Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178450 | sp|P42753|CCD31_ARATH | 56.026 | 307 | 110 | 6 | 1 | 307 | 1 | 282 | 1.17e-107 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178450 | Q40338 | 99.483 | 387 | 1 | 1 | 1 | 387 | 1 | 386 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa0178450 | 0.835621 | 1.508740e-56 | -8.615850e-47 |
| Msa0016040 | Msa0178450 | 0.807076 | 6.031884e-50 | -8.615850e-47 |
| Msa0020540 | Msa0178450 | 0.832864 | 7.412243e-56 | -8.615850e-47 |
| Msa0027280 | Msa0178450 | 0.802739 | 4.863674e-49 | -8.615850e-47 |
| Msa0032970 | Msa0178450 | 0.800917 | 1.151023e-48 | -8.615850e-47 |
| Msa0032980 | Msa0178450 | 0.811700 | 6.142032e-51 | -8.615850e-47 |
| Msa0037680 | Msa0178450 | 0.819433 | 1.164188e-52 | -8.615850e-47 |
| Msa0040640 | Msa0178450 | 0.805568 | 1.253885e-49 | -8.615850e-47 |
| Msa0042640 | Msa0178450 | 0.891251 | 4.709656e-74 | -8.615850e-47 |
| Msa0044780 | Msa0178450 | -0.805634 | 1.214275e-49 | -8.615850e-47 |
| Msa0048510 | Msa0178450 | 0.809348 | 1.978291e-50 | -8.615850e-47 |
| Msa0050660 | Msa0178450 | 0.803026 | 4.242295e-49 | -8.615850e-47 |
| Msa0050700 | Msa0178450 | 0.806743 | 7.091794e-50 | -8.615850e-47 |
| Msa0050790 | Msa0178450 | 0.800037 | 1.738823e-48 | -8.615850e-47 |
| Msa0057840 | Msa0178450 | 0.801838 | 7.453299e-49 | -8.615850e-47 |
| Msa0062340 | Msa0178450 | 0.801550 | 8.538608e-49 | -8.615850e-47 |
| Msa0067060 | Msa0178450 | 0.816497 | 5.365667e-52 | -8.615850e-47 |
| Msa0068150 | Msa0178450 | 0.813329 | 2.704356e-51 | -8.615850e-47 |
| Msa0075530 | Msa0178450 | 0.841292 | 5.190264e-58 | -8.615850e-47 |
| Msa0077340 | Msa0178450 | 0.834739 | 2.518213e-56 | -8.615850e-47 |
| Msa0077560 | Msa0178450 | 0.834382 | 3.095199e-56 | -8.615850e-47 |
| Msa0078130 | Msa0178450 | 0.817577 | 3.067519e-52 | -8.615850e-47 |
| Msa0089460 | Msa0178450 | 0.932593 | 6.751138e-95 | -8.615850e-47 |
| Msa0091350 | Msa0178450 | 0.813020 | 3.161781e-51 | -8.615850e-47 |
| Msa0094570 | Msa0178450 | 0.835140 | 1.995387e-56 | -8.615850e-47 |
| Msa0094790 | Msa0178450 | 0.862763 | 4.025166e-64 | -8.615850e-47 |
| Msa0102240 | Msa0178450 | 0.824765 | 6.760606e-54 | -8.615850e-47 |
| Msa0112670 | Msa0178450 | 0.818353 | 2.049242e-52 | -8.615850e-47 |
| Msa0115550 | Msa0178450 | 0.801904 | 7.226136e-49 | -8.615850e-47 |
| Msa0122330 | Msa0178450 | 0.822692 | 2.067155e-53 | -8.615850e-47 |
| Msa0123070 | Msa0178450 | 0.819135 | 1.361164e-52 | -8.615850e-47 |
| Msa0125360 | Msa0178450 | 0.835958 | 1.238934e-56 | -8.615850e-47 |
| Msa0140130 | Msa0178450 | 0.857081 | 2.081267e-62 | -8.615850e-47 |
| Msa0140200 | Msa0178450 | 0.801946 | 7.081208e-49 | -8.615850e-47 |
| Msa0140380 | Msa0178450 | 0.813333 | 2.699317e-51 | -8.615850e-47 |
| Msa0141640 | Msa0178450 | 0.813736 | 2.200837e-51 | -8.615850e-47 |
| Msa0156050 | Msa0178450 | 0.850467 | 1.666143e-60 | -8.615850e-47 |
| Msa0156090 | Msa0178450 | 0.848420 | 6.201474e-60 | -8.615850e-47 |
| Msa0159590 | Msa0178450 | 0.829630 | 4.622615e-55 | -8.615850e-47 |
| Msa0159620 | Msa0178450 | 0.811323 | 7.415315e-51 | -8.615850e-47 |
| Msa0168050 | Msa0178450 | 0.832103 | 1.143972e-55 | -8.615850e-47 |
| Msa0170070 | Msa0178450 | 0.808117 | 3.626339e-50 | -8.615850e-47 |
| Msa0174290 | Msa0178450 | 0.804242 | 2.373582e-49 | -8.615850e-47 |
| Msa0178450 | Msa0188610 | 0.819786 | 9.671314e-53 | -8.615850e-47 |
| Msa0178450 | Msa0188620 | 0.818377 | 2.023765e-52 | -8.615850e-47 |
| Msa0178450 | Msa0190730 | 0.811663 | 6.253948e-51 | -8.615850e-47 |
| Msa0178450 | Msa0230780 | 0.805452 | 1.325806e-49 | -8.615850e-47 |
| Msa0178450 | Msa0230800 | 0.802347 | 5.857066e-49 | -8.615850e-47 |
| Msa0178450 | Msa0230840 | 0.838909 | 2.173524e-57 | -8.615850e-47 |
| Msa0178450 | Msa0230870 | 0.801280 | 9.702361e-49 | -8.615850e-47 |
| Msa0178450 | Msa0232760 | 0.822529 | 2.256639e-53 | -8.615850e-47 |
| Msa0178450 | Msa0269210 | 0.835372 | 1.743522e-56 | -8.615850e-47 |
| Msa0178450 | Msa0270280 | 0.813142 | 2.973575e-51 | -8.615850e-47 |
| Msa0178450 | Msa0272260 | 0.810089 | 1.371036e-50 | -8.615850e-47 |
| Msa0178450 | Msa0284800 | 0.809637 | 1.714888e-50 | -8.615850e-47 |
| Msa0178450 | Msa0307670 | 0.813650 | 2.298812e-51 | -8.615850e-47 |
| Msa0178450 | Msa0347530 | 0.814183 | 1.754022e-51 | -8.615850e-47 |
| Msa0178450 | Msa0367150 | 0.801647 | 8.156887e-49 | -8.615850e-47 |
| Msa0178450 | Msa0367690 | 0.849599 | 2.916917e-60 | -8.615850e-47 |
| Msa0178450 | Msa0368860 | 0.801882 | 7.301873e-49 | -8.615850e-47 |
| Msa0178450 | Msa0373170 | 0.809853 | 1.540877e-50 | -8.615850e-47 |
| Msa0178450 | Msa0373500 | 0.837032 | 6.604195e-57 | -8.615850e-47 |
| Msa0178450 | Msa0381730 | 0.800603 | 1.333903e-48 | -8.615850e-47 |
| Msa0178450 | Msa0383000 | 0.829341 | 5.434341e-55 | -8.615850e-47 |
| Msa0178450 | Msa0409830 | 0.800548 | 1.368589e-48 | -8.615850e-47 |
| Msa0178450 | Msa0415450 | 0.854156 | 1.484961e-61 | -8.615850e-47 |
| Msa0178450 | Msa0416160 | 0.812189 | 4.804539e-51 | -8.615850e-47 |
| Msa0178450 | Msa0421750 | 0.800106 | 1.684046e-48 | -8.615850e-47 |
| Msa0178450 | Msa0432010 | 0.821990 | 3.009699e-53 | -8.615850e-47 |
