AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1411050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411050 MtrunA17_Chr5g0430081 84.470 264 15 1 4 241 3 266 4.79e-157 446
Msa1411050 MtrunA17_Chr5g0430091 71.483 263 49 1 5 241 6 268 6.54e-131 379
Msa1411050 MtrunA17_Chr5g0430101 70.229 262 52 1 1 236 1 262 1.28e-127 370
Msa1411050 MtrunA17_Chr5g0430131 69.202 263 55 1 3 239 4 266 1.14e-126 368
Msa1411050 MtrunA17_Chr5g0430031 67.910 268 59 2 1 241 1 268 3.63e-126 367
Msa1411050 MtrunA17_Chr5g0430111 67.925 265 59 1 3 241 4 268 1.61e-125 362
Msa1411050 MtrunA17_Chr5g0430171 66.814 226 49 1 3 202 4 229 3.43e-105 303
Msa1411050 MtrunA17_Chr8g0390881 54.941 253 86 3 11 235 9 261 1.26e-89 273
Msa1411050 MtrunA17_Chr6g0484841 50.833 240 92 1 23 236 24 263 2.68e-79 247
Msa1411050 MtrunA17_Chr6g0484811 48.889 270 111 3 1 243 1 270 1.53e-78 245
Msa1411050 MtrunA17_Chr2g0310391 43.295 261 115 3 6 236 1 258 4.11e-61 199
Msa1411050 MtrunA17_Chr5g0430051 82.759 116 18 1 1 114 1 116 1.02e-60 187
Msa1411050 MtrunA17_Chr2g0310381 42.146 261 116 4 6 236 3 258 8.19e-58 191
Msa1411050 MtrunA17_Chr8g0382901 44.355 248 110 3 17 236 473 720 3.39e-57 195
Msa1411050 MtrunA17_Chr8g0382901 46.759 216 100 3 35 236 27 241 1.78e-51 179
Msa1411050 MtrunA17_Chr3g0101601 42.424 264 115 8 9 239 3 262 2.60e-50 171
Msa1411050 MtrunA17_Chr3g0101691 38.672 256 116 6 16 232 7 260 1.40e-49 169
Msa1411050 MtrunA17_Chr3g0101621 42.213 244 112 6 13 229 11 252 5.68e-49 167
Msa1411050 MtrunA17_Chr3g0101751 36.059 269 139 6 7 244 10 276 5.99e-49 168
Msa1411050 MtrunA17_Chr4g0058231 36.364 253 128 5 6 229 2 250 1.10e-48 167
Msa1411050 MtrunA17_Chr3g0101711 38.645 251 124 5 11 233 12 260 1.16e-48 167
Msa1411050 MtrunA17_Chr3g0116681 34.375 256 131 5 13 235 18 269 2.17e-48 166
Msa1411050 MtrunA17_Chr3g0101611 38.428 229 116 3 33 236 35 263 2.54e-48 166
Msa1411050 MtrunA17_Chr4g0058201 39.732 224 102 4 37 229 29 250 2.68e-47 163
Msa1411050 MtrunA17_Chr3g0101631 37.405 262 135 5 8 243 11 269 2.73e-47 163
Msa1411050 MtrunA17_Chr4g0076161 36.680 259 132 5 5 233 6 262 4.14e-47 163
Msa1411050 MtrunA17_Chr3g0101571 36.400 250 134 3 7 231 7 256 4.79e-47 162
Msa1411050 MtrunA17_Chr3g0101831 37.354 257 126 6 9 232 5 259 5.09e-47 162
Msa1411050 MtrunA17_Chr7g0258221 32.806 253 138 3 11 231 7 259 1.92e-46 161
Msa1411050 MtrunA17_Chr4g0058191 36.090 266 133 7 6 241 2 260 2.14e-46 160
Msa1411050 MtrunA17_Chr3g0101581 34.733 262 144 4 7 241 8 269 2.40e-46 161
Msa1411050 MtrunA17_Chr5g0403321 38.075 239 116 5 22 231 23 258 4.85e-46 160
Msa1411050 MtrunA17_Chr3g0101651 39.013 223 106 5 37 231 39 259 6.70e-46 160
Msa1411050 MtrunA17_Chr3g0101761 34.572 269 143 6 7 244 3 269 7.95e-46 159
Msa1411050 MtrunA17_Chr4g0047631 36.822 258 134 6 8 236 17 274 2.13e-45 158
Msa1411050 MtrunA17_Chr6g0463791 36.538 260 134 6 2 232 3 260 3.34e-45 157
Msa1411050 MtrunA17_Chr8g0344151 37.500 232 112 5 37 235 37 268 4.46e-45 157
Msa1411050 MtrunA17_Chr3g0101661 39.301 229 109 5 37 237 39 265 1.32e-44 156
Msa1411050 MtrunA17_Chr4g0058281 35.849 265 137 5 9 242 21 283 1.51e-44 156
Msa1411050 MtrunA17_Chr5g0403331 34.902 255 136 5 5 231 6 258 1.93e-44 155
Msa1411050 MtrunA17_Chr3g0101811 35.907 259 131 6 7 232 3 259 5.47e-44 155
Msa1411050 MtrunA17_Chr2g0310371 49.664 149 72 1 6 154 1 146 5.58e-44 145
Msa1411050 MtrunA17_Chr6g0472311 34.496 258 135 4 6 232 14 268 1.55e-43 154
Msa1411050 MtrunA17_Chr3g0101821 32.963 270 148 6 7 245 3 270 1.86e-43 153
Msa1411050 MtrunA17_Chr1g0174451 31.481 270 150 4 8 242 4 273 2.07e-43 153
Msa1411050 MtrunA17_Chr8g0344181 36.564 227 108 3 37 229 39 263 2.30e-43 153
Msa1411050 MtrunA17_Chr3g0101721 39.910 223 104 5 37 231 38 258 4.03e-43 152
Msa1411050 MtrunA17_Chr3g0101701 37.229 231 111 5 37 237 39 265 1.71e-42 150
Msa1411050 MtrunA17_Chr1g0174461 35.000 240 125 4 34 242 33 272 1.72e-42 150
Msa1411050 MtrunA17_Chr3g0101731 34.749 259 133 7 7 232 3 258 3.97e-42 149
Msa1411050 MtrunA17_Chr6g0465511 35.743 249 130 5 11 231 9 255 4.31e-42 149
Msa1411050 MtrunA17_Chr6g0463611 34.630 257 135 7 11 235 22 277 5.71e-42 145
Msa1411050 MtrunA17_Chr1g0162801 35.409 257 129 7 6 232 9 258 5.92e-42 149
Msa1411050 MtrunA17_Chr5g0403351 34.118 255 137 5 5 231 6 257 1.06e-41 148
Msa1411050 MtrunA17_Chr1g0174481 34.231 260 138 3 9 235 4 263 1.07e-41 148
Msa1411050 MtrunA17_Chr6g0466331 35.743 249 130 5 11 231 9 255 1.40e-41 148
Msa1411050 MtrunA17_Chr1g0156101 37.398 246 113 5 37 241 33 278 3.00e-41 147
Msa1411050 MtrunA17_Chr4g0047661 33.468 248 135 3 12 229 24 271 4.91e-41 147
Msa1411050 MtrunA17_Chr5g0445751 36.264 273 130 10 11 244 11 278 8.07e-41 142
Msa1411050 MtrunA17_Chr3g0094171 33.074 257 136 4 9 233 16 268 8.08e-41 146
Msa1411050 MtrunA17_Chr8g0357431 37.500 224 110 5 37 232 38 259 8.60e-41 146
Msa1411050 MtrunA17_Chr8g0361471 35.200 250 132 5 11 232 9 256 1.04e-40 145
Msa1411050 MtrunA17_Chr4g0047691 35.484 248 129 5 11 229 25 270 1.19e-40 146
Msa1411050 MtrunA17_Chr5g0445461 33.591 259 138 6 3 232 8 261 3.80e-40 144
Msa1411050 MtrunA17_Chr1g0162811 43.827 162 85 2 9 164 5 166 9.28e-40 143
Msa1411050 MtrunA17_Chr4g0047641 33.333 249 136 6 11 229 23 271 1.83e-39 142
Msa1411050 MtrunA17_Chr3g0101801 31.884 276 143 7 7 245 10 277 1.85e-39 142
Msa1411050 MtrunA17_Chr3g0116741 35.227 264 134 7 1 233 22 279 1.97e-39 142
Msa1411050 MtrunA17_Chr5g0431641 34.241 257 137 5 14 238 16 272 2.23e-39 142
Msa1411050 MtrunA17_Chr4g0058261 36.134 238 121 4 22 228 48 285 3.63e-39 142
Msa1411050 MtrunA17_Chr6g0463801 36.820 239 117 6 28 236 29 263 4.82e-39 141
Msa1411050 MtrunA17_Chr5g0445441 42.945 163 88 2 3 163 49 208 5.16e-39 142
Msa1411050 MtrunA17_Chr8g0357421 48.052 154 76 2 12 161 10 163 5.28e-39 141
Msa1411050 MtrunA17_Chr3g0101671 35.039 254 131 7 11 232 9 260 1.78e-38 140
Msa1411050 MtrunA17_Chr5g0445531 34.894 235 124 5 25 232 29 261 2.17e-38 139
Msa1411050 MtrunA17_Chr1g0174421 33.074 257 139 5 7 232 20 274 2.79e-38 136
Msa1411050 MtrunA17_Chr5g0430071 56.198 121 27 1 147 241 1 121 3.00e-38 136
Msa1411050 MtrunA17_Chr1g0167321 34.457 267 132 6 1 234 1 257 3.09e-38 139
Msa1411050 MtrunA17_Chr2g0280261 34.728 239 126 5 26 236 24 260 3.54e-38 139
