Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435960 | CAA61334.1 | 99.483 | 387 | 1 | 1 | 1 | 387 | 1 | 386 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435960 | sp|P42753|CCD31_ARATH | 56.026 | 307 | 110 | 6 | 1 | 307 | 1 | 282 | 1.17e-107 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435960 | Q40338 | 99.483 | 387 | 1 | 1 | 1 | 387 | 1 | 386 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa1435960 | 0.840860 | 6.742564e-58 | -8.615850e-47 |
| Msa0016040 | Msa1435960 | 0.812827 | 3.484474e-51 | -8.615850e-47 |
| Msa0018920 | Msa1435960 | 0.802339 | 5.880287e-49 | -8.615850e-47 |
| Msa0020540 | Msa1435960 | 0.840296 | 9.471211e-58 | -8.615850e-47 |
| Msa0032970 | Msa1435960 | 0.802754 | 4.827841e-49 | -8.615850e-47 |
| Msa0032980 | Msa1435960 | 0.819938 | 8.928344e-53 | -8.615850e-47 |
| Msa0037680 | Msa1435960 | 0.816046 | 6.766112e-52 | -8.615850e-47 |
| Msa0040640 | Msa1435960 | 0.810890 | 9.205734e-51 | -8.615850e-47 |
| Msa0042640 | Msa1435960 | 0.888073 | 8.152251e-73 | -8.615850e-47 |
| Msa0044780 | Msa1435960 | -0.806608 | 7.573233e-50 | -8.615850e-47 |
| Msa0048510 | Msa1435960 | 0.808954 | 2.402511e-50 | -8.615850e-47 |
| Msa0050660 | Msa1435960 | 0.801908 | 7.209578e-49 | -8.615850e-47 |
| Msa0050700 | Msa1435960 | 0.805744 | 1.151328e-49 | -8.615850e-47 |
| Msa0057840 | Msa1435960 | 0.803185 | 3.933328e-49 | -8.615850e-47 |
| Msa0062340 | Msa1435960 | 0.806525 | 7.886357e-50 | -8.615850e-47 |
| Msa0067060 | Msa1435960 | 0.822273 | 2.587600e-53 | -8.615850e-47 |
| Msa0068150 | Msa1435960 | 0.821224 | 4.523530e-53 | -8.615850e-47 |
| Msa0075530 | Msa1435960 | 0.839162 | 1.868877e-57 | -8.615850e-47 |
| Msa0077340 | Msa1435960 | 0.829068 | 6.329753e-55 | -8.615850e-47 |
| Msa0077560 | Msa1435960 | 0.836614 | 8.442574e-57 | -8.615850e-47 |
| Msa0078130 | Msa1435960 | 0.819621 | 1.054725e-52 | -8.615850e-47 |
| Msa0089460 | Msa1435960 | 0.932564 | 7.052105e-95 | -8.615850e-47 |
| Msa0091350 | Msa1435960 | 0.817075 | 3.978975e-52 | -8.615850e-47 |
| Msa0094570 | Msa1435960 | 0.831094 | 2.028514e-55 | -8.615850e-47 |
| Msa0094790 | Msa1435960 | 0.860844 | 1.555875e-63 | -8.615850e-47 |
| Msa0102240 | Msa1435960 | 0.826968 | 2.027619e-54 | -8.615850e-47 |
| Msa0109730 | Msa1435960 | 0.805594 | 1.238159e-49 | -8.615850e-47 |
| Msa0112670 | Msa1435960 | 0.824660 | 7.156367e-54 | -8.615850e-47 |
| Msa0115550 | Msa1435960 | 0.805327 | 1.408074e-49 | -8.615850e-47 |
| Msa1364410 | Msa1435960 | 0.818585 | 1.815156e-52 | -8.615850e-47 |
| Msa1365500 | Msa1435960 | 0.815283 | 1.000655e-51 | -8.615850e-47 |
| Msa1366150 | Msa1435960 | 0.819793 | 9.635880e-53 | -8.615850e-47 |
| Msa1368750 | Msa1435960 | 0.820601 | 6.293747e-53 | -8.615850e-47 |
| Msa1372040 | Msa1435960 | 0.872074 | 4.203722e-67 | -8.615850e-47 |
| Msa1374790 | Msa1435960 | 0.817617 | 3.004522e-52 | -8.615850e-47 |
| Msa1381470 | Msa1435960 | 0.814725 | 1.330849e-51 | -8.615850e-47 |
| Msa1384150 | Msa1435960 | 0.836642 | 8.304767e-57 | -8.615850e-47 |
| Msa1387440 | Msa1435960 | 0.831074 | 2.050653e-55 | -8.615850e-47 |
| Msa1387500 | Msa1435960 | 0.807810 | 4.213535e-50 | -8.615850e-47 |
| Msa1389820 | Msa1435960 | 0.800991 | 1.111372e-48 | -8.615850e-47 |
| Msa1393560 | Msa1435960 | 0.800910 | 1.154838e-48 | -8.615850e-47 |
| Msa1405460 | Msa1435960 | 0.841203 | 5.479803e-58 | -8.615850e-47 |
| Msa1406720 | Msa1435960 | 0.809431 | 1.898665e-50 | -8.615850e-47 |
| Msa1407840 | Msa1435960 | 0.801244 | 9.867988e-49 | -8.615850e-47 |
| Msa1409410 | Msa1435960 | 0.815383 | 9.507231e-52 | -8.615850e-47 |
| Msa1426320 | Msa1435960 | 0.814458 | 1.525028e-51 | -8.615850e-47 |
| Msa1428240 | Msa1435960 | 0.808008 | 3.825461e-50 | -8.615850e-47 |
| Msa1429070 | Msa1435960 | 0.811712 | 6.103895e-51 | -8.615850e-47 |
| Msa1432520 | Msa1435960 | 0.800912 | 1.153282e-48 | -8.615850e-47 |
| Msa1433860 | Msa1435960 | 0.802747 | 4.845468e-49 | -8.615850e-47 |
| Msa1435960 | Msa1436620 | 0.853239 | 2.724513e-61 | -8.615850e-47 |
| Msa1435960 | Msa1437810 | 0.804091 | 2.551210e-49 | -8.615850e-47 |
| Msa1435960 | Msa1445120 | 0.805350 | 1.392550e-49 | -8.615850e-47 |
| Msa1435960 | Msa1450190 | 0.825014 | 5.905236e-54 | -8.615850e-47 |
| Msa1435960 | Msa1451820 | 0.818795 | 1.626306e-52 | -8.615850e-47 |
| Msa1435960 | Msa1454010 | 0.808378 | 3.189498e-50 | -8.615850e-47 |
| Msa1435960 | Msa1457840 | 0.823036 | 1.719438e-53 | -8.615850e-47 |
| Msa0606100 | Msa1435960 | 0.813947 | 1.977923e-51 | -8.615850e-47 |
| Msa0607800 | Msa1435960 | 0.812488 | 4.134810e-51 | -8.615850e-47 |
| Msa0620500 | Msa1435960 | 0.807762 | 4.314515e-50 | -8.615850e-47 |
| Msa0621710 | Msa1435960 | 0.838812 | 2.301723e-57 | -8.615850e-47 |
| Msa0625620 | Msa1435960 | 0.811977 | 5.345200e-51 | -8.615850e-47 |
| Msa0642550 | Msa1435960 | 0.800514 | 1.390712e-48 | -8.615850e-47 |
| Msa0648040 | Msa1435960 | 0.811070 | 8.411790e-51 | -8.615850e-47 |
| Msa0652710 | Msa1435960 | 0.815897 | 7.306138e-52 | -8.615850e-47 |
| Msa0654740 | Msa1435960 | 0.814067 | 1.860456e-51 | -8.615850e-47 |
| Msa0657700 | Msa1435960 | 0.816754 | 4.698510e-52 | -8.615850e-47 |
| Msa0662820 | Msa1435960 | 0.801070 | 1.070677e-48 | -8.615850e-47 |