| Msa0178450 | Msa0433150 | 0.827311 | 1.677611e-54 | -8.615850e-47 |
| Msa0178450 | Msa0433760 | 0.802860 | 4.589998e-49 | -8.615850e-47 |
| Msa0178450 | Msa0436910 | 0.802241 | 6.158686e-49 | -8.615850e-47 |
| Msa0178450 | Msa0460070 | 0.854601 | 1.104414e-61 | -8.615850e-47 |
| Msa0178450 | Msa0462780 | 0.807645 | 4.568712e-50 | -8.615850e-47 |
| Msa0178450 | Msa0466520 | 0.808770 | 2.630195e-50 | -8.615850e-47 |
| Msa0178450 | Msa0467690 | 0.808555 | 2.923925e-50 | -8.615850e-47 |
| Msa0178450 | Msa0468620 | 0.837636 | 4.625037e-57 | -8.615850e-47 |
| Msa0178450 | Msa0481890 | 0.813381 | 2.633829e-51 | -8.615850e-47 |
| Msa0178450 | Msa0513080 | 0.811812 | 5.806240e-51 | -8.615850e-47 |
| Msa0178450 | Msa0514020 | 0.804121 | 2.514466e-49 | -8.615850e-47 |
| Msa0178450 | Msa0514500 | 0.838801 | 2.317372e-57 | -8.615850e-47 |
| Msa0178450 | Msa0520260 | 0.807931 | 3.971613e-50 | -8.615850e-47 |
| Msa0178450 | Msa0520870 | 0.818085 | 2.355690e-52 | -8.615850e-47 |
| Msa0178450 | Msa0521320 | 0.803573 | 3.268324e-49 | -8.615850e-47 |
| Msa0178450 | Msa0521680 | 0.814486 | 1.503067e-51 | -8.615850e-47 |
| Msa0178450 | Msa0524520 | 0.811051 | 8.495690e-51 | -8.615850e-47 |
| Msa0178450 | Msa0527850 | 0.811017 | 8.638354e-51 | -8.615850e-47 |
| Msa0178450 | Msa0529030 | 0.844730 | 6.309856e-59 | -8.615850e-47 |
| Msa0178450 | Msa0531960 | 0.825851 | 3.741016e-54 | -8.615850e-47 |
| Msa0178450 | Msa0561560 | 0.818163 | 2.262692e-52 | -8.615850e-47 |
| Msa0178450 | Msa0563940 | 0.816665 | 4.918021e-52 | -8.615850e-47 |
| Msa0178450 | Msa0566290 | 0.802941 | 4.418118e-49 | -8.615850e-47 |
| Msa0178450 | Msa0570010 | 0.811993 | 5.301294e-51 | -8.615850e-47 |
| Msa0178450 | Msa0580200 | 0.816512 | 5.322538e-52 | -8.615850e-47 |
| Msa0178450 | Msa0580810 | 0.804733 | 1.875015e-49 | -8.615850e-47 |
| Msa0178450 | Msa0586200 | 0.800365 | 1.491619e-48 | -8.615850e-47 |
| Msa0178450 | Msa0606100 | 0.813102 | 3.033363e-51 | -8.615850e-47 |
| Msa0178450 | Msa0607800 | 0.809420 | 1.908847e-50 | -8.615850e-47 |
| Msa0178450 | Msa0620500 | 0.806899 | 6.573852e-50 | -8.615850e-47 |
| Msa0178450 | Msa0621710 | 0.843208 | 1.614249e-58 | -8.615850e-47 |
| Msa0178450 | Msa0625620 | 0.810482 | 1.127984e-50 | -8.615850e-47 |
| Msa0178450 | Msa0648040 | 0.806399 | 8.384550e-50 | -8.615850e-47 |
| Msa0178450 | Msa0652710 | 0.825847 | 3.748768e-54 | -8.615850e-47 |
| Msa0178450 | Msa0654740 | 0.811750 | 5.987726e-51 | -8.615850e-47 |
| Msa0178450 | Msa0657700 | 0.816688 | 4.862182e-52 | -8.615850e-47 |
| Msa0178450 | Msa0661480 | 0.804278 | 2.332369e-49 | -8.615850e-47 |
| Msa0178450 | Msa0662820 | 0.801671 | 8.066524e-49 | -8.615850e-47 |
| Msa0178450 | Msa0666700 | 0.831174 | 1.938762e-55 | -8.615850e-47 |
| Msa0178450 | Msa0668900 | 0.803245 | 3.821554e-49 | -8.615850e-47 |
| Msa0178450 | Msa0687090 | 0.810643 | 1.040966e-50 | -8.615850e-47 |
| Msa0178450 | Msa0690740 | 0.805762 | 1.141396e-49 | -8.615850e-47 |
| Msa0178450 | Msa0691270 | 0.807169 | 5.762863e-50 | -8.615850e-47 |
| Msa0178450 | Msa0693890 | 0.834837 | 2.378530e-56 | -8.615850e-47 |
| Msa0178450 | Msa0698730 | 0.821080 | 4.882112e-53 | -8.615850e-47 |
| Msa0178450 | Msa0702810 | 0.812703 | 3.710323e-51 | -8.615850e-47 |
| Msa0178450 | Msa0709440 | 0.816207 | 6.229153e-52 | -8.615850e-47 |
| Msa0178450 | Msa0714520 | 0.803809 | 2.920159e-49 | -8.615850e-47 |
| Msa0178450 | Msa0716480 | 0.837907 | 3.940787e-57 | -8.615850e-47 |
| Msa0178450 | Msa0716890 | 0.810992 | 8.746596e-51 | -8.615850e-47 |
| Msa0178450 | Msa0717900 | 0.836224 | 1.060611e-56 | -8.615850e-47 |
| Msa0178450 | Msa0719270 | 0.865066 | 7.731916e-65 | -8.615850e-47 |
| Msa0178450 | Msa0728780 | 0.803732 | 3.028643e-49 | -8.615850e-47 |
| Msa0178450 | Msa0734250 | 0.840857 | 6.754522e-58 | -8.615850e-47 |
| Msa0178450 | Msa0740710 | 0.832415 | 9.577481e-56 | -8.615850e-47 |
| Msa0178450 | Msa0743440 | 0.821710 | 3.493110e-53 | -8.615850e-47 |
| Msa0178450 | Msa0760970 | 0.832388 | 9.725565e-56 | -8.615850e-47 |
| Msa0178450 | Msa0773630 | 0.828390 | 9.233762e-55 | -8.615850e-47 |
| Msa0178450 | Msa0778600 | 0.845354 | 4.278715e-59 | -8.615850e-47 |
| Msa0178450 | Msa0780910 | 0.823729 | 1.184214e-53 | -8.615850e-47 |
| Msa0178450 | Msa0792370 | 0.809566 | 1.775884e-50 | -8.615850e-47 |
| Msa0178450 | Msa0805680 | 0.814126 | 1.805424e-51 | -8.615850e-47 |
| Msa0178450 | Msa0811020 | 0.827294 | 1.693848e-54 | -8.615850e-47 |
| Msa0178450 | Msa0813160 | 0.813352 | 2.673282e-51 | -8.615850e-47 |
| Msa0178450 | Msa0815970 | 0.840218 | 9.925924e-58 | -8.615850e-47 |
| Msa0178450 | Msa0816080 | 0.810489 | 1.123625e-50 | -8.615850e-47 |
| Msa0178450 | Msa0818130 | 0.801774 | 7.682662e-49 | -8.615850e-47 |
| Msa0178450 | Msa0821160 | 0.814804 | 1.278179e-51 | -8.615850e-47 |
| Msa0178450 | Msa0828970 | 0.817084 | 3.960737e-52 | -8.615850e-47 |
| Msa0178450 | Msa0837460 | 0.844253 | 8.475010e-59 | -8.615850e-47 |
| Msa0178450 | Msa0840520 | 0.850557 | 1.572366e-60 | -8.615850e-47 |
| Msa0178450 | Msa0841590 | 0.838573 | 2.653956e-57 | -8.615850e-47 |
| Msa0178450 | Msa0863620 | 0.814462 | 1.521601e-51 | -8.615850e-47 |