Msa1411050 MtrunA17_Chr5g0445411 40.741 162 92 2 4 163 15 174 3.69e-38 131
Msa1411050 MtrunA17_Chr5g0445451 32.836 268 145 6 3 238 8 272 6.17e-38 138
Msa1411050 MtrunA17_Chr7g0235551 31.907 257 143 4 8 232 4 260 8.46e-38 138
Msa1411050 MtrunA17_Chr1g0156081 35.772 246 117 5 37 241 57 302 1.21e-37 138
Msa1411050 MtrunA17_Chr4g0020041 44.025 159 86 2 7 164 10 166 1.43e-37 137
Msa1411050 MtrunA17_Chr8g0372251 34.862 218 116 3 37 229 36 252 1.57e-37 137
Msa1411050 MtrunA17_Chr5g0446151 46.897 145 74 2 20 163 27 169 5.80e-37 135
Msa1411050 MtrunA17_Chr8g0344191 30.233 258 143 4 7 229 39 294 6.71e-37 136
Msa1411050 MtrunA17_Chr4g0035921 33.607 244 133 5 11 229 15 254 7.83e-37 135
Msa1411050 MtrunA17_Chr4g0011861 33.191 235 124 5 28 229 21 255 8.18e-37 131
Msa1411050 MtrunA17_Chr5g0446161 43.796 137 76 1 26 161 31 167 1.06e-36 135
Msa1411050 MtrunA17_Chr1g0156061 38.350 206 99 4 37 241 56 234 1.43e-36 134
Msa1411050 MtrunA17_Chr3g0084921 31.923 260 140 4 11 237 11 266 3.59e-36 134
Msa1411050 MtrunA17_Chr3g0117321 52.137 117 56 0 38 154 9 125 3.62e-36 124
Msa1411050 MtrunA17_Chr5g0405001 34.234 222 120 3 35 231 43 263 4.58e-36 133
Msa1411050 MtrunA17_Chr4g0011871 34.043 235 122 5 28 229 21 255 1.72e-35 131
Msa1411050 MtrunA17_Chr5g0445381 34.328 268 138 7 5 238 40 303 1.75e-35 132
Msa1411050 MtrunA17_Chr1g0174471 30.038 263 152 5 11 242 26 287 2.40e-35 131
Msa1411050 MtrunA17_Chr1g0200961 32.075 265 142 4 9 242 6 263 2.45e-35 131
Msa1411050 MtrunA17_Chr4g0030701 34.052 232 123 3 37 238 36 267 2.78e-35 131
Msa1411050 MtrunA17_Chr5g0419691 33.333 234 124 5 28 229 21 254 3.50e-35 130
Msa1411050 MtrunA17_Chr4g0024771 31.102 254 147 5 9 234 10 263 3.51e-35 130
Msa1411050 MtrunA17_Chr5g0445421 40.491 163 92 2 3 163 82 241 3.69e-35 131
Msa1411050 MtrunA17_Chr3g0094231 33.929 224 116 3 37 229 37 259 4.13e-35 130
Msa1411050 MtrunA17_Chr5g0395381 34.286 210 136 1 1 210 7 214 5.17e-35 130
Msa1411050 MtrunA17_Chr5g0406651 34.661 251 128 6 24 238 18 268 5.42e-35 130
Msa1411050 MtrunA17_Chr4g0011881 31.984 247 133 6 15 229 12 255 6.25e-35 130
Msa1411050 MtrunA17_Chr3g0086691 35.581 267 133 3 1 232 1 263 7.36e-35 130
Msa1411050 MtrunA17_Chr5g0431631 42.857 140 75 2 8 145 25 161 9.44e-35 122
Msa1411050 MtrunA17_Chr6g0484771 47.826 138 47 2 71 183 1 138 1.33e-34 121
Msa1411050 MtrunA17_Chr5g0431671 32.645 242 130 5 30 238 32 273 1.78e-34 129
Msa1411050 MtrunA17_Chr5g0402971 30.328 244 131 3 37 241 41 284 1.01e-33 124
Msa1411050 MtrunA17_Chr8g0355961 34.632 231 118 4 12 209 14 244 1.48e-33 126
Msa1411050 MtrunA17_Chr7g0218601 31.868 273 138 8 20 244 15 287 2.88e-33 125
Msa1411050 MtrunA17_Chr3g0086661 32.955 264 141 3 5 233 2 264 4.60e-33 125
Msa1411050 MtrunA17_Chr3g0086651 32.463 268 142 3 1 233 1 264 4.79e-33 125
Msa1411050 MtrunA17_Chr8g0356001 33.898 236 121 5 9 209 9 244 9.29e-33 124
Msa1411050 MtrunA17_Chr4g0046691 32.456 228 120 4 37 232 40 265 1.09e-32 120
Msa1411050 MtrunA17_Chr7g0265611 29.771 262 142 5 15 234 25 286 1.87e-32 123
Msa1411050 MtrunA17_Chr4g0030711 33.047 233 124 2 43 244 44 275 1.94e-32 124
Msa1411050 MtrunA17_Chr5g0395321 31.624 234 135 2 1 210 7 239 1.05e-31 121
Msa1411050 MtrunA17_Chr1g0174441 28.467 274 163 4 1 242 20 292 1.19e-31 121
Msa1411050 MtrunA17_Chr4g0052861 28.736 261 146 4 8 229 3 262 4.25e-31 119
Msa1411050 MtrunA17_Chr8g0362701 31.395 258 143 4 7 232 8 263 8.33e-31 119
Msa1411050 MtrunA17_Chr4g0061381 31.839 223 117 2 45 232 40 262 1.11e-30 118
Msa1411050 MtrunA17_Chr4g0011921 31.765 255 133 7 12 229 4 254 2.07e-30 117
Msa1411050 MtrunA17_Chr5g0431501 35.398 226 113 5 37 229 34 259 3.10e-30 117
Msa1411050 MtrunA17_Chr5g0431461 35.398 226 113 5 37 229 34 259 3.10e-30 117
Msa1411050 MtrunA17_Chr4g0052851 31.507 219 123 2 37 228 34 252 3.96e-30 117
Msa1411050 MtrunA17_Chr4g0011931 32.549 255 131 9 12 229 4 254 6.25e-30 113
Msa1411050 MtrunA17_Chr4g0046631 29.365 252 133 5 26 234 35 284 7.73e-30 116
Msa1411050 MtrunA17_Chr4g0011901 31.381 239 129 6 23 229 19 254 9.29e-30 115
Msa1411050 MtrunA17_Chr5g0401681 28.462 260 144 2 7 229 8 262 1.16e-29 115
Msa1411050 MtrunA17_Chr4g0017411 31.602 231 126 5 37 235 31 261 1.39e-29 115
Msa1411050 MtrunA17_Chr7g0254641 29.565 230 128 2 37 232 38 267 1.85e-29 115
Msa1411050 MtrunA17_Chr8g0339331 32.203 236 119 7 36 230 38 273 3.28e-29 114
Msa1411050 MtrunA17_Chr7g0258211 30.451 266 150 6 9 239 8 273 3.62e-29 114
Msa1411050 MtrunA17_Chr4g0030741 32.946 258 139 6 1 231 30 280 4.24e-29 112
Msa1411050 MtrunA17_Chr7g0218611 32.016 253 127 6 37 244 34 286 4.27e-29 114
Msa1411050 MtrunA17_Chr3g0101741 35.450 189 93 4 71 232 1 187 8.72e-29 112
Msa1411050 MtrunA17_Chr1g0207851 32.877 219 116 4 43 231 45 262 1.23e-28 111
Msa1411050 MtrunA17_Chr5g0395331 36.471 170 107 1 11 180 12 180 1.54e-28 112
Msa1411050 MtrunA17_Chr8g0339311 31.933 238 121 4 33 229 40 277 1.87e-28 112
Msa1411050 MtrunA17_Chr1g0207841 32.877 219 117 3 43 231 45 263 2.13e-28 112
Msa1411050 MtrunA17_Chr1g0160851 29.520 271 154 6 3 240 5 271 3.13e-28 111
Msa1411050 MtrunA17_Chr4g0011981 31.325 249 131 8 28 238 22 268 4.04e-28 111
Msa1411050 MtrunA17_Chr7g0224551 30.040 253 141 6 7 231 4 248 4.84e-28 111
Msa1411050 MtrunA17_Chr4g0039901 35.841 226 113 4 26 219 24 249 6.17e-28 110
Msa1411050 MtrunA17_Chr7g0224561 30.040 253 141 6 7 231 4 248 7.85e-28 110
Msa1411050 MtrunA17_Chr5g0401691 28.346 254 143 4 7 228 29 275 1.14e-27 110
Msa1411050 MtrunA17_Chr1g0205361 32.068 237 128 5 33 236 31 267 1.33e-27 110
Msa1411050 MtrunA17_Chr1g0205371 28.063 253 149 3 10 229 6 258 1.35e-27 110
Msa1411050 MtrunA17_Chr2g0314721 37.500 160 99 1 10 168 17 176 3.20e-27 108
Msa1411050 MtrunA17_Chr2g0296651 30.268 261 140 3 11 229 2 262 3.64e-27 108
Msa1411050 MtrunA17_Chr4g0046671 27.542 236 131 3 37 232 45 280 1.63e-26 104
Msa1411050 MtrunA17_Chr4g0011961 29.787 235 130 6 28 229 22 254 4.75e-26 105
Msa1411050 MtrunA17_Chr7g0255531 25.191 262 146 5 12 232 9 261 8.72e-26 105
Msa1411050 MtrunA17_Chr6g0458561 28.261 276 155 8 3 237 23 296 1.10e-25 104
Msa1411050 MtrunA17_Chr6g0451691 25.685 292 164 7 1 243 9 296 1.16e-25 104
Msa1411050 MtrunA17_Chr4g0057001 28.571 245 140 4 15 228 32 272 1.65e-25 104
Msa1411050 MtrunA17_Chr2g0314731 33.333 198 128 4 9 203 5 201 4.28e-25 102
