AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1428240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428240 MtrunA17_Chr1g0211271 97.470 751 14 2 1 749 1 748 0.0 1515
Msa1428240 MtrunA17_Chr3g0118401 28.752 713 369 21 1 606 1 681 2.31e-65 231
Msa1428240 MtrunA17_Chr4g0072011 28.430 707 361 21 1 607 1 662 3.15e-64 228
Msa1428240 MtrunA17_Chr5g0405741 27.778 468 308 7 272 733 204 647 1.34e-53 196
Msa1428240 MtrunA17_Chr5g0440551 35.165 364 202 6 272 608 311 667 1.62e-53 198
Msa1428240 MtrunA17_Chr8g0335341 26.162 753 462 22 1 707 1 705 1.94e-49 185
Msa1428240 MtrunA17_Chr3g0124841 27.742 465 306 9 268 717 450 899 1.63e-47 181
Msa1428240 MtrunA17_Chr3g0139411 25.308 569 391 13 159 721 164 704 1.19e-44 171
Msa1428240 MtrunA17_Chr7g0250681 27.426 474 304 10 246 707 380 825 6.14e-43 167
Msa1428240 MtrunA17_Chr2g0298171 36.111 288 169 4 274 550 534 817 7.67e-43 167
Msa1428240 MtrunA17_Chr5g0448571 28.137 526 328 14 173 671 237 739 4.87e-42 164
Msa1428240 MtrunA17_Chr2g0331821 27.293 458 300 11 274 723 322 754 7.73e-42 163
Msa1428240 MtrunA17_Chr3g0130761 26.761 568 362 13 173 717 238 774 1.78e-37 150
Msa1428240 MtrunA17_Chr4g0004471 26.201 458 290 13 273 717 124 546 6.01e-35 140
Msa1428240 MtrunA17_Chr2g0303521 25.561 446 300 7 271 712 207 624 2.39e-32 133
Msa1428240 MtrunA17_Chr8g0382551 28.482 481 241 18 1 422 1 437 4.19e-28 118
Msa1428240 MtrunA17_Chr8g0382541 30.178 169 114 2 448 616 1 165 3.60e-19 87.4
Msa1428240 MtrunA17_Chr1g0208081 49.412 85 43 0 364 448 1 85 9.48e-18 79.7
Msa1428240 MtrunA17_Chr4g0052471 28.061 196 131 5 276 468 8 196 6.71e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428240 AT4G30130.3 31.791 670 365 21 1 607 1 641 3.41e-64 228
Msa1428240 AT4G30130.1 31.791 670 365 21 1 607 1 641 3.41e-64 228
Msa1428240 AT2G27090.2 27.046 721 380 20 1 621 1 675 1.69e-58 212
Msa1428240 AT2G27090.1 27.046 721 380 20 1 621 1 675 1.69e-58 212
Msa1428240 AT3G51290.3 30.169 474 283 9 271 730 199 638 4.31e-58 209
Msa1428240 AT1G21740.1 29.724 508 328 7 222 717 451 941 1.51e-57 212
Msa1428240 AT3G51290.2 29.959 484 291 9 271 740 199 648 3.03e-57 209
Msa1428240 AT3G51290.1 29.747 474 279 10 271 730 199 632 2.76e-54 198
Msa1428240 AT1G02110.1 26.471 748 446 17 1 707 1 685 3.80e-54 199
Msa1428240 AT4G39790.1 36.212 359 194 7 271 600 250 602 2.55e-53 196
Msa1428240 AT2G19090.1 35.013 397 222 8 274 656 387 761 1.45e-52 196
Msa1428240 AT1G77500.1 28.899 436 286 5 272 707 449 860 5.13e-50 189
Msa1428240 AT4G35240.2 26.504 615 327 18 169 718 274 828 2.23e-46 178
Msa1428240 AT4G35240.1 26.504 615 327 18 169 718 274 828 2.23e-46 178
Msa1428240 AT4G35240.4 26.504 615 327 18 169 718 274 828 3.42e-46 177
Msa1428240 AT4G35240.3 26.504 615 327 18 169 718 274 828 3.42e-46 177
Msa1428240 AT4G30130.4 33.074 514 280 17 1 467 1 497 1.54e-45 171
Msa1428240 AT4G30130.2 33.074 514 280 17 1 467 1 497 1.54e-45 171
Msa1428240 AT3G60320.1 27.565 497 298 11 236 707 319 778 8.50e-41 160
Msa1428240 AT2G17110.1 29.448 489 297 9 169 623 179 653 1.54e-39 156
Msa1428240 AT1G52320.2 24.038 520 350 9 208 722 302 781 2.94e-38 153
Msa1428240 AT1G52320.5 24.038 520 350 9 208 722 302 781 2.94e-38 153
Msa1428240 AT1G52320.1 24.038 520 350 9 208 722 279 758 3.32e-38 152
Msa1428240 AT1G52320.3 24.204 471 326 7 257 722 11 455 2.35e-36 143
Msa1428240 AT1G52320.4 24.204 471 326 7 257 722 11 455 2.35e-36 143
Msa1428240 AT1G20530.1 25.556 630 388 16 1 624 1 555 4.04e-32 133
Msa1428240 AT5G54480.1 27.528 356 217 8 371 721 400 719 1.69e-29 125
Msa1428240 AT2G34670.2 23.408 581 375 15 158 707 123 664 4.83e-28 120
Msa1428240 AT2G34670.1 23.769 467 286 15 158 594 123 549 3.77e-17 85.9

Find 160 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCACCACAGAGAGATTT+TGG 0.150155 tig0026321:-61058 Msa1428240:CDS
AATGATCTATTTGATGATTA+TGG 0.221454 tig0026321:-59785 Msa1428240:CDS
ACATTGAATGGATTGCAATT+TGG 0.234471 tig0026321:-58515 Msa1428240:CDS
CATTGAATGGATTGCAATTT+GGG 0.250004 tig0026321:-58514 Msa1428240:CDS
TCGAGTAAAATTCAACTTCA+TGG 0.282119 tig0026321:+58951 None:intergenic
TGGTTTCTGATGGTGTTTGC+TGG 0.291077 tig0026321:+61266 None:intergenic
TGTTATTGCATTAATGAGTT+TGG 0.311748 tig0026321:+59895 None:intergenic
CCTTATAACTTTCCCTCCTA+AGG 0.316405 tig0026321:-61350 Msa1428240:CDS
AATTCCCCTTCATTCTAGTT+TGG 0.322897 tig0026321:-60642 Msa1428240:CDS
GAAATTGTTTGAGGAGGTTA+AGG 0.331317 tig0026321:-59705 Msa1428240:intron