| Msa0666700 | Msa1435960 | 0.828389 | 9.239391e-55 | -8.615850e-47 |
| Msa0668900 | Msa1435960 | 0.805320 | 1.413181e-49 | -8.615850e-47 |
| Msa0687090 | Msa1435960 | 0.810381 | 1.185914e-50 | -8.615850e-47 |
| Msa0690740 | Msa1435960 | 0.809779 | 1.598397e-50 | -8.615850e-47 |
| Msa0691270 | Msa1435960 | 0.810616 | 1.055046e-50 | -8.615850e-47 |
| Msa0693890 | Msa1435960 | 0.830228 | 3.305704e-55 | -8.615850e-47 |
| Msa0698730 | Msa1435960 | 0.824039 | 1.001900e-53 | -8.615850e-47 |
| Msa0702810 | Msa1435960 | 0.815168 | 1.061275e-51 | -8.615850e-47 |
| Msa0709440 | Msa1435960 | 0.819999 | 8.645613e-53 | -8.615850e-47 |
| Msa0714520 | Msa1435960 | 0.813134 | 2.985578e-51 | -8.615850e-47 |
| Msa0716480 | Msa1435960 | 0.835276 | 1.843889e-56 | -8.615850e-47 |
| Msa0716890 | Msa1435960 | 0.816533 | 5.265201e-52 | -8.615850e-47 |
| Msa0717900 | Msa1435960 | 0.835866 | 1.307607e-56 | -8.615850e-47 |
| Msa0719270 | Msa1435960 | 0.863735 | 2.013463e-64 | -8.615850e-47 |
| Msa0728780 | Msa1435960 | 0.812183 | 4.819115e-51 | -8.615850e-47 |
| Msa0734250 | Msa1435960 | 0.839659 | 1.387817e-57 | -8.615850e-47 |
| Msa0740710 | Msa1435960 | 0.828490 | 8.732006e-55 | -8.615850e-47 |
| Msa0743440 | Msa1435960 | 0.823881 | 1.091133e-53 | -8.615850e-47 |
| Msa0760970 | Msa1435960 | 0.833449 | 5.298982e-56 | -8.615850e-47 |
| Msa0763550 | Msa1435960 | 0.801091 | 1.060346e-48 | -8.615850e-47 |
| Msa0773630 | Msa1435960 | 0.828232 | 1.007900e-54 | -8.615850e-47 |
| Msa0778600 | Msa1435960 | 0.842911 | 1.936463e-58 | -8.615850e-47 |
| Msa0780910 | Msa1435960 | 0.819065 | 1.412168e-52 | -8.615850e-47 |
| Msa0792370 | Msa1435960 | 0.805673 | 1.191692e-49 | -8.615850e-47 |
| Msa0805680 | Msa1435960 | 0.820769 | 5.757322e-53 | -8.615850e-47 |
| Msa0811020 | Msa1435960 | 0.822784 | 1.967696e-53 | -8.615850e-47 |
| Msa0813160 | Msa1435960 | 0.816890 | 4.379860e-52 | -8.615850e-47 |
| Msa0815970 | Msa1435960 | 0.836146 | 1.110343e-56 | -8.615850e-47 |
| Msa0816080 | Msa1435960 | 0.809907 | 1.500213e-50 | -8.615850e-47 |
| Msa0818130 | Msa1435960 | 0.800569 | 1.355226e-48 | -8.615850e-47 |
| Msa0821160 | Msa1435960 | 0.811511 | 6.749488e-51 | -8.615850e-47 |
| Msa0828970 | Msa1435960 | 0.820623 | 6.219389e-53 | -8.615850e-47 |
| Msa0837460 | Msa1435960 | 0.842930 | 1.913536e-58 | -8.615850e-47 |
| Msa0840520 | Msa1435960 | 0.850584 | 1.545037e-60 | -8.615850e-47 |
| Msa0841590 | Msa1435960 | 0.840925 | 6.483213e-58 | -8.615850e-47 |
| Msa0122330 | Msa1435960 | 0.822076 | 2.874572e-53 | -8.615850e-47 |
| Msa0123070 | Msa1435960 | 0.813162 | 2.943608e-51 | -8.615850e-47 |
| Msa0125360 | Msa1435960 | 0.828095 | 1.087530e-54 | -8.615850e-47 |
| Msa0140130 | Msa1435960 | 0.861821 | 7.833515e-64 | -8.615850e-47 |
| Msa0140380 | Msa1435960 | 0.816696 | 4.840038e-52 | -8.615850e-47 |
| Msa0141640 | Msa1435960 | 0.816256 | 6.074825e-52 | -8.615850e-47 |
| Msa0156050 | Msa1435960 | 0.855533 | 5.920808e-62 | -8.615850e-47 |
| Msa0156090 | Msa1435960 | 0.852562 | 4.254509e-61 | -8.615850e-47 |
| Msa0159590 | Msa1435960 | 0.837175 | 6.070254e-57 | -8.615850e-47 |
| Msa0159620 | Msa1435960 | 0.826859 | 2.152360e-54 | -8.615850e-47 |
| Msa0161930 | Msa1435960 | 0.806079 | 9.790757e-50 | -8.615850e-47 |
| Msa0165830 | Msa1435960 | 0.803743 | 3.014129e-49 | -8.615850e-47 |
| Msa0168050 | Msa1435960 | 0.833697 | 4.596193e-56 | -8.615850e-47 |
| Msa0170070 | Msa1435960 | 0.806079 | 9.792149e-50 | -8.615850e-47 |
| Msa0174290 | Msa1435960 | 0.803993 | 2.673339e-49 | -8.615850e-47 |
| Msa0178450 | Msa1435960 | 0.992219 | 5.389370e-192 | -8.615850e-47 |
| Msa0188610 | Msa1435960 | 0.820337 | 7.234965e-53 | -8.615850e-47 |
| Msa0188620 | Msa1435960 | 0.817042 | 4.049333e-52 | -8.615850e-47 |
| Msa0190730 | Msa1435960 | 0.806920 | 6.508398e-50 | -8.615850e-47 |
| Msa0230780 | Msa1435960 | 0.802301 | 5.986716e-49 | -8.615850e-47 |
| Msa0230800 | Msa1435960 | 0.803534 | 3.329461e-49 | -8.615850e-47 |
| Msa0230840 | Msa1435960 | 0.830269 | 3.229749e-55 | -8.615850e-47 |
| Msa0230870 | Msa1435960 | 0.807977 | 3.882448e-50 | -8.615850e-47 |
| Msa0232760 | Msa1435960 | 0.831727 | 1.416953e-55 | -8.615850e-47 |
| Msa1228580 | Msa1435960 | 0.872973 | 2.105738e-67 | -8.615850e-47 |
| Msa1228630 | Msa1435960 | 0.829244 | 5.737993e-55 | -8.615850e-47 |
| Msa1244240 | Msa1435960 | 0.809726 | 1.640673e-50 | -8.615850e-47 |
| Msa1252790 | Msa1435960 | 0.839472 | 1.552185e-57 | -8.615850e-47 |
| Msa1254100 | Msa1435960 | 0.806033 | 1.000991e-49 | -8.615850e-47 |
| Msa1254540 | Msa1435960 | 0.832042 | 1.184733e-55 | -8.615850e-47 |
| Msa1261050 | Msa1435960 | 0.800868 | 1.177892e-48 | -8.615850e-47 |
| Msa1263740 | Msa1435960 | 0.840532 | 8.215174e-58 | -8.615850e-47 |
| Msa1263780 | Msa1435960 | 0.842820 | 2.047295e-58 | -8.615850e-47 |
| Msa1265450 | Msa1435960 | 0.832307 | 1.018851e-55 | -8.615850e-47 |
| Msa1266690 | Msa1435960 | 0.806465 | 8.119599e-50 | -8.615850e-47 |
| Msa1268540 | Msa1435960 | 0.802763 | 4.808483e-49 | -8.615850e-47 |
| Msa1279120 | Msa1435960 | 0.851230 | 1.015847e-60 | -8.615850e-47 |
| Msa1294460 | Msa1435960 | 0.816594 | 5.101776e-52 | -8.615850e-47 |
| Msa1294790 | Msa1435960 | 0.808786 | 2.609445e-50 | -8.615850e-47 |
| Msa1297070 | Msa1435960 | 0.800990 | 1.111988e-48 | -8.615850e-47 |