| Msa0178450 | Msa0866530 | 0.837220 | 5.911538e-57 | -8.615850e-47 |
| Msa0178450 | Msa0879920 | 0.823570 | 1.290382e-53 | -8.615850e-47 |
| Msa0178450 | Msa0900760 | 0.809228 | 2.098524e-50 | -8.615850e-47 |
| Msa0178450 | Msa0909760 | 0.828802 | 7.342969e-55 | -8.615850e-47 |
| Msa0178450 | Msa0931590 | 0.828219 | 1.015240e-54 | -8.615850e-47 |
| Msa0178450 | Msa0935740 | 0.808751 | 2.655247e-50 | -8.615850e-47 |
| Msa0178450 | Msa0972740 | 0.816324 | 5.864679e-52 | -8.615850e-47 |
| Msa0178450 | Msa1002640 | 0.813620 | 2.334452e-51 | -8.615850e-47 |
| Msa0178450 | Msa1035570 | 0.805032 | 1.623731e-49 | -8.615850e-47 |
| Msa0178450 | Msa1035610 | 0.803405 | 3.541154e-49 | -8.615850e-47 |
| Msa0178450 | Msa1072940 | 0.807429 | 5.077236e-50 | -8.615850e-47 |
| Msa0178450 | Msa1076020 | 0.808630 | 2.817448e-50 | -8.615850e-47 |
| Msa0178450 | Msa1078880 | 0.832318 | 1.012197e-55 | -8.615850e-47 |
| Msa0178450 | Msa1078970 | 0.830945 | 2.206723e-55 | -8.615850e-47 |
| Msa0178450 | Msa1078990 | 0.802309 | 5.964302e-49 | -8.615850e-47 |
| Msa0178450 | Msa1082380 | 0.806927 | 6.484097e-50 | -8.615850e-47 |
| Msa0178450 | Msa1084530 | 0.819749 | 9.865196e-53 | -8.615850e-47 |
| Msa0178450 | Msa1114630 | 0.800199 | 1.612146e-48 | -8.615850e-47 |
| Msa0178450 | Msa1116660 | 0.823560 | 1.297175e-53 | -8.615850e-47 |
| Msa0178450 | Msa1116740 | 0.821023 | 5.031672e-53 | -8.615850e-47 |
| Msa0178450 | Msa1123970 | 0.800030 | 1.744700e-48 | -8.615850e-47 |
| Msa0178450 | Msa1124470 | 0.800667 | 1.294284e-48 | -8.615850e-47 |
| Msa0178450 | Msa1125820 | 0.821872 | 3.204583e-53 | -8.615850e-47 |
| Msa0178450 | Msa1125990 | 0.821895 | 3.166449e-53 | -8.615850e-47 |
| Msa0178450 | Msa1127280 | 0.801487 | 8.798754e-49 | -8.615850e-47 |
| Msa0178450 | Msa1148630 | 0.805678 | 1.188671e-49 | -8.615850e-47 |
| Msa0178450 | Msa1154550 | 0.814165 | 1.770124e-51 | -8.615850e-47 |
| Msa0178450 | Msa1159590 | 0.822319 | 2.524745e-53 | -8.615850e-47 |
| Msa0178450 | Msa1162880 | 0.809224 | 2.102743e-50 | -8.615850e-47 |
| Msa0178450 | Msa1165480 | 0.801450 | 8.952844e-49 | -8.615850e-47 |
| Msa0178450 | Msa1169190 | 0.831574 | 1.545085e-55 | -8.615850e-47 |
| Msa0178450 | Msa1171290 | 0.813078 | 3.071100e-51 | -8.615850e-47 |
| Msa0178450 | Msa1183910 | 0.824607 | 7.363618e-54 | -8.615850e-47 |
| Msa0178450 | Msa1190390 | 0.815484 | 9.029477e-52 | -8.615850e-47 |
| Msa0178450 | Msa1192560 | 0.863219 | 2.910759e-64 | -8.615850e-47 |
| Msa0178450 | Msa1192590 | 0.861902 | 7.401031e-64 | -8.615850e-47 |
| Msa0178450 | Msa1205110 | 0.818560 | 1.838949e-52 | -8.615850e-47 |
| Msa0178450 | Msa1213830 | 0.817004 | 4.128556e-52 | -8.615850e-47 |
| Msa0178450 | Msa1214350 | 0.811634 | 6.346188e-51 | -8.615850e-47 |
| Msa0178450 | Msa1215980 | 0.807585 | 4.704862e-50 | -8.615850e-47 |
| Msa0178450 | Msa1218820 | 0.829939 | 3.888666e-55 | -8.615850e-47 |
| Msa0178450 | Msa1219770 | 0.829816 | 4.164957e-55 | -8.615850e-47 |
| Msa0178450 | Msa1221120 | 0.833360 | 5.576981e-56 | -8.615850e-47 |
| Msa0178450 | Msa1228580 | 0.875512 | 2.906206e-68 | -8.615850e-47 |
| Msa0178450 | Msa1228630 | 0.825833 | 3.779307e-54 | -8.615850e-47 |
| Msa0178450 | Msa1244240 | 0.807235 | 5.580546e-50 | -8.615850e-47 |
| Msa0178450 | Msa1252790 | 0.833557 | 4.979699e-56 | -8.615850e-47 |
| Msa0178450 | Msa1254100 | 0.812465 | 4.183072e-51 | -8.615850e-47 |
| Msa0178450 | Msa1254540 | 0.832869 | 7.387612e-56 | -8.615850e-47 |
| Msa0178450 | Msa1263740 | 0.837671 | 4.529756e-57 | -8.615850e-47 |
| Msa0178450 | Msa1263780 | 0.844322 | 8.121340e-59 | -8.615850e-47 |
| Msa0178450 | Msa1265450 | 0.834429 | 3.013382e-56 | -8.615850e-47 |
| Msa0178450 | Msa1266690 | 0.803566 | 3.279020e-49 | -8.615850e-47 |
| Msa0178450 | Msa1279120 | 0.847139 | 1.397189e-59 | -8.615850e-47 |
| Msa0178450 | Msa1294460 | 0.814889 | 1.224106e-51 | -8.615850e-47 |
| Msa0178450 | Msa1294790 | 0.805432 | 1.338934e-49 | -8.615850e-47 |
| Msa0178450 | Msa1300460 | 0.824073 | 9.834107e-54 | -8.615850e-47 |
| Msa0178450 | Msa1301820 | 0.807469 | 4.978077e-50 | -8.615850e-47 |
| Msa0178450 | Msa1303560 | 0.811103 | 8.277671e-51 | -8.615850e-47 |
| Msa0178450 | Msa1303650 | 0.816528 | 5.279488e-52 | -8.615850e-47 |
| Msa0178450 | Msa1308820 | 0.814622 | 1.403112e-51 | -8.615850e-47 |
| Msa0178450 | Msa1308850 | 0.857406 | 1.667991e-62 | -8.615850e-47 |
| Msa0178450 | Msa1309090 | 0.806196 | 9.248784e-50 | -8.615850e-47 |
| Msa0178450 | Msa1332950 | 0.824381 | 8.325150e-54 | -8.615850e-47 |
| Msa0178450 | Msa1338210 | 0.803739 | 3.019069e-49 | -8.615850e-47 |
| Msa0178450 | Msa1339170 | 0.803016 | 4.262828e-49 | -8.615850e-47 |
| Msa0178450 | Msa1364410 | 0.815374 | 9.554935e-52 | -8.615850e-47 |
| Msa0178450 | Msa1365500 | 0.803644 | 3.159533e-49 | -8.615850e-47 |
| Msa0178450 | Msa1366150 | 0.818876 | 1.559056e-52 | -8.615850e-47 |
| Msa0178450 | Msa1368750 | 0.822931 | 1.818542e-53 | -8.615850e-47 |
| Msa0178450 | Msa1372040 | 0.877138 | 7.987998e-69 | -8.615850e-47 |
| Msa0178450 | Msa1374790 | 0.820659 | 6.101522e-53 | -8.615850e-47 |
| Msa0178450 | Msa1381470 | 0.805228 | 1.477224e-49 | -8.615850e-47 |
| Msa0178450 | Msa1383310 | 0.804157 | 2.471310e-49 | -8.615850e-47 |