ATATCGAGGACCATTTCATT+AGG 0.339597 tig0026321:-60712 Msa1428240:CDS
TTCATTAGGGCTTATGAGTC+TGG 0.342761 tig0026321:-60698 Msa1428240:CDS
TTGAGAAATAAGAATGTTAG+AGG 0.343032 tig0026321:-59452 Msa1428240:CDS
GTGAGTGTTACCGTCTTATC+AGG 0.343110 tig0026321:+58833 None:intergenic
CCTTAGGAGGGAAAGTTATA+AGG 0.348068 tig0026321:+61350 None:intergenic
GATTATGGAGGAATGGATTC+GGG 0.351284 tig0026321:-59770 Msa1428240:CDS
TGAAAGATGTGAAAGCTCTT+TGG 0.355631 tig0026321:-58796 Msa1428240:CDS
GTTGCTTGTGACTCATGTAT+TGG 0.370767 tig0026321:-61232 Msa1428240:CDS
TTCAATAGTTCAACAATTTG+AGG 0.371023 tig0026321:+59299 None:intergenic
TATCGAGGACCATTTCATTA+GGG 0.384897 tig0026321:-60711 Msa1428240:CDS
CTCTGTGGTGAAGGCATTGA+AGG 0.387609 tig0026321:+61067 None:intergenic
TGATTATGGAGGAATGGATT+CGG 0.388164 tig0026321:-59771 Msa1428240:CDS
TCATGAAGAAGAATGCTTAA+TGG 0.393194 tig0026321:-58627 Msa1428240:CDS
TCCACTTCCTCCTCTAACTC+TGG 0.397576 tig0026321:+60929 None:intergenic
CCAATGTCATTTCAAGTCAA+TGG 0.399768 tig0026321:-58908 Msa1428240:CDS
AGGGCAGTGAGGGAGGAAGA+AGG 0.402646 tig0026321:-60956 Msa1428240:CDS
GGGCAGTGAGGGAGGAAGAA+GGG 0.421828 tig0026321:-60955 Msa1428240:CDS
TATGAAGGATTCTTCAAGTT+GGG 0.435429 tig0026321:-59819 Msa1428240:CDS
CTCAGAGTCTTCTGAGGAAG+AGG 0.436803 tig0026321:-61200 Msa1428240:CDS
CTCAGAAGACTCTGAGGTTG+TGG 0.437092 tig0026321:+61207 None:intergenic
TCCAGAGTTAGAGGAGGAAG+TGG 0.438913 tig0026321:-60930 Msa1428240:CDS
AATGGATAAAAGTGATTACT+TGG 0.441015 tig0026321:-58609 Msa1428240:CDS
TCCCCTTCATTCTAGTTTGG+AGG 0.441439 tig0026321:-60639 Msa1428240:CDS
GTTAGAGGAGGAAGTGGAAA+GGG 0.441445 tig0026321:-60924 Msa1428240:CDS
GGAGAAAGGTCAAGACCCTT+AGG 0.446422 tig0026321:+61334 None:intergenic
AGAAGGGATTCCAGAGTTAG+AGG 0.450891 tig0026321:-60939 Msa1428240:CDS
TCTATTAGCCTCAAGCATCT+TGG 0.450939 tig0026321:+60664 None:intergenic
ATGTGGCTAATGAAAATGTT+GGG 0.452073 tig0026321:-60802 Msa1428240:CDS
AGCAACTCTCTCCCTTCTGC+AGG 0.453953 tig0026321:+60749 None:intergenic
CATGGAAGTCCATGTCATCT+AGG 0.456422 tig0026321:-59874 Msa1428240:CDS
GCAATCATCATGCAAGAGTC+TGG 0.456649 tig0026321:-59852 Msa1428240:CDS
AAGAATAATAAAGAAGGTGG+AGG 0.464612 tig0026321:-60863 Msa1428240:CDS
TCTGGCCTCATACTGTCAAA+AGG 0.466622 tig0026321:+61019 None:intergenic
AGTGAAAATAGTGAGAAAGC+TGG 0.468649 tig0026321:-58416 Msa1428240:CDS
TTGCAATCAATCTCGTGGAT+TGG 0.469345 tig0026321:-59089 Msa1428240:CDS
AAGGGTAGAACTTGAGCATA+AGG 0.470394 tig0026321:-60906 Msa1428240:CDS
ACTCATAAGCCCTAATGAAA+TGG 0.472464 tig0026321:+60702 None:intergenic
CTTATAACTTTCCCTCCTAA+GGG 0.473646 tig0026321:-61349 Msa1428240:CDS
TGATTGCAAAATTTATCGTA+CGG 0.475042 tig0026321:+59103 None:intergenic
CAATGTCATTTCAAGTCAAT+GGG 0.475276 tig0026321:-58907 Msa1428240:CDS
TTGAAGCCGAGCTTCATCAT+TGG 0.475679 tig0026321:-59054 Msa1428240:CDS
GGAAGTCATTTATTAACCTT+AGG 0.476815 tig0026321:-59749 Msa1428240:CDS
TTTCCTCCAAACTAGAATGA+AGG 0.477927 tig0026321:+60636 None:intergenic
GAGAAAACTTGAGGTAGAGA+AGG 0.480533 tig0026321:-58576 Msa1428240:CDS
CAAATTGTTGAACTATTGAA+AGG 0.480895 tig0026321:-59296 Msa1428240:CDS
AGATCTGTATGCTGGGATCT+TGG 0.483601 tig0026321:-59387 Msa1428240:CDS
ATTTGATGATTATGGAGGAA+TGG 0.485602 tig0026321:-59777 Msa1428240:CDS
TAGGGCTTATGAGTCTGGTA+AGG 0.488409 tig0026321:-60693 Msa1428240:CDS
GATTTAGATAGAAGATATGA+TGG 0.488627 tig0026321:-58719 Msa1428240:CDS
TGATGCATAGGCATATTCAT+AGG 0.490912 tig0026321:+61106 None:intergenic
GAATTCAGATGATGATTTGA+GGG 0.492691 tig0026321:-60975 Msa1428240:CDS
TGATTTGAGGGCAGTGAGGG+AGG 0.493471 tig0026321:-60963 Msa1428240:CDS
GATATGAAAGATCTGTATGC+TGG 0.494737 tig0026321:-59395 Msa1428240:CDS
GATTGCAAAATTTATCGTAC+GGG 0.498032 tig0026321:+59104 None:intergenic
GAGAAGAATAATAAAGAAGG+TGG 0.501102 tig0026321:-60866 Msa1428240:CDS
ATGGGAAAAGAAATTGTTTG+AGG 0.502236 tig0026321:-59714 Msa1428240:CDS
ACACAGAGGATGACATTGAA+TGG 0.505166 tig0026321:-58527 Msa1428240:CDS
CTATTTGTAGAGAGAGAAAA+CGG 0.505888 tig0026321:-61504 Msa1428240:CDS
GTTATAAGGAAAGGTGAAGA+AGG 0.506368 tig0026321:+61364 None:intergenic
CCAAAATCTCTCTGTGGTGA+AGG 0.507180 tig0026321:+61058 None:intergenic
GATGAAGCTCGGCTTCAAGC+TGG 0.507445 tig0026321:+59059 None:intergenic
TACTCGTAATATGCAACGAT+TGG 0.509042 tig0026321:-58877 Msa1428240:CDS
TTCCTCCAAACTAGAATGAA+GGG 0.510602 tig0026321:+60637 None:intergenic
CCATGCATATAACCTTCCTA+AGG 0.511382 tig0026321:+59733 None:intergenic
AATCATCATCTGAATTCCTA+TGG 0.513102 tig0026321:+60981 None:intergenic