| Msa1300460 | Msa1435960 | 0.834601 | 2.727407e-56 | -8.615850e-47 |
| Msa1301820 | Msa1435960 | 0.805830 | 1.104297e-49 | -8.615850e-47 |
| Msa1303560 | Msa1435960 | 0.810282 | 1.245718e-50 | -8.615850e-47 |
| Msa1303650 | Msa1435960 | 0.814479 | 1.508535e-51 | -8.615850e-47 |
| Msa1308820 | Msa1435960 | 0.817551 | 3.109227e-52 | -8.615850e-47 |
| Msa1308850 | Msa1435960 | 0.854855 | 9.322686e-62 | -8.615850e-47 |
| Msa1309090 | Msa1435960 | 0.811290 | 7.538165e-51 | -8.615850e-47 |
| Msa1332950 | Msa1435960 | 0.835205 | 1.921157e-56 | -8.615850e-47 |
| Msa1338210 | Msa1435960 | 0.808444 | 3.087954e-50 | -8.615850e-47 |
| Msa1339170 | Msa1435960 | 0.806082 | 9.776217e-50 | -8.615850e-47 |
| Msa0367150 | Msa1435960 | 0.807440 | 5.050187e-50 | -8.615850e-47 |
| Msa0367690 | Msa1435960 | 0.852324 | 4.973901e-61 | -8.615850e-47 |
| Msa0368860 | Msa1435960 | 0.812276 | 4.599200e-51 | -8.615850e-47 |
| Msa0373170 | Msa1435960 | 0.810483 | 1.127415e-50 | -8.615850e-47 |
| Msa0373500 | Msa1435960 | 0.832662 | 8.319852e-56 | -8.615850e-47 |
| Msa0383000 | Msa1435960 | 0.829974 | 3.811354e-55 | -8.615850e-47 |
| Msa0409830 | Msa1435960 | 0.800283 | 1.549535e-48 | -8.615850e-47 |
| Msa0415450 | Msa1435960 | 0.858927 | 5.886209e-63 | -8.615850e-47 |
| Msa0416160 | Msa1435960 | 0.816193 | 6.273694e-52 | -8.615850e-47 |
| Msa0421750 | Msa1435960 | 0.802026 | 6.820756e-49 | -8.615850e-47 |
| Msa0432010 | Msa1435960 | 0.818971 | 1.483297e-52 | -8.615850e-47 |
| Msa0433150 | Msa1435960 | 0.830647 | 2.610328e-55 | -8.615850e-47 |
| Msa0433760 | Msa1435960 | 0.811319 | 7.429117e-51 | -8.615850e-47 |
| Msa0436910 | Msa1435960 | 0.800010 | 1.760920e-48 | -8.615850e-47 |
| Msa0459740 | Msa1435960 | 0.804363 | 2.239647e-49 | -8.615850e-47 |
| Msa0460070 | Msa1435960 | 0.861033 | 1.363386e-63 | -8.615850e-47 |
| Msa0462780 | Msa1435960 | 0.816790 | 4.611146e-52 | -8.615850e-47 |
| Msa0466520 | Msa1435960 | 0.814987 | 1.164438e-51 | -8.615850e-47 |
| Msa0467690 | Msa1435960 | 0.809110 | 2.224591e-50 | -8.615850e-47 |
| Msa0468620 | Msa1435960 | 0.836458 | 9.248612e-57 | -8.615850e-47 |
| Msa0477630 | Msa1435960 | 0.806656 | 7.397531e-50 | -8.615850e-47 |
| Msa0481890 | Msa1435960 | 0.816932 | 4.285804e-52 | -8.615850e-47 |
| Msa1002640 | Msa1435960 | 0.812764 | 3.598362e-51 | -8.615850e-47 |
| Msa1076020 | Msa1435960 | 0.818224 | 2.191725e-52 | -8.615850e-47 |
| Msa1078880 | Msa1435960 | 0.833953 | 3.965285e-56 | -8.615850e-47 |
| Msa1078970 | Msa1435960 | 0.832901 | 7.256297e-56 | -8.615850e-47 |
| Msa1078990 | Msa1435960 | 0.805985 | 1.024599e-49 | -8.615850e-47 |
| Msa1082380 | Msa1435960 | 0.815082 | 1.109284e-51 | -8.615850e-47 |
| Msa1084530 | Msa1435960 | 0.823785 | 1.148680e-53 | -8.615850e-47 |
| Msa0269210 | Msa1435960 | 0.836923 | 7.039997e-57 | -8.615850e-47 |
| Msa0270280 | Msa1435960 | 0.811659 | 6.268467e-51 | -8.615850e-47 |
| Msa0272260 | Msa1435960 | 0.810480 | 1.129010e-50 | -8.615850e-47 |
| Msa0284800 | Msa1435960 | 0.806069 | 9.835992e-50 | -8.615850e-47 |
| Msa0307670 | Msa1435960 | 0.808289 | 3.331385e-50 | -8.615850e-47 |
| Msa0347530 | Msa1435960 | 0.811252 | 7.683389e-51 | -8.615850e-47 |
| Msa1116660 | Msa1435960 | 0.822409 | 2.406218e-53 | -8.615850e-47 |
| Msa1116740 | Msa1435960 | 0.818210 | 2.207976e-52 | -8.615850e-47 |
| Msa1123970 | Msa1435960 | 0.802947 | 4.404090e-49 | -8.615850e-47 |
| Msa1125820 | Msa1435960 | 0.826335 | 2.871075e-54 | -8.615850e-47 |
| Msa1125990 | Msa1435960 | 0.825647 | 4.181736e-54 | -8.615850e-47 |
| Msa1127280 | Msa1435960 | 0.808440 | 3.093386e-50 | -8.615850e-47 |
| Msa1148630 | Msa1435960 | 0.805208 | 1.491444e-49 | -8.615850e-47 |
| Msa1154550 | Msa1435960 | 0.806423 | 8.284989e-50 | -8.615850e-47 |
| Msa1159590 | Msa1435960 | 0.817695 | 2.885308e-52 | -8.615850e-47 |
| Msa1162880 | Msa1435960 | 0.813482 | 2.503768e-51 | -8.615850e-47 |
| Msa1165480 | Msa1435960 | 0.806847 | 6.741513e-50 | -8.615850e-47 |
| Msa1169190 | Msa1435960 | 0.830887 | 2.279464e-55 | -8.615850e-47 |
| Msa1171290 | Msa1435960 | 0.816274 | 6.016530e-52 | -8.615850e-47 |
| Msa1183740 | Msa1435960 | 0.807793 | 4.249134e-50 | -8.615850e-47 |
| Msa1183910 | Msa1435960 | 0.823456 | 1.372012e-53 | -8.615850e-47 |
| Msa1190390 | Msa1435960 | 0.812603 | 3.901018e-51 | -8.615850e-47 |
| Msa1192560 | Msa1435960 | 0.860540 | 1.923835e-63 | -8.615850e-47 |
| Msa1192590 | Msa1435960 | 0.859454 | 4.090114e-63 | -8.615850e-47 |
| Msa1205110 | Msa1435960 | 0.818691 | 1.717628e-52 | -8.615850e-47 |
| Msa1213830 | Msa1435960 | 0.825492 | 4.552690e-54 | -8.615850e-47 |
| Msa1214350 | Msa1435960 | 0.815996 | 6.941146e-52 | -8.615850e-47 |
| Msa1215980 | Msa1435960 | 0.808536 | 2.951828e-50 | -8.615850e-47 |
| Msa1218820 | Msa1435960 | 0.840756 | 7.179389e-58 | -8.615850e-47 |
| Msa1219770 | Msa1435960 | 0.833151 | 6.288909e-56 | -8.615850e-47 |
| Msa1221120 | Msa1435960 | 0.831976 | 1.229577e-55 | -8.615850e-47 |
| Msa0513080 | Msa1435960 | 0.814127 | 1.804724e-51 | -8.615850e-47 |
| Msa0514020 | Msa1435960 | 0.805174 | 1.516066e-49 | -8.615850e-47 |
| Msa0514500 | Msa1435960 | 0.837685 | 4.492652e-57 | -8.615850e-47 |
| Msa0520260 | Msa1435960 | 0.802833 | 4.649962e-49 | -8.615850e-47 |
