Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453740 | sp|O49711|PP335_ARATH | 40.316 | 759 | 367 | 6 | 129 | 855 | 118 | 822 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453740 | G7JF19 | 86.268 | 903 | 36 | 4 | 15 | 883 | 1 | 849 | 0.0 | 1523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032430 | Msa1453740 | 0.802460 | 5.551053e-49 | -8.615850e-47 |
| Msa0034270 | Msa1453740 | 0.801148 | 1.032332e-48 | -8.615850e-47 |
| Msa0036850 | Msa1453740 | 0.840560 | 8.081122e-58 | -8.615850e-47 |
| Msa0061290 | Msa1453740 | 0.808009 | 3.821994e-50 | -8.615850e-47 |
| Msa0089630 | Msa1453740 | 0.804694 | 1.909775e-49 | -8.615850e-47 |
| Msa0094140 | Msa1453740 | 0.809222 | 2.105617e-50 | -8.615850e-47 |
| Msa1370010 | Msa1453740 | 0.943255 | 1.671946e-102 | -8.615850e-47 |
| Msa1432950 | Msa1453740 | 0.839006 | 2.050913e-57 | -8.615850e-47 |
| Msa1453740 | Msa1459380 | 0.841723 | 3.997388e-58 | -8.615850e-47 |
| Msa0616220 | Msa1453740 | 0.806845 | 6.750729e-50 | -8.615850e-47 |
| Msa0649940 | Msa1453740 | 0.917523 | 4.786316e-86 | -8.615850e-47 |
| Msa0650020 | Msa1453740 | 0.890285 | 1.131572e-73 | -8.615850e-47 |
| Msa0663300 | Msa1453740 | 0.809249 | 2.077761e-50 | -8.615850e-47 |
| Msa0664060 | Msa1453740 | 0.812108 | 5.004842e-51 | -8.615850e-47 |
| Msa0683570 | Msa1453740 | 0.805666 | 1.195577e-49 | -8.615850e-47 |
| Msa0691980 | Msa1453740 | 0.952225 | 3.828795e-110 | -8.615850e-47 |
| Msa0754520 | Msa1453740 | 0.802063 | 6.702712e-49 | -8.615850e-47 |
| Msa0136650 | Msa1453740 | 0.812709 | 3.699209e-51 | -8.615850e-47 |
| Msa0225740 | Msa1453740 | 0.803257 | 3.799874e-49 | -8.615850e-47 |
| Msa0225760 | Msa1453740 | 0.811618 | 6.396545e-51 | -8.615850e-47 |
| Msa1232710 | Msa1453740 | 0.805372 | 1.378352e-49 | -8.615850e-47 |
| Msa1252190 | Msa1453740 | 0.805986 | 1.024247e-49 | -8.615850e-47 |
| Msa1313300 | Msa1453740 | 0.804410 | 2.189141e-49 | -8.615850e-47 |
| Msa0380620 | Msa1453740 | 0.806461 | 8.134236e-50 | -8.615850e-47 |
| Msa0417880 | Msa1453740 | 0.807093 | 5.982141e-50 | -8.615850e-47 |
| Msa0430260 | Msa1453740 | 0.815370 | 9.571880e-52 | -8.615850e-47 |
| Msa0467300 | Msa1453740 | 0.815883 | 7.358136e-52 | -8.615850e-47 |
| Msa1048920 | Msa1453740 | 0.802427 | 5.639847e-49 | -8.615850e-47 |
| Msa0260610 | Msa1453740 | 0.823483 | 1.351596e-53 | -8.615850e-47 |
| Msa0260670 | Msa1453740 | 0.819354 | 1.213599e-52 | -8.615850e-47 |
| Msa0261340 | Msa1453740 | 0.804111 | 2.526701e-49 | -8.615850e-47 |
| Msa0264870 | Msa1453740 | 0.820974 | 5.164855e-53 | -8.615850e-47 |
| Msa0292400 | Msa1453740 | 0.830630 | 2.635094e-55 | -8.615850e-47 |
| Msa1170990 | Msa1453740 | 0.804480 | 2.117302e-49 | -8.615850e-47 |
| Msa1182860 | Msa1453740 | 0.805233 | 1.473693e-49 | -8.615850e-47 |
| Msa0532070 | Msa1453740 | 0.809948 | 1.470092e-50 | -8.615850e-47 |
| Msa0569200 | Msa1453740 | 0.808444 | 3.087722e-50 | -8.615850e-47 |
| Msa0579930 | Msa1453740 | 0.823528 | 1.319425e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453740 | MtrunA17_Chr4g0041921 | 86.268 | 903 | 36 | 4 | 15 | 883 | 1 | 849 | 0.0 | 1523 |
| Msa1453740 | MtrunA17_Chr4g0041891 | 57.493 | 367 | 125 | 9 | 15 | 380 | 1 | 337 | 2.46e-116 | 358 |
| Msa1453740 | MtrunA17_Chr7g0215611 | 52.722 | 349 | 146 | 5 | 125 | 471 | 49 | 380 | 1.35e-104 | 330 |
| Msa1453740 | MtrunA17_Chr2g0319471 | 44.819 | 415 | 205 | 4 | 25 | 438 | 9 | 400 | 2.40e-99 | 320 |
| Msa1453740 | MtrunA17_Chr2g0319471 | 45.794 | 107 | 58 | 0 | 681 | 787 | 407 | 513 | 9.73e-16 | 81.3 |
| Msa1453740 | MtrunA17_Chr4g0075891 | 38.730 | 488 | 182 | 10 | 398 | 838 | 97 | 514 | 1.47e-88 | 292 |
| Msa1453740 | MtrunA17_Chr7g0223551 | 51.648 | 273 | 116 | 6 | 588 | 846 | 1 | 271 | 8.94e-77 | 253 |
| Msa1453740 | MtrunA17_Chr7g0223561 | 54.065 | 246 | 85 | 6 | 230 | 471 | 13 | 234 | 3.77e-68 | 230 |
| Msa1453740 | MtrunA17_Chr7g0223591 | 50.174 | 287 | 107 | 8 | 190 | 471 | 83 | 338 | 6.94e-67 | 229 |
| Msa1453740 | MtrunA17_Chr7g0215621 | 44.330 | 291 | 115 | 5 | 584 | 839 | 4 | 282 | 1.92e-55 | 193 |
| Msa1453740 | MtrunA17_Chr5g0413891 | 36.264 | 273 | 129 | 8 | 638 | 870 | 15 | 282 | 5.61e-34 | 132 |
| Msa1453740 | MtrunA17_Chr8g0368851 | 40.120 | 167 | 63 | 2 | 454 | 620 | 50 | 179 | 5.81e-28 | 115 |
| Msa1453740 | MtrunA17_Chr7g0223581 | 59.302 | 86 | 35 | 0 | 588 | 673 | 1 | 86 | 2.65e-26 | 103 |
| Msa1453740 | MtrunA17_Chr5g0413901 | 71.111 | 45 | 13 | 0 | 426 | 470 | 2 | 46 | 1.76e-16 | 74.7 |
| Msa1453740 | MtrunA17_Chr8g0368841 | 49.333 | 75 | 35 | 2 | 398 | 471 | 93 | 165 | 4.71e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453740 | AT4G21880.1 | 40.316 | 759 | 367 | 6 | 129 | 855 | 118 | 822 | 0.0 | 551 |