GGAATTCAGATGATGATTTG+AGG 0.513548 tig0026321:-60976 Msa1428240:CDS
CCTTAGGAAGGTTATATGCA+TGG 0.516989 tig0026321:-59733 Msa1428240:CDS
GAAGAGAAGAATAATAAAGA+AGG 0.518314 tig0026321:-60869 Msa1428240:CDS
GATGTGGCTAATGAAAATGT+TGG 0.520032 tig0026321:-60803 Msa1428240:CDS
TGGTAGCCATTCATAACCTC+TGG 0.520711 tig0026321:+61001 None:intergenic
CTGGCCTCATACTGTCAAAA+GGG 0.522430 tig0026321:+61020 None:intergenic
GTCATTTATTAACCTTAGGA+AGG 0.527369 tig0026321:-59745 Msa1428240:CDS
GAGGAAGAGGGAGAGAGAGA+AGG 0.528103 tig0026321:-61187 Msa1428240:CDS
TTGATGAATGAGAAGGAGAA+AGG 0.532755 tig0026321:+61320 None:intergenic
CGCACGCCAATGATGAAGCT+CGG 0.533254 tig0026321:+59048 None:intergenic
ACGTAGAAGCTCTGCATGGA+TGG 0.535242 tig0026321:-58991 Msa1428240:CDS
TGTTGAAACGGCGAAGGCTG+TGG 0.535339 tig0026321:-60825 Msa1428240:CDS
AAATTGTTGAACTATTGAAA+GGG 0.537939 tig0026321:-59295 Msa1428240:intron
GTGAAAATAGTGAGAAAGCT+GGG 0.538808 tig0026321:-58415 Msa1428240:CDS
ATTTCGTATATAGAAGATGA+TGG 0.539840 tig0026321:-58389 Msa1428240:CDS
TCGTTGCATATTACGAGTAA+TGG 0.540538 tig0026321:+58881 None:intergenic
GGAAAAGAAATTGTTTGAGG+AGG 0.545354 tig0026321:-59711 Msa1428240:CDS
ATATGAAGGATTCTTCAAGT+TGG 0.546672 tig0026321:-59820 Msa1428240:CDS
ACAAGCAACAGATTCATGCT+TGG 0.548945 tig0026321:+61246 None:intergenic
CTTAGGAAGGTTATATGCAT+GGG 0.550042 tig0026321:-59732 Msa1428240:CDS
GATCTATTTGATGATTATGG+AGG 0.551469 tig0026321:-59782 Msa1428240:CDS
TGATGATTTGAGGGCAGTGA+GGG 0.554612 tig0026321:-60966 Msa1428240:CDS
GAGGGAGAGAGAGAAGGTGA+AGG 0.559182 tig0026321:-61181 Msa1428240:CDS
GGTGTTTGCTGGAGAAACAT+AGG 0.559934 tig0026321:+61277 None:intergenic
GGAGGGAAAGTTATAAGGAA+AGG 0.561620 tig0026321:+61355 None:intergenic
GATTCATGCTTGGTTTCTGA+TGG 0.562846 tig0026321:+61256 None:intergenic
TCTGGTGGTTCAAAATATGA+AGG 0.565683 tig0026321:-59834 Msa1428240:CDS
CTTATCAGGCAACTTTCGTA+AGG 0.566150 tig0026321:+58847 None:intergenic
GAAGGATTCTTCAAGTTGGG+TGG 0.567665 tig0026321:-59816 Msa1428240:CDS
CCATTGACTTGAAATGACAT+TGG 0.571901 tig0026321:+58908 None:intergenic
GTGTTTGCTGGAGAAACATA+GGG 0.572296 tig0026321:+61278 None:intergenic
AGTTGTGAGTGGTGTTGAAA+CGG 0.573652 tig0026321:-60837 Msa1428240:CDS
GAAAGGTCAAGACCCTTAGG+AGG 0.573723 tig0026321:+61337 None:intergenic
ATATGAAAGATCTGTATGCT+GGG 0.574932 tig0026321:-59394 Msa1428240:CDS
AACGGCGAAGGCTGTGGATG+TGG 0.577941 tig0026321:-60819 Msa1428240:CDS
ATAAAGAGCAGCAACAGAAG+AGG 0.579662 tig0026321:-58763 Msa1428240:CDS
ACGAAAGTTGCCTGATAAGA+CGG 0.580833 tig0026321:-58843 Msa1428240:CDS
ATGAGGCCAGAGGTTATGAA+TGG 0.581936 tig0026321:-61007 Msa1428240:CDS
TCATAGATCAGAAGAAGAGT+CGG 0.585891 tig0026321:-58651 Msa1428240:CDS
AGGTTATGAATGGCTACCAT+AGG 0.586947 tig0026321:-60997 Msa1428240:CDS
TCAGAGTCTTCTGAGGAAGA+GGG 0.587884 tig0026321:-61199 Msa1428240:CDS
CTCTTCCTCAGAAGACTCTG+AGG 0.590681 tig0026321:+61201 None:intergenic
ACATGTGAAGTATTTGACTT+CGG 0.592384 tig0026321:+59129 None:intergenic
AGGAGATGATGAATTAAGCA+TGG 0.594438 tig0026321:-59432 Msa1428240:CDS
ACAATCGTGGAAAATCATGT+TGG 0.597219 tig0026321:-59182 Msa1428240:CDS
TCTAGTTTGGAGGAAATCAA+AGG 0.598376 tig0026321:-60629 Msa1428240:intron
AGAACTTGAGCATAAGGTGG+TGG 0.599202 tig0026321:-60900 Msa1428240:CDS
GTTCTTGATACACCTGCAGA+AGG 0.604152 tig0026321:-60761 Msa1428240:CDS
GGCATAGACATATGATGCAT+AGG 0.605861 tig0026321:+61094 None:intergenic
AGTTAGAGGAGGAAGTGGAA+AGG 0.607289 tig0026321:-60925 Msa1428240:CDS
AACTCATTAATGCAATAACA+TGG 0.609435 tig0026321:-59892 Msa1428240:CDS
AGAATAATAAAGAAGGTGGA+GGG 0.610927 tig0026321:-60862 Msa1428240:CDS
TGATGATTGCCTAGATGACA+TGG 0.612443 tig0026321:+59865 None:intergenic
GGTGAAGGCATTGAAGGTGG+TGG 0.616383 tig0026321:+61073 None:intergenic
AGGGCTTATGAGTCTGGTAA+GGG 0.622828 tig0026321:-60692 Msa1428240:CDS
TTCTTGATACACCTGCAGAA+GGG 0.629508 tig0026321:-60760 Msa1428240:CDS
TCCTCCAAACTAGAATGAAG+GGG 0.630374 tig0026321:+60638 None:intergenic
CACAACCTCAGAGTCTTCTG+AGG 0.635527 tig0026321:-61206 Msa1428240:CDS
GTGTGTTGCCTCAAAACTAG+AGG 0.637521 tig0026321:-61545 Msa1428240:CDS
TGAAGCTTTGAAAGATATCG+AGG 0.638509 tig0026321:-60726 Msa1428240:CDS
TGTGGTGAAGGCATTGAAGG+TGG 0.638795 tig0026321:+61070 None:intergenic
GACTTGAAATGACATTGGCA+TGG 0.641527 tig0026321:+58913 None:intergenic
TGCATGTAGAAATACTCACT+TGG 0.642692 tig0026321:+61133 None:intergenic
GACACTGAGGAGAAAACTTG+AGG 0.643003 tig0026321:-58585 Msa1428240:CDS
AGGGATTCCAGAGTTAGAGG+AGG 0.644039 tig0026321:-60936 Msa1428240:CDS