| Msa0520870 | Msa1435960 | 0.816423 | 5.571932e-52 | -8.615850e-47 |
| Msa0521320 | Msa1435960 | 0.806349 | 8.588221e-50 | -8.615850e-47 |
| Msa0521680 | Msa1435960 | 0.823106 | 1.655475e-53 | -8.615850e-47 |
| Msa0524520 | Msa1435960 | 0.813662 | 2.285606e-51 | -8.615850e-47 |
| Msa0527850 | Msa1435960 | 0.813824 | 2.104656e-51 | -8.615850e-47 |
| Msa0529030 | Msa1435960 | 0.840154 | 1.031556e-57 | -8.615850e-47 |
| Msa0531960 | Msa1435960 | 0.823964 | 1.042904e-53 | -8.615850e-47 |
| Msa0541300 | Msa1435960 | 0.800987 | 1.113451e-48 | -8.615850e-47 |
| Msa0541310 | Msa1435960 | 0.802858 | 4.595589e-49 | -8.615850e-47 |
| Msa0553750 | Msa1435960 | 0.800554 | 1.365006e-48 | -8.615850e-47 |
| Msa0561560 | Msa1435960 | 0.820577 | 6.374086e-53 | -8.615850e-47 |
| Msa0563940 | Msa1435960 | 0.810360 | 1.197930e-50 | -8.615850e-47 |
| Msa0563980 | Msa1435960 | 0.803723 | 3.042209e-49 | -8.615850e-47 |
| Msa0566290 | Msa1435960 | 0.802507 | 5.429653e-49 | -8.615850e-47 |
| Msa0569530 | Msa1435960 | 0.809009 | 2.337943e-50 | -8.615850e-47 |
| Msa0570010 | Msa1435960 | 0.815365 | 9.597660e-52 | -8.615850e-47 |
| Msa0580200 | Msa1435960 | 0.815303 | 9.906893e-52 | -8.615850e-47 |
| Msa0580810 | Msa1435960 | 0.810981 | 8.796465e-51 | -8.615850e-47 |
| Msa0586200 | Msa1435960 | 0.805094 | 1.576033e-49 | -8.615850e-47 |
| Msa0857890 | Msa1435960 | 0.808548 | 2.934685e-50 | -8.615850e-47 |
| Msa0863620 | Msa1435960 | 0.822241 | 2.631815e-53 | -8.615850e-47 |
| Msa0866530 | Msa1435960 | 0.842693 | 2.213192e-58 | -8.615850e-47 |
| Msa0879920 | Msa1435960 | 0.831283 | 1.822070e-55 | -8.615850e-47 |
| Msa0900760 | Msa1435960 | 0.813276 | 2.778099e-51 | -8.615850e-47 |
| Msa0909760 | Msa1435960 | 0.827172 | 1.811478e-54 | -8.615850e-47 |
| Msa0931590 | Msa1435960 | 0.834416 | 3.035821e-56 | -8.615850e-47 |
| Msa0935740 | Msa1435960 | 0.806580 | 7.676891e-50 | -8.615850e-47 |
| Msa0945030 | Msa1435960 | 0.800133 | 1.663048e-48 | -8.615850e-47 |
| Msa0972740 | Msa1435960 | 0.817692 | 2.889729e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435960 | MtrunA17_Chr1g0208231 | 93.048 | 374 | 23 | 1 | 17 | 387 | 11 | 384 | 0.0 | 673 |
| Msa1435960 | MtrunA17_Chr3g0134261 | 53.533 | 368 | 130 | 12 | 14 | 366 | 3 | 344 | 8.41e-116 | 341 |
| Msa1435960 | MtrunA17_Chr4g0053381 | 49.862 | 363 | 163 | 8 | 23 | 381 | 8 | 355 | 1.71e-113 | 335 |
| Msa1435960 | MtrunA17_Chr5g0412471 | 37.023 | 262 | 157 | 2 | 110 | 371 | 92 | 345 | 1.69e-48 | 167 |
| Msa1435960 | MtrunA17_Chr4g0041721 | 33.588 | 262 | 164 | 5 | 76 | 334 | 59 | 313 | 4.09e-47 | 164 |
| Msa1435960 | MtrunA17_Chr3g0133211 | 52.672 | 131 | 61 | 1 | 96 | 225 | 82 | 212 | 2.44e-42 | 152 |
| Msa1435960 | MtrunA17_Chr5g0414271 | 38.839 | 224 | 126 | 2 | 98 | 312 | 56 | 277 | 2.62e-39 | 143 |
| Msa1435960 | MtrunA17_Chr8g0364521 | 37.168 | 226 | 131 | 2 | 96 | 312 | 71 | 294 | 2.68e-38 | 140 |
| Msa1435960 | MtrunA17_Chr5g0427191 | 31.765 | 255 | 164 | 4 | 108 | 357 | 86 | 335 | 4.78e-32 | 124 |
| Msa1435960 | MtrunA17_Chr5g0401271 | 30.537 | 298 | 173 | 9 | 23 | 304 | 13 | 292 | 7.75e-30 | 117 |
| Msa1435960 | MtrunA17_Chr8g0367661 | 32.906 | 234 | 136 | 6 | 110 | 333 | 108 | 330 | 1.04e-29 | 118 |
| Msa1435960 | MtrunA17_Chr3g0134781 | 40.523 | 153 | 87 | 2 | 74 | 226 | 34 | 182 | 6.88e-29 | 114 |
| Msa1435960 | MtrunA17_Chr2g0323361 | 30.040 | 253 | 147 | 9 | 125 | 362 | 64 | 301 | 4.07e-22 | 95.5 |
| Msa1435960 | MtrunA17_Chr2g0280941 | 32.484 | 157 | 99 | 3 | 112 | 268 | 43 | 192 | 1.94e-20 | 90.1 |
| Msa1435960 | MtrunA17_Chr4g0054011 | 29.208 | 202 | 133 | 6 | 73 | 268 | 31 | 228 | 4.35e-14 | 72.4 |
| Msa1435960 | MtrunA17_Chr1g0152871 | 29.814 | 161 | 95 | 5 | 114 | 266 | 131 | 281 | 2.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435960 | AT4G34160.1 | 56.026 | 307 | 110 | 6 | 1 | 307 | 1 | 282 | 1.19e-108 | 324 |
| Msa1435960 | AT5G67260.1 | 44.882 | 381 | 173 | 9 | 14 | 383 | 11 | 365 | 3.59e-93 | 284 |
| Msa1435960 | AT5G67260.2 | 45.576 | 373 | 166 | 9 | 14 | 375 | 11 | 357 | 5.64e-91 | 280 |
| Msa1435960 | AT3G50070.1 | 42.933 | 375 | 185 | 7 | 14 | 384 | 10 | 359 | 9.37e-90 | 275 |
| Msa1435960 | AT2G22490.1 | 35.931 | 231 | 136 | 3 | 110 | 333 | 97 | 322 | 1.67e-43 | 155 |
| Msa1435960 | AT2G22490.2 | 35.776 | 232 | 136 | 4 | 110 | 333 | 97 | 323 | 9.84e-42 | 150 |
| Msa1435960 | AT1G70210.1 | 38.424 | 203 | 125 | 0 | 110 | 312 | 82 | 284 | 1.42e-40 | 147 |
| Msa1435960 | AT5G65420.4 | 48.718 | 117 | 60 | 0 | 110 | 226 | 78 | 194 | 4.13e-35 | 130 |
| Msa1435960 | AT5G65420.2 | 49.138 | 116 | 59 | 0 | 110 | 225 | 78 | 193 | 4.26e-35 | 129 |
| Msa1435960 | AT5G65420.1 | 49.138 | 116 | 59 | 0 | 110 | 225 | 78 | 193 | 7.77e-35 | 130 |
| Msa1435960 | AT5G65420.3 | 45.238 | 126 | 59 | 1 | 110 | 225 | 78 | 203 | 9.35e-33 | 125 |
| Msa1435960 | AT5G10440.1 | 34.247 | 219 | 143 | 1 | 51 | 268 | 10 | 228 | 2.62e-30 | 118 |
| Msa1435960 | AT5G10440.2 | 37.143 | 175 | 110 | 0 | 51 | 225 | 10 | 184 | 1.18e-29 | 114 |
| Msa1435960 | AT4G03270.1 | 30.719 | 306 | 179 | 11 | 71 | 364 | 16 | 300 | 3.18e-24 | 101 |
| Msa1435960 | AT4G03270.2 | 31.250 | 304 | 179 | 12 | 71 | 364 | 16 | 299 | 1.18e-22 | 97.4 |
| Msa1435960 | AT4G37630.2 | 36.806 | 144 | 82 | 3 | 91 | 226 | 45 | 187 | 2.53e-21 | 92.8 |