| Msa0178450 | Msa1384150 | 0.837662 | 4.555140e-57 | -8.615850e-47 |
| Msa0178450 | Msa1387440 | 0.828265 | 9.895006e-55 | -8.615850e-47 |
| Msa0178450 | Msa1387500 | 0.811357 | 7.291069e-51 | -8.615850e-47 |
| Msa0178450 | Msa1389820 | 0.801957 | 7.047363e-49 | -8.615850e-47 |
| Msa0178450 | Msa1405460 | 0.846015 | 2.832578e-59 | -8.615850e-47 |
| Msa0178450 | Msa1406720 | 0.804927 | 1.707700e-49 | -8.615850e-47 |
| Msa0178450 | Msa1407840 | 0.805844 | 1.096780e-49 | -8.615850e-47 |
| Msa0178450 | Msa1409410 | 0.815793 | 7.706122e-52 | -8.615850e-47 |
| Msa0178450 | Msa1426110 | 0.800705 | 1.271269e-48 | -8.615850e-47 |
| Msa0178450 | Msa1426320 | 0.813364 | 2.657875e-51 | -8.615850e-47 |
| Msa0178450 | Msa1427100 | 0.802818 | 4.684719e-49 | -8.615850e-47 |
| Msa0178450 | Msa1428240 | 0.817446 | 3.284471e-52 | -8.615850e-47 |
| Msa0178450 | Msa1429070 | 0.809695 | 1.666443e-50 | -8.615850e-47 |
| Msa0178450 | Msa1433860 | 0.805814 | 1.113085e-49 | -8.615850e-47 |
| Msa0178450 | Msa1434640 | 0.801172 | 1.020749e-48 | -8.615850e-47 |
| Msa0178450 | Msa1435960 | 0.992219 | 5.389370e-192 | -8.615850e-47 |
| Msa0178450 | Msa1436620 | 0.851968 | 6.278546e-61 | -8.615850e-47 |
| Msa0178450 | Msa1437810 | 0.809917 | 1.493045e-50 | -8.615850e-47 |
| Msa0178450 | Msa1445120 | 0.804401 | 2.199374e-49 | -8.615850e-47 |
| Msa0178450 | Msa1450190 | 0.826684 | 2.370231e-54 | -8.615850e-47 |
| Msa0178450 | Msa1451820 | 0.821826 | 3.283496e-53 | -8.615850e-47 |
| Msa0178450 | Msa1454010 | 0.818318 | 2.086765e-52 | -8.615850e-47 |
| Msa0178450 | Msa1457840 | 0.817262 | 3.612542e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178450 | MtrunA17_Chr1g0208231 | 93.048 | 374 | 23 | 1 | 17 | 387 | 11 | 384 | 0.0 | 673 |
| Msa0178450 | MtrunA17_Chr3g0134261 | 53.533 | 368 | 130 | 12 | 14 | 366 | 3 | 344 | 8.41e-116 | 341 |
| Msa0178450 | MtrunA17_Chr4g0053381 | 49.862 | 363 | 163 | 8 | 23 | 381 | 8 | 355 | 1.71e-113 | 335 |
| Msa0178450 | MtrunA17_Chr5g0412471 | 37.023 | 262 | 157 | 2 | 110 | 371 | 92 | 345 | 1.69e-48 | 167 |
| Msa0178450 | MtrunA17_Chr4g0041721 | 33.588 | 262 | 164 | 5 | 76 | 334 | 59 | 313 | 4.09e-47 | 164 |
| Msa0178450 | MtrunA17_Chr3g0133211 | 52.672 | 131 | 61 | 1 | 96 | 225 | 82 | 212 | 2.44e-42 | 152 |
| Msa0178450 | MtrunA17_Chr5g0414271 | 38.839 | 224 | 126 | 2 | 98 | 312 | 56 | 277 | 2.62e-39 | 143 |
| Msa0178450 | MtrunA17_Chr8g0364521 | 37.168 | 226 | 131 | 2 | 96 | 312 | 71 | 294 | 2.68e-38 | 140 |
| Msa0178450 | MtrunA17_Chr5g0427191 | 31.765 | 255 | 164 | 4 | 108 | 357 | 86 | 335 | 4.78e-32 | 124 |
| Msa0178450 | MtrunA17_Chr5g0401271 | 30.537 | 298 | 173 | 9 | 23 | 304 | 13 | 292 | 7.75e-30 | 117 |
| Msa0178450 | MtrunA17_Chr8g0367661 | 32.906 | 234 | 136 | 6 | 110 | 333 | 108 | 330 | 1.04e-29 | 118 |
| Msa0178450 | MtrunA17_Chr3g0134781 | 40.523 | 153 | 87 | 2 | 74 | 226 | 34 | 182 | 6.88e-29 | 114 |
| Msa0178450 | MtrunA17_Chr2g0323361 | 30.040 | 253 | 147 | 9 | 125 | 362 | 64 | 301 | 4.07e-22 | 95.5 |
| Msa0178450 | MtrunA17_Chr2g0280941 | 32.484 | 157 | 99 | 3 | 112 | 268 | 43 | 192 | 1.94e-20 | 90.1 |
| Msa0178450 | MtrunA17_Chr4g0054011 | 29.208 | 202 | 133 | 6 | 73 | 268 | 31 | 228 | 4.35e-14 | 72.4 |
| Msa0178450 | MtrunA17_Chr1g0152871 | 29.814 | 161 | 95 | 5 | 114 | 266 | 131 | 281 | 2.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178450 | AT4G34160.1 | 56.026 | 307 | 110 | 6 | 1 | 307 | 1 | 282 | 1.19e-108 | 324 |
| Msa0178450 | AT5G67260.1 | 44.882 | 381 | 173 | 9 | 14 | 383 | 11 | 365 | 3.59e-93 | 284 |
| Msa0178450 | AT5G67260.2 | 45.576 | 373 | 166 | 9 | 14 | 375 | 11 | 357 | 5.64e-91 | 280 |
| Msa0178450 | AT3G50070.1 | 42.933 | 375 | 185 | 7 | 14 | 384 | 10 | 359 | 9.37e-90 | 275 |
| Msa0178450 | AT2G22490.1 | 35.931 | 231 | 136 | 3 | 110 | 333 | 97 | 322 | 1.67e-43 | 155 |
| Msa0178450 | AT2G22490.2 | 35.776 | 232 | 136 | 4 | 110 | 333 | 97 | 323 | 9.84e-42 | 150 |
| Msa0178450 | AT1G70210.1 | 38.424 | 203 | 125 | 0 | 110 | 312 | 82 | 284 | 1.42e-40 | 147 |
| Msa0178450 | AT5G65420.4 | 48.718 | 117 | 60 | 0 | 110 | 226 | 78 | 194 | 4.13e-35 | 130 |
| Msa0178450 | AT5G65420.2 | 49.138 | 116 | 59 | 0 | 110 | 225 | 78 | 193 | 4.26e-35 | 129 |
| Msa0178450 | AT5G65420.1 | 49.138 | 116 | 59 | 0 | 110 | 225 | 78 | 193 | 7.77e-35 | 130 |
| Msa0178450 | AT5G65420.3 | 45.238 | 126 | 59 | 1 | 110 | 225 | 78 | 203 | 9.35e-33 | 125 |
| Msa0178450 | AT5G10440.1 | 34.247 | 219 | 143 | 1 | 51 | 268 | 10 | 228 | 2.62e-30 | 118 |
| Msa0178450 | AT5G10440.2 | 37.143 | 175 | 110 | 0 | 51 | 225 | 10 | 184 | 1.18e-29 | 114 |
| Msa0178450 | AT4G03270.1 | 30.719 | 306 | 179 | 11 | 71 | 364 | 16 | 300 | 3.18e-24 | 101 |
| Msa0178450 | AT4G03270.2 | 31.250 | 304 | 179 | 12 | 71 | 364 | 16 | 299 | 1.18e-22 | 97.4 |
| Msa0178450 | AT4G37630.2 | 36.806 | 144 | 82 | 3 | 91 | 226 | 45 | 187 | 2.53e-21 | 92.8 |
| Msa0178450 | AT4G37630.3 | 36.986 | 146 | 81 | 4 | 91 | 226 | 45 | 189 | 9.11e-21 | 91.3 |
| Msa0178450 | AT4G37630.1 | 33.014 | 209 | 107 | 7 | 23 | 226 | 9 | 189 | 2.19e-20 | 91.3 |
| Msa0178450 | AT5G02110.1 | 25.357 | 280 | 184 | 9 | 106 | 378 | 74 | 335 | 5.13e-19 | 87.8 |