TGTGGCTAATGAAAATGTTG+GGG 0.649399 tig0026321:-60801 Msa1428240:CDS
ATTGCAAAATTTATCGTACG+GGG 0.653024 tig0026321:+59105 None:intergenic
ATGATGATTTGAGGGCAGTG+AGG 0.653507 tig0026321:-60967 Msa1428240:CDS
GCATACGTAGAAGCTCTGCA+TGG 0.662202 tig0026321:-58995 Msa1428240:CDS
ATCATCATGCAAGAGTCTGG+TGG 0.664887 tig0026321:-59849 Msa1428240:CDS
AATGCAGCTTAACACAATCG+TGG 0.665288 tig0026321:-59195 Msa1428240:intron
GGGTGTGACCAAGATGCTTG+AGG 0.666909 tig0026321:-60672 Msa1428240:CDS
AGAAGATGATGGTTGCAATG+TGG 0.668034 tig0026321:-58378 Msa1428240:CDS
GAGTGGTGTTGAAACGGCGA+AGG 0.672115 tig0026321:-60831 Msa1428240:CDS
GGTGGAGGGAAAGTTGTGAG+TGG 0.676621 tig0026321:-60848 Msa1428240:CDS
TTGCATATTACGAGTAATGG+CGG 0.677646 tig0026321:+58884 None:intergenic
AAAGGTCAAGACCCTTAGGA+GGG 0.680574 tig0026321:+61338 None:intergenic
TCCCAACCAAAATCTCTCTG+TGG 0.682232 tig0026321:+61052 None:intergenic
GGTAGAACTTGAGCATAAGG+TGG 0.683792 tig0026321:-60903 Msa1428240:CDS
CTTAGGCTGGAGATAGCACG+CGG 0.690858 tig0026321:-59502 Msa1428240:intron
TTGCAAAATTTATCGTACGG+GGG 0.706211 tig0026321:+59106 None:intergenic
GTGGCTAATGAAAATGTTGG+GGG 0.711834 tig0026321:-60800 Msa1428240:CDS
GTGATTACTTGGAGACACTG+AGG 0.718942 tig0026321:-58598 Msa1428240:CDS
TGGCTAATGAAAATGTTGGG+GGG 0.721992 tig0026321:-60799 Msa1428240:CDS
GTTGCATGCAAGAAACACAG+AGG 0.798241 tig0026321:-58541 Msa1428240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAGAAATTCATTCTAAA+AGG - tig0026321:60634-60653 Msa1428240:CDS 15.0%
!! TGATTTAATTGTAGTGAATA+AGG - tig0026321:59692-59711 Msa1428240:intron 20.0%
!!! AATGATCTATTTGATGATTA+TGG - tig0026321:60114-60133 Msa1428240:intron 20.0%
!! AAATTGTTGAACTATTGAAA+GGG - tig0026321:60604-60623 Msa1428240:intron 20.0%
! GAAGAGAAGAATAATAAAGA+AGG - tig0026321:59030-59049 Msa1428240:CDS 25.0%
! CAACATACTCAACTATAATT+AGG + tig0026321:59301-59320 None:intergenic 25.0%
! AATAAGTAATCATCATACCT+TGG + tig0026321:59361-59380 None:intergenic 25.0%
!! ATTTGGTTCATGTAATATGT+AGG - tig0026321:59480-59499 Msa1428240:CDS 25.0%
!! AAGTTGAATTAGCTTATGTA+AGG - tig0026321:59507-59526 Msa1428240:intron 25.0%
!! AGTTGAATTAGCTTATGTAA+GGG - tig0026321:59508-59527 Msa1428240:intron 25.0%
! TTCACTACAATTAAATCAAC+AGG + tig0026321:59690-59709 None:intergenic 25.0%
! TAGATTAAAACTCCTTAATC+TGG + tig0026321:59845-59864 None:intergenic 25.0%
!! AACTTTTAATCATGGATACA+TGG + tig0026321:59952-59971 None:intergenic 25.0%
!! ATGGTTCAAACTTTTAATCA+TGG + tig0026321:59960-59979 None:intergenic 25.0%
! TGTTATTGCATTAATGAGTT+TGG + tig0026321:60007-60026 None:intergenic 25.0%
! AACTCATTAATGCAATAACA+TGG - tig0026321:60007-60026 Msa1428240:intron 25.0%
! TTCGTCATAAACAGAAAATA+TGG + tig0026321:60253-60272 None:intergenic 25.0%
! AATGTTAGCAATATATGTCA+AGG + tig0026321:60362-60381 None:intergenic 25.0%
! TTGAGAAATAAGAATGTTAG+AGG - tig0026321:60447-60466 Msa1428240:intron 25.0%
! TTCAATAGTTCAACAATTTG+AGG + tig0026321:60603-60622 None:intergenic 25.0%
! CAAATTGTTGAACTATTGAA+AGG - tig0026321:60603-60622 Msa1428240:intron 25.0%
! TGATTGCAAAATTTATCGTA+CGG + tig0026321:60799-60818 None:intergenic 25.0%
! GATTTAGATAGAAGATATGA+TGG - tig0026321:61180-61199 Msa1428240:CDS 25.0%
! AATGGATAAAAGTGATTACT+TGG - tig0026321:61290-61309 Msa1428240:CDS 25.0%
! ATTTCGTATATAGAAGATGA+TGG - tig0026321:61510-61529 Msa1428240:CDS 25.0%
CTATTTGTAGAGAGAGAAAA+CGG - tig0026321:58395-58414 Msa1428240:CDS 30.0%
!!! TTTTCAGTTGATGAATGAGA+AGG + tig0026321:58589-58608 None:intergenic 30.0%
AATCATCATCTGAATTCCTA+TGG + tig0026321:58921-58940 None:intergenic 30.0%
GAATTCAGATGATGATTTGA+GGG - tig0026321:58924-58943 Msa1428240:CDS 30.0%
GAGAAGAATAATAAAGAAGG+TGG - tig0026321:59033-59052 Msa1428240:CDS 30.0%
AAGAATAATAAAGAAGGTGG+AGG - tig0026321:59036-59055 Msa1428240:CDS 30.0%
AGAATAATAAAGAAGGTGGA+GGG - tig0026321:59037-59056 Msa1428240:CDS 30.0%
ATGTGGCTAATGAAAATGTT+GGG - tig0026321:59097-59116 Msa1428240:CDS 30.0%
! TTCAACTTTTAACATGTCCA+AGG - tig0026321:59341-59360 Msa1428240:CDS 30.0%
ATTACCATTTACCAACACAT+TGG - tig0026321:59378-59397 Msa1428240:CDS 30.0%
ATTTAGTCATATTCCTGCAT+TGG - tig0026321:59432-59451 Msa1428240:CDS 30.0%
TTTAGTCATATTCCTGCATT+GGG - tig0026321:59433-59452 Msa1428240:CDS 30.0%
! AATGTGTCAACATTTTTGCA+TGG + tig0026321:59543-59562 None:intergenic 30.0%
GTTGACACATTTATTGATCA+TGG - tig0026321:59552-59571 Msa1428240:intron 30.0%
TGTCAGATCTCAAATCAATT+GGG - tig0026321:59576-59595 Msa1428240:intron 30.0%