Msa1411050 MtrunA17_Chr6g0451751 26.217 267 153 3 9 231 14 280 5.69e-25 102
Msa1411050 MtrunA17_Chr8g0362481 31.937 191 98 2 71 229 1 191 9.64e-25 101
Msa1411050 MtrunA17_Chr4g0052881 28.782 271 149 4 8 235 3 272 9.90e-25 102
Msa1411050 MtrunA17_Chr1g0164211 38.411 151 90 2 32 180 25 174 1.56e-24 101
Msa1411050 MtrunA17_Chr4g0053621 27.203 261 147 4 12 231 9 267 1.97e-24 101
Msa1411050 MtrunA17_Chr6g0466901 28.520 277 150 5 9 239 8 282 3.41e-24 100
Msa1411050 MtrunA17_Chr6g0451681 32.727 165 103 2 1 163 32 190 5.52e-24 99.8
Msa1411050 MtrunA17_Chr6g0451741 24.828 290 167 5 1 243 29 314 8.11e-24 99.8
Msa1411050 MtrunA17_Chr2g0304871 28.000 250 136 5 36 241 34 283 1.58e-23 98.6
Msa1411050 MtrunA17_Chr6g0466941 26.740 273 152 5 3 231 4 272 2.35e-23 98.2
Msa1411050 MtrunA17_Chr2g0296661 28.139 231 126 1 43 233 39 269 3.26e-23 97.8
Msa1411050 MtrunA17_Chr5g0431511 31.416 226 122 4 37 229 34 259 6.07e-23 97.1
Msa1411050 MtrunA17_Chr6g0451781 28.571 238 126 3 44 237 82 319 7.86e-23 96.7
Msa1411050 MtrunA17_Chr3g0082701 25.912 274 155 5 3 231 9 279 9.09e-23 96.7
Msa1411050 MtrunA17_Chr4g0008101 26.592 267 144 5 10 228 15 277 9.63e-23 96.7
Msa1411050 MtrunA17_Chr5g0445541 42.574 101 56 1 14 112 16 116 1.16e-22 90.1
Msa1411050 MtrunA17_Chr7g0246221 28.205 273 158 5 1 238 1 270 1.36e-22 95.9
Msa1411050 MtrunA17_Chr4g0046331 27.966 236 139 8 27 234 24 256 1.96e-22 95.5
Msa1411050 MtrunA17_Chr6g0451801 26.909 275 151 6 2 231 10 279 2.12e-22 93.6
Msa1411050 MtrunA17_Chr4g0046351 27.966 236 139 8 27 234 24 256 2.26e-22 95.5
Msa1411050 MtrunA17_Chr6g0451641 26.471 272 151 6 5 232 9 275 3.18e-22 95.1
Msa1411050 MtrunA17_Chr4g0046321 27.119 236 141 7 27 234 24 256 3.69e-22 94.7
Msa1411050 MtrunA17_Chr1g0176831 26.812 276 165 4 1 244 31 301 3.96e-22 94.7
Msa1411050 MtrunA17_Chr7g0246131 26.641 259 153 3 4 229 5 259 1.09e-21 93.2
Msa1411050 MtrunA17_Chr8g0351801 30.043 233 125 6 46 242 44 274 1.20e-21 93.2
Msa1411050 MtrunA17_Chr1g0213671 34.532 139 88 3 32 167 30 168 6.10e-21 91.3
Msa1411050 MtrunA17_Chr1g0197851 28.462 260 150 6 8 231 4 263 2.57e-20 89.4
Msa1411050 MtrunA17_Chr1g0197891 28.916 249 141 6 17 231 17 263 7.90e-20 87.8
Msa1411050 MtrunA17_Chr5g0445341 43.529 85 47 1 71 154 1 85 1.13e-19 80.5
Msa1411050 MtrunA17_Chr5g0413911 37.037 135 81 2 37 167 43 177 1.59e-19 87.0
Msa1411050 MtrunA17_Chr1g0200951 27.500 240 135 8 26 229 51 287 2.72e-19 86.7
Msa1411050 MtrunA17_Chr4g0076181 48.052 77 40 0 71 147 1 77 4.15e-19 81.6
Msa1411050 MtrunA17_Chr1g0197881 28.462 260 149 7 8 231 4 262 7.94e-19 85.1
Msa1411050 MtrunA17_Chr4g0074581 31.217 189 107 5 2 167 16 204 1.16e-18 84.7
Msa1411050 MtrunA17_Chr1g0210091 29.825 171 116 2 15 181 41 211 2.56e-18 83.6
Msa1411050 MtrunA17_Chr5g0431601 44.578 83 45 1 71 153 1 82 2.79e-18 77.0
Msa1411050 MtrunA17_Chr1g0198191 30.675 163 105 5 7 164 18 177 3.40e-18 83.2
Msa1411050 MtrunA17_Chr4g0039391 36.957 138 85 2 43 178 42 179 3.71e-18 83.2
Msa1411050 MtrunA17_Chr1g0197871 28.137 263 151 6 10 234 6 268 4.69e-18 82.8
Msa1411050 MtrunA17_Chr4g0056951 27.236 246 137 4 17 228 29 266 8.49e-18 82.0
Msa1411050 MtrunA17_Chr3g0107561 26.022 269 150 6 11 234 19 283 3.19e-17 79.7
Msa1411050 MtrunA17_Chr6g0451761 27.600 250 140 7 19 238 20 258 4.50e-17 78.6
Msa1411050 MtrunA17_Chr5g0419451 26.829 246 135 9 21 230 45 281 1.29e-16 78.6
Msa1411050 MtrunA17_Chr7g0246121 33.714 175 112 2 6 180 7 177 1.46e-16 78.6
Msa1411050 MtrunA17_Chr5g0409051 32.335 167 103 5 13 170 5 170 1.47e-16 78.6
Msa1411050 MtrunA17_Chr8g0346261 27.586 232 129 9 38 234 86 313 1.83e-16 78.2
Msa1411050 MtrunA17_Chr7g0246181 28.788 264 148 4 4 232 5 263 3.03e-15 74.7
Msa1411050 MtrunA17_Chr5g0432751 24.186 215 127 4 35 214 32 245 3.28e-15 74.3
Msa1411050 MtrunA17_Chr3g0105751 31.677 161 97 5 9 160 18 174 1.16e-14 72.8
Msa1411050 MtrunA17_Chr2g0280071 26.901 171 115 3 1 167 34 198 4.79e-14 71.2
Msa1411050 MtrunA17_Chr2g0280001 31.111 135 89 2 37 167 64 198 8.48e-14 68.2
Msa1411050 MtrunA17_Chr7g0246151 27.132 258 151 3 4 228 5 258 1.65e-13 69.3
Msa1411050 MtrunA17_Chr6g0484781 49.254 67 34 0 1 67 1 67 2.62e-13 63.2
Msa1411050 MtrunA17_Chr1g0176861 45.977 87 42 2 10 93 10 94 3.58e-13 63.9
Msa1411050 MtrunA17_Chr8g0370651 23.776 286 174 6 3 244 11 296 9.58e-13 67.4
Msa1411050 MtrunA17_Chr8g0370641 24.335 263 155 6 26 244 30 292 1.23e-12 67.0
Msa1411050 MtrunA17_Chr2g0280051 29.630 135 91 2 37 167 74 208 1.23e-12 66.2
Msa1411050 MtrunA17_Chr6g0458571 38.835 103 58 4 12 111 32 132 1.58e-12 63.2
Msa1411050 MtrunA17_Chr2g0314771 30.370 135 91 3 71 203 1 134 3.63e-12 62.8
Msa1411050 MtrunA17_Chr3g0107611 28.395 162 99 5 6 160 26 177 6.93e-12 64.7
Msa1411050 MtrunA17_Chr3g0107541 31.967 122 74 3 45 160 59 177 8.14e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411050 AT3G48320.1 39.764 254 124 5 1 229 1 250 5.60e-55 184
Msa1411050 AT3G48280.1 35.156 256 140 5 6 236 1 255 5.32e-49 168
Msa1411050 AT3G48310.1 39.091 220 109 3 37 231 33 252 1.95e-48 166
Msa1411050 AT3G48290.1 37.662 231 119 4 24 229 21 251 1.35e-46 161
Msa1411050 AT3G48290.2 37.662 231 119 4 24 229 21 251 2.56e-46 161
Msa1411050 AT2G30770.1 36.842 228 114 3 37 234 34 261 3.32e-46 160
Msa1411050 AT2G30750.1 36.626 243 122 4 22 234 21 261 9.11e-45 157
Msa1411050 AT5G07990.1 33.984 256 139 2 7 232 4 259 2.19e-44 156
Msa1411050 AT3G48270.1 34.538 249 138 4 6 229 1 249 4.25e-44 155
Msa1411050 AT1G11610.2 37.668 223 109 3 37 229 34 256 2.51e-43 153
Msa1411050 AT1G11610.1 37.668 223 109 3 37 229 34 256 2.99e-43 153
Msa1411050 AT3G48300.1 37.900 219 111 3 38 231 31 249 3.81e-43 152
Msa1411050 AT3G48300.2 37.900 219 111 3 38 231 33 251 3.93e-43 152
Msa1411050 AT5G24960.2 34.211 228 120 4 37 234 34 261 5.66e-42 147
Msa1411050 AT3G26300.1 33.588 262 135 5 4 231 2 258 7.13e-42 149
Msa1411050 AT4G13310.2 34.615 234 121 3 31 232 27 260 8.23e-42 147
Msa1411050 AT5G24960.1 34.211 228 120 4 37 234 34 261 3.76e-41 147
Msa1411050 AT5G42590.1 33.969 262 133 6 6 233 4 259 5.23e-41 147
Msa1411050 AT4G13310.1 34.615 234 121 3 31 232 27 260 7.06e-41 146
Msa1411050 AT5G24950.1 32.046 259 145 4 6 234 3 260 2.40e-40 145
Msa1411050 AT3G26310.1 34.538 249 118 4 33 238 21 267 4.85e-40 144
Msa1411050 AT5G57260.1 33.043 230 120 3 35 231 29 257 1.01e-39 143