| Msa0178450 | AT5G02110.2 | 25.751 | 233 | 148 | 9 | 153 | 378 | 92 | 306 | 1.69e-14 | 73.9 |
Find 90 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATTCATGTAAATGAATT+TGG | 0.114219 | 1_4:+65756494 | None:intergenic |
| ATCATATTTCTATAATAAAT+TGG | 0.121107 | 1_4:-65756262 | Msa0178450:three_prime_UTR |
| CTTCTAGACCATACCAAATT+TGG | 0.122651 | 1_4:-65756295 | Msa0178450:three_prime_UTR |
| ATTTGTTTGTTTGAAATATT+TGG | 0.165317 | 1_4:-65756196 | Msa0178450:three_prime_UTR |
| CTTAAAGTCAATGCTCATTA+TGG | 0.232843 | 1_4:-65757988 | Msa0178450:CDS |
| GATATAAATATGTCCAAATT+TGG | 0.245540 | 1_4:+65756282 | None:intergenic |
| ATCTTCATTGGGAGTTTCTT+AGG | 0.261503 | 1_4:-65757576 | Msa0178450:CDS |
| TGAATTTGTCACCGATTAAC+AGG | 0.270558 | 1_4:-65756722 | Msa0178450:CDS |
| CTAACAAAAGCAGAGGTAAA+AGG | 0.274372 | 1_4:+65758157 | None:intergenic |
| TAATTTCTGATGAGTTAAAA+AGG | 0.280244 | 1_4:-65756425 | Msa0178450:three_prime_UTR |
| GATTGAAAACTAATCTTCAT+TGG | 0.293518 | 1_4:-65757588 | Msa0178450:CDS |
| ATGATATCTGTTTCATTTCA+AGG | 0.312964 | 1_4:-65756348 | Msa0178450:three_prime_UTR |
| AGATGATGATAGAGGATTAA+AGG | 0.316170 | 1_4:-65756454 | Msa0178450:three_prime_UTR |
| AACAACAAACTATGATATAT+TGG | 0.316538 | 1_4:-65758190 | Msa0178450:CDS |
| TAGAAAGAGTAGAGAGTATA+GGG | 0.317667 | 1_4:+65758545 | None:intergenic |
| CTTACAAATGCAAATAATTA+TGG | 0.328803 | 1_4:-65756906 | Msa0178450:CDS |
| CTACTATGATAAAATAATAT+TGG | 0.355346 | 1_4:+65756101 | None:intergenic |
| TTGCTGTTAACTATCTTGAT+AGG | 0.355913 | 1_4:-65757942 | Msa0178450:CDS |
| CTAGAAAGAGTAGAGAGTAT+AGG | 0.358472 | 1_4:+65758544 | None:intergenic |
| TGAAATGAAACAGATATCAT+AGG | 0.368633 | 1_4:+65756351 | None:intergenic |
| TTTATAGATTCAAGATTTGT+TGG | 0.378968 | 1_4:-65757328 | Msa0178450:intron |
| TTCTTGTTGAGTTATCTCTT+TGG | 0.382076 | 1_4:+65758089 | None:intergenic |
| AAGTGTGTTGTTGAAGTTGT+TGG | 0.394682 | 1_4:+65758310 | None:intergenic |
| TCATATTTCTATAATAAATT+GGG | 0.397018 | 1_4:-65756261 | Msa0178450:three_prime_UTR |
| AGATTCATGTAAATGAATTT+GGG | 0.403114 | 1_4:+65756495 | None:intergenic |
| TGATTCTGTCAACACTGAAA+TGG | 0.413211 | 1_4:-65757666 | Msa0178450:CDS |
| CACGTCGTGAAGCCGTTGAA+TGG | 0.426745 | 1_4:-65758014 | Msa0178450:CDS |
| TTCTTGGTCTTCTTAAACAC+AGG | 0.430266 | 1_4:+65756759 | None:intergenic |
| ATTGAAAACTAATCTTCATT+GGG | 0.430502 | 1_4:-65757587 | Msa0178450:CDS |
| TTTATTTAATCTAGTAAGAC+AGG | 0.433476 | 1_4:-65756077 | Msa0178450:three_prime_UTR |
| AAAGGACAGAAAACGGATAG+AGG | 0.440283 | 1_4:+65756657 | None:intergenic |
| TTCTAGATCACATTATAAGA+AGG | 0.447293 | 1_4:-65757615 | Msa0178450:CDS |
| AAATGAATTTGGGACATTGT+TGG | 0.449762 | 1_4:+65756505 | None:intergenic |
| CCGACAATGACCCTGTTAAT+CGG | 0.454527 | 1_4:+65756711 | None:intergenic |
| TATCATCACTCTGTTCAATC+TGG | 0.455099 | 1_4:+65757257 | None:intergenic |
| GATCACATTATAAGAAGGCT+TGG | 0.460558 | 1_4:-65757610 | Msa0178450:CDS |
| TTTGAGTGGACCATTTGGTT+GGG | 0.464110 | 1_4:+65756133 | None:intergenic |
| GTTTGAAATATTTGGATGGA+TGG | 0.468379 | 1_4:-65756188 | Msa0178450:three_prime_UTR |
| CAAAAGCTCCATTCTCTGAA+TGG | 0.472197 | 1_4:+65757687 | None:intergenic |
| ATTACGCCACTTGGACTACC+AGG | 0.474746 | 1_4:+65756855 | None:intergenic |
| GAAGGAGAAGTTGTAGATGA+AGG | 0.479700 | 1_4:-65758231 | Msa0178450:CDS |
| TAACAAAAGCAGAGGTAAAA+GGG | 0.491260 | 1_4:+65758158 | None:intergenic |
| AGATACTAAATATGTGTTTG+AGG | 0.495892 | 1_4:-65757716 | Msa0178450:CDS |
| AGACAGGAAGAAATAAAGAA+AGG | 0.496540 | 1_4:-65756061 | Msa0178450:three_prime_UTR |
| GGCAAAGACCATTCAGAGAA+TGG | 0.496737 | 1_4:-65757695 | Msa0178450:CDS |
| GACTTTAAGCATCCATTCAA+CGG | 0.507804 | 1_4:+65758002 | None:intergenic |
| AGAGTAGAGAGTATAGGGAG+AGG | 0.513215 | 1_4:+65758550 | None:intergenic |
| AGAAAAGAGTGTGTTGTCAC+TGG | 0.519215 | 1_4:+65757634 | None:intergenic |
| ATGATAGAGGATTAAAGGAA+TGG | 0.522983 | 1_4:-65756449 | Msa0178450:three_prime_UTR |
| ACAGCATCAATTACGCCACT+TGG | 0.527358 | 1_4:+65756846 | None:intergenic |
| TGAAATATTTGGATGGATGG+TGG | 0.528447 | 1_4:-65756185 | Msa0178450:three_prime_UTR |
| CCGATTAACAGGGTCATTGT+CGG | 0.532014 | 1_4:-65756711 | Msa0178450:CDS |
| TTTAAGAAGACCAAGAATCA+AGG | 0.533821 | 1_4:-65756753 | Msa0178450:CDS |
| ATTGAACAGAGTGATGATAA+TGG | 0.537100 | 1_4:-65757253 | Msa0178450:CDS |
| AAATATGTCCAAATTTGGTA+TGG | 0.537560 | 1_4:+65756287 | None:intergenic |
| CTGATGGTTCTAACGATTCG+TGG | 0.539073 | 1_4:-65756815 | Msa0178450:CDS |
| TGGTTGTGTTCCTTCTGTGT+TGG | 0.540643 | 1_4:-65757308 | Msa0178450:CDS |
| CAGTGGCAAGATGATGATAG+AGG | 0.542425 | 1_4:-65756462 | Msa0178450:three_prime_UTR |
| CTCTTCTTCACTGAAGAAGA+TGG | 0.544080 | 1_4:-65758358 | Msa0178450:exon |
| GAAATGAAACAGATATCATA+GGG | 0.549435 | 1_4:+65756352 | None:intergenic |
| AGATGTGCGACCCAACCAAA+TGG | 0.552472 | 1_4:-65756143 | Msa0178450:three_prime_UTR |
| TTTACATGAATCTCTTGAAG+AGG | 0.556584 | 1_4:-65756485 | Msa0178450:three_prime_UTR |
| CATTCAACGGCTTCACGACG+TGG | 0.556963 | 1_4:+65758015 | None:intergenic |
| AAATGGGAAGATGATGATGA+AGG | 0.560202 | 1_4:-65758249 | Msa0178450:CDS |
| AAGGACAGAAAACGGATAGA+GGG | 0.568780 | 1_4:+65756658 | None:intergenic |