TAACATGCACTAAATCAACT+CGG + tig0026321:59664-59683 None:intergenic 30.0%
TCTATGCTCTCAAATCAATA+GGG + tig0026321:59807-59826 None:intergenic 30.0%
ATATGAAGGATTCTTCAAGT+TGG - tig0026321:60079-60098 Msa1428240:intron 30.0%
! TATGAAGGATTCTTCAAGTT+GGG - tig0026321:60080-60099 Msa1428240:intron 30.0%
! GATCTATTTGATGATTATGG+AGG - tig0026321:60117-60136 Msa1428240:intron 30.0%
! ATTTGATGATTATGGAGGAA+TGG - tig0026321:60122-60141 Msa1428240:intron 30.0%
GGAAGTCATTTATTAACCTT+AGG - tig0026321:60150-60169 Msa1428240:intron 30.0%
GTCATTTATTAACCTTAGGA+AGG - tig0026321:60154-60173 Msa1428240:intron 30.0%
ATGGGAAAAGAAATTGTTTG+AGG - tig0026321:60185-60204 Msa1428240:intron 30.0%
AGAACAAAACAACAATGTGT+TGG - tig0026321:60305-60324 Msa1428240:intron 30.0%
ATATGTCAAGGAACAAAACA+AGG + tig0026321:60350-60369 None:intergenic 30.0%
ATATGAAAGATCTGTATGCT+GGG - tig0026321:60505-60524 Msa1428240:intron 30.0%
! ACATGTGAAGTATTTGACTT+CGG + tig0026321:60773-60792 None:intergenic 30.0%
ATTGCAAAATTTATCGTACG+GGG + tig0026321:60797-60816 None:intergenic 30.0%
GATTGCAAAATTTATCGTAC+GGG + tig0026321:60798-60817 None:intergenic 30.0%
! AAATTTTGCAATCAATCTCG+TGG - tig0026321:60805-60824 Msa1428240:CDS 30.0%
TCGAGTAAAATTCAACTTCA+TGG + tig0026321:60951-60970 None:intergenic 30.0%
! CAATGTCATTTCAAGTCAAT+GGG - tig0026321:60992-61011 Msa1428240:CDS 30.0%
TCATGAAGAAGAATGCTTAA+TGG - tig0026321:61272-61291 Msa1428240:CDS 30.0%
!! ACATTGAATGGATTGCAATT+TGG - tig0026321:61384-61403 Msa1428240:CDS 30.0%
!! CATTGAATGGATTGCAATTT+GGG - tig0026321:61385-61404 Msa1428240:CDS 30.0%
!!! TTCTTCTTCCTCTAGTTTTG+AGG + tig0026321:58365-58384 None:intergenic 35.0%
GTTATAAGGAAAGGTGAAGA+AGG + tig0026321:58538-58557 None:intergenic 35.0%
CTTATAACTTTCCCTCCTAA+GGG - tig0026321:58550-58569 Msa1428240:CDS 35.0%
TTGATGAATGAGAAGGAGAA+AGG + tig0026321:58582-58601 None:intergenic 35.0%
TGCATGTAGAAATACTCACT+TGG + tig0026321:58769-58788 None:intergenic 35.0%
TGATGCATAGGCATATTCAT+AGG + tig0026321:58796-58815 None:intergenic 35.0%
! TTTACCCTTTTGACAGTATG+AGG - tig0026321:58875-58894 Msa1428240:CDS 35.0%
GGAATTCAGATGATGATTTG+AGG - tig0026321:58923-58942 Msa1428240:CDS 35.0%
GATGTGGCTAATGAAAATGT+TGG - tig0026321:59096-59115 Msa1428240:CDS 35.0%
TGTGGCTAATGAAAATGTTG+GGG - tig0026321:59098-59117 Msa1428240:CDS 35.0%
!! TGAAGCTTTGAAAGATATCG+AGG - tig0026321:59173-59192 Msa1428240:CDS 35.0%
ATATCGAGGACCATTTCATT+AGG - tig0026321:59187-59206 Msa1428240:CDS 35.0%
TATCGAGGACCATTTCATTA+GGG - tig0026321:59188-59207 Msa1428240:CDS 35.0%
ACTCATAAGCCCTAATGAAA+TGG + tig0026321:59200-59219 None:intergenic 35.0%
! AATTCCCCTTCATTCTAGTT+TGG - tig0026321:59257-59276 Msa1428240:intron 35.0%
TTCCTCCAAACTAGAATGAA+GGG + tig0026321:59265-59284 None:intergenic 35.0%
TTTCCTCCAAACTAGAATGA+AGG + tig0026321:59266-59285 None:intergenic 35.0%
! TCTAGTTTGGAGGAAATCAA+AGG - tig0026321:59270-59289 Msa1428240:intron 35.0%
! TGAACCAATGTGTTGGTAAA+TGG + tig0026321:59385-59404 None:intergenic 35.0%
ACTAAGATGAACCAATGTGT+TGG + tig0026321:59392-59411 None:intergenic 35.0%
AGACCTGTAGATAGTTGATT+TGG - tig0026321:59463-59482 Msa1428240:CDS 35.0%
GAACCAAATCAACTATCTAC+AGG + tig0026321:59469-59488 None:intergenic 35.0%
CTGTCAGATCTCAAATCAAT+TGG - tig0026321:59575-59594 Msa1428240:intron 35.0%
! AGCAACTTTAAAAGGTTGTG+TGG + tig0026321:59782-59801 None:intergenic 35.0%
ATAGGGTCAGCAACTTTAAA+AGG + tig0026321:59790-59809 None:intergenic 35.0%
GTCTATGCTCTCAAATCAAT+AGG + tig0026321:59808-59827 None:intergenic 35.0%
GCATGACAAAATTGATACTC+TGG - tig0026321:59902-59921 Msa1428240:CDS 35.0%
! CTTTCTGCATTGATATCAGA+TGG + tig0026321:59979-59998 None:intergenic 35.0%
TCTGGTGGTTCAAAATATGA+AGG - tig0026321:60065-60084 Msa1428240:intron 35.0%
! TGATTATGGAGGAATGGATT+CGG - tig0026321:60128-60147 Msa1428240:intron 35.0%
CTTAGGAAGGTTATATGCAT+GGG - tig0026321:60167-60186 Msa1428240:intron 35.0%
GGAAAAGAAATTGTTTGAGG+AGG - tig0026321:60188-60207 Msa1428240:intron 35.0%
GAAATTGTTTGAGGAGGTTA+AGG - tig0026321:60194-60213 Msa1428240:intron 35.0%
AGGAGATGATGAATTAAGCA+TGG - tig0026321:60467-60486 Msa1428240:intron 35.0%
GATATGAAAGATCTGTATGC+TGG - tig0026321:60504-60523 Msa1428240:intron 35.0%
GTTAAGCTGCATTTGGAAAA+TGG + tig0026321:60697-60716 None:intergenic 35.0%
ACAATCGTGGAAAATCATGT+TGG - tig0026321:60717-60736 Msa1428240:CDS 35.0%
TTGCAAAATTTATCGTACGG+GGG + tig0026321:60796-60815 None:intergenic 35.0%
!! CCATTGACTTGAAATGACAT+TGG + tig0026321:60994-61013 None:intergenic 35.0%