| Msa1453740 | AT4G21880.2 | 40.316 | 759 | 367 | 6 | 129 | 855 | 74 | 778 | 0.0 | 550 |
| Msa1453740 | AT4G04790.1 | 39.216 | 765 | 378 | 5 | 127 | 858 | 95 | 805 | 0.0 | 545 |
| Msa1453740 | AT4G04790.3 | 39.216 | 765 | 378 | 5 | 127 | 858 | 91 | 801 | 0.0 | 545 |
| Msa1453740 | AT4G04790.2 | 39.554 | 718 | 348 | 4 | 173 | 858 | 5 | 668 | 2.87e-172 | 516 |
| Msa1453740 | AT1G62670.2 | 20.561 | 428 | 276 | 13 | 425 | 839 | 118 | 494 | 1.21e-12 | 72.4 |
| Msa1453740 | AT1G62670.1 | 20.561 | 428 | 276 | 13 | 425 | 839 | 118 | 494 | 1.21e-12 | 72.4 |
| Msa1453740 | AT2G15630.1 | 21.516 | 488 | 310 | 18 | 414 | 848 | 147 | 614 | 4.24e-12 | 70.5 |
| Msa1453740 | AT1G63150.2 | 19.438 | 427 | 292 | 13 | 425 | 844 | 120 | 501 | 1.95e-11 | 68.2 |
| Msa1453740 | AT1G63150.1 | 19.438 | 427 | 292 | 13 | 425 | 844 | 120 | 501 | 1.95e-11 | 68.2 |
| Msa1453740 | AT5G64320.1 | 24.599 | 187 | 107 | 5 | 478 | 662 | 441 | 595 | 5.89e-11 | 67.0 |
Find 174 sgRNAs with CRISPR-Local
Find 865 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGAGCTTGTGCCATTTC+AGG | 0.172816 | tig0034889:-16839 | Msa1453740:CDS |
| GTGTTCAGAACAATCATTTA+AGG | 0.189678 | tig0034889:-17360 | Msa1453740:intron |
| TGTTGCAGAAAGTTACTTAT+TGG | 0.197318 | tig0034889:-26273 | Msa1453740:intron |
| ACTGGGTTGACGGTTGTTTC+AGG | 0.200679 | tig0034889:-17396 | Msa1453740:CDS |
| TTGTAAATGTGAACGAAAAT+TGG | 0.202363 | tig0034889:+27903 | Msa1453740:intergenic |
| ATTCCCTCATTAATTTAAAA+AGG | 0.215848 | tig0034889:+27006 | Msa1453740:intergenic |
| TTGTCCTCTCCTACAGATTT+AGG | 0.227035 | tig0034889:+16475 | Msa1453740:intergenic |
| AAGTTCCTCACCTCTAAATT+TGG | 0.231053 | tig0034889:+24352 | Msa1453740:intergenic |
| TGACCGCAAGACACAGATTT+TGG | 0.231569 | tig0034889:-26237 | Msa1453740:CDS |
| GGAAGCTTATGATTATATTT+TGG | 0.233000 | tig0034889:-21762 | Msa1453740:intron |
| TGTTGATGTGTTTGGCTACT+TGG | 0.233196 | tig0034889:-27141 | Msa1453740:CDS |
| TGCCACATATCTAGTTGATA+TGG | 0.239951 | tig0034889:-19335 | Msa1453740:intron |
| ATGAGACTTATAACAGCTTT+TGG | 0.271340 | tig0034889:+17567 | Msa1453740:intergenic |
| GTTTCTTTCTGTAGCCTCTT+TGG | 0.287498 | tig0034889:-27381 | Msa1453740:intron |
| AATGTTCTTTCTTGAGCATT+TGG | 0.290736 | tig0034889:+19297 | Msa1453740:intergenic |
| ATCAAATATATTCCAATCAT+TGG | 0.291770 | tig0034889:-26165 | Msa1453740:CDS |
| CTGAAATGGCACAAGCTCTT+AGG | 0.310637 | tig0034889:+16840 | Msa1453740:intergenic |
| TAGGATGTATCAAGCACTTT+TGG | 0.311147 | tig0034889:-16659 | Msa1453740:CDS |
| GCGAAAATATCCTGCCATTA+TGG | 0.312907 | tig0034889:+20886 | Msa1453740:intergenic |
| ACATACAAAACAAATTTATA+TGG | 0.315892 | tig0034889:-18508 | Msa1453740:CDS |
| TGAATAATGCACGTTTGATT+TGG | 0.316179 | tig0034889:-16811 | Msa1453740:CDS |
| AGAAGCGGAGAGTTTACTTT+TGG | 0.316873 | tig0034889:-26123 | Msa1453740:CDS |
| AGCTTCTCAGTTGATAATAA+TGG | 0.327316 | tig0034889:-26056 | Msa1453740:CDS |
| GTCTCAGCTCTTGCATCTCA+TGG | 0.339314 | tig0034889:-17651 | Msa1453740:CDS |
| GGTTAATGAATTGCATGAAT+TGG | 0.340840 | tig0034889:-20939 | Msa1453740:CDS |
| TTCCTCGCAAATCTGTAATA+TGG | 0.341047 | tig0034889:+21781 | Msa1453740:intergenic |
| GATTGTGTTTGAGGGTTGAT+AGG | 0.345977 | tig0034889:+27797 | Msa1453740:intergenic |
| GAAAATGTTAAATCAGTAGA+AGG | 0.346082 | tig0034889:-16517 | Msa1453740:CDS |
| CGCACGTTTGCAGTTTGGCC+TGG | 0.348644 | tig0034889:-16927 | Msa1453740:CDS |
| TGAAATTGAACTGGGATTAC+CGG | 0.350457 | tig0034889:+26881 | Msa1453740:intergenic |
| TGGAGAGAATATGAGGTTGC+TGG | 0.350688 | tig0034889:-16791 | Msa1453740:CDS |
| CCCAGTTCAATTTCACGATT+GGG | 0.359122 | tig0034889:-26873 | Msa1453740:CDS |
| GTTTGGCCTGGATTTGCTTT+GGG | 0.360818 | tig0034889:-16915 | Msa1453740:CDS |
| TAGCTGTAAGTCTGTGAATC+AGG | 0.365887 | tig0034889:+19681 | Msa1453740:intergenic |
| CAGACTTACAGCTATTTGAT+TGG | 0.366119 | tig0034889:-19672 | Msa1453740:CDS |
| AGTTTGGCCTGGATTTGCTT+TGG | 0.367154 | tig0034889:-16916 | Msa1453740:CDS |
| CTGTCATTGTTTCATCACTT+TGG | 0.367179 | tig0034889:+17214 | Msa1453740:intergenic |
| GGTTCAAGTCAGAATGAAAA+TGG | 0.368361 | tig0034889:+27818 | Msa1453740:intergenic |
| AAATCAAGACACTGCCTTGA+AGG | 0.375464 | tig0034889:+16866 | Msa1453740:intergenic |
| ATGAGCGACGTTGAGTTTAG+TGG | 0.383734 | tig0034889:-16123 | Msa1453740:three_prime_UTR |
| ATTTCATTTAAGCTCTTTAG+TGG | 0.387099 | tig0034889:+17687 | Msa1453740:intergenic |
| AACAGAAGATGATATAAATA+TGG | 0.387476 | tig0034889:-19640 | Msa1453740:intron |
| AGTTAGCATTCCAAATTTAG+AGG | 0.389184 | tig0034889:-24362 | Msa1453740:intron |