| Msa1435960 | AT4G37630.3 | 36.986 | 146 | 81 | 4 | 91 | 226 | 45 | 189 | 9.11e-21 | 91.3 |
| Msa1435960 | AT4G37630.1 | 33.014 | 209 | 107 | 7 | 23 | 226 | 9 | 189 | 2.19e-20 | 91.3 |
| Msa1435960 | AT5G02110.1 | 25.357 | 280 | 184 | 9 | 106 | 378 | 74 | 335 | 5.13e-19 | 87.8 |
| Msa1435960 | AT5G02110.2 | 25.751 | 233 | 148 | 9 | 153 | 378 | 92 | 306 | 1.69e-14 | 73.9 |
Find 90 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATTCATGTAAATGAATT+TGG | 0.114219 | tig0027830:+38282 | None:intergenic |
| ATCATATTTCTATAATAAAT+TGG | 0.121107 | tig0027830:-38050 | Msa1435960:three_prime_UTR |
| CTTCTAGACCATACCAAATT+TGG | 0.122651 | tig0027830:-38083 | Msa1435960:three_prime_UTR |
| ATTTGTTTGTTTGAAATATT+TGG | 0.165317 | tig0027830:-37984 | Msa1435960:three_prime_UTR |
| CTTAAAGTCAATGCTCATTA+TGG | 0.232843 | tig0027830:-39775 | Msa1435960:CDS |
| GATATAAATATGTCCAAATT+TGG | 0.245540 | tig0027830:+38070 | None:intergenic |
| ATCTTCATTGGGAGTTTCTT+AGG | 0.261503 | tig0027830:-39363 | Msa1435960:CDS |
| TGAATTTGTCACCGATTAAC+AGG | 0.270558 | tig0027830:-38509 | Msa1435960:CDS |
| CTAACAAAAGCAGAGGTAAA+AGG | 0.274372 | tig0027830:+39944 | None:intergenic |
| TAATTTCTGATGAGTTAAAA+AGG | 0.280244 | tig0027830:-38213 | Msa1435960:three_prime_UTR |
| GATTGAAAACTAATCTTCAT+TGG | 0.293518 | tig0027830:-39375 | Msa1435960:CDS |
| ATGATATCTGTTTCATTTCA+AGG | 0.312964 | tig0027830:-38136 | Msa1435960:three_prime_UTR |
| AGATGATGATAGAGGATTAA+AGG | 0.316170 | tig0027830:-38242 | Msa1435960:three_prime_UTR |
| AACAACAAACTATGATATAT+TGG | 0.316538 | tig0027830:-39977 | Msa1435960:CDS |
| TAGAAAGAGTAGAGAGTATA+GGG | 0.317667 | tig0027830:+40332 | None:intergenic |
| CTTACAAATGCAAATAATTA+TGG | 0.328803 | tig0027830:-38693 | Msa1435960:CDS |
| CTACTATGATAAAATAATAT+TGG | 0.355346 | tig0027830:+37889 | None:intergenic |
| TTGCTGTTAACTATCTTGAT+AGG | 0.355913 | tig0027830:-39729 | Msa1435960:CDS |
| CTAGAAAGAGTAGAGAGTAT+AGG | 0.358472 | tig0027830:+40331 | None:intergenic |
| TGAAATGAAACAGATATCAT+AGG | 0.368633 | tig0027830:+38139 | None:intergenic |
| TTTATAGATTCAAGATTTGT+TGG | 0.378968 | tig0027830:-39115 | Msa1435960:intron |
| TTCTTGTTGAGTTATCTCTT+TGG | 0.382076 | tig0027830:+39876 | None:intergenic |
| AAGTGTGTTGTTGAAGTTGT+TGG | 0.394682 | tig0027830:+40097 | None:intergenic |
| TCATATTTCTATAATAAATT+GGG | 0.397018 | tig0027830:-38049 | Msa1435960:three_prime_UTR |
| AGATTCATGTAAATGAATTT+GGG | 0.403114 | tig0027830:+38283 | None:intergenic |
| TGATTCTGTCAACACTGAAA+TGG | 0.413211 | tig0027830:-39453 | Msa1435960:CDS |
| CACGTCGTGAAGCCGTTGAA+TGG | 0.426745 | tig0027830:-39801 | Msa1435960:CDS |
| TTCTTGGTCTTCTTAAACAC+AGG | 0.430266 | tig0027830:+38546 | None:intergenic |
| ATTGAAAACTAATCTTCATT+GGG | 0.430502 | tig0027830:-39374 | Msa1435960:CDS |
| TTTATTTAATCTAGTAAGAC+AGG | 0.433476 | tig0027830:-37865 | Msa1435960:three_prime_UTR |
| AAAGGACAGAAAACGGATAG+AGG | 0.440283 | tig0027830:+38444 | None:intergenic |
| TTCTAGATCACATTATAAGA+AGG | 0.447293 | tig0027830:-39402 | Msa1435960:CDS |
| AAATGAATTTGGGACATTGT+TGG | 0.449762 | tig0027830:+38293 | None:intergenic |
| CCGACAATGACCCTGTTAAT+CGG | 0.454527 | tig0027830:+38498 | None:intergenic |
| TATCATCACTCTGTTCAATC+TGG | 0.455099 | tig0027830:+39044 | None:intergenic |
| GATCACATTATAAGAAGGCT+TGG | 0.460558 | tig0027830:-39397 | Msa1435960:CDS |
| TTTGAGTGGACCATTTGGTT+GGG | 0.464110 | tig0027830:+37921 | None:intergenic |
| GTTTGAAATATTTGGATGGA+TGG | 0.468379 | tig0027830:-37976 | Msa1435960:three_prime_UTR |
| CAAAAGCTCCATTCTCTGAA+TGG | 0.472197 | tig0027830:+39474 | None:intergenic |
| ATTACGCCACTTGGACTACC+AGG | 0.474746 | tig0027830:+38642 | None:intergenic |
| GAAGGAGAAGTTGTAGATGA+AGG | 0.479700 | tig0027830:-40018 | Msa1435960:CDS |
| TAACAAAAGCAGAGGTAAAA+GGG | 0.491260 | tig0027830:+39945 | None:intergenic |
| AGATACTAAATATGTGTTTG+AGG | 0.495892 | tig0027830:-39503 | Msa1435960:CDS |
| AGACAGGAAGAAATAAAGAA+AGG | 0.496540 | tig0027830:-37849 | Msa1435960:three_prime_UTR |
| GGCAAAGACCATTCAGAGAA+TGG | 0.496737 | tig0027830:-39482 | Msa1435960:CDS |
| GACTTTAAGCATCCATTCAA+CGG | 0.507804 | tig0027830:+39789 | None:intergenic |
| AGAGTAGAGAGTATAGGGAG+AGG | 0.513215 | tig0027830:+40337 | None:intergenic |
| AGAAAAGAGTGTGTTGTCAC+TGG | 0.519215 | tig0027830:+39421 | None:intergenic |
| ATGATAGAGGATTAAAGGAA+TGG | 0.522983 | tig0027830:-38237 | Msa1435960:three_prime_UTR |
| ACAGCATCAATTACGCCACT+TGG | 0.527358 | tig0027830:+38633 | None:intergenic |
| TGAAATATTTGGATGGATGG+TGG | 0.528447 | tig0027830:-37973 | Msa1435960:three_prime_UTR |
| CCGATTAACAGGGTCATTGT+CGG | 0.532014 | tig0027830:-38498 | Msa1435960:CDS |
| TTTAAGAAGACCAAGAATCA+AGG | 0.533821 | tig0027830:-38540 | Msa1435960:CDS |
| ATTGAACAGAGTGATGATAA+TGG | 0.537100 | tig0027830:-39040 | Msa1435960:CDS |
| AAATATGTCCAAATTTGGTA+TGG | 0.537560 | tig0027830:+38075 | None:intergenic |
| CTGATGGTTCTAACGATTCG+TGG | 0.539073 | tig0027830:-38602 | Msa1435960:CDS |
| TGGTTGTGTTCCTTCTGTGT+TGG | 0.540643 | tig0027830:-39095 | Msa1435960:CDS |
| CAGTGGCAAGATGATGATAG+AGG | 0.542425 | tig0027830:-38250 | Msa1435960:three_prime_UTR |
| CTCTTCTTCACTGAAGAAGA+TGG | 0.544080 | tig0027830:-40145 | Msa1435960:exon |