| TGAATCTCTTGAAGAGGCAG+TGG | 0.568786 | 1_4:-65756479 | Msa0178450:three_prime_UTR |
| CATCTTCTTCAGTGAAGAAG+AGG | 0.570851 | 1_4:+65758359 | None:intergenic |
| AATATTTGGATGGATGGTGG+TGG | 0.572220 | 1_4:-65756182 | Msa0178450:three_prime_UTR |
| GTTTGTTTGAAATATTTGGA+TGG | 0.587629 | 1_4:-65756192 | Msa0178450:three_prime_UTR |
| ACAGAGAAGACAGAACAAAG+AGG | 0.595388 | 1_4:-65758456 | Msa0178450:five_prime_UTR |
| ATATTTGGATGGATGGTGGT+GGG | 0.598602 | 1_4:-65756181 | Msa0178450:three_prime_UTR |
| CGAAAGTATGAAGAAATCCC+TGG | 0.598980 | 1_4:-65756873 | Msa0178450:CDS |
| TTCTGTTCTAACAAAAGCAG+AGG | 0.599651 | 1_4:+65758150 | None:intergenic |
| AACATGCAACATTGTAGCAG+TGG | 0.604318 | 1_4:+65757285 | None:intergenic |
| CTTCTTAAACACAGGCTCTG+AGG | 0.608564 | 1_4:+65756767 | None:intergenic |
| ACTTGAAGGTCTAAGAGAAG+AGG | 0.611584 | 1_4:+65757817 | None:intergenic |
| GGTGATTGTGATGATGATGA+TGG | 0.615500 | 1_4:+65758331 | None:intergenic |
| GTAGCAGTGGCCAACACAGA+AGG | 0.618074 | 1_4:+65757298 | None:intergenic |
| TCAGTGAAGAAGAGGGTGTG+TGG | 0.620217 | 1_4:+65758367 | None:intergenic |
| AAGAGGAAAAGAGAGAGCGA+TGG | 0.620696 | 1_4:-65758439 | Msa0178450:five_prime_UTR |
| TTCTAACGATTCGTGGACAG+TGG | 0.621696 | 1_4:-65756808 | Msa0178450:CDS |
| TCTAACGATTCGTGGACAGT+GGG | 0.629045 | 1_4:-65756807 | Msa0178450:CDS |
| GCAACAAGCTGAATCATCCA+TGG | 0.629983 | 1_4:+65757886 | None:intergenic |
| TAATGTTCTCAAAATCAGCA+AGG | 0.638487 | 1_4:-65757206 | Msa0178450:intron |
| GAATTTGTCACCGATTAACA+GGG | 0.642593 | 1_4:-65756721 | Msa0178450:CDS |
| TTACGCCACTTGGACTACCA+GGG | 0.660070 | 1_4:+65756856 | None:intergenic |
| ATCTTCTTCAGTGAAGAAGA+GGG | 0.660634 | 1_4:+65758360 | None:intergenic |
| GAAATCCCTGGTAGTCCAAG+TGG | 0.669163 | 1_4:-65756861 | Msa0178450:CDS |
| ACAGAGTGATGATAATGGTG+TGG | 0.694988 | 1_4:-65757248 | Msa0178450:CDS |
| TCAACAAGAAACATATTACG+AGG | 0.716642 | 1_4:-65758076 | Msa0178450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTTAAAATAAAA+AGG | + | chr1_4:65758096-65758115 | None:intergenic | 0.0% |
| !!! | AAATTAAACATAAAGTATTA+AGG | + | chr1_4:65757582-65757601 | None:intergenic | 10.0% |
| !!! | AATAAAATATAGATCTTTTT+GGG | + | chr1_4:65758136-65758155 | None:intergenic | 10.0% |
| !!! | AAATAAAATATAGATCTTTT+TGG | + | chr1_4:65758137-65758156 | None:intergenic | 10.0% |
| !!! | ATCATATTTCTATAATAAAT+TGG | - | chr1_4:65758470-65758489 | Msa0178450:five_prime_UTR | 10.0% |
| !!! | TCATATTTCTATAATAAATT+GGG | - | chr1_4:65758471-65758490 | Msa0178450:five_prime_UTR | 10.0% |
| !!! | ATAAAATATAGATCTTTTTG+GGG | + | chr1_4:65758135-65758154 | None:intergenic | 15.0% |
| !!! | GATCTATATTTTATTTACTA+TGG | - | chr1_4:65758141-65758160 | Msa0178450:CDS | 15.0% |
| !!! | AATAAATTGGGAATAATTTT+TGG | - | chr1_4:65758483-65758502 | Msa0178450:five_prime_UTR | 15.0% |
| !!! | ATTTGTTTGTTTGAAATATT+TGG | - | chr1_4:65758536-65758555 | Msa0178450:five_prime_UTR | 15.0% |
| !! | CTACTATGATAAAATAATAT+TGG | + | chr1_4:65758634-65758653 | None:intergenic | 15.0% |
| !! | CTTTGTTCATTATAAAAAGA+AGG | + | chr1_4:65756343-65756362 | None:intergenic | 20.0% |
| !!! | CTTCTTTTTATAATGAACAA+AGG | - | chr1_4:65756341-65756360 | Msa0178450:three_prime_UTR | 20.0% |
| !! | AACAACAAACTATGATATAT+TGG | - | chr1_4:65756542-65756561 | Msa0178450:three_prime_UTR | 20.0% |
| !! | CAAAAACAAACATAAGAAAA+AGG | + | chr1_4:65756985-65757004 | None:intergenic | 20.0% |
| !!! | CTTATGTTTGTTTTTGTTAA+AGG | - | chr1_4:65756989-65757008 | Msa0178450:intron | 20.0% |
| !! | ATTGAAAACTAATCTTCATT+GGG | - | chr1_4:65757145-65757164 | Msa0178450:intron | 20.0% |
| !! | TTTATAGATTCAAGATTTGT+TGG | - | chr1_4:65757404-65757423 | Msa0178450:intron | 20.0% |
| !! | CTTACAAATGCAAATAATTA+TGG | - | chr1_4:65757826-65757845 | Msa0178450:CDS | 20.0% |
| !! | AAAATAAAAAGGACAGAAAA+CGG | + | chr1_4:65758085-65758104 | None:intergenic | 20.0% |
| !!! | TAAAATATAGATCTTTTTGG+GGG | + | chr1_4:65758134-65758153 | None:intergenic | 20.0% |
| !! | AGATTCATGTAAATGAATTT+GGG | + | chr1_4:65758240-65758259 | None:intergenic | 20.0% |
| !! | TAATTTCTGATGAGTTAAAA+AGG | - | chr1_4:65758307-65758326 | Msa0178450:CDS | 20.0% |
| !! | GATATAAATATGTCCAAATT+TGG | + | chr1_4:65758453-65758472 | None:intergenic | 20.0% |
| !! | TTTATTTAATCTAGTAAGAC+AGG | - | chr1_4:65758655-65758674 | Msa0178450:five_prime_UTR | 20.0% |
| ! | AGATACTAAATATGTGTTTG+AGG | - | chr1_4:65757016-65757035 | Msa0178450:intron | 25.0% |
| ! | TTCTAGATCACATTATAAGA+AGG | - | chr1_4:65757117-65757136 | Msa0178450:intron | 25.0% |
| ! | GATTGAAAACTAATCTTCAT+TGG | - | chr1_4:65757144-65757163 | Msa0178450:intron | 25.0% |
| !!! | TGAAAGAGTACTAAAAATGT+TGG | + | chr1_4:65757223-65757242 | None:intergenic | 25.0% |
| ! | AATTTAATAGAACTACTCGA+TGG | - | chr1_4:65757624-65757643 | Msa0178450:CDS | 25.0% |
| ! | ATTTAATAGAACTACTCGAT+GGG | - | chr1_4:65757625-65757644 | Msa0178450:CDS | 25.0% |
| ! | TAAACAAAAAACACATGCAA+AGG | + | chr1_4:65757767-65757786 | None:intergenic | 25.0% |
| !!! | TTTGGGGGTAATTTTTTATA+TGG | + | chr1_4:65758119-65758138 | None:intergenic | 25.0% |
| ! | GAGATTCATGTAAATGAATT+TGG | + | chr1_4:65758241-65758260 | None:intergenic | 25.0% |
| ! | GAAATGAAACAGATATCATA+GGG | + | chr1_4:65758383-65758402 | None:intergenic | 25.0% |