| GTGATTAATGCGCCTAGATT+AGG | 0.390886 | tig0034889:-16030 | Msa1453740:three_prime_UTR |
| GCCACATATCTAGTTGATAT+GGG | 0.399012 | tig0034889:-19334 | Msa1453740:intron |
| ACCCAATCGTGAAATTGAAC+TGG | 0.401785 | tig0034889:+26872 | Msa1453740:intergenic |
| CAGGTTGCTTCTTCTACTCA+TGG | 0.403331 | tig0034889:-17437 | Msa1453740:CDS |
| ACTACTACTGTTGATGTGTT+TGG | 0.410755 | tig0034889:-27149 | Msa1453740:CDS |
| AGTTGTGCATAAAGAAGATC+AGG | 0.414424 | tig0034889:-27079 | Msa1453740:CDS |
| GTGGAACAAGATTGTGTTTG+AGG | 0.415426 | tig0034889:+27788 | Msa1453740:intergenic |
| GTTAATGAATTGCATGAATT+GGG | 0.417295 | tig0034889:-20938 | Msa1453740:CDS |
| ATTCGAATCTCAAATGTGAT+AGG | 0.419037 | tig0034889:-16066 | Msa1453740:three_prime_UTR |
| GGATTTGCTTTGGGCAATCA+AGG | 0.419437 | tig0034889:-16906 | Msa1453740:CDS |
| TTCTATGATGTTATCAAAGC+CGG | 0.420190 | tig0034889:-26900 | Msa1453740:CDS |
| GGCTACTTGGGCCGAGACAC+TGG | 0.425289 | tig0034889:-27128 | Msa1453740:CDS |
| TATCCTTGAGTTGCTTCAAC+AGG | 0.425971 | tig0034889:+17241 | Msa1453740:intergenic |
| GATGAAGAGGAGGATTTGTC+TGG | 0.429413 | tig0034889:-27559 | Msa1453740:CDS |
| ATGATGAAGAAAAGGAGAAA+AGG | 0.430079 | tig0034889:-27331 | Msa1453740:CDS |
| ATTATTCAAATCTCCTGAAA+TGG | 0.430566 | tig0034889:+16826 | Msa1453740:intergenic |
| TCCCAGTTCAATTTCACGAT+TGG | 0.430637 | tig0034889:-26874 | Msa1453740:CDS |
| AAATAACTTAATACATTGTA+AGG | 0.431214 | tig0034889:+16764 | Msa1453740:intergenic |
| GCAGTAGCCTTCCCAATGAT+TGG | 0.433157 | tig0034889:+26153 | Msa1453740:intergenic |
| ATGAAATGTTGCTGTGGATA+AGG | 0.436557 | tig0034889:-26845 | Msa1453740:CDS |
| ACAATGTATTAAGTTATTTG+AGG | 0.441351 | tig0034889:-16760 | Msa1453740:intron |
| ATTTAAGTGATCAAAACTAC+TGG | 0.441450 | tig0034889:-17414 | Msa1453740:CDS |
| TAGGCGTATTCTCTAATTGC+GGG | 0.441643 | tig0034889:-16959 | Msa1453740:CDS |
| TAATGTGAAGGTTGAGGATA+TGG | 0.441944 | tig0034889:-22901 | Msa1453740:intron |
| TGGCCTCTTGCATGTGTTTG+AGG | 0.443973 | tig0034889:+19712 | Msa1453740:intergenic |
| TTTGATTTGGAGAGAATATG+AGG | 0.445577 | tig0034889:-16798 | Msa1453740:CDS |
| GAGTCCGCACGTTTGCAGTT+TGG | 0.447691 | tig0034889:-16932 | Msa1453740:CDS |
| AGCTTGGCCTTGTTCCTTCA+AGG | 0.449802 | tig0034889:-16880 | Msa1453740:CDS |
| GGGAGTTGATGATGAAGAAA+AGG | 0.450224 | tig0034889:-27339 | Msa1453740:CDS |
| CTGGGTTGACGGTTGTTTCA+GGG | 0.451686 | tig0034889:-17395 | Msa1453740:CDS |
| ACTTGAGTTAATCCTAATCT+AGG | 0.455293 | tig0034889:+16018 | Msa1453740:intergenic |
| AGCCATGTACAATGCCATAA+TGG | 0.455685 | tig0034889:-20900 | Msa1453740:CDS |
| TTAAATTAATGAGGGAATGT+GGG | 0.455932 | tig0034889:-27001 | Msa1453740:CDS |
| CAAACATCAGCATCATCTCT+TGG | 0.456607 | tig0034889:+16592 | Msa1453740:intergenic |
| TAGAAGTTCAATTGGTGGTA+GGG | 0.457255 | tig0034889:-16384 | Msa1453740:three_prime_UTR |
| TCAAATATATTCCAATCATT+GGG | 0.458094 | tig0034889:-26164 | Msa1453740:CDS |
| ACTGGCGTGAAAGAGTATAA+TGG | 0.460264 | tig0034889:-27110 | Msa1453740:CDS |
| TTAACAATGAAGAAATGATC+CGG | 0.461784 | tig0034889:-26821 | Msa1453740:CDS |
| AAACAGCAGTGGTGCCTTGA+GGG | 0.461855 | tig0034889:-19736 | Msa1453740:CDS |
| TGTAGCCTCTTTGGTAGAGA+AGG | 0.467308 | tig0034889:-27372 | Msa1453740:intron |
| GGTTTGAGTAGAAGTTCAAT+TGG | 0.470090 | tig0034889:-16392 | Msa1453740:exon |
| TGAAATGTTGCTGTGGATAA+GGG | 0.473646 | tig0034889:-26844 | Msa1453740:CDS |
| TCCATTTGTGTTTCCTCTCA+CGG | 0.475171 | tig0034889:+27240 | Msa1453740:intergenic |
| CACAATCTTGTTCCACCTCC+AGG | 0.476710 | tig0034889:-27781 | Msa1453740:intron |
| CAAGAAAGCTGGTCACAACT+TGG | 0.477919 | tig0034889:-17592 | Msa1453740:CDS |
| TTTAAATTAATGAGGGAATG+TGG | 0.479424 | tig0034889:-27002 | Msa1453740:CDS |
| TGATGAAGAAAAGGAGAAAA+GGG | 0.482082 | tig0034889:-27330 | Msa1453740:CDS |
| CCATTTGTGTTTCCTCTCAC+GGG | 0.484707 | tig0034889:+27241 | Msa1453740:intergenic |
| AGAAAAGGAGAAAAGGGTTG+TGG | 0.485191 | tig0034889:-27324 | Msa1453740:CDS |
| CCCGTGAGAGGAAACACAAA+TGG | 0.498529 | tig0034889:-27241 | Msa1453740:CDS |
| ACTCTTTCACGCCAGTGTCT+CGG | 0.498681 | tig0034889:+27117 | Msa1453740:intergenic |
| AAAATGTTAAATCAGTAGAA+GGG | 0.498869 | tig0034889:-16516 | Msa1453740:CDS |
| TTTGTTTACTTTAGATGAAG+AGG | 0.500057 | tig0034889:-27572 | Msa1453740:intron |
| GTTCTTTCTTGAGCATTTGG+AGG | 0.501794 | tig0034889:+19300 | Msa1453740:intergenic |
| CGAGAATTTGCATGATGTGT+TGG | 0.502260 | tig0034889:-22868 | Msa1453740:CDS |
| GTTGATAAAATGTGTCAAGC+AGG | 0.503154 | tig0034889:-21833 | Msa1453740:CDS |
| TGGAACAAGATTGTGTTTGA+GGG | 0.503480 | tig0034889:+27789 | Msa1453740:intergenic |