! CCAATGTCATTTCAAGTCAA+TGG - tig0026321:60991-61010 Msa1428240:CDS 35.0%
TTGCATATTACGAGTAATGG+CGG + tig0026321:61018-61037 None:intergenic 35.0%
TCGTTGCATATTACGAGTAA+TGG + tig0026321:61021-61040 None:intergenic 35.0%
TACTCGTAATATGCAACGAT+TGG - tig0026321:61022-61041 Msa1428240:CDS 35.0%
TGAAAGATGTGAAAGCTCTT+TGG - tig0026321:61103-61122 Msa1428240:CDS 35.0%
TCATAGATCAGAAGAAGAGT+CGG - tig0026321:61248-61267 Msa1428240:CDS 35.0%
! GTACATTTTCTGTGATGCTT+TGG + tig0026321:61445-61464 None:intergenic 35.0%
AGTGAAAATAGTGAGAAAGC+TGG - tig0026321:61483-61502 Msa1428240:CDS 35.0%
GTGAAAATAGTGAGAAAGCT+GGG - tig0026321:61484-61503 Msa1428240:CDS 35.0%
GAAAACTGCAACAGCAAAAA+TGG - tig0026321:61543-61562 Msa1428240:CDS 35.0%
GGAGGGAAAGTTATAAGGAA+AGG + tig0026321:58547-58566 None:intergenic 40.0%
CCTTAGGAGGGAAAGTTATA+AGG + tig0026321:58552-58571 None:intergenic 40.0%
CCTTATAACTTTCCCTCCTA+AGG - tig0026321:58549-58568 Msa1428240:CDS 40.0%
! GTGTTTGCTGGAGAAACATA+GGG + tig0026321:58624-58643 None:intergenic 40.0%
GATTCATGCTTGGTTTCTGA+TGG + tig0026321:58646-58665 None:intergenic 40.0%
ACAAGCAACAGATTCATGCT+TGG + tig0026321:58656-58675 None:intergenic 40.0%
GTTGCTTGTGACTCATGTAT+TGG - tig0026321:58667-58686 Msa1428240:CDS 40.0%
GGCATAGACATATGATGCAT+AGG + tig0026321:58808-58827 None:intergenic 40.0%
!!! ACCACAGAGAGATTTTGGTT+GGG - tig0026321:58846-58865 Msa1428240:CDS 40.0%
AGGTTATGAATGGCTACCAT+AGG - tig0026321:58902-58921 Msa1428240:CDS 40.0%
AAGGGTAGAACTTGAGCATA+AGG - tig0026321:58993-59012 Msa1428240:CDS 40.0%
! AGTTGTGAGTGGTGTTGAAA+CGG - tig0026321:59062-59081 Msa1428240:CDS 40.0%
GTGGCTAATGAAAATGTTGG+GGG - tig0026321:59099-59118 Msa1428240:CDS 40.0%
TGGCTAATGAAAATGTTGGG+GGG - tig0026321:59100-59119 Msa1428240:CDS 40.0%
TTCTTGATACACCTGCAGAA+GGG - tig0026321:59139-59158 Msa1428240:CDS 40.0%
TTCATTAGGGCTTATGAGTC+TGG - tig0026321:59201-59220 Msa1428240:intron 40.0%
! TCTATTAGCCTCAAGCATCT+TGG + tig0026321:59238-59257 None:intergenic 40.0%
TCCTCCAAACTAGAATGAAG+GGG + tig0026321:59264-59283 None:intergenic 40.0%
GCTGACAAATCTCCAATTGA+TGG - tig0026321:59638-59657 Msa1428240:intron 40.0%
AAATCAACTCGGCCATCAAT+TGG + tig0026321:59653-59672 None:intergenic 40.0%
TGAATAAGGAACCCTGATGT+AGG - tig0026321:59706-59725 Msa1428240:CDS 40.0%
GTTGCAACTTTGCCAGATTA+AGG - tig0026321:59830-59849 Msa1428240:CDS 40.0%
TGATGATTGCCTAGATGACA+TGG + tig0026321:60037-60056 None:intergenic 40.0%
! GATTATGGAGGAATGGATTC+GGG - tig0026321:60129-60148 Msa1428240:intron 40.0%
CCATGCATATAACCTTCCTA+AGG + tig0026321:60169-60188 None:intergenic 40.0%
CCTTAGGAAGGTTATATGCA+TGG - tig0026321:60166-60185 Msa1428240:intron 40.0%
TGTTTGAGGAGGTTAAGGTA+AGG - tig0026321:60199-60218 Msa1428240:intron 40.0%
! TTGGTGCTTAACTTCTAGTG+TGG - tig0026321:60324-60343 Msa1428240:intron 40.0%
TTCAGTGAATTCCTTGCCTT+AGG - tig0026321:60380-60399 Msa1428240:intron 40.0%
CGATTGTGTTAAGCTGCATT+TGG + tig0026321:60704-60723 None:intergenic 40.0%
AATGCAGCTTAACACAATCG+TGG - tig0026321:60704-60723 Msa1428240:CDS 40.0%
TTGCAATCAATCTCGTGGAT+TGG - tig0026321:60810-60829 Msa1428240:CDS 40.0%
!! TACGTATGCTTTTTGAGCTG+CGG + tig0026321:60893-60912 None:intergenic 40.0%
GACTTGAAATGACATTGGCA+TGG + tig0026321:60989-61008 None:intergenic 40.0%
CTTATCAGGCAACTTTCGTA+AGG + tig0026321:61055-61074 None:intergenic 40.0%
ACGAAAGTTGCCTGATAAGA+CGG - tig0026321:61056-61075 Msa1428240:CDS 40.0%
ATAAAGAGCAGCAACAGAAG+AGG - tig0026321:61136-61155 Msa1428240:CDS 40.0%
GAGAAAACTTGAGGTAGAGA+AGG - tig0026321:61323-61342 Msa1428240:CDS 40.0%
ACACAGAGGATGACATTGAA+TGG - tig0026321:61372-61391 Msa1428240:CDS 40.0%
! AGAAGATGATGGTTGCAATG+TGG - tig0026321:61521-61540 Msa1428240:CDS 40.0%
GTGTGTTGCCTCAAAACTAG+AGG - tig0026321:58354-58373 Msa1428240:CDS 45.0%
AAAGGTCAAGACCCTTAGGA+GGG + tig0026321:58564-58583 None:intergenic 45.0%
! GGTGTTTGCTGGAGAAACAT+AGG + tig0026321:58625-58644 None:intergenic 45.0%
! TGGTTTCTGATGGTGTTTGC+TGG + tig0026321:58636-58655 None:intergenic 45.0%
! TCAGAGTCTTCTGAGGAAGA+GGG - tig0026321:58700-58719 Msa1428240:CDS 45.0%
CCAAAATCTCTCTGTGGTGA+AGG + tig0026321:58844-58863 None:intergenic 45.0%
! CCTTCACCACAGAGAGATTT+TGG - tig0026321:58841-58860 Msa1428240:CDS 45.0%
!! CACCACAGAGAGATTTTGGT+TGG - tig0026321:58845-58864 Msa1428240:CDS 45.0%
TCCCAACCAAAATCTCTCTG+TGG + tig0026321:58850-58869 None:intergenic 45.0%
CTGGCCTCATACTGTCAAAA+GGG + tig0026321:58882-58901 None:intergenic 45.0%
