG+AGG + chr4_2:30229805-30229824 None:intergenic 35.0%
ACAGAAGAAACAGTATGGGT+GGG + chr4_2:30226517-30226536 None:intergenic 40.0%
AACAGAAGAAACAGTATGGG+TGG + chr4_2:30226518-30226537 None:intergenic 40.0%
!! ATTTGTTGGTGTGGTGTCAT+TGG - chr4_2:30226823-30226842 Msa0597700:three_prime_UTR 40.0%
GGATCAAAGATGAACCATCA+TGG - chr4_2:30226849-30226868 Msa0597700:three_prime_UTR 40.0%
TGATGAGCTTAGAACCCTAA+TGG - chr4_2:30226923-30226942 Msa0597700:intron 40.0%
GATGAGCTTAGAACCCTAAT+GGG - chr4_2:30226924-30226943 Msa0597700:intron 40.0%
ATGAGCTTAGAACCCTAATG+GGG - chr4_2:30226925-30226944 Msa0597700:intron 40.0%
CATCATCAACTTTCCCCATT+AGG + chr4_2:30226941-30226960 None:intergenic 40.0%
! AGAATAGTTTGTGTTGGAGG+TGG - chr4_2:30226969-30226988 Msa0597700:three_prime_UTR 40.0%
GCTATGTTACAAGAGGCTTA+TGG - chr4_2:30227014-30227033 Msa0597700:CDS 40.0%
ATTAGGATATGGAGAAGACC+AGG - chr4_2:30227059-30227078 Msa0597700:CDS 40.0%
TGAAGTGATTAATTCGAGGG+AGG - chr4_2:30227118-30227137 Msa0597700:intron 40.0%
! ATGTGTTGAGGAGGTTGATT+AGG - chr4_2:30227141-30227160 Msa0597700:intron 40.0%
AAATATGTCGAGGGGAGATT+AGG - chr4_2:30227179-30227198 Msa0597700:intron 40.0%
GAATTTGCAGGAAGCTGTAT+GGG - chr4_2:30227292-30227311 Msa0597700:intron 40.0%
GATGCTGACATTGTGATCAA+CGG - chr4_2:30227314-30227333 Msa0597700:intron 40.0%
TATTTCTTTGGCTAAGGGTG+TGG - chr4_2:30227415-30227434 Msa0597700:intron 40.0%
ACATGCATTCAAATGCTCGA+GGG + chr4_2:30227604-30227623 None:intergenic 40.0%
AACATGCATTCAAATGCTCG+AGG + chr4_2:30227605-30227624 None:intergenic 40.0%
TAAATCTCGGAGGCAATGTT+AGG + chr4_2:30227779-30227798 None:intergenic 40.0%
TATGTGGAGCAGAAAAATGG+AGG - chr4_2:30227825-30227844 Msa0597700:CDS 40.0%
TGCCTCAAAAACTTTGCCAA+TGG + chr4_2:30227854-30227873 None:intergenic 40.0%
!!! ATTGGCAAAGTTTTTGAGGC+AGG - chr4_2:30227853-30227872 Msa0597700:intron 40.0%
GTTACTCATGAAGTTATGGG+TGG - chr4_2:30227908-30227927 Msa0597700:intron 40.0%
TAGCCCTCCCAAATAATATC+TGG + chr4_2:30228227-30228246 None:intergenic 40.0%
! GATGATCGATTTAACAGGGA+TGG - chr4_2:30228506-30228525 Msa0597700:intron 40.0%
!! AAAGTAGACTGATTTGCTGG+TGG + chr4_2:30228556-30228575 None:intergenic 40.0%
!! AGCAAAGTAGACTGATTTGC+TGG + chr4_2:30228559-30228578 None:intergenic 40.0%
CATAAGTATCAGCCAAGAGA+GGG + chr4_2:30228647-30228666 None:intergenic 40.0%
ACATAAGTATCAGCCAAGAG+AGG + chr4_2:30228648-30228667 None:intergenic 40.0%
TGCATTACGACCTTTCAACA+AGG + chr4_2:30228673-30228692 None:intergenic 40.0%
TGTTGAAAGGTCGTAATGCA+TGG - chr4_2:30228673-30228692 Msa0597700:intron 40.0%
AAAGGTCGTAATGCATGGTA+TGG - chr4_2:30228678-30228697 Msa0597700:intron 40.0%