| GAAATGAAACAGATATCATA+GGG | 0.549435 | tig0027830:+38140 | None:intergenic |
| AGATGTGCGACCCAACCAAA+TGG | 0.552472 | tig0027830:-37931 | Msa1435960:three_prime_UTR |
| TTTACATGAATCTCTTGAAG+AGG | 0.556584 | tig0027830:-38273 | Msa1435960:three_prime_UTR |
| CATTCAACGGCTTCACGACG+TGG | 0.556963 | tig0027830:+39802 | None:intergenic |
| AAATGGGAAGATGATGATGA+AGG | 0.560202 | tig0027830:-40036 | Msa1435960:CDS |
| AAGGACAGAAAACGGATAGA+GGG | 0.568780 | tig0027830:+38445 | None:intergenic |
| TGAATCTCTTGAAGAGGCAG+TGG | 0.568786 | tig0027830:-38267 | Msa1435960:three_prime_UTR |
| CATCTTCTTCAGTGAAGAAG+AGG | 0.570851 | tig0027830:+40146 | None:intergenic |
| AATATTTGGATGGATGGTGG+TGG | 0.572220 | tig0027830:-37970 | Msa1435960:three_prime_UTR |
| GTTTGTTTGAAATATTTGGA+TGG | 0.587629 | tig0027830:-37980 | Msa1435960:three_prime_UTR |
| ACAGAGAAGACAGAACAAAG+AGG | 0.595388 | tig0027830:-40243 | Msa1435960:five_prime_UTR |
| ATATTTGGATGGATGGTGGT+GGG | 0.598602 | tig0027830:-37969 | Msa1435960:three_prime_UTR |
| CGAAAGTATGAAGAAATCCC+TGG | 0.598980 | tig0027830:-38660 | Msa1435960:CDS |
| TTCTGTTCTAACAAAAGCAG+AGG | 0.599651 | tig0027830:+39937 | None:intergenic |
| AACATGCAACATTGTAGCAG+TGG | 0.604318 | tig0027830:+39072 | None:intergenic |
| CTTCTTAAACACAGGCTCTG+AGG | 0.608564 | tig0027830:+38554 | None:intergenic |
| ACTTGAAGGTCTAAGAGAAG+AGG | 0.611584 | tig0027830:+39604 | None:intergenic |
| GGTGATTGTGATGATGATGA+TGG | 0.615500 | tig0027830:+40118 | None:intergenic |
| GTAGCAGTGGCCAACACAGA+AGG | 0.618074 | tig0027830:+39085 | None:intergenic |
| TCAGTGAAGAAGAGGGTGTG+TGG | 0.620217 | tig0027830:+40154 | None:intergenic |
| AAGAGGAAAAGAGAGAGCGA+TGG | 0.620696 | tig0027830:-40226 | Msa1435960:five_prime_UTR |
| TTCTAACGATTCGTGGACAG+TGG | 0.621696 | tig0027830:-38595 | Msa1435960:CDS |
| TCTAACGATTCGTGGACAGT+GGG | 0.629045 | tig0027830:-38594 | Msa1435960:CDS |
| GCAACAAGCTGAATCATCCA+TGG | 0.629983 | tig0027830:+39673 | None:intergenic |
| TAATGTTCTCAAAATCAGCA+AGG | 0.638487 | tig0027830:-38993 | Msa1435960:intron |
| GAATTTGTCACCGATTAACA+GGG | 0.642593 | tig0027830:-38508 | Msa1435960:CDS |
| TTACGCCACTTGGACTACCA+GGG | 0.660070 | tig0027830:+38643 | None:intergenic |
| ATCTTCTTCAGTGAAGAAGA+GGG | 0.660634 | tig0027830:+40147 | None:intergenic |
| GAAATCCCTGGTAGTCCAAG+TGG | 0.669163 | tig0027830:-38648 | Msa1435960:CDS |
| ACAGAGTGATGATAATGGTG+TGG | 0.694988 | tig0027830:-39035 | Msa1435960:CDS |
| TCAACAAGAAACATATTACG+AGG | 0.716642 | tig0027830:-39863 | Msa1435960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTTAAAATAAAA+AGG | + | tig0027830:39884-39903 | None:intergenic | 0.0% |
| !!! | AAATTAAACATAAAGTATTA+AGG | + | tig0027830:39370-39389 | None:intergenic | 10.0% |
| !!! | AATAAAATATAGATCTTTTT+GGG | + | tig0027830:39923-39942 | None:intergenic | 10.0% |
| !!! | AAATAAAATATAGATCTTTT+TGG | + | tig0027830:39924-39943 | None:intergenic | 10.0% |
| !!! | ATCATATTTCTATAATAAAT+TGG | - | tig0027830:40257-40276 | Msa1435960:five_prime_UTR | 10.0% |
| !!! | TCATATTTCTATAATAAATT+GGG | - | tig0027830:40258-40277 | Msa1435960:five_prime_UTR | 10.0% |
| !!! | ATAAAATATAGATCTTTTTG+GGG | + | tig0027830:39922-39941 | None:intergenic | 15.0% |
| !!! | GATCTATATTTTATTTACTA+TGG | - | tig0027830:39928-39947 | Msa1435960:CDS | 15.0% |
| !!! | AATAAATTGGGAATAATTTT+TGG | - | tig0027830:40270-40289 | Msa1435960:five_prime_UTR | 15.0% |
| !!! | ATTTGTTTGTTTGAAATATT+TGG | - | tig0027830:40323-40342 | Msa1435960:five_prime_UTR | 15.0% |
| !! | CTACTATGATAAAATAATAT+TGG | + | tig0027830:40421-40440 | None:intergenic | 15.0% |
| !! | CTTTGTTCATTATAAAAAGA+AGG | + | tig0027830:38131-38150 | None:intergenic | 20.0% |
| !!! | CTTCTTTTTATAATGAACAA+AGG | - | tig0027830:38129-38148 | Msa1435960:three_prime_UTR | 20.0% |
| !! | AACAACAAACTATGATATAT+TGG | - | tig0027830:38330-38349 | Msa1435960:three_prime_UTR | 20.0% |
| !! | CAAAAACAAACATAAGAAAA+AGG | + | tig0027830:38773-38792 | None:intergenic | 20.0% |
| !!! | CTTATGTTTGTTTTTGTTAA+AGG | - | tig0027830:38777-38796 | Msa1435960:intron | 20.0% |
| !! | ATTGAAAACTAATCTTCATT+GGG | - | tig0027830:38933-38952 | Msa1435960:intron | 20.0% |
| !! | TTTATAGATTCAAGATTTGT+TGG | - | tig0027830:39192-39211 | Msa1435960:intron | 20.0% |
| !! | CTTACAAATGCAAATAATTA+TGG | - | tig0027830:39614-39633 | Msa1435960:CDS | 20.0% |
| !! | AAAATAAAAAGGACAGAAAA+CGG | + | tig0027830:39873-39892 | None:intergenic | 20.0% |
| !!! | TTTTGGGGTAATTTTTTATA+TGG | + | tig0027830:39907-39926 | None:intergenic | 20.0% |
| !! | AGATTCATGTAAATGAATTT+GGG | + | tig0027830:40027-40046 | None:intergenic | 20.0% |
| !! | TAATTTCTGATGAGTTAAAA+AGG | - | tig0027830:40094-40113 | Msa1435960:CDS | 20.0% |
| !! | GATATAAATATGTCCAAATT+TGG | + | tig0027830:40240-40259 | None:intergenic | 20.0% |
| !! | TTTATTTAATCTAGTAAGAC+AGG | - | tig0027830:40442-40461 | Msa1435960:five_prime_UTR | 20.0% |
| ! | AGATACTAAATATGTGTTTG+AGG | - | tig0027830:38804-38823 | Msa1435960:intron | 25.0% |
| ! | TTCTAGATCACATTATAAGA+AGG | - | tig0027830:38905-38924 | Msa1435960:intron | 25.0% |
| ! | GATTGAAAACTAATCTTCAT+TGG | - | tig0027830:38932-38951 | Msa1435960:intron | 25.0% |
| !!! | TGAAAGAGTACTAAAAATGT+TGG | + | tig0027830:39011-39030 | None:intergenic | 25.0% |