TCTGGCCTCATACTGTCAAA+AGG + tig0026321:58883-58902 None:intergenic 45.0%
! TTTTGACAGTATGAGGCCAG+AGG - tig0026321:58882-58901 Msa1428240:CDS 45.0%
ATGAGGCCAGAGGTTATGAA+TGG - tig0026321:58892-58911 Msa1428240:CDS 45.0%
TGGTAGCCATTCATAACCTC+TGG + tig0026321:58901-58920 None:intergenic 45.0%
ATGATGATTTGAGGGCAGTG+AGG - tig0026321:58932-58951 Msa1428240:CDS 45.0%
TGATGATTTGAGGGCAGTGA+GGG - tig0026321:58933-58952 Msa1428240:CDS 45.0%
AGAAGGGATTCCAGAGTTAG+AGG - tig0026321:58960-58979 Msa1428240:CDS 45.0%
AGTTAGAGGAGGAAGTGGAA+AGG - tig0026321:58974-58993 Msa1428240:CDS 45.0%
GTTAGAGGAGGAAGTGGAAA+GGG - tig0026321:58975-58994 Msa1428240:CDS 45.0%
GGTAGAACTTGAGCATAAGG+TGG - tig0026321:58996-59015 Msa1428240:CDS 45.0%
AGAACTTGAGCATAAGGTGG+TGG - tig0026321:58999-59018 Msa1428240:CDS 45.0%
TGAAAATGTTGGGGGGCAAA+AGG - tig0026321:59107-59126 Msa1428240:CDS 45.0%
GAAAATGTTGGGGGGCAAAA+GGG - tig0026321:59108-59127 Msa1428240:CDS 45.0%
AAAATGTTGGGGGGCAAAAG+GGG - tig0026321:59109-59128 Msa1428240:CDS 45.0%
GTTCTTGATACACCTGCAGA+AGG - tig0026321:59138-59157 Msa1428240:CDS 45.0%
TAGGGCTTATGAGTCTGGTA+AGG - tig0026321:59206-59225 Msa1428240:intron 45.0%
AGGGCTTATGAGTCTGGTAA+GGG - tig0026321:59207-59226 Msa1428240:intron 45.0%
!! TCCCCTTCATTCTAGTTTGG+AGG - tig0026321:59260-59279 Msa1428240:intron 45.0%
ACCCTGATGTAGGAATGTGA+TGG - tig0026321:59716-59735 Msa1428240:CDS 45.0%
GCCATCACATTCCTACATCA+GGG + tig0026321:59720-59739 None:intergenic 45.0%
AGCCATCACATTCCTACATC+AGG + tig0026321:59721-59740 None:intergenic 45.0%
GATGTAGGAATGTGATGGCT+AGG - tig0026321:59721-59740 Msa1428240:CDS 45.0%
GAGCATGCACTTGAATAGAC+AGG - tig0026321:59880-59899 Msa1428240:CDS 45.0%
CATGGAAGTCCATGTCATCT+AGG - tig0026321:60025-60044 Msa1428240:intron 45.0%
GCAATCATCATGCAAGAGTC+TGG - tig0026321:60047-60066 Msa1428240:intron 45.0%
ATCATCATGCAAGAGTCTGG+TGG - tig0026321:60050-60069 Msa1428240:intron 45.0%
!! GAAGGATTCTTCAAGTTGGG+TGG - tig0026321:60083-60102 Msa1428240:intron 45.0%
AGATCTGTATGCTGGGATCT+TGG - tig0026321:60512-60531 Msa1428240:intron 45.0%
TTGAAGCCGAGCTTCATCAT+TGG - tig0026321:60845-60864 Msa1428240:CDS 45.0%
GTGAGTGTTACCGTCTTATC+AGG + tig0026321:61069-61088 None:intergenic 45.0%
GTGATTACTTGGAGACACTG+AGG - tig0026321:61301-61320 Msa1428240:CDS 45.0%
GACACTGAGGAGAAAACTTG+AGG - tig0026321:61314-61333 Msa1428240:CDS 45.0%
GTTGCATGCAAGAAACACAG+AGG - tig0026321:61358-61377 Msa1428240:CDS 45.0%
GAAAGGTCAAGACCCTTAGG+AGG + tig0026321:58565-58584 None:intergenic 50.0%
GGAGAAAGGTCAAGACCCTT+AGG + tig0026321:58568-58587 None:intergenic 50.0%
!! CTCAGAAGACTCTGAGGTTG+TGG + tig0026321:58695-58714 None:intergenic 50.0%
CACAACCTCAGAGTCTTCTG+AGG - tig0026321:58693-58712 Msa1428240:CDS 50.0%
CTCTTCCTCAGAAGACTCTG+AGG + tig0026321:58701-58720 None:intergenic 50.0%
! CTCAGAGTCTTCTGAGGAAG+AGG - tig0026321:58699-58718 Msa1428240:CDS 50.0%
!! TGTGGTGAAGGCATTGAAGG+TGG + tig0026321:58832-58851 None:intergenic 50.0%
!! CTCTGTGGTGAAGGCATTGA+AGG + tig0026321:58835-58854 None:intergenic 50.0%
AGGGATTCCAGAGTTAGAGG+AGG - tig0026321:58963-58982 Msa1428240:CDS 50.0%
TCCAGAGTTAGAGGAGGAAG+TGG - tig0026321:58969-58988 Msa1428240:CDS 50.0%
TCCACTTCCTCCTCTAACTC+TGG + tig0026321:58973-58992 None:intergenic 50.0%
GGTCTTAAGAAGCCCAATGC+AGG + tig0026321:59448-59467 None:intergenic 50.0%
GTGAATTCCTTGCCTTAGGC+TGG - tig0026321:60384-60403 Msa1428240:intron 50.0%
GCATACGTAGAAGCTCTGCA+TGG - tig0026321:60904-60923 Msa1428240:CDS 50.0%
ACGTAGAAGCTCTGCATGGA+TGG - tig0026321:60908-60927 Msa1428240:CDS 50.0%
GAGGAAGAGGGAGAGAGAGA+AGG - tig0026321:58712-58731 Msa1428240:CDS 55.0%
GAGGGAGAGAGAGAAGGTGA+AGG - tig0026321:58718-58737 Msa1428240:CDS 55.0%
!! GGTGAAGGCATTGAAGGTGG+TGG + tig0026321:58829-58848 None:intergenic 55.0%
TGATTTGAGGGCAGTGAGGG+AGG - tig0026321:58936-58955 Msa1428240:CDS 55.0%
GGTGGAGGGAAAGTTGTGAG+TGG - tig0026321:59051-59070 Msa1428240:CDS 55.0%
! GAGTGGTGTTGAAACGGCGA+AGG - tig0026321:59068-59087 Msa1428240:CDS 55.0%
TGTTGAAACGGCGAAGGCTG+TGG - tig0026321:59074-59093 Msa1428240:CDS 55.0%
AGCAACTCTCTCCCTTCTGC+AGG + tig0026321:59153-59172 None:intergenic 55.0%
GGGTGTGACCAAGATGCTTG+AGG - tig0026321:59227-59246 Msa1428240:intron 55.0%
GCTATCTCCAGCCTAAGGCA+AGG + tig0026321:60394-60413 None:intergenic 55.0%
CTTAGGCTGGAGATAGCACG+CGG - tig0026321:60397-60416 Msa1428240:intron 55.0%
GATGAAGCTCGGCTTCAAGC+TGG + tig0026321:60843-60862 None:intergenic 55.0%
CGCACGCCAATGATGAAGCT+CGG + tig0026321:60854-60873 None:intergenic 55.0%