TGCATGGTATGGACAAAAGT+TGG - chr4_2:30228689-30228708 Msa0597700:intron 40.0%
TATGGACAAAAGTTGGCCAA+AGG - chr4_2:30228696-30228715 Msa0597700:intron 40.0%
TTCAAGGCTCAATTCTCCTT+TGG + chr4_2:30228715-30228734 None:intergenic 40.0%
AGGAGAATTGAGCCTTGAAA+TGG - chr4_2:30228716-30228735 Msa0597700:intron 40.0%
GGAGAATTGAGCCTTGAAAT+GGG - chr4_2:30228717-30228736 Msa0597700:intron 40.0%
!! GCAACATGCTTGTTTTCATC+AGG + chr4_2:30228930-30228949 None:intergenic 40.0%
! AAAAACCGTTCAGTGGACTT+TGG - chr4_2:30229287-30229306 Msa0597700:CDS 40.0%
! AAAACCGTTCAGTGGACTTT+GGG - chr4_2:30229288-30229307 Msa0597700:CDS 40.0%
TTTGTGGACCTCTTATCTTC+AGG - chr4_2:30229571-30229590 Msa0597700:CDS 40.0%
TTGTGGACCTCTTATCTTCA+GGG - chr4_2:30229572-30229591 Msa0597700:CDS 40.0%
!! GGCTCTGAGCAATCTTAATA+CGG + chr4_2:30229659-30229678 None:intergenic 40.0%
CACAAGAGACAAGGATTCTA+AGG + chr4_2:30229717-30229736 None:intergenic 40.0%
CTTAGAATCCTTGTCTCTTG+TGG - chr4_2:30229715-30229734 Msa0597700:CDS 40.0%
! CCATAAACTTTTGGTGAGGT+GGG + chr4_2:30229801-30229820 None:intergenic 40.0%
! ACCATAAACTTTTGGTGAGG+TGG + chr4_2:30229802-30229821 None:intergenic 40.0%
TTGGTTGTGTCTATTGGTAC+TGG - chr4_2:30229947-30229966 Msa0597700:five_prime_UTR 40.0%
CAACTTTGTTGGAGGAATTC+TGG + chr4_2:30229980-30229999 None:intergenic 40.0%
TTCCTCCAACAAAGTTGTCT+TGG - chr4_2:30229983-30230002 Msa0597700:five_prime_UTR 40.0%
TACCAAGACAACTTTGTTGG+AGG + chr4_2:30229988-30230007 None:intergenic 40.0%
ATTCAGGCAAACTTCAGAGA+AGG - chr4_2:30230028-30230047 Msa0597700:five_prime_UTR 40.0%
CAGAAAGCTAACTCACAAAC+TGG + chr4_2:30230120-30230139 None:intergenic 40.0%
!! TTGGTGTGGTGTCATTGGTT+GGG - chr4_2:30226828-30226847 Msa0597700:three_prime_UTR 45.0%
TTCAAACAAATGCGTAGCCG+TGG + chr4_2:30227102-30227121 None:intergenic 45.0%
TACACCTGTTTGCCCTTTGA+AGG - chr4_2:30227262-30227281 Msa0597700:intron 45.0%
ACAACCTTCAAAGGGCAAAC+AGG + chr4_2:30227269-30227288 None:intergenic 45.0%
GAAGGTTGTGACGAATTTGC+AGG - chr4_2:30227280-30227299 Msa0597700:intron 45.0%
CGAATTTGCAGGAAGCTGTA+TGG - chr4_2:30227291-30227310 Msa0597700:intron 45.0%
TGGGAGGGCTAAAAGATTAG+AGG - chr4_2:30228236-30228255 Msa0597700:intron 45.0%
GGGAGGGCTAAAAGATTAGA+GGG - chr4_2:30228237-30228256 Msa0597700:intron 45.0%
GGAGGGCTAAAAGATTAGAG+GGG - chr4_2:30228238-30228257 Msa0597700:intron 45.0%
GAAGAACCAGAGAAACTTGC+AGG - chr4_2:30228621-30228640 Msa0597700:intron 45.0%
TGATGCTGTCACCCATTTCA+AGG + chr4_2:30228731-30228750 None:intergenic 45.0%
TGAAATGGGTGACAGCATCA+AGG - chr4_2:30228731-30228750 Msa0597700:intron 45.0%
GAAATGGGTGACAGCATCAA+GGG - chr4_2:30228732-30228751 Msa0597700:intron 45.0%
! CAGATGAACCTGAGCTTTAG+TGG - chr4_2:30229064-30229083 Msa0597700:intron 45.0%