| ! | AATTTAATAGAACTACTCGA+TGG | - | tig0027830:39412-39431 | Msa1435960:CDS | 25.0% |
| ! | ATTTAATAGAACTACTCGAT+GGG | - | tig0027830:39413-39432 | Msa1435960:CDS | 25.0% |
| ! | TAAACAAAAAACACATGCAA+AGG | + | tig0027830:39555-39574 | None:intergenic | 25.0% |
| ! | GAGATTCATGTAAATGAATT+TGG | + | tig0027830:40028-40047 | None:intergenic | 25.0% |
| ! | GAAATGAAACAGATATCATA+GGG | + | tig0027830:40170-40189 | None:intergenic | 25.0% |
| ! | TGAAATGAAACAGATATCAT+AGG | + | tig0027830:40171-40190 | None:intergenic | 25.0% |
| ! | ATGATATCTGTTTCATTTCA+AGG | - | tig0027830:40171-40190 | Msa1435960:five_prime_UTR | 25.0% |
| ! | AAATATGTCCAAATTTGGTA+TGG | + | tig0027830:40235-40254 | None:intergenic | 25.0% |
| !!! | GGAATAATTTTTGGTCATAT+GGG | - | tig0027830:40279-40298 | Msa1435960:five_prime_UTR | 25.0% |
| !! | GTTTGTTTGAAATATTTGGA+TGG | - | tig0027830:40327-40346 | Msa1435960:five_prime_UTR | 25.0% |
| ! | TAGAAAGAGTAGAGAGTATA+GGG | + | tig0027830:37978-37997 | None:intergenic | 30.0% |
| ACTGTGATGAAGAAGAAAAA+TGG | - | tig0027830:38254-38273 | Msa1435960:three_prime_UTR | 30.0% | |
| CTGTGATGAAGAAGAAAAAT+GGG | - | tig0027830:38255-38274 | Msa1435960:three_prime_UTR | 30.0% | |
| TAACAAAAGCAGAGGTAAAA+GGG | + | tig0027830:38365-38384 | None:intergenic | 30.0% | |
| TTCTTGTTGAGTTATCTCTT+TGG | + | tig0027830:38434-38453 | None:intergenic | 30.0% | |
| TCAACAAGAAACATATTACG+AGG | - | tig0027830:38444-38463 | Msa1435960:three_prime_UTR | 30.0% | |
| CTTAAAGTCAATGCTCATTA+TGG | - | tig0027830:38532-38551 | Msa1435960:CDS | 30.0% | |
| ! | TTGCTGTTAACTATCTTGAT+AGG | - | tig0027830:38578-38597 | Msa1435960:CDS | 30.0% |
| !! | ATGGTTTCTCTTTTTGGAAA+TGG | + | tig0027830:38618-38637 | None:intergenic | 30.0% |
| ATTTCCAAAAAGAGAAACCA+TGG | - | tig0027830:38617-38636 | Msa1435960:CDS | 30.0% | |
| TTAGAAGATAACGTACTTGA+AGG | + | tig0027830:38720-38739 | None:intergenic | 30.0% | |
| ! | CTTCTTCTATCTGTACTTTT+AGG | - | tig0027830:38979-38998 | Msa1435960:intron | 30.0% |
| ATTGAACAGAGTGATGATAA+TGG | - | tig0027830:39267-39286 | Msa1435960:intron | 30.0% | |
| TAATGTTCTCAAAATCAGCA+AGG | - | tig0027830:39314-39333 | Msa1435960:intron | 30.0% | |
| !!! | TGCATGTGTTTTTTGTTTAC+AGG | - | tig0027830:39556-39575 | Msa1435960:intron | 30.0% |
| TTTAAGAAGACCAAGAATCA+AGG | - | tig0027830:39767-39786 | Msa1435960:CDS | 30.0% | |
| ! | CATATTTTGTCCTTGATTCT+TGG | + | tig0027830:39780-39799 | None:intergenic | 30.0% |
| ! | AAATGAATTTGGGACATTGT+TGG | + | tig0027830:40017-40036 | None:intergenic | 30.0% |
| TTTACATGAATCTCTTGAAG+AGG | - | tig0027830:40034-40053 | Msa1435960:CDS | 30.0% | |
| AGATGATGATAGAGGATTAA+AGG | - | tig0027830:40065-40084 | Msa1435960:CDS | 30.0% | |
| ATGATAGAGGATTAAAGGAA+TGG | - | tig0027830:40070-40089 | Msa1435960:CDS | 30.0% | |
| TCTGATGAGTTAAAAAGGAA+AGG | - | tig0027830:40099-40118 | Msa1435960:CDS | 30.0% | |
| TAAAAAGGAAAGGACAAAGT+TGG | - | tig0027830:40109-40128 | Msa1435960:CDS | 30.0% | |
| !!! | GGGAATAATTTTTGGTCATA+TGG | - | tig0027830:40278-40297 | Msa1435960:five_prime_UTR | 30.0% |
| ! | GTTTGAAATATTTGGATGGA+TGG | - | tig0027830:40331-40350 | Msa1435960:five_prime_UTR | 30.0% |
| ! | ATTGGTAAAGAGATTTTGAG+TGG | + | tig0027830:40403-40422 | None:intergenic | 30.0% |
| AGACAGGAAGAAATAAAGAA+AGG | - | tig0027830:40458-40477 | Msa1435960:five_prime_UTR | 30.0% | |
| ! | GTGATGATTTTCATCTGAGT+GGG | + | tig0027830:37929-37948 | None:intergenic | 35.0% |
| ! | AGTGATGATTTTCATCTGAG+TGG | + | tig0027830:37930-37949 | None:intergenic | 35.0% |
| ! | CTAGAAAGAGTAGAGAGTAT+AGG | + | tig0027830:37979-37998 | None:intergenic | 35.0% |
| ATCTTCTTCAGTGAAGAAGA+GGG | + | tig0027830:38163-38182 | None:intergenic | 35.0% | |
| ! | AAGTGTGTTGTTGAAGTTGT+TGG | + | tig0027830:38213-38232 | None:intergenic | 35.0% |
| ! | AAATGGGAAGATGATGATGA+AGG | - | tig0027830:38271-38290 | Msa1435960:three_prime_UTR | 35.0% |
| CTAACAAAAGCAGAGGTAAA+AGG | + | tig0027830:38366-38385 | None:intergenic | 35.0% | |
| TTCTGTTCTAACAAAAGCAG+AGG | + | tig0027830:38373-38392 | None:intergenic | 35.0% | |
| GACTTTAAGCATCCATTCAA+CGG | + | tig0027830:38521-38540 | None:intergenic | 35.0% | |
| ! | TCATCCATGGTTTCTCTTTT+TGG | + | tig0027830:38624-38643 | None:intergenic | 35.0% |
| TGATTCTGTCAACACTGAAA+TGG | - | tig0027830:38854-38873 | Msa1435960:intron | 35.0% | |
| GATCACATTATAAGAAGGCT+TGG | - | tig0027830:38910-38929 | Msa1435960:intron | 35.0% | |
| ATCTTCATTGGGAGTTTCTT+AGG | - | tig0027830:38944-38963 | Msa1435960:intron | 35.0% | |
| TATCATCACTCTGTTCAATC+TGG | + | tig0027830:39266-39285 | None:intergenic | 35.0% | |
| GCTCATACACAATACACATA+TGG | + | tig0027830:39440-39459 | None:intergenic | 35.0% | |
| !!! | GATGCTGTTTTTAGTTCTGA+TGG | - | tig0027830:39689-39708 | Msa1435960:CDS | 35.0% |
| ! | TTCTTGGTCTTCTTAAACAC+AGG | + | tig0027830:39764-39783 | None:intergenic | 35.0% |
| ! | TGAATTTGTCACCGATTAAC+AGG | - | tig0027830:39798-39817 | Msa1435960:CDS | 35.0% |
| ! | GAATTTGTCACCGATTAACA+GGG | - | tig0027830:39799-39818 | Msa1435960:CDS | 35.0% |
| ! | AAAACGGATAGAGGGTTTTA+AGG | + | tig0027830:39857-39876 | None:intergenic | 35.0% |
| CTTCTAGACCATACCAAATT+TGG | - | tig0027830:40224-40243 | Msa1435960:five_prime_UTR | 35.0% | |