Msa1411050 AT3G26290.1 33.469 245 121 6 28 235 23 262 3.15e-39 142
Msa1411050 AT3G26290.2 33.469 245 121 6 28 235 36 275 3.99e-39 142
Msa1411050 AT3G26330.1 33.051 236 120 4 33 233 28 260 4.20e-39 142
Msa1411050 AT4G20235.1 36.752 234 138 5 6 229 1 234 5.94e-39 138
Msa1411050 AT3G26320.1 32.661 248 131 5 19 233 16 260 1.13e-38 140
Msa1411050 AT5G25130.1 34.510 255 128 7 7 229 6 253 1.14e-38 140
Msa1411050 AT4G13290.1 32.353 238 129 3 28 233 25 262 1.35e-38 140
Msa1411050 AT1G13110.1 43.293 164 93 0 7 170 3 166 1.06e-37 138
Msa1411050 AT1G13080.1 38.996 259 120 6 7 229 3 259 2.10e-37 137
Msa1411050 AT3G26180.1 41.358 162 95 0 9 170 3 164 4.95e-37 136
Msa1411050 AT3G26280.1 45.294 170 83 3 11 180 16 175 1.48e-36 135
Msa1411050 AT3G26280.2 45.294 170 83 3 11 180 33 192 1.67e-36 135
Msa1411050 AT2G24180.1 48.800 125 64 0 37 161 37 161 2.03e-36 134
Msa1411050 AT5G25180.1 33.735 249 133 4 19 235 11 259 2.75e-36 134
Msa1411050 AT3G26190.1 48.120 133 69 0 35 167 27 159 5.37e-36 133
Msa1411050 AT5G25120.1 32.950 261 136 7 7 235 6 259 5.86e-36 133
Msa1411050 AT3G26170.1 43.114 167 85 3 9 170 3 164 6.67e-36 133
Msa1411050 AT3G44250.1 39.698 199 86 4 35 199 27 225 8.32e-36 133
Msa1411050 AT1G13090.1 48.120 133 69 0 35 167 27 159 1.11e-35 129
Msa1411050 AT3G26150.1 41.420 169 90 2 5 170 2 164 3.00e-35 131
Msa1411050 AT3G53280.1 46.269 134 72 0 35 168 27 160 1.81e-34 129
Msa1411050 AT3G26270.1 45.775 142 76 1 37 178 33 173 3.30e-34 128
Msa1411050 AT1G13090.2 48.120 133 69 0 35 167 27 159 4.10e-34 128
Msa1411050 AT5G25140.1 32.031 256 133 5 7 229 6 253 9.74e-34 127
Msa1411050 AT2G02580.1 33.962 265 134 7 4 233 2 260 1.10e-33 127
Msa1411050 AT3G26200.1 49.624 133 67 0 35 167 27 159 1.62e-33 126
Msa1411050 AT5G06900.1 30.702 228 126 2 37 232 35 262 4.37e-33 125
Msa1411050 AT4G20240.2 34.222 225 118 4 35 229 32 256 4.76e-33 124
Msa1411050 AT4G20240.1 34.222 225 118 4 35 229 32 256 1.06e-32 124
Msa1411050 AT3G26210.1 50.735 136 66 1 43 178 38 172 1.13e-32 124
Msa1411050 AT3G53300.1 46.617 133 71 0 35 167 27 159 1.92e-32 124
Msa1411050 AT3G26220.1 44.000 150 79 1 11 160 9 153 9.88e-32 122
Msa1411050 AT2G42250.1 39.881 168 100 1 1 167 5 172 3.03e-31 120
Msa1411050 AT4G13770.1 39.623 159 94 2 23 180 17 174 5.17e-31 120
Msa1411050 AT4G36220.1 31.280 211 119 3 44 229 48 257 5.28e-31 120
Msa1411050 AT2G45560.3 36.416 173 105 3 11 179 10 181 7.19e-31 114
Msa1411050 AT2G45560.2 32.143 252 135 4 11 226 10 261 9.33e-31 116
Msa1411050 AT3G26160.1 43.284 134 76 0 37 170 31 164 9.72e-31 119
Msa1411050 AT5G04330.1 32.911 237 121 7 37 237 33 267 5.03e-30 117
Msa1411050 AT2G45560.1 32.143 252 135 4 11 226 10 261 2.05e-29 115
Msa1411050 AT4G31500.1 32.353 238 128 7 23 228 17 253 2.89e-29 115
Msa1411050 AT4G31970.1 30.400 250 128 5 38 241 33 282 1.13e-28 113
Msa1411050 AT4G12300.1 29.528 254 140 5 7 228 20 266 1.53e-28 113
Msa1411050 AT5G67310.1 25.769 260 157 5 6 232 15 271 2.02e-28 112
Msa1411050 AT4G37430.1 29.091 275 146 7 8 236 1 272 4.19e-28 112
Msa1411050 AT5G10600.1 35.632 174 106 2 5 177 20 188 9.60e-28 110
Msa1411050 AT1G13100.1 44.800 125 66 1 46 170 38 159 1.27e-27 110
Msa1411050 AT5G06905.1 30.588 255 141 5 10 232 7 257 1.85e-27 110
Msa1411050 AT4G31940.1 31.535 241 118 4 38 231 33 273 2.93e-27 109
Msa1411050 AT4G37320.1 29.044 272 136 7 1 228 1 259 5.27e-27 108
Msa1411050 AT4G12320.1 29.688 256 141 5 7 230 20 268 9.72e-27 108
Msa1411050 AT5G10610.1 36.646 161 97 2 1 160 1 157 1.44e-26 107
Msa1411050 AT3G26230.1 38.255 149 91 1 12 160 3 150 2.96e-26 106
Msa1411050 AT5G57220.1 27.519 258 147 5 5 228 4 255 3.97e-26 106
Msa1411050 AT4G15360.1 35.882 170 101 2 9 170 13 182 4.76e-26 106
Msa1411050 AT3G26180.2 45.946 111 60 0 9 119 3 113 4.78e-26 104
Msa1411050 AT3G20110.1 30.337 267 148 6 10 242 11 273 4.81e-26 106
Msa1411050 AT3G26830.1 37.580 157 97 1 11 167 4 159 9.49e-26 105
Msa1411050 AT4G15330.1 37.059 170 102 3 2 170 8 173 3.29e-25 103
Msa1411050 AT4G37330.1 29.588 267 138 8 1 228 1 256 4.32e-25 103
Msa1411050 AT2G40890.1 25.523 239 133 4 32 229 23 257 4.53e-25 103
Msa1411050 AT5G36220.1 28.421 285 153 8 1 240 1 279 4.63e-25 103
Msa1411050 AT3G20940.1 29.046 241 139 4 23 231 29 269 9.36e-25 102
Msa1411050 AT3G10560.1 30.677 251 134 5 7 225 25 267 2.30e-24 101
Msa1411050 AT4G37340.1 27.206 272 146 6 12 236 6 272 5.23e-24 100
Msa1411050 AT4G37410.1 30.385 260 137 10 6 228 5 257 6.38e-24 100
Msa1411050 AT3G20950.1 34.078 179 109 5 4 176 11 186 4.15e-23 97.8
Msa1411050 AT2G45550.1 29.134 254 137 6 11 227 10 257 4.24e-23 97.8
Msa1411050 AT1G33720.1 36.747 166 87 4 11 165 10 168 6.81e-23 97.1
Msa1411050 AT3G25180.2 34.591 159 98 3 13 165 12 170 7.78e-23 96.3
Msa1411050 AT3G52970.2 35.385 130 83 1 37 165 37 166 9.44e-23 97.1
Msa1411050 AT3G20140.1 29.150 247 143 4 23 237 29 275 9.44e-23 96.7
Msa1411050 AT3G52970.1 35.385 130 83 1 37 165 37 166 9.81e-23 96.7
Msa1411050 AT5G44620.1 28.139 231 131 3 45 243 55 282 2.08e-22 95.9
Msa1411050 AT4G37310.1 28.631 241 133 5 33 234 27 267 2.22e-22 95.9
Msa1411050 AT3G25180.1 34.591 159 98 3 13 165 12 170 2.94e-22 95.5
Msa1411050 AT2G23190.1 28.148 270 142 9 11 234 49 312 3.67e-22 95.1
Msa1411050 AT4G37400.1 27.734 256 147 6 6 228 5 255 6.35e-22 94.4
Msa1411050 AT1G74550.1 34.810 158 93 4 9 163 1 151 9.36e-22 94.0
Msa1411050 AT1G01280.1 28.696 230 129 3 43 237 39 268 1.09e-21 94.0
Msa1411050 AT4G22710.1 27.477 222 120 4 45 229 62 279 2.24e-21 92.8
Msa1411050 AT4G12330.1 28.959 221 122 3 43 228 53 273 3.23e-21 92.4
Msa1411050 AT4G22690.1 27.027 222 121 4 45 229 93 310 8.43e-21 91.3
Msa1411050 AT2G14100.1 30.620 258 146 5 12 236 18 275 8.59e-21 91.3
Msa1411050 AT5G09970.1 28.000 250 140 8 29 242 62 307 9.24e-21 91.3
Msa1411050 AT2G25160.2 27.372 274 152 7 1 231 1 270 1.20e-20 90.5
Msa1411050 AT2G25160.1 27.372 274 152 7 1 231 1 270 1.94e-20 90.1
Msa1411050 AT4G12310.1 27.876 226 131 2 43 236 51 276 3.14e-20 89.7
Msa1411050 AT3G20080.2 36.774 155 96 2 23 176 29 182 3.35e-20 89.4
Msa1411050 AT3G20080.1 36.774 155 96 2 23 176 29 182 3.35e-20 89.4
Msa1411050 AT1G50520.1 28.125 224 127 5 45 234 52 275 7.89e-20 88.6
Msa1411050 AT3G32047.1 37.500 112 69 1 47 157 53 164 1.19e-19 87.8