AACAGCAGTTCAACAGACTC+GGG + chr4_2:30229144-30229163 None:intergenic 45.0%
GAACAGCAGTTCAACAGACT+CGG + chr4_2:30229145-30229164 None:intergenic 45.0%
TGTGTAAGCCCACACAAATC+TGG + chr4_2:30229242-30229261 None:intergenic 45.0%
ACCTTCGAAAAACCGTTCAG+TGG - chr4_2:30229280-30229299 Msa0597700:CDS 45.0%
!! TCCACTGAACGGTTTTTCGA+AGG + chr4_2:30229284-30229303 None:intergenic 45.0%
TGAACCCAAAGTCCACTGAA+CGG + chr4_2:30229295-30229314 None:intergenic 45.0%
CAGGAGCTTAACAGTTAGGT+AGG + chr4_2:30229365-30229384 None:intergenic 45.0%
GGAGATTCCCTGAAGATAAG+AGG + chr4_2:30229582-30229601 None:intergenic 45.0%
GCTTGAAGTATAGCCTGTAC+TGG + chr4_2:30229603-30229622 None:intergenic 45.0%
GCAATCTTAATACGGTCTCG+AGG + chr4_2:30229651-30229670 None:intergenic 45.0%
! CTCAGAGCCATGTGTTTTAC+CGG - chr4_2:30229670-30229689 Msa0597700:CDS 45.0%
! TTTTACCGGCCATCTCTTCT+TGG - chr4_2:30229684-30229703 Msa0597700:CDS 45.0%
TGCATAACCCACAAGAGACA+AGG + chr4_2:30229726-30229745 None:intergenic 45.0%
CCCACCTCACCAAAAGTTTA+TGG - chr4_2:30229798-30229817 Msa0597700:CDS 45.0%
!! TATATAAAATACTAATATTA+AGG - chr4_2:30228982-30229001 Msa0597700:intron 5.0%
!! GTTGGTGTGGTGTCATTGGT+TGG - chr4_2:30226827-30226846 Msa0597700:three_prime_UTR 50.0%
TTTGTGTTGGAGGTGGTGCT+TGG - chr4_2:30226976-30226995 Msa0597700:three_prime_UTR 50.0%
TTGTGTTGGAGGTGGTGCTT+GGG - chr4_2:30226977-30226996 Msa0597700:three_prime_UTR 50.0%
ATGGAGAAGACCAGGAAGAG+CGG - chr4_2:30227067-30227086 Msa0597700:CDS 50.0%
!! AAGAGCGGTTGATAGAGCCA+CGG - chr4_2:30227082-30227101 Msa0597700:CDS 50.0%
ATTCGAGGGAGGATGTGTTG+AGG - chr4_2:30227129-30227148 Msa0597700:intron 50.0%
TCGAGGGGAGATTAGGTGAT+AGG - chr4_2:30227186-30227205 Msa0597700:intron 50.0%
CGAGGGGAGATTAGGTGATA+GGG - chr4_2:30227187-30227206 Msa0597700:intron 50.0%
! TTCTTTGGCTAAGGGTGTGG+AGG - chr4_2:30227418-30227437 Msa0597700:intron 50.0%
! TAAGGGTGTGGAGGCTGAAT+TGG - chr4_2:30227427-30227446 Msa0597700:intron 50.0%
! AGCGTAGGTGTTATGATCCG+CGG + chr4_2:30227461-30227480 None:intergenic 50.0%
GCTCGACTGATCATTAGCGT+AGG + chr4_2:30227476-30227495 None:intergenic 50.0%
GCAGGCGCACTTTATAGTGT+GGG - chr4_2:30227871-30227890 Msa0597700:intron 50.0%
GAGACTCCCTACAAGATGGA+AGG + chr4_2:30228852-30228871 None:intergenic 50.0%
AGCAGAGACTCCCTACAAGA+TGG + chr4_2:30228856-30228875 None:intergenic 50.0%
AGATGGGACAAAGCTCGACA+GGG + chr4_2:30228953-30228972 None:intergenic 50.0%
AAGATGGGACAAAGCTCGAC+AGG + chr4_2:30228954-30228973 None:intergenic 50.0%
CACTTGAGCCACTAAAGCTC+AGG + chr4_2:30229075-30229094 None:intergenic 50.0%
ACAGCAGTTCAACAGACTCG+GGG + chr4_2:30229143-30229162 None:intergenic 50.0%