AGGGCAGTGAGGGAGGAAGA+AGG - tig0026321:58943-58962 Msa1428240:CDS 60.0%
GGGCAGTGAGGGAGGAAGAA+GGG - tig0026321:58944-58963 Msa1428240:CDS 60.0%
AACGGCGAAGGCTGTGGATG+TGG - tig0026321:59080-59099 Msa1428240:CDS 60.0%
CGCGTGCTATCTCCAGCCTA+AGG + tig0026321:60399-60418 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0026321 gene 58349 61572 58349 ID=Msa1428240;Name=Msa1428240
tig0026321 mRNA 58349 61572 58349 ID=Msa1428240-mRNA-1;Parent=Msa1428240;Name=Msa1428240-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.25|1|1|1|4|0|749
tig0026321 exon 60630 61572 60630 ID=Msa1428240-mRNA-1:exon:5845;Parent=Msa1428240-mRNA-1
tig0026321 exon 59706 59926 59706 ID=Msa1428240-mRNA-1:exon:5844;Parent=Msa1428240-mRNA-1
tig0026321 exon 59296 59519 59296 ID=Msa1428240-mRNA-1:exon:5843;Parent=Msa1428240-mRNA-1
tig0026321 exon 58349 59210 58349 ID=Msa1428240-mRNA-1:exon:5842;Parent=Msa1428240-mRNA-1
tig0026321 CDS 60630 61572 60630 ID=Msa1428240-mRNA-1:cds;Parent=Msa1428240-mRNA-1
tig0026321 CDS 59706 59926 59706 ID=Msa1428240-mRNA-1:cds;Parent=Msa1428240-mRNA-1
tig0026321 CDS 59296 59519 59296 ID=Msa1428240-mRNA-1:cds;Parent=Msa1428240-mRNA-1
tig0026321 CDS 58349 59210 58349 ID=Msa1428240-mRNA-1:cds;Parent=Msa1428240-mRNA-1
Gene Sequence

>Msa1428240

ATGGGGTGTGTTGCCTCAAAACTAGAGGAAGAAGAAGAAGTAGTAGCTATTTGTAGAGAGAGAAAACGGCAGCTGAAACTAGCTGTAGAGAAAAGATATGCACTTGCTGAAGCTCATTGTAAATATTTTCACTCTTTGAATGCTGTAGCTGCTGCTATTAAGCTCTTTGTTGCAAGACATTCTTCACCTTCTTCACCTTTCCTTATAACTTTCCCTCCTAAGGGTCTTGACCTTTCTCCTTCTCATTCATCAACTGAAAATGTCATAAATAACCCTATGTTTCTCCAGCAAACACCATCAGAAACCAAGCATGAATCTGTTGCTTGTGACTCATGTATTGGTTCCACAACCTCAGAGTCTTCTGAGGAAGAGGGAGAGAGAGAAGGTGAAGGTTGTAGAGAAGTTCAAAATGAACAGCCAAGTGAGTATTTCTACATGCACATGCCTATGAATATGCCTATGCATCATATGTCTATGCCACCACCTTCAATGCCTTCACCACAGAGAGATTTTGGTTGGGATTTCTTTTACCCTTTTGACAGTATGAGGCCAGAGGTTATGAATGGCTACCATAGGAATTCAGATGATGATTTGAGGGCAGTGAGGGAGGAAGAAGGGATTCCAGAGTTAGAGGAGGAAGTGGAAAGGGTAGAACTTGAGCATAAGGTGGTGGTGAGTGTTGAAGAGAAGAATAATAAAGAAGGTGGAGGGAAAGTTGTGAGTGGTGTTGAAACGGCGAAGGCTGTGGATGTGGCTAATGAAAATGTTGGGGGGCAAAAGGGGCTTGCTGTTCTTGATACACCTGCAGAAGGGAGAGAGTTGCTTGAAGCTTTGAAAGATATCGAGGACCATTTCATTAGGGCTTATGAGTCTGGTAAGGGTGTGACCAAGATGCTTGAGGCTAATAGAATTCCCCTTCATTCTAGTTTGGAGGAAATCAAAGAAAGTTCGACCAAACTCATTAATGCAATAACATGGAAGTCCATGTCATCTAGGCAATCATCATGCAAGAGTCTGGTGGTTCAAAATATGAAGGATTCTTCAAGTTGGGTGGAATATAAGAATGATCTATTTGATGATTATGGAGGAATGGATTCGGGAAGTCATTTATTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAATTGTTTGAGGAGGTTAAGGCTGGAGATAGCACGCGGAAAAATTATGAGAAAAAATGTGCTCAGTTGAGAAATAAGAATGTTAGAGGAGATGATGAATTAAGCATGGACAAGACTAGAGCTGATATGAAAGATCTGTATGCTGGGATCTTGGTTGCAATTCGACGTGCAGAGTCGATCTCAAAGAGAATTCAGAAAATGAGAGACGAAGAATTACAGCCTCAAATTGTTGAACTATTGAAAGGCTTAACACAATCGTGGAAAATCATGTTGGAGTCTCATGAAACTCAGAAGATGATTCTTTCCGAAGTCAAATACTTCACATGTCCCCCGTACGATAAATTTTGCAATCAATCTCGTGGATTGGCAACTCTCCAGCTTGAAGCCGAGCTTCATCATTGGCGTGCGTGCTTTAGAGAGTATACCGCAGCTCAAAAAGCATACGTAGAAGCTCTGCATGGATGGTTAAGTAAGTTCGTTGTCCATGAAGTTGAATTTTACTCGAGAAGCAAAAATGTTGCCATGCCAATGTCATTTCAAGTCAATGGGCCGCCATTACTCGTAATATGCAACGATTGGTTAACTTCCTTACGAAAGTTGCCTGATAAGACGGTAACACTCACTTTGAAAAGTGTTGTGAAAGATGTGAAAGCTCTTTGGATTCAACAAAATAAAGAGCAGCAACAGAAGAGGAAAGTAGATAACTTAACGAAAGATTTAGATAGAAGATATGATGGATCATATAAACTGAAGACGAAGATGCTTGAGTTGCAAGTAACAGATCATAGATCAGAAGAAGAGTCGGTTCATGAAGAAGAATGCTTAATGGATAAAAGTGATTACTTGGAGACACTGAGGAGAAAACTTGAGGTAGAGAAGGAGAAGCATTACAGTTGCATGCAAGAAACACAGAGGATGACATTGAATGGATTGCAATTTGGGTTTTCTCAAGTACTTGAATCTTTGACAGAGTTCTCCAAAGCATCACAGAAAATGTACAATGATCTCGTGACTTTTAGTGAAAATAGTGAGAAAGCTGGGAACATTTCGTATATAGAAGATGATGGTTGCAATGTGGAAAACTGCAACAGCAAAAATGGACAATAG
Protein sequence

>Msa1428240

MGCVASKLEEEEEVVAICRERKRQLKLAVEKRYALAEAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPKGLDLSPSHSSTENVINNPMFLQQTPSETKHESVACDSCIGSTTSESSEEEGEREGEGCREVQNEQPSEYFYMHMPMNMPMHHMSMPPPSMPSPQRDFGWDFFYPFDSMRPEVMNGYHRNSDDDLRAVREEEGIPELEEEVERVELEHKVVVSVEEKNNKEGGGKVVSGVETAKAVDVANENVGGQKGLAVLDTPAEGRELLEALKDIEDHFIRAYESGKGVTKMLEANRIPLHSSLEEIKESSTKLINAITWKSMSSRQSSCKSLVVQNMKDSSSWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCAQLRNKNVRGDDELSMDKTRADMKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKIMLESHETQKMILSEVKYFTCPPYDKFCNQSRGLATLQLEAELHHWRACFREYTAAQKAYVEALHGWLSKFVVHEVEFYSRSKNVAMPMSFQVNGPPLLVICNDWLTSLRKLPDKTVTLTLKSVVKDVKALWIQQNKEQQQKRKVDNLTKDLDRRYDGSYKLKTKMLELQVTDHRSEEESVHEEECLMDKSDYLETLRRKLEVEKEKHYSCMQETQRMTLNGLQFGFSQVLESLTEFSKASQKMYNDLVTFSENSEKAGNISYIEDDGCNVENCNSKNGQ*