Msa1411050 AT4G37360.1 27.626 257 140 8 11 226 5 256 2.08e-19 87.0
Msa1411050 AT3G20090.2 38.776 147 88 2 12 156 18 164 2.44e-19 87.0
Msa1411050 AT2G46660.1 25.830 271 155 9 3 233 31 295 2.56e-19 87.0
Msa1411050 AT2G45570.1 28.390 236 132 4 43 241 45 280 4.85e-19 86.3
Msa1411050 AT3G20130.1 32.051 156 97 3 47 194 53 207 5.22e-19 85.9
Msa1411050 AT4G37370.1 26.766 269 150 6 2 232 3 262 1.05e-18 85.1
Msa1411050 AT2G05180.1 38.136 118 72 1 47 163 52 169 1.36e-18 84.7
Msa1411050 AT3G61880.1 26.908 249 137 8 22 233 55 295 1.63e-18 84.7
Msa1411050 AT3G61880.2 26.908 249 137 8 22 233 55 295 1.93e-18 84.3
Msa1411050 AT4G31950.1 26.690 281 143 6 7 241 8 271 2.55e-18 84.0
Msa1411050 AT5G04630.1 31.098 164 105 3 8 167 14 173 1.73e-17 81.6
Msa1411050 AT2G23220.1 35.570 149 93 2 37 182 47 195 2.23e-17 81.3
Msa1411050 AT3G61040.2 26.293 232 139 2 35 234 32 263 3.42e-17 80.5
Msa1411050 AT1G11600.1 32.051 156 101 4 1 152 1 155 6.06e-17 80.1
Msa1411050 AT3G53305.1 43.299 97 55 0 71 167 1 97 6.06e-17 79.3
Msa1411050 AT3G61040.1 26.293 232 139 2 35 234 32 263 6.80e-17 79.7
Msa1411050 AT5G35715.1 45.263 95 52 0 71 165 1 95 8.39e-17 79.3
Msa1411050 AT1G74540.1 31.677 161 99 4 6 165 3 153 8.86e-17 79.3
Msa1411050 AT3G03470.1 32.749 171 101 4 1 164 1 164 1.14e-16 79.3
Msa1411050 AT3G20100.1 28.185 259 149 7 9 231 11 268 1.26e-16 79.0
Msa1411050 AT3G20120.4 31.169 231 119 8 47 243 52 276 1.84e-16 78.6
Msa1411050 AT4G15350.1 34.356 163 99 2 10 170 14 170 4.54e-16 77.4
Msa1411050 AT2G45580.3 29.082 196 107 2 43 206 45 240 1.13e-15 75.9
Msa1411050 AT1G58260.1 32.727 165 97 4 2 160 8 164 1.15e-15 76.3
Msa1411050 AT2G45580.1 36.029 136 86 1 43 178 45 179 1.78e-15 75.9
Msa1411050 AT1G74110.1 23.810 273 159 8 4 231 26 294 4.17e-15 74.7
Msa1411050 AT2G27000.1 34.959 123 76 2 50 170 54 174 4.93e-15 74.3
Msa1411050 AT1G50560.1 28.947 228 127 5 47 239 54 281 6.88e-15 73.9
Msa1411050 AT5G42580.1 26.592 267 146 5 7 239 12 262 8.53e-15 73.6
Msa1411050 AT3G20960.2 32.479 117 72 1 61 170 67 183 1.25e-14 73.2
Msa1411050 AT5G47990.1 33.537 164 107 2 9 170 14 177 9.96e-14 70.5
Msa1411050 AT4G15330.2 31.765 170 83 4 2 170 8 145 4.69e-13 68.6
Msa1411050 AT3G10570.1 32.759 116 77 1 53 167 63 178 5.45e-13 68.6
Msa1411050 AT1G28430.1 32.934 167 108 2 8 170 9 175 5.65e-13 68.2
Msa1411050 AT1G79370.1 28.049 164 100 4 7 160 12 167 1.39e-12 67.4
Msa1411050 AT5G04660.1 30.556 108 74 1 61 167 69 176 1.89e-12 66.6
Msa1411050 AT3G28740.1 32.877 146 95 2 37 179 40 185 3.73e-12 65.9
Msa1411050 AT3G53290.1 40.244 82 49 0 86 167 8 89 1.83e-11 63.5

Find 44 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTGAATATGGTCCTTAT+TGG 0.251028 tig0023720:+15138 Msa1411050:CDS
CCACCAACACTACCAATAAT+TGG 0.262933 tig0023720:+14894 Msa1411050:CDS
CCAAGTTGTAAGGACATAAT+TGG 0.268535 tig0023720:-14981 None:intergenic
GTAAGAAGAATTTGAATAAA+AGG 0.278800 tig0023720:-14830 None:intergenic
GAAGAAGGAGTTGGATGTTT+TGG 0.283479 tig0023720:+15232 Msa1411050:CDS
ATCCGGCTGATTATGTTTCT+TGG 0.293757 tig0023720:+15425 Msa1411050:CDS
AGGTGAAGGTTTCCAATTAT+TGG 0.299477 tig0023720:-14906 None:intergenic
TACCTCATCAAGTGCTTTAC+CGG 0.312775 tig0023720:-18602 None:intergenic
GAAGATGAAATAACAATTGT+TGG 0.315561 tig0023720:-15011 None:intergenic
TTGAGATGTTTGGTCCTATT+AGG 0.337546 tig0023720:+15210 Msa1411050:CDS
TCTTCGGCCGACTTGCAAAA+TGG 0.341333 tig0023720:-15070 None:intergenic
TTCTTTACACTACGCCAATA+AGG 0.348410 tig0023720:-15152 None:intergenic
AGCTGAGATGCTTGAGTCTT+CGG 0.369148 tig0023720:-15086 None:intergenic
CCAATTATTGGTAGTGTTGG+TGG 0.376931 tig0023720:-14894 None:intergenic
TCCAACTCCTTCTTCCTAAT+AGG 0.390766 tig0023720:-15224 None:intergenic
GCTGATTATGTTTCTTGGCT+AGG 0.395850 tig0023720:+15430 Msa1411050:CDS
GTCATTGGAGAAAGTTGCTT+TGG 0.409403 tig0023720:+15259 Msa1411050:CDS
GCTTCAAAAGTTGAGATGTT+TGG 0.415220 tig0023720:+15200 Msa1411050:CDS
TGTAGACAAAGTTCGTCATC+AGG 0.429411 tig0023720:+18663 Msa1411050:CDS
GCAATTTGATTTGAAGAAGT+TGG 0.436295 tig0023720:+15369 Msa1411050:CDS
TGGAACTTGGCCAAGTTGTA+AGG 0.439993 tig0023720:-14991 None:intergenic
CCACATACCTGAAGATCAAA+AGG 0.443680 tig0023720:-15454 None:intergenic
AAATAACAATTGTTGGAACT+TGG 0.449231 tig0023720:-15004 None:intergenic
ATTGGAAACCTTCACCTACT+AGG 0.455841 tig0023720:+14912 Msa1411050:CDS
TAAAGCACTTGATGAGGTAT+TGG 0.465167 tig0023720:+18606 Msa1411050:CDS
CCAATTATGTCCTTACAACT+TGG 0.466438 tig0023720:+14981 Msa1411050:CDS
TTTCCAATTATTGGTAGTGT+TGG 0.478817 tig0023720:-14897 None:intergenic
TATGTGGAAGTTTGCCTAGT+AGG 0.486705 tig0023720:-14926 None:intergenic
TTGAAGAAGTTGGTTCAAGA+AGG 0.489675 tig0023720:+15379 Msa1411050:CDS
GTTTGGTCCTATTAGGAAGA+AGG 0.490956 tig0023720:+15217 Msa1411050:CDS
ACACGAACCTGCAAGAAAAC+CGG 0.496164 tig0023720:+18583 Msa1411050:CDS
ATTGGTAGTGTTGGTGGACC+TGG 0.497551 tig0023720:-14888 None:intergenic
CAAGAAGGAATGGCTATGCT+TGG 0.502962 tig0023720:+15394 Msa1411050:CDS
GGTATGTGAAAGTGAAGAGA+AGG 0.525580 tig0023720:-14809 None:intergenic
TCCTATTAGGAAGAAGGAGT+TGG 0.526720 tig0023720:+15223 Msa1411050:CDS
GAAGTTGGTTCAAGAAGGAA+TGG 0.545886 tig0023720:+15384 Msa1411050:CDS
GAAGTTTGCCTAGTAGGTGA+AGG 0.555123 tig0023720:-14920 None:intergenic
AGCCAAGAAACATAATCAGC+CGG 0.559332 tig0023720:-15427 None:intergenic
GGCCTCTGAATTATCGGAGA+CGG 0.580649 tig0023720:-18687 None:intergenic
CACATACCTGAAGATCAAAA+GGG 0.590120 tig0023720:-15453 None:intergenic
GTAGACAAAGTTCGTCATCA+GGG 0.597039 tig0023720:+18664 Msa1411050:CDS
AGTGATTGAAGTGTTCTATG+TGG 0.604927 tig0023720:-14942 None:intergenic
AACCGGTAAAGCACTTGATG+AGG 0.618427 tig0023720:+18600 Msa1411050:CDS
GGTAGTGTTGGTGGACCTGG+TGG 0.649633 tig0023720:-14885 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATAAATTTTTTTAATAAGT+AGG + tig0023720:15852-15871 Msa1411050:intron 10.0%
!! TTGAAAAAAATAATCAATTA+GGG - tig0023720:16011-16030 None:intergenic 10.0%
!! AAAAATAAAATCAAGTCAAT+AGG - tig0023720:15503-15522 None:intergenic 15.0%
!! CATAATATTAAGAAATAAGA+GGG - tig0023720:15646-15665 None:intergenic 15.0%
!! TCATAATATTAAGAAATAAG+AGG - tig0023720:15647-15666 None:intergenic 15.0%
!! AGTACTAAAATATTGAAATT+TGG - tig0023720:15755-15774 None:intergenic 15.0%
!!! TATGTTTATATTGCTTTAAA+CGG + tig0023720:15944-15963 Msa1411050:intron 15.0%
!! GTTGAAAAAAATAATCAATT+AGG - tig0023720:16012-16031 None:intergenic 15.0%