| GTTGATGTGTTTGGCTACTT+GGG | 0.505119 | tig0034889:-27140 | Msa1453740:CDS |
| TACGGCGATAGTGTTAAATC+AGG | 0.505253 | tig0034889:-16541 | Msa1453740:CDS |
| ATCGAAGTGGAGAGTTGGAC+AGG | 0.507175 | tig0034889:-17456 | Msa1453740:CDS |
| TTGAGTTTAGTGGAAGGAGT+TGG | 0.516226 | tig0034889:-16113 | Msa1453740:three_prime_UTR |
| GATCAAAACTACTGGGTTGA+CGG | 0.518034 | tig0034889:-17406 | Msa1453740:CDS |
| ATCATTGGGAAGGCTACTGC+TGG | 0.519034 | tig0034889:-26150 | Msa1453740:CDS |
| TGGGCAATCAAGGACGAGCT+TGG | 0.519151 | tig0034889:-16896 | Msa1453740:CDS |
| GTAGAGAAGGTTGATTGTGA+GGG | 0.520248 | tig0034889:-27359 | Msa1453740:CDS |
| AGTCAGAATGAAAATGGTGA+TGG | 0.521003 | tig0034889:+27824 | Msa1453740:intergenic |
| TGAGGCATTTGTTATCTATG+AGG | 0.521437 | tig0034889:-17619 | Msa1453740:CDS |
| GATTGTTCTGAACACAGTAC+TGG | 0.523652 | tig0034889:+17368 | Msa1453740:intergenic |
| TCTCAGCTCTTGCATCTCAT+GGG | 0.523942 | tig0034889:-17650 | Msa1453740:CDS |
| ATAGTGATTTATCAAAGAAA+CGG | 0.525019 | tig0034889:-27274 | Msa1453740:CDS |
| GTAGAAGTTCAATTGGTGGT+AGG | 0.526759 | tig0034889:-16385 | Msa1453740:three_prime_UTR |
| TGATGGGTTTCTTCATATTG+AGG | 0.528320 | tig0034889:+27841 | Msa1453740:intergenic |
| TTGAGTAGAAGTTCAATTGG+TGG | 0.534816 | tig0034889:-16389 | Msa1453740:exon |
| TGCCATTATGGCATTGTACA+TGG | 0.536646 | tig0034889:+20898 | Msa1453740:intergenic |
| CCCAATCGTGAAATTGAACT+GGG | 0.538516 | tig0034889:+26873 | Msa1453740:intergenic |
| GCGTTATCGAAGTGGAGAGT+TGG | 0.540134 | tig0034889:-17461 | Msa1453740:CDS |
| GGTAGAGAAGGTTGATTGTG+AGG | 0.541459 | tig0034889:-27360 | Msa1453740:CDS |
| TATGAGGAGGTCAAGAAAGC+TGG | 0.542461 | tig0034889:-17603 | Msa1453740:CDS |
| TAAGAAATGTGCTTCACAAA+GGG | 0.546946 | tig0034889:-16327 | Msa1453740:three_prime_UTR |
| ATGTACAATGCCATAATGGC+AGG | 0.553859 | tig0034889:-20896 | Msa1453740:CDS |
| TGATGTATTCGCAAATATCC+CGG | 0.562159 | tig0034889:+26802 | Msa1453740:intergenic |
| GGAATGAATCGTCCCGTGAG+AGG | 0.564784 | tig0034889:-27253 | Msa1453740:CDS |
| TGATTGCCCAAAGCAAATCC+AGG | 0.566812 | tig0034889:+16909 | Msa1453740:intergenic |
| GTCAGAATGAAAATGGTGAT+GGG | 0.575314 | tig0034889:+27825 | Msa1453740:intergenic |
| TCAGTTGATAATAATGGAGG+TGG | 0.578743 | tig0034889:-26050 | Msa1453740:intron |
| TAACAATGAAGAAATGATCC+GGG | 0.581231 | tig0034889:-26820 | Msa1453740:CDS |
| ATCTCATGGGCGATTGTCTG+AGG | 0.584127 | tig0034889:-17637 | Msa1453740:CDS |
| AAGCTCATTCATTATTGCTG+TGG | 0.584394 | tig0034889:-22816 | Msa1453740:CDS |
| GCATTGTACATGGCTGTCGT+AGG | 0.585057 | tig0034889:+20908 | Msa1453740:intergenic |
| AAGAAAGAACATTTGAAGTG+TGG | 0.588495 | tig0034889:-19287 | Msa1453740:CDS |
| GAGTCCTAAATCTGTAGGAG+AGG | 0.589114 | tig0034889:-16479 | Msa1453740:CDS |
| ATATATTCCAATCATTGGGA+AGG | 0.589698 | tig0034889:-26160 | Msa1453740:CDS |
| GCGCATTAATCACTAAAATG+TGG | 0.591380 | tig0034889:+16040 | Msa1453740:intergenic |
| TTAAGAAATGTGCTTCACAA+AGG | 0.591754 | tig0034889:-16328 | Msa1453740:three_prime_UTR |
| ATCAACCTTCTCTACCAAAG+AGG | 0.592227 | tig0034889:+27367 | Msa1453740:intergenic |
| TTTGAGTATATAATTGACAT+GGG | 0.592700 | tig0034889:-26945 | Msa1453740:CDS |
| GTTTGAACGTGCATACGAGA+TGG | 0.597914 | tig0034889:-20960 | Msa1453740:CDS |
| GTTTACTTTAGATGAAGAGG+AGG | 0.597996 | tig0034889:-27569 | Msa1453740:intron |
| AAATGTTAAATCAGTAGAAG+GGG | 0.602560 | tig0034889:-16515 | Msa1453740:CDS |
| CTGGTGGTGAACGATCTGAC+CGG | 0.603581 | tig0034889:-27205 | Msa1453740:CDS |
| AAGCTGCATATGCATTAACA+AGG | 0.604339 | tig0034889:+18484 | Msa1453740:intergenic |
| GGCATTTGTTATCTATGAGG+AGG | 0.607689 | tig0034889:-17616 | Msa1453740:CDS |
| GATGCGATGCGTTATCGAAG+TGG | 0.608639 | tig0034889:-17469 | Msa1453740:CDS |
| GACACTGCCTTGAAGGAACA+AGG | 0.608673 | tig0034889:+16873 | Msa1453740:intergenic |
| AAAACAGCAGTGGTGCCTTG+AGG | 0.609367 | tig0034889:-19737 | Msa1453740:CDS |
| CATGTGTTTGAGGACCCTCA+AGG | 0.619951 | tig0034889:+19722 | Msa1453740:intergenic |
| AGCTTGAGAAACACTTGCAT+AGG | 0.625475 | tig0034889:+28970 | Msa1453740:intergenic |
| TTTAAGTGATCAAAACTACT+GGG | 0.625932 | tig0034889:-17413 | Msa1453740:CDS |
| TGACCTGTTGAAGCAACTCA+AGG | 0.627474 | tig0034889:-17244 | Msa1453740:CDS |
| GAGATGCAAGAGCTGAGACA+AGG | 0.630342 | tig0034889:+17655 | Msa1453740:intergenic |
| ATAGGCGTATTCTCTAATTG+CGG | 0.631628 | tig0034889:-16960 | Msa1453740:intron |
| GACAATGTGGTGGAATAACA+TGG | 0.635205 | tig0034889:-19265 | Msa1453740:CDS |
| AGCTTGTGGCGAATTCGAGA+AGG | 0.640410 | tig0034889:-18466 | Msa1453740:CDS |
| GCTACTGCTGGAATCAGAAG+CGG | 0.640763 | tig0034889:-26138 | Msa1453740:CDS |