| ! | TGAAATGAAACAGATATCAT+AGG | + | chr1_4:65758384-65758403 | None:intergenic | 25.0% |
| ! | ATGATATCTGTTTCATTTCA+AGG | - | chr1_4:65758384-65758403 | Msa0178450:five_prime_UTR | 25.0% |
| ! | AAATATGTCCAAATTTGGTA+TGG | + | chr1_4:65758448-65758467 | None:intergenic | 25.0% |
| !!! | GGAATAATTTTTGGTCATAT+GGG | - | chr1_4:65758492-65758511 | Msa0178450:five_prime_UTR | 25.0% |
| !! | GTTTGTTTGAAATATTTGGA+TGG | - | chr1_4:65758540-65758559 | Msa0178450:five_prime_UTR | 25.0% |
| ! | TAGAAAGAGTAGAGAGTATA+GGG | + | chr1_4:65756190-65756209 | None:intergenic | 30.0% |
| ACTGTGATGAAGAAGAAAAA+TGG | - | chr1_4:65756466-65756485 | Msa0178450:three_prime_UTR | 30.0% | |
| CTGTGATGAAGAAGAAAAAT+GGG | - | chr1_4:65756467-65756486 | Msa0178450:three_prime_UTR | 30.0% | |
| TAACAAAAGCAGAGGTAAAA+GGG | + | chr1_4:65756577-65756596 | None:intergenic | 30.0% | |
| TTCTTGTTGAGTTATCTCTT+TGG | + | chr1_4:65756646-65756665 | None:intergenic | 30.0% | |
| TCAACAAGAAACATATTACG+AGG | - | chr1_4:65756656-65756675 | Msa0178450:three_prime_UTR | 30.0% | |
| CTTAAAGTCAATGCTCATTA+TGG | - | chr1_4:65756744-65756763 | Msa0178450:CDS | 30.0% | |
| ! | TTGCTGTTAACTATCTTGAT+AGG | - | chr1_4:65756790-65756809 | Msa0178450:CDS | 30.0% |
| !! | ATGGTTTCTCTTTTTGGAAA+TGG | + | chr1_4:65756830-65756849 | None:intergenic | 30.0% |
| ATTTCCAAAAAGAGAAACCA+TGG | - | chr1_4:65756829-65756848 | Msa0178450:CDS | 30.0% | |
| TTAGAAGATAACGTACTTGA+AGG | + | chr1_4:65756932-65756951 | None:intergenic | 30.0% | |
| ! | CTTCTTCTATCTGTACTTTT+AGG | - | chr1_4:65757191-65757210 | Msa0178450:intron | 30.0% |
| ATTGAACAGAGTGATGATAA+TGG | - | chr1_4:65757479-65757498 | Msa0178450:intron | 30.0% | |
| TAATGTTCTCAAAATCAGCA+AGG | - | chr1_4:65757526-65757545 | Msa0178450:intron | 30.0% | |
| !!! | TGCATGTGTTTTTTGTTTAC+AGG | - | chr1_4:65757768-65757787 | Msa0178450:intron | 30.0% |
| TTTAAGAAGACCAAGAATCA+AGG | - | chr1_4:65757979-65757998 | Msa0178450:CDS | 30.0% | |
| ! | CATATTTTGTCCTTGATTCT+TGG | + | chr1_4:65757992-65758011 | None:intergenic | 30.0% |
| ! | AAATGAATTTGGGACATTGT+TGG | + | chr1_4:65758230-65758249 | None:intergenic | 30.0% |
| TTTACATGAATCTCTTGAAG+AGG | - | chr1_4:65758247-65758266 | Msa0178450:CDS | 30.0% | |
| AGATGATGATAGAGGATTAA+AGG | - | chr1_4:65758278-65758297 | Msa0178450:CDS | 30.0% | |
| ATGATAGAGGATTAAAGGAA+TGG | - | chr1_4:65758283-65758302 | Msa0178450:CDS | 30.0% | |
| TCTGATGAGTTAAAAAGGAA+AGG | - | chr1_4:65758312-65758331 | Msa0178450:CDS | 30.0% | |
| TAAAAAGGAAAGGACAAAGT+TGG | - | chr1_4:65758322-65758341 | Msa0178450:CDS | 30.0% | |
| !!! | GGGAATAATTTTTGGTCATA+TGG | - | chr1_4:65758491-65758510 | Msa0178450:five_prime_UTR | 30.0% |
| ! | GTTTGAAATATTTGGATGGA+TGG | - | chr1_4:65758544-65758563 | Msa0178450:five_prime_UTR | 30.0% |
| ! | ATTGGTAAAGAGATTTTGAG+TGG | + | chr1_4:65758616-65758635 | None:intergenic | 30.0% |
| AGACAGGAAGAAATAAAGAA+AGG | - | chr1_4:65758671-65758690 | Msa0178450:five_prime_UTR | 30.0% | |
| ! | GTGATGATTTTCATCTGAGT+GGG | + | chr1_4:65756141-65756160 | None:intergenic | 35.0% |
| ! | AGTGATGATTTTCATCTGAG+TGG | + | chr1_4:65756142-65756161 | None:intergenic | 35.0% |
| ! | CTAGAAAGAGTAGAGAGTAT+AGG | + | chr1_4:65756191-65756210 | None:intergenic | 35.0% |
| ATCTTCTTCAGTGAAGAAGA+GGG | + | chr1_4:65756375-65756394 | None:intergenic | 35.0% | |
| ! | AAGTGTGTTGTTGAAGTTGT+TGG | + | chr1_4:65756425-65756444 | None:intergenic | 35.0% |
| ! | AAATGGGAAGATGATGATGA+AGG | - | chr1_4:65756483-65756502 | Msa0178450:three_prime_UTR | 35.0% |
| CTAACAAAAGCAGAGGTAAA+AGG | + | chr1_4:65756578-65756597 | None:intergenic | 35.0% | |
| TTCTGTTCTAACAAAAGCAG+AGG | + | chr1_4:65756585-65756604 | None:intergenic | 35.0% | |
| GACTTTAAGCATCCATTCAA+CGG | + | chr1_4:65756733-65756752 | None:intergenic | 35.0% | |
| ! | TCATCCATGGTTTCTCTTTT+TGG | + | chr1_4:65756836-65756855 | None:intergenic | 35.0% |
| TGATTCTGTCAACACTGAAA+TGG | - | chr1_4:65757066-65757085 | Msa0178450:intron | 35.0% | |
| GATCACATTATAAGAAGGCT+TGG | - | chr1_4:65757122-65757141 | Msa0178450:intron | 35.0% | |
| ATCTTCATTGGGAGTTTCTT+AGG | - | chr1_4:65757156-65757175 | Msa0178450:intron | 35.0% | |
| TATCATCACTCTGTTCAATC+TGG | + | chr1_4:65757478-65757497 | None:intergenic | 35.0% | |
| GCTCATACACAATACACATA+TGG | + | chr1_4:65757652-65757671 | None:intergenic | 35.0% | |
| !!! | GATGCTGTTTTTAGTTCTGA+TGG | - | chr1_4:65757901-65757920 | Msa0178450:CDS | 35.0% |
| ! | TTCTTGGTCTTCTTAAACAC+AGG | + | chr1_4:65757976-65757995 | None:intergenic | 35.0% |
| ! | TGAATTTGTCACCGATTAAC+AGG | - | chr1_4:65758010-65758029 | Msa0178450:CDS | 35.0% |
| ! | GAATTTGTCACCGATTAACA+GGG | - | chr1_4:65758011-65758030 | Msa0178450:CDS | 35.0% |
| ! | AAAACGGATAGAGGGTTTTA+AGG | + | chr1_4:65758069-65758088 | None:intergenic | 35.0% |
| CTTCTAGACCATACCAAATT+TGG | - | chr1_4:65758437-65758456 | Msa0178450:five_prime_UTR | 35.0% | |
| TGAAATATTTGGATGGATGG+TGG | - | chr1_4:65758547-65758566 | Msa0178450:five_prime_UTR | 35.0% | |
| ACAGAGAAGACAGAACAAAG+AGG | - | chr1_4:65756276-65756295 | Msa0178450:three_prime_UTR | 40.0% | |
| CATCTTCTTCAGTGAAGAAG+AGG | + | chr1_4:65756376-65756395 | None:intergenic | 40.0% | |