!! ACAATAATACTATATAAGTA+AGG + tig0023720:16324-16343 Msa1411050:intron 15.0%
!! AAAAGCTAAAATTGTTATAT+CGG + tig0023720:16963-16982 Msa1411050:intron 15.0%
!!! AATGATTCTTTTTTTTTTGT+TGG - tig0023720:17009-17028 None:intergenic 15.0%
!!! ATAAATTGATTTTCGAAATT+GGG - tig0023720:18127-18146 None:intergenic 15.0%
!! AAAGAGATATAAGTAATAAA+AGG + tig0023720:18219-18238 Msa1411050:intron 15.0%
!! GTAAGAAGAATTTGAATAAA+AGG - tig0023720:14833-14852 None:intergenic 20.0%
!! TATTGTGTATAAGATGATAT+TGG + tig0023720:15331-15350 Msa1411050:intron 20.0%
!! ATTGTGTATAAGATGATATT+GGG + tig0023720:15332-15351 Msa1411050:intron 20.0%
!!! ACTTTATTATTGCATAGTTT+TGG + tig0023720:15563-15582 Msa1411050:intron 20.0%
!!! CTTTATTATTGCATAGTTTT+GGG + tig0023720:15564-15583 Msa1411050:intron 20.0%
!!! TTCAATATTTTAGTACTACA+AGG + tig0023720:15758-15777 Msa1411050:intron 20.0%
!!! TCAATATTTTAGTACTACAA+GGG + tig0023720:15759-15778 Msa1411050:intron 20.0%
!!! AAATATTTTTCCATTTCTAG+TGG + tig0023720:15977-15996 Msa1411050:intron 20.0%
!! AACTATGTATATTTGATTGT+TGG - tig0023720:16528-16547 None:intergenic 20.0%
!!! AACTTTTAGTTTCAAGTTAT+CGG - tig0023720:16558-16577 None:intergenic 20.0%
!!! CTTTTTATTGTCCAATTTTA+AGG + tig0023720:16703-16722 Msa1411050:intron 20.0%
!! TTGATTTCATTCCTTAAAAT+TGG - tig0023720:16717-16736 None:intergenic 20.0%
!!! TAATATCCGTTAATTTTCTT+TGG - tig0023720:16857-16876 None:intergenic 20.0%
!!! AAAATTAACGGATATTATGA+TGG + tig0023720:16860-16879 Msa1411050:intron 20.0%
!! ACATAATTCAGTGTAATTAT+AGG - tig0023720:17189-17208 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+TGG + tig0023720:17208-17227 Msa1411050:intron 20.0%
!! TAGTCATTGATGTTAAAATT+AGG + tig0023720:17345-17364 Msa1411050:intron 20.0%
!! TTGAATTTGATTAGAACATT+GGG - tig0023720:17500-17519 None:intergenic 20.0%
!!! GTTATTTTGTGAAATTCTAT+TGG + tig0023720:18036-18055 Msa1411050:intron 20.0%
!! ATAACATTACATATTCCAAT+TGG - tig0023720:18070-18089 None:intergenic 20.0%
!!! GATAAATTGATTTTCGAAAT+TGG - tig0023720:18128-18147 None:intergenic 20.0%
!! AATGAATGACAATTACTAAT+TGG - tig0023720:18543-18562 None:intergenic 20.0%
!!! CATAATTGGACCATATTTTT+TGG - tig0023720:14970-14989 None:intergenic 25.0%
! AAATAACAATTGTTGGAACT+TGG - tig0023720:15007-15026 None:intergenic 25.0%
! GAAGATGAAATAACAATTGT+TGG - tig0023720:15014-15033 None:intergenic 25.0%
!!! TCATTTTTTATGGTTCCAAA+GGG + tig0023720:15108-15127 Msa1411050:CDS 25.0%
!!! TTTTTTCCTCGTGTATTAAT+GGG + tig0023720:15596-15615 Msa1411050:intron 25.0%
! AGAAAATAGGGAAAAATAAG+AGG + tig0023720:15782-15801 Msa1411050:intron 25.0%
!!! TTTTTTAATAAGTAGGGTCA+AGG + tig0023720:15859-15878 Msa1411050:intron 25.0%
! GTTCTTAGAACACTATTATT+AGG + tig0023720:16249-16268 Msa1411050:intron 25.0%
!! AAAAGTACAATAACCAAACA+CGG - tig0023720:16444-16463 None:intergenic 25.0%
! ACTTGACTAATATCAAAGAA+CGG + tig0023720:16740-16759 Msa1411050:intron 25.0%
!! ATTCTTTTATTGTTAGTGTG+AGG + tig0023720:16802-16821 Msa1411050:intron 25.0%
!! TTTGTATTTTATCTGAGTCA+AGG - tig0023720:17294-17313 None:intergenic 25.0%
! TTTAACATCAATGACTAAAC+TGG - tig0023720:17342-17361 None:intergenic 25.0%
!!! TTAGGTTTTAAATGTTGACA+AGG + tig0023720:17363-17382 Msa1411050:intron 25.0%
!! CCAATTGTTTACTTTCATTT+TGG - tig0023720:17411-17430 None:intergenic 25.0%
! CCAAAATGAAAGTAAACAAT+TGG + tig0023720:17408-17427 Msa1411050:intron 25.0%
! ACTAAACTCATTACGTATTT+GGG - tig0023720:17444-17463 None:intergenic 25.0%
!!! ATTGGGTTTTAGATCTATTA+TGG - tig0023720:17483-17502 None:intergenic 25.0%
! GTTGAATTTGATTAGAACAT+TGG - tig0023720:17501-17520 None:intergenic 25.0%
!! ATTTTCGAAATTGGGAATAA+AGG - tig0023720:18119-18138 None:intergenic 25.0%
! AAAATTATGAGTGAGAATCT+GGG + tig0023720:18158-18177 Msa1411050:intron 25.0%
!!! TGGATATTTTTGCATAACTT+AGG - tig0023720:18523-18542 None:intergenic 25.0%
! ATTCATTTAACTCTTTGCTA+GGG + tig0023720:18556-18575 Msa1411050:intron 25.0%
! TGGTGGCTTTTTATGATTTA+TGG - tig0023720:14871-14890 None:intergenic 30.0%
ATAAATCATAAAAAGCCACC+AGG + tig0023720:14870-14889 Msa1411050:CDS 30.0%
!! TTTCCAATTATTGGTAGTGT+TGG - tig0023720:14900-14919 None:intergenic 30.0%
CAATCACTCTCCAAAAAATA+TGG + tig0023720:14957-14976 Msa1411050:CDS 30.0%
!!! CTCATTTTTTATGGTTCCAA+AGG + tig0023720:15107-15126 Msa1411050:CDS 30.0%
TTTCTGAATATGGTCCTTAT+TGG + tig0023720:15138-15157 Msa1411050:CDS 30.0%
GATTGTAGAGAATCTTATAG+AGG + tig0023720:15307-15326 Msa1411050:intron 30.0%
TGTATAAGATGATATTGGGT+AGG + tig0023720:15336-15355 Msa1411050:intron 30.0%
GTATAAGATGATATTGGGTA+GGG + tig0023720:15337-15356 Msa1411050:intron 30.0%
!! GCAATTTGATTTGAAGAAGT+TGG + tig0023720:15369-15388 Msa1411050:CDS 30.0%
! CGTATCTGTACATTTTTCAT+TGG + tig0023720:15538-15557 Msa1411050:intron 30.0%
!!! GTTTTTTCCTCGTGTATTAA+TGG + tig0023720:15595-15614 Msa1411050:intron 30.0%
! TTTTTCCTCGTGTATTAATG+GGG + tig0023720:15597-15616 Msa1411050:intron 30.0%
GAAAATTGAGATTAAACCAG+GGG - tig0023720:15624-15643 None:intergenic 30.0%
GGAAAATTGAGATTAAACCA+GGG - tig0023720:15625-15644 None:intergenic 30.0%
ACTGTCAACAATTGAAAAGA+GGG + tig0023720:15718-15737 Msa1411050:intron 30.0%
TTGAACAAGACAAAAACACT+AGG + tig0023720:15813-15832 Msa1411050:intron 30.0%
TGAACAAGACAAAAACACTA+GGG + tig0023720:15814-15833 Msa1411050:intron 30.0%
!!! TATTTTTCCATTTCTAGTGG+AGG + tig0023720:15980-15999 Msa1411050:intron 30.0%
!! ACAATATGCTCTAAGAGAAT+TGG + tig0023720:16114-16133 Msa1411050:intron 30.0%
CTAAGGCTAAAATCGATAAA+TGG - tig0023720:16602-16621 None:intergenic 30.0%
AGAAATCAATCTGCTTACTA+AGG - tig0023720:16619-16638 None:intergenic 30.0%
AGAACGGATATTATCAAAGA+AGG + tig0023720:16756-16775 Msa1411050:intron 30.0%
TGTGAGCCAAAGAAAATTAA+CGG + tig0023720:16848-16867 Msa1411050:intron 30.0%
TTCAGTGTAATTATAGGTGT+CGG - tig0023720:17183-17202 None:intergenic 30.0%
CTAAACTCATTACGTATTTG+GGG - tig0023720:17443-17462 None:intergenic 30.0%
CACTAAACTCATTACGTATT+TGG - tig0023720:17445-17464 None:intergenic 30.0%
! ATTTTTCTGTATCGCTGTAT+CGG - tig0023720:17557-17576 None:intergenic 30.0%
AATTTGCAAAATTCCCGATA+CGG + tig0023720:17574-17593 Msa1411050:intron 30.0%
AATAAATTACCGATACGTGT+CGG - tig0023720:17861-17880 None:intergenic 30.0%
! CAGATTCTCACTCATAATTT+TGG - tig0023720:18159-18178 None:intergenic 30.0%