| ATCCATATTACAGATTTGCG+AGG | 0.643656 | tig0034889:-21783 | Msa1453740:CDS |
| CATCCAAAATCTGTGTCTTG+CGG | 0.645043 | tig0034889:+26234 | Msa1453740:intergenic |
| TTCTCAGTTGATAATAATGG+AGG | 0.645441 | tig0034889:-26053 | Msa1453740:CDS |
| TGATGAATGTCTCGTATCAG+CGG | 0.645466 | tig0034889:+27296 | Msa1453740:intergenic |
| GTTAATGCATATGCAGCTTG+TGG | 0.650295 | tig0034889:-18480 | Msa1453740:CDS |
| GTTACTATGAAATGTTGCTG+TGG | 0.650666 | tig0034889:-26851 | Msa1453740:CDS |
| TTATTGCTGTGGTATGCACA+AGG | 0.652064 | tig0034889:-22805 | Msa1453740:intron |
| GGTCCTCAAACACATGCAAG+AGG | 0.660625 | tig0034889:-19715 | Msa1453740:CDS |
| AAAGACACTTCTGCTTTACG+AGG | 0.662394 | tig0034889:-26765 | Msa1453740:intron |
| TTGAAGTGTGGACAATGTGG+TGG | 0.663594 | tig0034889:-19275 | Msa1453740:CDS |
| CAGGCCAAACTGCAAACGTG+CGG | 0.664740 | tig0034889:+16928 | Msa1453740:intergenic |
| GCGACGTTGAGTTTAGTGGA+AGG | 0.671710 | tig0034889:-16119 | Msa1453740:three_prime_UTR |
| AGCTGCATATGCATTAACAA+GGG | 0.680546 | tig0034889:+18485 | Msa1453740:intergenic |
| GTTGTGCATAAAGAAGATCA+GGG | 0.691662 | tig0034889:-27078 | Msa1453740:CDS |
| TTGCTTCAACAGGTCAACAG+TGG | 0.705629 | tig0034889:+17251 | Msa1453740:intergenic |
| CATTTGAAGTGTGGACAATG+TGG | 0.737360 | tig0034889:-19278 | Msa1453740:CDS |
| TATTTGCGAATACATCACTG+TGG | 0.761907 | tig0034889:-26796 | Msa1453740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTTATTGATCTTAA+TGG | - | tig0034889:19184-19203 | Msa1453740:intron | 10.0% |
| !!! | TAATTTTTATTGATCTTAAT+GGG | - | tig0034889:19185-19204 | Msa1453740:intron | 10.0% |
| !! | AATATAATTAAGATATGAAT+TGG | - | tig0034889:23570-23589 | Msa1453740:intron | 10.0% |
| !! | ATATAATTAAGATATGAATT+GGG | - | tig0034889:23571-23590 | Msa1453740:intron | 10.0% |
| !!! | TATTAATTTTGACTTTTTTT+CGG | + | tig0034889:24611-24630 | Msa1453740:intergenic | 10.0% |
| !!! | AATGATACTTTTAAAAAAAT+AGG | - | tig0034889:25477-25496 | Msa1453740:intron | 10.0% |
| !! | AAAAAATAAACATAAAATAG+GGG | + | tig0034889:28767-28786 | Msa1453740:intergenic | 10.0% |
| !! | CAAAAAAATAAACATAAAAT+AGG | + | tig0034889:28769-28788 | Msa1453740:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0034889:23272-23291 | Msa1453740:intergenic | 100.0% |
| !!! | TCAAACGATATATTTTTTAA+GGG | - | tig0034889:16211-16230 | Msa1453740:three_prime_UTR | 15.0% |
| !!! | ATTTTTCCAAAAAAAAATGT+TGG | - | tig0034889:16740-16759 | Msa1453740:intron | 15.0% |
| !!! | TTTTTACCAACATTTTTTTT+TGG | + | tig0034889:16749-16768 | Msa1453740:intergenic | 15.0% |
| !!! | ATAACCTTTTTAAATTAATG+AGG | - | tig0034889:17997-18016 | Msa1453740:intron | 15.0% |
| !!! | TAACCTTTTTAAATTAATGA+GGG | - | tig0034889:17998-18017 | Msa1453740:intron | 15.0% |
| !! | TTATTGATAAATAAAAGAAC+AGG | + | tig0034889:19223-19242 | Msa1453740:intergenic | 15.0% |
| !!! | AGATTTTACAAAAGTTTTAT+AGG | + | tig0034889:19392-19411 | Msa1453740:intergenic | 15.0% |
| !!! | ATTTTTTTTTGCAAATCTAA+AGG | - | tig0034889:21238-21257 | Msa1453740:intron | 15.0% |
| !! | TTTAAATATGATAGCTTAAT+TGG | - | tig0034889:21429-21448 | Msa1453740:intron | 15.0% |
| !! | TTAAATATGATAGCTTAATT+GGG | - | tig0034889:21430-21449 | Msa1453740:intron | 15.0% |
| !!! | TGTACAAAGTTAATTTTTTT+TGG | + | tig0034889:22399-22418 | Msa1453740:intergenic | 15.0% |
| !!! | TCTTTTTTTAAATTTAATGC+AGG | - | tig0034889:23131-23150 | Msa1453740:intron | 15.0% |
| !!! | TTTTACCTATTTTATATTCA+TGG | - | tig0034889:23938-23957 | Msa1453740:intron | 15.0% |
| !!! | ATTAATTTTGACTTTTTTTC+GGG | + | tig0034889:24610-24629 | Msa1453740:intergenic | 15.0% |
| !! | TAATATGAATTTCATAAGAA+TGG | - | tig0034889:24626-24645 | Msa1453740:intron | 15.0% |
| !! | AATATGAATTTCATAAGAAT+GGG | - | tig0034889:24627-24646 | Msa1453740:intron | 15.0% |
| !!! | AAAGCATTTAAATGAATATA+TGG | - | tig0034889:25197-25216 | Msa1453740:intron | 15.0% |
| !! | AATTAATCCTTATAAAGTTT+GGG | + | tig0034889:25651-25670 | Msa1453740:intergenic | 15.0% |
| !! | AAATTAATCCTTATAAAGTT+TGG | + | tig0034889:25652-25671 | Msa1453740:intergenic | 15.0% |
| !! | ACATACAAAACAAATTTATA+TGG | - | tig0034889:26499-26518 | Msa1453740:intron | 15.0% |
| !! | ATACAATTTCAATTCAATAT+AGG | + | tig0034889:27691-27710 | Msa1453740:intergenic | 15.0% |
| !! | TTATATTATACACATTAAGT+CGG | + | tig0034889:27854-27873 | Msa1453740:intergenic | 15.0% |
| !! | AAATAACTTAATACATTGTA+AGG | + | tig0034889:28246-28265 | Msa1453740:intergenic | 15.0% |
| !!! | ACGATCTATATTTTTTTTTG+TGG | - | tig0034889:16074-16093 | Msa1453740:three_prime_UTR | 20.0% |
| !!! | ATCTATATTTTTTTTTGTGG+TGG | - | tig0034889:16077-16096 | Msa1453740:three_prime_UTR | 20.0% |