| TGAAATATTTGGATGGATGG+TGG | - | tig0027830:40334-40353 | Msa1435960:five_prime_UTR | 35.0% | |
| ACAGAGAAGACAGAACAAAG+AGG | - | tig0027830:38064-38083 | Msa1435960:three_prime_UTR | 40.0% | |
| CATCTTCTTCAGTGAAGAAG+AGG | + | tig0027830:38164-38183 | None:intergenic | 40.0% | |
| CTCTTCTTCACTGAAGAAGA+TGG | - | tig0027830:38162-38181 | Msa1435960:three_prime_UTR | 40.0% | |
| ! | GGTGATTGTGATGATGATGA+TGG | + | tig0027830:38192-38211 | None:intergenic | 40.0% |
| GAAGGAGAAGTTGTAGATGA+AGG | - | tig0027830:38289-38308 | Msa1435960:three_prime_UTR | 40.0% | |
| ACTTGAAGGTCTAAGAGAAG+AGG | + | tig0027830:38706-38725 | None:intergenic | 40.0% | |
| CAAAAGCTCCATTCTCTGAA+TGG | + | tig0027830:38836-38855 | None:intergenic | 40.0% | |
| ! | AGAAAAGAGTGTGTTGTCAC+TGG | + | tig0027830:38889-38908 | None:intergenic | 40.0% |
| AACATGCAACATTGTAGCAG+TGG | + | tig0027830:39238-39257 | None:intergenic | 40.0% | |
| !! | ACAGAGTGATGATAATGGTG+TGG | - | tig0027830:39272-39291 | Msa1435960:intron | 40.0% |
| ! | CGAAAGTATGAAGAAATCCC+TGG | - | tig0027830:39647-39666 | Msa1435960:CDS | 40.0% |
| AAGGACAGAAAACGGATAGA+GGG | + | tig0027830:39865-39884 | None:intergenic | 40.0% | |
| AAAGGACAGAAAACGGATAG+AGG | + | tig0027830:39866-39885 | None:intergenic | 40.0% | |
| ! | AATATTTGGATGGATGGTGG+TGG | - | tig0027830:40337-40356 | Msa1435960:five_prime_UTR | 40.0% |
| ! | ATATTTGGATGGATGGTGGT+GGG | - | tig0027830:40338-40357 | Msa1435960:five_prime_UTR | 40.0% |
| TTTGAGTGGACCATTTGGTT+GGG | + | tig0027830:40389-40408 | None:intergenic | 40.0% | |
| !! | TTTTGAGTGGACCATTTGGT+TGG | + | tig0027830:40390-40409 | None:intergenic | 40.0% |
| !! | GAGATTTTGAGTGGACCATT+TGG | + | tig0027830:40394-40413 | None:intergenic | 40.0% |
| ! | AGAGTAGAGAGTATAGGGAG+AGG | + | tig0027830:37973-37992 | None:intergenic | 45.0% |
| AAGAGGAAAAGAGAGAGCGA+TGG | - | tig0027830:38081-38100 | Msa1435960:three_prime_UTR | 45.0% | |
| GCAACAAGCTGAATCATCCA+TGG | + | tig0027830:38637-38656 | None:intergenic | 45.0% | |
| GGCAAAGACCATTCAGAGAA+TGG | - | tig0027830:38825-38844 | Msa1435960:intron | 45.0% | |
| TGGTTGTGTTCCTTCTGTGT+TGG | - | tig0027830:39212-39231 | Msa1435960:intron | 45.0% | |
| ACAGCATCAATTACGCCACT+TGG | + | tig0027830:39677-39696 | None:intergenic | 45.0% | |
| !! | CTGATGGTTCTAACGATTCG+TGG | - | tig0027830:39705-39724 | Msa1435960:CDS | 45.0% |
| TTCTAACGATTCGTGGACAG+TGG | - | tig0027830:39712-39731 | Msa1435960:CDS | 45.0% | |
| TCTAACGATTCGTGGACAGT+GGG | - | tig0027830:39713-39732 | Msa1435960:CDS | 45.0% | |
| CTTCTTAAACACAGGCTCTG+AGG | + | tig0027830:39756-39775 | None:intergenic | 45.0% | |
| CCGACAATGACCCTGTTAAT+CGG | + | tig0027830:39812-39831 | None:intergenic | 45.0% | |
| CCGATTAACAGGGTCATTGT+CGG | - | tig0027830:39809-39828 | Msa1435960:CDS | 45.0% | |
| !!! | GTTTTAAGGAGAGGTTGCAG+TGG | + | tig0027830:39843-39862 | None:intergenic | 45.0% |
| !!! | GGATAGAGGGTTTTAAGGAG+AGG | + | tig0027830:39852-39871 | None:intergenic | 45.0% |
| TGAATCTCTTGAAGAGGCAG+TGG | - | tig0027830:40040-40059 | Msa1435960:CDS | 45.0% | |
| CAGTGGCAAGATGATGATAG+AGG | - | tig0027830:40057-40076 | Msa1435960:CDS | 45.0% | |
| ! | TCAGTGAAGAAGAGGGTGTG+TGG | + | tig0027830:38156-38175 | None:intergenic | 50.0% |
| GCAAGGTCAGTAGTAGTAGC+TGG | - | tig0027830:39331-39350 | Msa1435960:CDS | 50.0% | |
| GAAATCCCTGGTAGTCCAAG+TGG | - | tig0027830:39659-39678 | Msa1435960:CDS | 50.0% | |
| TTACGCCACTTGGACTACCA+GGG | + | tig0027830:39667-39686 | None:intergenic | 50.0% | |
| ATTACGCCACTTGGACTACC+AGG | + | tig0027830:39668-39687 | None:intergenic | 50.0% | |
| AGATGTGCGACCCAACCAAA+TGG | - | tig0027830:40376-40395 | Msa1435960:five_prime_UTR | 50.0% | |
| CATTCAACGGCTTCACGACG+TGG | + | tig0027830:38508-38527 | None:intergenic | 55.0% | |
| CACGTCGTGAAGCCGTTGAA+TGG | - | tig0027830:38506-38525 | Msa1435960:CDS | 55.0% | |
| GTAGCAGTGGCCAACACAGA+AGG | + | tig0027830:39225-39244 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027830 | gene | 37845 | 40484 | 37845 | ID=Msa1435960;Name=Msa1435960 |
| tig0027830 | mRNA | 37845 | 40484 | 37845 | ID=Msa1435960-mRNA-1;Parent=Msa1435960;Name=Msa1435960-mRNA-1;_AED=0.04;_eAED=0.04;_QI=336|1|1|1|1|1|4|625|387 |
| tig0027830 | exon | 37845 | 38751 | 37845 | ID=Msa1435960-mRNA-1:exon:9985;Parent=Msa1435960-mRNA-1 |
| tig0027830 | exon | 38994 | 39130 | 38994 | ID=Msa1435960-mRNA-1:exon:9984;Parent=Msa1435960-mRNA-1 |
| tig0027830 | exon | 39329 | 39530 | 39329 | ID=Msa1435960-mRNA-1:exon:9983;Parent=Msa1435960-mRNA-1 |
| tig0027830 | exon | 39606 | 40484 | 39606 | ID=Msa1435960-mRNA-1:exon:9982;Parent=Msa1435960-mRNA-1 |
| tig0027830 | five_prime_UTR | 40149 | 40484 | 40149 | ID=Msa1435960-mRNA-1:five_prime_utr;Parent=Msa1435960-mRNA-1 |
| tig0027830 | CDS | 39606 | 40148 | 39606 | ID=Msa1435960-mRNA-1:cds;Parent=Msa1435960-mRNA-1 |
| tig0027830 | CDS | 39329 | 39530 | 39329 | ID=Msa1435960-mRNA-1:cds;Parent=Msa1435960-mRNA-1 |
| tig0027830 | CDS | 38994 | 39130 | 38994 | ID=Msa1435960-mRNA-1:cds;Parent=Msa1435960-mRNA-1 |
| tig0027830 | CDS | 38470 | 38751 | 38470 | ID=Msa1435960-mRNA-1:cds;Parent=Msa1435960-mRNA-1 |
| tig0027830 | three_prime_UTR | 37845 | 38469 | 37845 | ID=Msa1435960-mRNA-1:three_prime_utr;Parent=Msa1435960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