TGTTAAGCTCCTGCGCCAAT+TGG - chr4_2:30229372-30229391 Msa0597700:CDS 50.0%
CTTCAGGGAATCTCCAGTAC+AGG - chr4_2:30229587-30229606 Msa0597700:CDS 50.0%
ACGGTCTCGAGGATCATTCA+TGG + chr4_2:30229640-30229659 None:intergenic 50.0%
GAGATGGCCGGTAAAACACA+TGG + chr4_2:30229680-30229699 None:intergenic 50.0%
TGTGTTGGAGGTGGTGCTTG+GGG - chr4_2:30226978-30226997 Msa0597700:three_prime_UTR 55.0%
GCTCTATCAACCGCTCTTCC+TGG + chr4_2:30227080-30227099 None:intergenic 55.0%
ACCTCACGGGTTTCTGTCGA+TGG + chr4_2:30227344-30227363 None:intergenic 55.0%
! CTGAATTGGTTCCTGAGCCG+CGG - chr4_2:30227441-30227460 Msa0597700:intron 55.0%
GGCAGGCGCACTTTATAGTG+TGG - chr4_2:30227870-30227889 Msa0597700:intron 55.0%
AGAGGGCCTGCAAGTTTCTC+TGG + chr4_2:30228630-30228649 None:intergenic 55.0%
GAAACTTGCAGGCCCTCTCT+TGG - chr4_2:30228632-30228651 Msa0597700:intron 55.0%
GGTGACAGCATCAAGGGCAA+GGG - chr4_2:30228738-30228757 Msa0597700:intron 55.0%
GTGACAGCATCAAGGGCAAG+GGG - chr4_2:30228739-30228758 Msa0597700:intron 55.0%
CAAGGGCAAGGGGATGATTC+AGG - chr4_2:30228749-30228768 Msa0597700:intron 55.0%
GATGGGACAAAGCTCGACAG+GGG + chr4_2:30228952-30228971 None:intergenic 55.0%
CAGTTCAACAGACTCGGGGT+TGG + chr4_2:30229139-30229158 None:intergenic 55.0%
GGCGCAGGAGCTTAACAGTT+AGG + chr4_2:30229369-30229388 None:intergenic 55.0%
GCTGACCAAGAAGAGATGGC+CGG + chr4_2:30229692-30229711 None:intergenic 55.0%
GGCTGCTGACCAAGAAGAGA+TGG + chr4_2:30229696-30229715 None:intergenic 55.0%
CGAGGGAGGATGTGTTGAGG+AGG - chr4_2:30227132-30227151 Msa0597700:intron 60.0%
GCCATCGACAGAAACCCGTG+AGG - chr4_2:30227340-30227359 Msa0597700:intron 60.0%
! GGTGTTATGATCCGCGGCTC+AGG + chr4_2:30227455-30227474 None:intergenic 60.0%
GGGTGACAGCATCAAGGGCA+AGG - chr4_2:30228737-30228756 Msa0597700:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 30226504 30230213 30226504 ID=Msa0597700;Name=Msa0597700
chr4_2 mRNA 30226504 30230213 30226504 ID=Msa0597700-mRNA-1;Parent=Msa0597700;Name=Msa0597700-mRNA-1;_AED=0.08;_eAED=0.08;_QI=354|1|1|1|0.8|0.66|6|461|458
chr4_2 exon 30226504 30226896 30226504 ID=Msa0597700-mRNA-1:exon:7697;Parent=Msa0597700-mRNA-1
chr4_2 exon 30226930 30227124 30226930 ID=Msa0597700-mRNA-1:exon:7696;Parent=Msa0597700-mRNA-1
chr4_2 exon 30227714 30227853 30227714 ID=Msa0597700-mRNA-1:exon:7695;Parent=Msa0597700-mRNA-1
chr4_2 exon 30227947 30228194 30227947 ID=Msa0597700-mRNA-1:exon:7694;Parent=Msa0597700-mRNA-1
chr4_2 exon 30228758 30228979 30228758 ID=Msa0597700-mRNA-1:exon:7693;Parent=Msa0597700-mRNA-1
chr4_2 exon 30229220 30230213 30229220 ID=Msa0597700-mRNA-1:exon:7692;Parent=Msa0597700-mRNA-1