| !!! | CTCAAACGATATATTTTTTA+AGG | - | tig0034889:16210-16229 | Msa1453740:three_prime_UTR | 20.0% |
| !! | TTAGGCTCTATAAAAAAAAT+GGG | + | tig0034889:16409-16428 | Msa1453740:intergenic | 20.0% |
| !!! | TCTTTTTGTTTTTGAGTTAA+TGG | - | tig0034889:17305-17324 | Msa1453740:intron | 20.0% |
| !!! | CTTTTTGTTTTTGAGTTAAT+GGG | - | tig0034889:17306-17325 | Msa1453740:intron | 20.0% |
| !! | ATAGTGATTTATCAAAGAAA+CGG | - | tig0034889:17733-17752 | Msa1453740:intron | 20.0% |
| !! | AAAATATGTGCAAAAAAACT+AGG | - | tig0034889:17831-17850 | Msa1453740:intron | 20.0% |
| !! | ATTCCCTCATTAATTTAAAA+AGG | + | tig0034889:18004-18023 | Msa1453740:intergenic | 20.0% |
| !! | TCAATTATATACTCAAAAAG+TGG | + | tig0034889:18059-18078 | Msa1453740:intergenic | 20.0% |
| !!! | TTTTGAGTATATAATTGACA+TGG | - | tig0034889:18061-18080 | Msa1453740:intron | 20.0% |
| !! | TTTGAGTATATAATTGACAT+GGG | - | tig0034889:18062-18081 | Msa1453740:intron | 20.0% |
| !! | ATCAAATATATTCCAATCAT+TGG | - | tig0034889:18842-18861 | Msa1453740:intron | 20.0% |
| !! | TCAAATATATTCCAATCATT+GGG | - | tig0034889:18843-18862 | Msa1453740:intron | 20.0% |
| !! | AATAATGTAAATTTCAAACC+TGG | + | tig0034889:19073-19092 | Msa1453740:intergenic | 20.0% |
| !!! | AAAATTTTGCTACAACATAT+TGG | + | tig0034889:19296-19315 | Msa1453740:intergenic | 20.0% |
| !!! | GCAAAATTTTATTATTGATC+TGG | - | tig0034889:19306-19325 | Msa1453740:CDS | 20.0% |
| !!! | TGTTTTTATTAGATCTCAAA+TGG | + | tig0034889:19344-19363 | Msa1453740:intergenic | 20.0% |
| !!! | GTAGAAAATCAATTACTTTT+TGG | + | tig0034889:20121-20140 | Msa1453740:intergenic | 20.0% |
| !! | AAATTATCTGATATTGTATG+AGG | - | tig0034889:20253-20272 | Msa1453740:intron | 20.0% |
| !!! | TGCAAAATTTGTTTTAAGAT+GGG | + | tig0034889:21305-21324 | Msa1453740:intergenic | 20.0% |
| !!! | TTGCAAAATTTGTTTTAAGA+TGG | + | tig0034889:21306-21325 | Msa1453740:intergenic | 20.0% |
| !! | AAAGATAATACTATCTAACT+AGG | + | tig0034889:21412-21431 | Msa1453740:intergenic | 20.0% |
| !! | ATAAAACATAGTCGAAAATA+TGG | + | tig0034889:21638-21657 | Msa1453740:intergenic | 20.0% |
| !! | GGAAAAATTCAAAAATTTCA+GGG | + | tig0034889:21677-21696 | Msa1453740:intergenic | 20.0% |
| !! | TGGAAAAATTCAAAAATTTC+AGG | + | tig0034889:21678-21697 | Msa1453740:intergenic | 20.0% |
| !!! | ATGTTGCAATTTTTTTTCTT+TGG | - | tig0034889:22060-22079 | Msa1453740:intron | 20.0% |
| !! | CAAACTATAAGAATGAATAA+AGG | + | tig0034889:22239-22258 | Msa1453740:intergenic | 20.0% |
| !! | TTATTCATTCTTATAGTTTG+TGG | - | tig0034889:22239-22258 | Msa1453740:intron | 20.0% |
| !! | AAAAATTAACTTTGTACAGT+CGG | - | tig0034889:22401-22420 | Msa1453740:intron | 20.0% |
| !!! | ATTTTTCGTCAATAACAAAT+GGG | + | tig0034889:22575-22594 | Msa1453740:intergenic | 20.0% |
| !!! | TATTTTTCGTCAATAACAAA+TGG | + | tig0034889:22576-22595 | Msa1453740:intergenic | 20.0% |
| !!! | TTTTTTAAATTTAATGCAGG+TGG | - | tig0034889:23134-23153 | Msa1453740:intron | 20.0% |
| !! | AAACCTTTACAATTACATTA+TGG | - | tig0034889:23644-23663 | Msa1453740:intron | 20.0% |
| !! | ATTCCATAATGTAATTGTAA+AGG | + | tig0034889:23650-23669 | Msa1453740:intergenic | 20.0% |
| !! | TAACATGATATTTACATAGA+TGG | - | tig0034889:24323-24342 | Msa1453740:intron | 20.0% |
| !! | TTGAATGTAATTTCTTATTC+TGG | - | tig0034889:24480-24499 | Msa1453740:intron | 20.0% |
| !! | CATATACACTAATAGTAAAA+AGG | - | tig0034889:24916-24935 | Msa1453740:intron | 20.0% |
| !! | TAAATAAAGTCTCTTTCTAT+AGG | - | tig0034889:24968-24987 | Msa1453740:intron | 20.0% |
| !! | ATAATGGTTCAATTATCATT+AGG | - | tig0034889:25057-25076 | Msa1453740:intron | 20.0% |
| !! | TAATGGTTCAATTATCATTA+GGG | - | tig0034889:25058-25077 | Msa1453740:intron | 20.0% |
| !!! | TTTTTCTACAATTTCAGAAA+TGG | + | tig0034889:25254-25273 | Msa1453740:intergenic | 20.0% |
| !! | AACAGAAGATGATATAAATA+TGG | - | tig0034889:25367-25386 | Msa1453740:intron | 20.0% |
| !!! | GGAATACTTGATTTAAAATA+TGG | + | tig0034889:25412-25431 | Msa1453740:intergenic | 20.0% |
| !!! | TTGTTATTTCTAACTTTTCA+TGG | - | tig0034889:25439-25458 | Msa1453740:intron | 20.0% |
| !!! | GATACTTTTAAAAAAATAGG+TGG | - | tig0034889:25480-25499 | Msa1453740:intron | 20.0% |
| !! | AATCATATAATTACAGCAAT+TGG | - | tig0034889:25553-25572 | Msa1453740:intron | 20.0% |
| !! | ATCATATAATTACAGCAATT+GGG | - | tig0034889:25554-25573 | Msa1453740:intron | 20.0% |
| !! | AAATAATCTGATATTGGATT+GGG | + | tig0034889:25819-25838 | Msa1453740:intergenic | 20.0% |
| !! | TCTATGAAATAATCTGATAT+TGG | + | tig0034889:25825-25844 | Msa1453740:intergenic | 20.0% |
| !! | ATCAGATTATTTCATAGATT+TGG | - | tig0034889:25827-25846 | Msa1453740:intron | 20.0% |