CAAAATTATGAGTGAGAATC+TGG + tig0023720:18157-18176 Msa1411050:intron 30.0%
! CTTTGCTTTATTGTTCTCTT+TGG - tig0023720:18257-18276 None:intergenic 30.0%
CAAAGAGAACAATAAAGCAA+AGG + tig0023720:18255-18274 Msa1411050:intron 30.0%
AGGCGAACAATTAAAAAATG+AGG - tig0023720:18503-18522 None:intergenic 30.0%
CATTCATTTAACTCTTTGCT+AGG + tig0023720:18555-18574 Msa1411050:intron 30.0%
AGGTGAAGGTTTCCAATTAT+TGG - tig0023720:14909-14928 None:intergenic 35.0%
! AGTGATTGAAGTGTTCTATG+TGG - tig0023720:14945-14964 None:intergenic 35.0%
CCAAGTTGTAAGGACATAAT+TGG - tig0023720:14984-15003 None:intergenic 35.0%
CCAATTATGTCCTTACAACT+TGG + tig0023720:14981-15000 Msa1411050:CDS 35.0%
! ATGACATCCATTTTGCAAGT+CGG + tig0023720:15063-15082 Msa1411050:CDS 35.0%
!!! GCATCTCAGCTCATTTTTTA+TGG + tig0023720:15098-15117 Msa1411050:CDS 35.0%
! TTTTTATGGTTCCAAAGGGT+TGG + tig0023720:15112-15131 Msa1411050:CDS 35.0%
TTCTTTACACTACGCCAATA+AGG - tig0023720:15155-15174 None:intergenic 35.0%
GCTTCAAAAGTTGAGATGTT+TGG + tig0023720:15200-15219 Msa1411050:CDS 35.0%
TTGAGATGTTTGGTCCTATT+AGG + tig0023720:15210-15229 Msa1411050:CDS 35.0%
!!! GGATGTTTTGGTTAAGTCAT+TGG + tig0023720:15244-15263 Msa1411050:CDS 35.0%
! TTGAAGAAGTTGGTTCAAGA+AGG + tig0023720:15379-15398 Msa1411050:CDS 35.0%
! TATGCTTGGAGCTTTTAATC+CGG + tig0023720:15408-15427 Msa1411050:CDS 35.0%
CACATACCTGAAGATCAAAA+GGG - tig0023720:15456-15475 None:intergenic 35.0%
! CTTTTGATCTTCAGGTATGT+GGG + tig0023720:15455-15474 Msa1411050:intron 35.0%
TACACGAGGAAAAAACATGA+AGG - tig0023720:15591-15610 None:intergenic 35.0%
GGGAAAATTGAGATTAAACC+AGG - tig0023720:15626-15645 None:intergenic 35.0%
GACTGTCAACAATTGAAAAG+AGG + tig0023720:15717-15736 Msa1411050:intron 35.0%
CTGTCAACAATTGAAAAGAG+GGG + tig0023720:15719-15738 Msa1411050:intron 35.0%
AGTACTACAAGGGAGAAAAT+AGG + tig0023720:15769-15788 Msa1411050:intron 35.0%
GTACTACAAGGGAGAAAATA+GGG + tig0023720:15770-15789 Msa1411050:intron 35.0%
AGTGTGAGGATCTCTTTAAT+AGG + tig0023720:16816-16835 Msa1411050:intron 35.0%
TGGTAATTTAGAGAGCAAGA+TGG - tig0023720:17075-17094 None:intergenic 35.0%
!! TATGAAGTATTGTCACTCCT+CGG + tig0023720:17111-17130 Msa1411050:intron 35.0%
GAGTTATAACCTATGAAGCA+CGG - tig0023720:17263-17282 None:intergenic 35.0%
ACATCAATGACTAAACTGGT+TGG - tig0023720:17338-17357 None:intergenic 35.0%
CTACCTATCGAATGAAGTAT+CGG + tig0023720:17798-17817 Msa1411050:intron 35.0%
AAACCGATACTTCATTCGAT+AGG - tig0023720:17804-17823 None:intergenic 35.0%
! ATCGGTTTATTTAGCCGTAT+CGG + tig0023720:17816-17835 Msa1411050:intron 35.0%
! TATCAGTATCGGATACATGT+CGG + tig0023720:17946-17965 Msa1411050:intron 35.0%
! ACTCTAAAAATGGCGAAGAA+TGG - tig0023720:17975-17994 None:intergenic 35.0%
!!! CTTCGCCATTTTTAGAGTAT+CGG + tig0023720:17977-17996 Msa1411050:intron 35.0%
! AAGCTCCGATACTCTAAAAA+TGG - tig0023720:17985-18004 None:intergenic 35.0%
TTCAAAGAACTCAGACATCT+TGG + tig0023720:18003-18022 Msa1411050:intron 35.0%
! CTATTGGTTATACTGCCAAT+TGG + tig0023720:18052-18071 Msa1411050:intron 35.0%
AGAGAACAATAAAGCAAAGG+AGG + tig0023720:18258-18277 Msa1411050:intron 35.0%
GAGAACAATAAAGCAAAGGA+GGG + tig0023720:18259-18278 Msa1411050:intron 35.0%
CGACTAAAATGAAAGTCTGA+CGG - tig0023720:18315-18334 None:intergenic 35.0%
TGCAATGACAGTGAACAAAA+TGG + tig0023720:18471-18490 Msa1411050:intron 35.0%
! TAAAGCACTTGATGAGGTAT+TGG + tig0023720:18606-18625 Msa1411050:CDS 35.0%
GGTATGTGAAAGTGAAGAGA+AGG - tig0023720:14812-14831 None:intergenic 40.0%
!! CCAATTATTGGTAGTGTTGG+TGG - tig0023720:14897-14916 None:intergenic 40.0%
CCACCAACACTACCAATAAT+TGG + tig0023720:14894-14913 Msa1411050:CDS 40.0%
ATTGGAAACCTTCACCTACT+AGG + tig0023720:14912-14931 Msa1411050:CDS 40.0%
TATGTGGAAGTTTGCCTAGT+AGG - tig0023720:14929-14948 None:intergenic 40.0%
! AATGGATGTCATGCGTTTTG+AGG - tig0023720:15055-15074 None:intergenic 40.0%
TTCAGAAAAAGCCAACCCTT+TGG - tig0023720:15126-15145 None:intergenic 40.0%
!!! GGGTTGGCTTTTTCTGAATA+TGG + tig0023720:15128-15147 Msa1411050:CDS 40.0%
GTTTGGTCCTATTAGGAAGA+AGG + tig0023720:15217-15236 Msa1411050:CDS 40.0%
TCCTATTAGGAAGAAGGAGT+TGG + tig0023720:15223-15242 Msa1411050:CDS 40.0%
TCCAACTCCTTCTTCCTAAT+AGG - tig0023720:15227-15246 None:intergenic 40.0%
! GAAGAAGGAGTTGGATGTTT+TGG + tig0023720:15232-15251 Msa1411050:CDS 40.0%
GTCATTGGAGAAAGTTGCTT+TGG + tig0023720:15259-15278 Msa1411050:CDS 40.0%
! TTGGAGAAAGTTGCTTTGGT+AGG + tig0023720:15263-15282 Msa1411050:intron 40.0%
! GAAGTTGGTTCAAGAAGGAA+TGG + tig0023720:15384-15403 Msa1411050:CDS 40.0%
ATCCGGCTGATTATGTTTCT+TGG + tig0023720:15425-15444 Msa1411050:CDS 40.0%
AGCCAAGAAACATAATCAGC+CGG - tig0023720:15430-15449 None:intergenic 40.0%
GCTGATTATGTTTCTTGGCT+AGG + tig0023720:15430-15449 Msa1411050:CDS 40.0%
CCACATACCTGAAGATCAAA+AGG - tig0023720:15457-15476 None:intergenic 40.0%
! CCTTTTGATCTTCAGGTATG+TGG + tig0023720:15454-15473 Msa1411050:intron 40.0%
AACTCTACGATTGATGCTCA+TGG - tig0023720:16034-16053 None:intergenic 40.0%
ATAAACAAGTGCGAGCAATG+AGG + tig0023720:16388-16407 Msa1411050:intron 40.0%
AACCAAACACGGATTCAATG+CGG - tig0023720:16433-16452 None:intergenic 40.0%
CATAGGTTGTGACAAAGAGA+TGG - tig0023720:17095-17114 None:intergenic 40.0%
GAGGAGTGACAATACTTCAT+AGG - tig0023720:17112-17131 None:intergenic 40.0%
GATTAGGTGTGTTATGGTGT+CGG + tig0023720:17133-17152 Msa1411050:intron 40.0%
!! TTACTTTCATTTTGGTCCCC+AGG - tig0023720:17403-17422 None:intergenic 40.0%
ATCGGTATCGTATCAGGTAT+CGG - tig0023720:17539-17558 None:intergenic 40.0%
TCGGTTTATTTAGCCGTATC+GGG + tig0023720:17817-17836 Msa1411050:intron 40.0%
! TACGCGTATCAGAGAAGTAT+CGG - tig0023720:17908-17927 None:intergenic 40.0%
TACTTCTCTGATACGCGTAT+CGG + tig0023720:17909-17928 Msa1411050:intron 40.0%
! CGATTTTGCTTCCTTGTTAG+AGG - tig0023720:18199-18218 None:intergenic 40.0%
TTGACTGTTAGATGCTGACA+AGG - tig0023720:18357-18376 None:intergenic 40.0%
AGCACTAAACTGACTAACCA+AGG + tig0023720:18388-18407 Msa1411050:intron 40.0%
ACTCACGCTAAAAGGCAAAA+CGG - tig0023720:18428-18447 None:intergenic 40.0%
TACCTCATCAAGTGCTTTAC+CGG - tig0023720:18605-18624 None:intergenic 40.0%
TGTAGACAAAGTTCGTCATC+AGG + tig0023720:18663-18682 Msa1411050:CDS 40.0%
GTAGACAAAGTTCGTCATCA+GGG + tig0023720:18664-18683 Msa1411050:CDS 40.0%
GAAGTTTGCCTAGTAGGTGA+AGG - tig0023720:14923-14942 None:intergenic 45.0%