chr4_2 five_prime_UTR 30229860 30230213 30229860 ID=Msa0597700-mRNA-1:five_prime_utr;Parent=Msa0597700-mRNA-1
chr4_2 CDS 30229220 30229859 30229220 ID=Msa0597700-mRNA-1:cds;Parent=Msa0597700-mRNA-1
chr4_2 CDS 30228758 30228979 30228758 ID=Msa0597700-mRNA-1:cds;Parent=Msa0597700-mRNA-1
chr4_2 CDS 30227947 30228194 30227947 ID=Msa0597700-mRNA-1:cds;Parent=Msa0597700-mRNA-1
chr4_2 CDS 30227714 30227853 30227714 ID=Msa0597700-mRNA-1:cds;Parent=Msa0597700-mRNA-1
chr4_2 CDS 30226998 30227124 30226998 ID=Msa0597700-mRNA-1:cds;Parent=Msa0597700-mRNA-1
chr4_2 three_prime_UTR 30226930 30226997 30226930 ID=Msa0597700-mRNA-1:three_prime_utr;Parent=Msa0597700-mRNA-1
chr4_2 three_prime_UTR 30226504 30226896 30226504 ID=Msa0597700-mRNA-1:three_prime_utr;Parent=Msa0597700-mRNA-1
Gene Sequence

>Msa0597700

ATGAACCATCATGGATACTCAAATGGTTCTCTTCAAAGTGTAAATGGTAATTTTGAAGAGAAGCTTGATGAGCTTAGAACCCTAATGGGGAAAGTTGATGATGATCCATTGAGAATAGTTTGTGTTGGAGGTGGTGCTTGGGGTAGTGTGTTTACAGCTATGTTACAAGAGGCTTATGGTAGTTTTAGAGACAAGGTTTTGATTAGGATATGGAGAAGACCAGGAAGAGCGGTTGATAGAGCCACGGCTACGCATTTGTTTGAAGTGATTAATTCGAGGGAGGATGTGTTGAGGAGGTTGATTAGGCGTTGTGCGTATTTGAAATATGTCGAGGGGAGATTAGGTGATAGGGTTCTTCATGCAGATGAGATTTTGAAAGATGGGTTTTGTTTGAATATGGTTGATACACCTGTTTGCCCTTTGAAGGTTGTGACGAATTTGCAGGAAGCTGTATGGGATGCTGACATTGTGATCAACGGCTTGCCATCGACAGAAACCCGTGAGGTGTTTGAAGAAATTAGTAAGTATTGGAAAGAGAGAATCACAGTTCCTGTCATTATTTCTTTGGCTAAGGGTGTGGAGGCTGAATTGGTTCCTGAGCCGCGGATCATAACACCTACGCTAATGATCAGTCGAGCAACTGGAGTCCCCATTGAAAATATTCTCTATCTTGGAGGTCCTAACATTGCCTCCGAGATTTACAACAAAGAATATGCAAATGCTCGAATATGTGGAGCAGAAAAATGGAGGAAACCATTGGCAAAGTTTTTGAGGCAGGCGCACTTTATAGTGTGGGACAATGTTGATCTTGTTACTCATGAAGTTATGGGTGGATTAAAGAATGTATATGCAATTGGAGCAGGGATGGTAGCTGCTTTAACGAACGAAAGTGCCACCAGCAAATCAGTCTACTTTGCTCACTGCACATCAGAGATGATTTTTATCACTCATCTATTGGCAGAAGAACCAGAGAAACTTGCAGGCCCTCTCTTGGCTGATACTTATGTAACCTTGTTGAAAGGTCGTAATGCATGGTATGGACAAAAGTTGGCCAAAGGAGAATTGAGCCTTGAAATGGGTGACAGCATCAAGGGCAAGGGGATGATTCAGGGAGTCTCTGCTGTTAAAGCATTCTATGAGCTACTGAGTCTGTCCAGCTTAAATGTCTTAGATCCTGATGAAAACAAGCATGTTGCCCCTGTCGAGCTTTGTCCCATCTTGAAGATGTTATATAAAATACTAATATTAAGGGAATCTCCAGTACAGGCTATACTTCAAGCATTACGAGATGAGACCATGAATGATCCTCGAGACCGTATTAAGATTGCTCAGAGCCATGTGTTTTACCGGCCATCTCTTCTTGGTCAGCAGCCTTAG
Protein sequence

>Msa0597700

MNHHGYSNGSLQSVNGNFEEKLDELRTLMGKVDDDPLRIVCVGGGAWGSVFTAMLQEAYGSFRDKVLIRIWRRPGRAVDRATATHLFEVINSREDVLRRLIRRCAYLKYVEGRLGDRVLHADEILKDGFCLNMVDTPVCPLKVVTNLQEAVWDADIVINGLPSTETREVFEEISKYWKERITVPVIISLAKGVEAELVPEPRIITPTLMISRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQAHFIVWDNVDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGELSLEMGDSIKGKGMIQGVSAVKAFYELLSLSSLNVLDPDENKHVAPVELCPILKMLYKILILRESPVQAILQALRDETMNDPRDRIKIAQSHVFYRPSLLGQQP*