| !!! | AATCTCAAAATTTGAGTTTT+AGG | - | tig0034889:25854-25873 | Msa1453740:intron | 20.0% |
| !! | AATTAATCCTTCTAATGTTT+GGG | + | tig0034889:25921-25940 | Msa1453740:intergenic | 20.0% |
| !! | AAATTAATCCTTCTAATGTT+TGG | + | tig0034889:25922-25941 | Msa1453740:intergenic | 20.0% |
| !! | CTTGTAATTACATTGAATTA+TGG | - | tig0034889:26239-26258 | Msa1453740:CDS | 20.0% |
| !! | TGTTCTACTATAAATAAATC+TGG | - | tig0034889:26866-26885 | Msa1453740:CDS | 20.0% |
| !! | GTTCTACTATAAATAAATCT+GGG | - | tig0034889:26867-26886 | Msa1453740:CDS | 20.0% |
| !! | TATATTATACACATTAAGTC+GGG | + | tig0034889:27853-27872 | Msa1453740:intergenic | 20.0% |
| !! | ACAATGTATTAAGTTATTTG+AGG | - | tig0034889:28247-28266 | Msa1453740:intron | 20.0% |
| !! | ACCATACAAATAATCAATAA+GGG | + | tig0034889:28326-28345 | Msa1453740:intergenic | 20.0% |
| !! | AACCATACAAATAATCAATA+AGG | + | tig0034889:28327-28346 | Msa1453740:intergenic | 20.0% |
| !! | AAAATGTTAAATCAGTAGAA+GGG | - | tig0034889:28491-28510 | Msa1453740:intron | 20.0% |
| !! | AAAAAGAAAAAGAAAGAAAC+TGG | - | tig0034889:28574-28593 | Msa1453740:intron | 20.0% |
| !!! | TTATCCCACAAATTTTTAAT+TGG | - | tig0034889:28655-28674 | Msa1453740:intron | 20.0% |
| !! | TAAGCCAATTAAAAATTTGT+GGG | + | tig0034889:28662-28681 | Msa1453740:intergenic | 20.0% |
| !! | TTAAGCCAATTAAAAATTTG+TGG | + | tig0034889:28663-28682 | Msa1453740:intergenic | 20.0% |
| !!! | GAATTTTACAACTCTATTTT+CGG | + | tig0034889:28852-28871 | Msa1453740:intergenic | 20.0% |
| ! | GTTAGGCTCTATAAAAAAAA+TGG | + | tig0034889:16410-16429 | Msa1453740:intergenic | 25.0% |
| !!! | CAATTTTCAAGTAAGTGATT+GGG | + | tig0034889:16445-16464 | Msa1453740:intergenic | 25.0% |
| !!! | TCAATTTTCAAGTAAGTGAT+TGG | + | tig0034889:16446-16465 | Msa1453740:intergenic | 25.0% |
| ! | AAATAGCTTATTGAACAAGT+CGG | - | tig0034889:16708-16727 | Msa1453740:intron | 25.0% |
| ! | TGAACTAGGTAATCAAATTA+TGG | + | tig0034889:16842-16861 | Msa1453740:intergenic | 25.0% |
| ! | AAGAATATGATGAAGAAGAA+AGG | + | tig0034889:16904-16923 | Msa1453740:intergenic | 25.0% |
| ! | TTGTAAATGTGAACGAAAAT+TGG | + | tig0034889:17107-17126 | Msa1453740:intergenic | 25.0% |
| !!! | GTGAAATTTTGATAGATGAA+AGG | + | tig0034889:17147-17166 | Msa1453740:intergenic | 25.0% |
| !!! | TTAATGGGTTTTGTTTTTTG+AGG | - | tig0034889:17321-17340 | Msa1453740:intron | 25.0% |
| ! | TTTGTTTACTTTAGATGAAG+AGG | - | tig0034889:17435-17454 | Msa1453740:CDS | 25.0% |
| ! | TAAATTTCACAAACACTTAC+AGG | + | tig0034889:17503-17522 | Msa1453740:intergenic | 25.0% |
| ! | TTTAAATTAATGAGGGAATG+TGG | - | tig0034889:18005-18024 | Msa1453740:intron | 25.0% |
| ! | TTAAATTAATGAGGGAATGT+GGG | - | tig0034889:18006-18025 | Msa1453740:intron | 25.0% |
| ! | TTAACAATGAAGAAATGATC+CGG | - | tig0034889:18186-18205 | Msa1453740:intron | 25.0% |
| !! | CATCAGATACAAAAGTTTTA+TGG | - | tig0034889:18507-18526 | Msa1453740:CDS | 25.0% |
| !!! | CTCAAATTCTGTTTTGTTTT+TGG | - | tig0034889:19031-19050 | Msa1453740:intron | 25.0% |
| !!! | TTTTGTTTTTGGTGTATTTG+CGG | - | tig0034889:19042-19061 | Msa1453740:intron | 25.0% |
| !!! | CAATTTTAGTTCGATTGTTT+GGG | - | tig0034889:19110-19129 | Msa1453740:intron | 25.0% |
| ! | TTTACTTATCCTCTTAAATG+TGG | - | tig0034889:19246-19265 | Msa1453740:CDS | 25.0% |
| ! | TAGAAAAGATGGTAGAAAAT+AGG | - | tig0034889:19613-19632 | Msa1453740:intron | 25.0% |
| !! | TCTTTCCTAATAGTTTTTCT+AGG | + | tig0034889:19714-19733 | Msa1453740:intergenic | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | - | tig0034889:19731-19750 | Msa1453740:CDS | 25.0% |
| ! | GAATTAAGTTCATAAAAGAG+TGG | - | tig0034889:19953-19972 | Msa1453740:intron | 25.0% |
| ! | AAGTTATGGTAAATGTTGAT+AGG | - | tig0034889:19985-20004 | Msa1453740:intron | 25.0% |
| ! | AGTTATGGTAAATGTTGATA+GGG | - | tig0034889:19986-20005 | Msa1453740:intron | 25.0% |
| !!! | AATCAATTACTTTTTGGCTA+TGG | + | tig0034889:20115-20134 | Msa1453740:intergenic | 25.0% |
| ! | GAATGAATTTATAGAAGGTT+AGG | + | tig0034889:20544-20563 | Msa1453740:intergenic | 25.0% |
| ! | TTATTTGGTTGTAGAGAATT+TGG | + | tig0034889:21111-21130 | Msa1453740:intergenic | 25.0% |
| !!! | AACTATTTACTGAAAGTGTT+GGG | - | tig0034889:21502-21521 | Msa1453740:intron | 25.0% |
| !! | TTTATCGCTATTATTGATTG+TGG | - | tig0034889:21777-21796 | Msa1453740:CDS | 25.0% |
| ! | TTTGATCAGTTATGAGATAT+CGG | - | tig0034889:21982-22001 | Msa1453740:intron | 25.0% |
| !!! | TTGTTTTTGGTACATTCTAT+CGG | - | tig0034889:22011-22030 | Msa1453740:intron | 25.0% |
| ! | GTTTGTGGTTATCAAATAAT+TGG | - | tig0034889:22254-22273 | Msa1453740:intron | 25.0% |
| !!! | ATTTTTTTTGGACTGTGTTA+AGG | + | tig0034889:22387-22406 | Msa1453740:intergenic | 25.0% |