| CTCTTCTTCACTGAAGAAGA+TGG | - | chr1_4:65756374-65756393 | Msa0178450:three_prime_UTR | 40.0% | |
| ! | GGTGATTGTGATGATGATGA+TGG | + | chr1_4:65756404-65756423 | None:intergenic | 40.0% |
| GAAGGAGAAGTTGTAGATGA+AGG | - | chr1_4:65756501-65756520 | Msa0178450:three_prime_UTR | 40.0% | |
| ACTTGAAGGTCTAAGAGAAG+AGG | + | chr1_4:65756918-65756937 | None:intergenic | 40.0% | |
| CAAAAGCTCCATTCTCTGAA+TGG | + | chr1_4:65757048-65757067 | None:intergenic | 40.0% | |
| ! | AGAAAAGAGTGTGTTGTCAC+TGG | + | chr1_4:65757101-65757120 | None:intergenic | 40.0% |
| AACATGCAACATTGTAGCAG+TGG | + | chr1_4:65757450-65757469 | None:intergenic | 40.0% | |
| !! | ACAGAGTGATGATAATGGTG+TGG | - | chr1_4:65757484-65757503 | Msa0178450:intron | 40.0% |
| ! | CGAAAGTATGAAGAAATCCC+TGG | - | chr1_4:65757859-65757878 | Msa0178450:CDS | 40.0% |
| AAGGACAGAAAACGGATAGA+GGG | + | chr1_4:65758077-65758096 | None:intergenic | 40.0% | |
| AAAGGACAGAAAACGGATAG+AGG | + | chr1_4:65758078-65758097 | None:intergenic | 40.0% | |
| ! | AATATTTGGATGGATGGTGG+TGG | - | chr1_4:65758550-65758569 | Msa0178450:five_prime_UTR | 40.0% |
| ! | ATATTTGGATGGATGGTGGT+GGG | - | chr1_4:65758551-65758570 | Msa0178450:five_prime_UTR | 40.0% |
| TTTGAGTGGACCATTTGGTT+GGG | + | chr1_4:65758602-65758621 | None:intergenic | 40.0% | |
| !! | TTTTGAGTGGACCATTTGGT+TGG | + | chr1_4:65758603-65758622 | None:intergenic | 40.0% |
| !! | GAGATTTTGAGTGGACCATT+TGG | + | chr1_4:65758607-65758626 | None:intergenic | 40.0% |
| ! | AGAGTAGAGAGTATAGGGAG+AGG | + | chr1_4:65756185-65756204 | None:intergenic | 45.0% |
| AAGAGGAAAAGAGAGAGCGA+TGG | - | chr1_4:65756293-65756312 | Msa0178450:three_prime_UTR | 45.0% | |
| GCAACAAGCTGAATCATCCA+TGG | + | chr1_4:65756849-65756868 | None:intergenic | 45.0% | |
| GGCAAAGACCATTCAGAGAA+TGG | - | chr1_4:65757037-65757056 | Msa0178450:intron | 45.0% | |
| TGGTTGTGTTCCTTCTGTGT+TGG | - | chr1_4:65757424-65757443 | Msa0178450:intron | 45.0% | |
| ACAGCATCAATTACGCCACT+TGG | + | chr1_4:65757889-65757908 | None:intergenic | 45.0% | |
| !! | CTGATGGTTCTAACGATTCG+TGG | - | chr1_4:65757917-65757936 | Msa0178450:CDS | 45.0% |
| TTCTAACGATTCGTGGACAG+TGG | - | chr1_4:65757924-65757943 | Msa0178450:CDS | 45.0% | |
| TCTAACGATTCGTGGACAGT+GGG | - | chr1_4:65757925-65757944 | Msa0178450:CDS | 45.0% | |
| CTTCTTAAACACAGGCTCTG+AGG | + | chr1_4:65757968-65757987 | None:intergenic | 45.0% | |
| CCGACAATGACCCTGTTAAT+CGG | + | chr1_4:65758024-65758043 | None:intergenic | 45.0% | |
| CCGATTAACAGGGTCATTGT+CGG | - | chr1_4:65758021-65758040 | Msa0178450:CDS | 45.0% | |
| !!! | GTTTTAAGGAGAGGTTGCAG+TGG | + | chr1_4:65758055-65758074 | None:intergenic | 45.0% |
| !!! | GGATAGAGGGTTTTAAGGAG+AGG | + | chr1_4:65758064-65758083 | None:intergenic | 45.0% |
| TGAATCTCTTGAAGAGGCAG+TGG | - | chr1_4:65758253-65758272 | Msa0178450:CDS | 45.0% | |
| CAGTGGCAAGATGATGATAG+AGG | - | chr1_4:65758270-65758289 | Msa0178450:CDS | 45.0% | |
| ! | TCAGTGAAGAAGAGGGTGTG+TGG | + | chr1_4:65756368-65756387 | None:intergenic | 50.0% |
| GCAAGGTCAGTAGTAGTAGC+TGG | - | chr1_4:65757543-65757562 | Msa0178450:CDS | 50.0% | |
| GAAATCCCTGGTAGTCCAAG+TGG | - | chr1_4:65757871-65757890 | Msa0178450:CDS | 50.0% | |
| TTACGCCACTTGGACTACCA+GGG | + | chr1_4:65757879-65757898 | None:intergenic | 50.0% | |
| ATTACGCCACTTGGACTACC+AGG | + | chr1_4:65757880-65757899 | None:intergenic | 50.0% | |
| AGATGTGCGACCCAACCAAA+TGG | - | chr1_4:65758589-65758608 | Msa0178450:five_prime_UTR | 50.0% | |
| CATTCAACGGCTTCACGACG+TGG | + | chr1_4:65756720-65756739 | None:intergenic | 55.0% | |
| CACGTCGTGAAGCCGTTGAA+TGG | - | chr1_4:65756718-65756737 | Msa0178450:CDS | 55.0% | |
| GTAGCAGTGGCCAACACAGA+AGG | + | chr1_4:65757437-65757456 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 65756057 | 65758697 | 65756057 | ID=Msa0178450;Name=Msa0178450 |
| chr1_4 | mRNA | 65756057 | 65758697 | 65756057 | ID=Msa0178450-mRNA-1;Parent=Msa0178450;Name=Msa0178450-mRNA-1;_AED=0.04;_eAED=0.04;_QI=336|1|1|1|1|1|4|626|387 |
| chr1_4 | exon | 65756057 | 65756964 | 65756057 | ID=Msa0178450-mRNA-1:exon:21440;Parent=Msa0178450-mRNA-1 |
| chr1_4 | exon | 65757207 | 65757343 | 65757207 | ID=Msa0178450-mRNA-1:exon:21439;Parent=Msa0178450-mRNA-1 |
| chr1_4 | exon | 65757542 | 65757743 | 65757542 | ID=Msa0178450-mRNA-1:exon:21438;Parent=Msa0178450-mRNA-1 |
| chr1_4 | exon | 65757819 | 65758697 | 65757819 | ID=Msa0178450-mRNA-1:exon:21437;Parent=Msa0178450-mRNA-1 |
| chr1_4 | five_prime_UTR | 65758362 | 65758697 | 65758362 | ID=Msa0178450-mRNA-1:five_prime_utr;Parent=Msa0178450-mRNA-1 |
| chr1_4 | CDS | 65757819 | 65758361 | 65757819 | ID=Msa0178450-mRNA-1:cds;Parent=Msa0178450-mRNA-1 |
| chr1_4 | CDS | 65757542 | 65757743 | 65757542 | ID=Msa0178450-mRNA-1:cds;Parent=Msa0178450-mRNA-1 |
| chr1_4 | CDS | 65757207 | 65757343 | 65757207 | ID=Msa0178450-mRNA-1:cds;Parent=Msa0178450-mRNA-1 |
| chr1_4 | CDS | 65756683 | 65756964 | 65756683 | ID=Msa0178450-mRNA-1:cds;Parent=Msa0178450-mRNA-1 |
| chr1_4 | three_prime_UTR | 65756057 | 65756682 | 65756057 | ID=Msa0178450-mRNA-1:three_prime_utr;Parent=Msa0178450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