TGGAACTTGGCCAAGTTGTA+AGG - tig0023720:14994-15013 None:intergenic 45.0%
AGCTGAGATGCTTGAGTCTT+CGG - tig0023720:15089-15108 None:intergenic 45.0%
! GAAAGTTGCTTTGGTAGGTG+AGG + tig0023720:15268-15287 Msa1411050:intron 45.0%
CAAGAAGGAATGGCTATGCT+TGG + tig0023720:15394-15413 Msa1411050:CDS 45.0%
GGCTATACCTCCACTAGAAA+TGG - tig0023720:15990-16009 None:intergenic 45.0%
ACCAAACACGGATTCAATGC+GGG - tig0023720:16432-16451 None:intergenic 45.0%
GTATTGTCACTCCTCGGATT+AGG + tig0023720:17117-17136 Msa1411050:intron 45.0%
! TCCTCGGATTAGGTGTGTTA+TGG + tig0023720:17127-17146 Msa1411050:intron 45.0%
ACCATAACACACCTAATCCG+AGG - tig0023720:17131-17150 None:intergenic 45.0%
TGTCTGTATCCGTGCTTCAT+AGG + tig0023720:17251-17270 Msa1411050:intron 45.0%
GTTGACAAGGATACGTGACA+TGG + tig0023720:17376-17395 Msa1411050:intron 45.0%
TCGGTATCGTATCAGGTATC+GGG - tig0023720:17538-17557 None:intergenic 45.0%
TAAACGTATCCCAGCCGTAT+CGG - tig0023720:17591-17610 None:intergenic 45.0%
CGGTTTATTTAGCCGTATCG+GGG + tig0023720:17818-17837 Msa1411050:intron 45.0%
GGTTTATTTAGCCGTATCGG+GGG + tig0023720:17819-17838 Msa1411050:intron 45.0%
GCTAACTTATACCCCCGATA+CGG - tig0023720:17833-17852 None:intergenic 45.0%
TTACCGATACGTGTCGGATA+CGG - tig0023720:17855-17874 None:intergenic 45.0%
!! ACGCGTATCAGAGAAGTATC+GGG - tig0023720:17907-17926 None:intergenic 45.0%
ACTTCTCTGATACGCGTATC+GGG + tig0023720:17910-17929 Msa1411050:intron 45.0%
ATACGCGTATCGGGACATAT+CGG + tig0023720:17919-17938 Msa1411050:intron 45.0%
ATATCGGGGCGTATCAGTAT+CGG + tig0023720:17935-17954 Msa1411050:intron 45.0%
TATGAGTGAGAATCTGGGTG+TGG + tig0023720:18163-18182 Msa1411050:intron 45.0%
AGAATCTGGGTGTGGAATGT+AGG + tig0023720:18171-18190 Msa1411050:intron 45.0%
GAATCTGGGTGTGGAATGTA+GGG + tig0023720:18172-18191 Msa1411050:intron 45.0%
GAATGTAGGGTCCTCTAACA+AGG + tig0023720:18185-18204 Msa1411050:intron 45.0%
! TTGCCTTTTAGCGTGAGTCA+AGG + tig0023720:18430-18449 Msa1411050:intron 45.0%
AGTCCTTGACTCACGCTAAA+AGG - tig0023720:18436-18455 None:intergenic 45.0%
ACACGAACCTGCAAGAAAAC+CGG + tig0023720:18583-18602 Msa1411050:CDS 45.0%
!!! TGCTTTACCGGTTTTCTTGC+AGG - tig0023720:18593-18612 None:intergenic 45.0%
! AACCGGTAAAGCACTTGATG+AGG + tig0023720:18600-18619 Msa1411050:CDS 45.0%
!!! ATAAATTTTTTTAATAAGTA+GGG + tig0023720:15853-15872 Msa1411050:intron 5.0%
!!! AATTTTCATATTTTTTAATA+AGG + tig0023720:17043-17062 Msa1411050:intron 5.0%
!! ATTGGTAGTGTTGGTGGACC+TGG - tig0023720:14891-14910 None:intergenic 50.0%
!! TCTTCGGCCGACTTGCAAAA+TGG - tig0023720:15073-15092 None:intergenic 50.0%
! GCTAGGCCCTTTTGATCTTC+AGG + tig0023720:15447-15466 Msa1411050:CDS 50.0%
ACAAGTGCGAGCAATGAGGT+CGG + tig0023720:16392-16411 Msa1411050:intron 50.0%
CAAACACGGATTCAATGCGG+GGG - tig0023720:16430-16449 None:intergenic 50.0%
CCAAACACGGATTCAATGCG+GGG - tig0023720:16431-16450 None:intergenic 50.0%
AAGGATACGTGACATGGACC+TGG + tig0023720:17382-17401 Msa1411050:intron 50.0%
AGGATACGTGACATGGACCT+GGG + tig0023720:17383-17402 Msa1411050:intron 50.0%
! CGGTATCGTATCAGGTATCG+GGG - tig0023720:17537-17556 None:intergenic 50.0%
! CGCTGTATCGGTATCGTATC+AGG - tig0023720:17545-17564 None:intergenic 50.0%
TGCAAAATTCCCGATACGGC+TGG + tig0023720:17578-17597 Msa1411050:intron 50.0%
GCAAAATTCCCGATACGGCT+GGG + tig0023720:17579-17598 Msa1411050:intron 50.0%
AAACGTATCCCAGCCGTATC+GGG - tig0023720:17590-17609 None:intergenic 50.0%
TAGCCGTATCCGACACGTAT+CGG + tig0023720:17849-17868 Msa1411050:intron 50.0%
TACGCGTATCGGGACATATC+GGG + tig0023720:17920-17939 Msa1411050:intron 50.0%
CAAGGACTATTGTGACAGCG+AGG + tig0023720:18448-18467 Msa1411050:intron 50.0%
GGGGACCCCATTAATACACG+AGG - tig0023720:15605-15624 None:intergenic 55.0%
CGTGTATTAATGGGGTCCCC+TGG + tig0023720:15605-15624 Msa1411050:intron 55.0%
CAAGTGCGAGCAATGAGGTC+GGG + tig0023720:16393-16412 Msa1411050:intron 55.0%
GATTCAATGCGGGGGCAATG+GGG - tig0023720:16422-16441 None:intergenic 55.0%
GGATTCAATGCGGGGGCAAT+GGG - tig0023720:16423-16442 None:intergenic 55.0%
CCCCGCATTGAATCCGTGTT+TGG + tig0023720:16428-16447 Msa1411050:intron 55.0%
GGATACGTGACATGGACCTG+GGG + tig0023720:17384-17403 Msa1411050:intron 55.0%
ACGCGTATCGGGACATATCG+GGG + tig0023720:17921-17940 Msa1411050:intron 55.0%
CGGTCGCTGAATGTGTACCT+TGG - tig0023720:18408-18427 None:intergenic 55.0%
!! GGTAGTGTTGGTGGACCTGG+TGG - tig0023720:14888-14907 None:intergenic 60.0%
CGGATTCAATGCGGGGGCAA+TGG - tig0023720:16424-16443 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0023720 gene 14777 18699 14777 ID=Msa1411050;Name=Msa1411050
tig0023720 mRNA 14777 18699 14777 ID=Msa1411050-mRNA-1;Parent=Msa1411050;Name=Msa1411050-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|3|0|245
tig0023720 exon 14777 15280 14777 ID=Msa1411050-mRNA-1:exon:19897;Parent=Msa1411050-mRNA-1
tig0023720 exon 15358 15468 15358 ID=Msa1411050-mRNA-1:exon:19898;Parent=Msa1411050-mRNA-1
tig0023720 exon 18577 18699 18577 ID=Msa1411050-mRNA-1:exon:19899;Parent=Msa1411050-mRNA-1
tig0023720 CDS 14777 15280 14777 ID=Msa1411050-mRNA-1:cds;Parent=Msa1411050-mRNA-1
tig0023720 CDS 15358 15468 15358 ID=Msa1411050-mRNA-1:cds;Parent=Msa1411050-mRNA-1
tig0023720 CDS 18577 18699 18577 ID=Msa1411050-mRNA-1:cds;Parent=Msa1411050-mRNA-1
Gene Sequence

>Msa1411050

ATGTCTTCTACAACAATCATAATAATTTCTTTCCTTCTCTTCACTTTCACATACCTTTTATTCAAATTCTTCTTACGTGCAAAACAAAACACCATAAATCATAAAAAGCCACCAGGTCCACCAACACTACCAATAATTGGAAACCTTCACCTACTAGGCAAACTTCCACATAGAACACTTCAATCACTCTCCAAAAAATATGGTCCAATTATGTCCTTACAACTTGGCCAAGTTCCAACAATTGTTATTTCATCTTCAAAAGCTGCAGAATCATTCCTCAAAACGCATGACATCCATTTTGCAAGTCGGCCGAAGACTCAAGCATCTCAGCTCATTTTTTATGGTTCCAAAGGGTTGGCTTTTTCTGAATATGGTCCTTATTGGCGTAGTGTAAAGAAACTGTGCACTTTGAAACTTTTAAGTGCTTCAAAAGTTGAGATGTTTGGTCCTATTAGGAAGAAGGAGTTGGATGTTTTGGTTAAGTCATTGGAGAAAGTTGCTTTGGGTAAGTATGAGCAATTTGATTTGAAGAAGTTGGTTCAAGAAGGAATGGCTATGCTTGGAGCTTTTAATCCGGCTGATTATGTTTCTTGGCTAGGCCCTTTTGATCTTCAGGGATTTACACGAACCTGCAAGAAAACCGGTAAAGCACTTGATGAGGTATTGGAGATGATAATAAGAGAGCATGAACAAAGCACTAATGTAGACAAAGTTCGTCATCAGGGCCGTCTCCGATAA
Protein sequence

>Msa1411050

MSSTTIIIISFLLFTFTYLLFKFFLRAKQNTINHKKPPGPPTLPIIGNLHLLGKLPHRTLQSLSKKYGPIMSLQLGQVPTIVISSSKAAESFLKTHDIHFASRPKTQASQLIFYGSKGLAFSEYGPYWRSVKKLCTLKLLSASKVEMFGPIRKKELDVLVKSLEKVALGKYEQFDLKKLVQEGMAMLGAFNPADYVSWLGPFDLQGFTRTCKKTGKALDEVLEMIIREHEQSTNVDKVRHQGRLR*