| ! | AAGAAAAAACTAATGTAGTC+TGG | + | tig0034889:22485-22504 | Msa1453740:intergenic | 25.0% |
| !! | TTTTTCGTCAATAACAAATG+GGG | + | tig0034889:22574-22593 | Msa1453740:intergenic | 25.0% |
| ! | TATTGAAGACAGACAATATT+GGG | + | tig0034889:22705-22724 | Msa1453740:intergenic | 25.0% |
| ! | ATATTGAAGACAGACAATAT+TGG | + | tig0034889:22706-22725 | Msa1453740:intergenic | 25.0% |
| ! | CAATTACGAATTTACTAGTA+TGG | + | tig0034889:22887-22906 | Msa1453740:intergenic | 25.0% |
| !! | AATAATGCTTTTATGTAAGG+TGG | + | tig0034889:23023-23042 | Msa1453740:intergenic | 25.0% |
| !! | GGAAGCTTATGATTATATTT+TGG | - | tig0034889:23245-23264 | Msa1453740:intron | 25.0% |
| !! | TGTAATTGTAAAGGTTTGTT+TGG | + | tig0034889:23641-23660 | Msa1453740:intergenic | 25.0% |
| ! | TTTCATGAAACTACAGAAAT+GGG | + | tig0034889:23687-23706 | Msa1453740:intergenic | 25.0% |
| ! | ATTTCATGAAACTACAGAAA+TGG | + | tig0034889:23688-23707 | Msa1453740:intergenic | 25.0% |
| ! | AATATGACGAATAAGAAAGA+AGG | + | tig0034889:23757-23776 | Msa1453740:intergenic | 25.0% |
| ! | GGAAATAGAAAATGAAGAAA+CGG | + | tig0034889:23790-23809 | Msa1453740:intergenic | 25.0% |
| ! | CACAACCATGAATATAAAAT+AGG | + | tig0034889:23946-23965 | Msa1453740:intergenic | 25.0% |
| ! | GTTAATGAATTGCATGAATT+GGG | - | tig0034889:24069-24088 | Msa1453740:intron | 25.0% |
| ! | AGGTTATTTGAACTTAATGT+TGG | + | tig0034889:24235-24254 | Msa1453740:intergenic | 25.0% |
| ! | ATAAATAGTACATGCAGTTA+TGG | - | tig0034889:24350-24369 | Msa1453740:intron | 25.0% |
| !!! | TTATCTCCATTTTCAAGTTT+GGG | + | tig0034889:24407-24426 | Msa1453740:intergenic | 25.0% |
| !!! | ATTATCTCCATTTTCAAGTT+TGG | + | tig0034889:24408-24427 | Msa1453740:intergenic | 25.0% |
| ! | AAACTTGAAAATGGAGATAA+TGG | - | tig0034889:24407-24426 | Msa1453740:CDS | 25.0% |
| ! | GCGTAATTAAGTAATTTGAA+GGG | + | tig0034889:24781-24800 | Msa1453740:intergenic | 25.0% |
| ! | TGCGTAATTAAGTAATTTGA+AGG | + | tig0034889:24782-24801 | Msa1453740:intergenic | 25.0% |
| ! | ATTACTTAATTACGCATATG+TGG | - | tig0034889:24786-24805 | Msa1453740:intron | 25.0% |
| ! | TTACTTAATTACGCATATGT+GGG | - | tig0034889:24787-24806 | Msa1453740:intron | 25.0% |
| ! | TACACTAATAGTAAAAAGGA+TGG | - | tig0034889:24920-24939 | Msa1453740:intron | 25.0% |
| ! | ACACTAATAGTAAAAAGGAT+GGG | - | tig0034889:24921-24940 | Msa1453740:intron | 25.0% |
| ! | ATTAATAGTTTCTATACACG+AGG | - | tig0034889:25011-25030 | Msa1453740:intron | 25.0% |
| ! | AATGGTTCAATTATCATTAG+GGG | - | tig0034889:25059-25078 | Msa1453740:intron | 25.0% |
| !! | TTTTAAATCAAGTATTCCTG+TGG | - | tig0034889:25414-25433 | Msa1453740:intron | 25.0% |
| ! | AGTGTCTATATTCATTGTAT+AGG | - | tig0034889:25523-25542 | Msa1453740:intron | 25.0% |
| ! | GAAATAATCTGATATTGGAT+TGG | + | tig0034889:25820-25839 | Msa1453740:intergenic | 25.0% |
| !!! | AATTTAGCTTCTTTTAGATG+TGG | - | tig0034889:25937-25956 | Msa1453740:intron | 25.0% |
| !!! | ATTTAGCTTCTTTTAGATGT+GGG | - | tig0034889:25938-25957 | Msa1453740:intron | 25.0% |
| ! | GTATTAAAGAAAGAGAAAAC+AGG | + | tig0034889:26048-26067 | Msa1453740:intergenic | 25.0% |
| !! | TGTTTTCTCTTCCTTTTATA+TGG | - | tig0034889:26104-26123 | Msa1453740:CDS | 25.0% |
| ! | AGAAATGGAAACCATATAAA+AGG | + | tig0034889:26118-26137 | Msa1453740:intergenic | 25.0% |
| ! | TTCAATGTAATTACAAGTGT+CGG | + | tig0034889:26236-26255 | Msa1453740:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | tig0034889:26267-26286 | Msa1453740:CDS | 25.0% |
| ! | TTTCACATTTCATCCAAAAA+AGG | + | tig0034889:26773-26792 | Msa1453740:intergenic | 25.0% |
| ! | AGTTTGAATTCTGCTAATTT+AGG | - | tig0034889:26806-26825 | Msa1453740:CDS | 25.0% |
| ! | TTAGAAAACTGAACTTAAGT+TGG | + | tig0034889:26917-26936 | Msa1453740:intergenic | 25.0% |
| ! | TTACGATAAACTATCCTATT+TGG | - | tig0034889:27059-27078 | Msa1453740:CDS | 25.0% |
| !! | AAAACGGTTTTTATCCAAAT+AGG | + | tig0034889:27076-27095 | Msa1453740:intergenic | 25.0% |
| ! | ACAATAACTAAGCTGATTAA+GGG | + | tig0034889:27107-27126 | Msa1453740:intergenic | 25.0% |
| ! | ACTGAATTTAATTATCTGCT+TGG | + | tig0034889:27172-27191 | Msa1453740:intergenic | 25.0% |
| ! | ATTTCATTTAAGCTCTTTAG+TGG | + | tig0034889:27323-27342 | Msa1453740:intergenic | 25.0% |
| ! | ATTTAAGTGATCAAAACTAC+TGG | - | tig0034889:27593-27612 | Msa1453740:intron | 25.0% |
| ! | TTTAAGTGATCAAAACTACT+GGG | - | tig0034889:27594-27613 | Msa1453740:intron | 25.0% |
| ! | CAATTTCAATTCAATATAGG+AGG | + | tig0034889:27688-27707 | Msa1453740:intergenic | 25.0% |
| ! | ATTATCTACATGTGTATTAC+TGG | - | tig0034889:27983-28002 | Msa1453740:intron | 25.0% |
| ! | TTGTTCATGTATGTATGTAT+AGG | - | tig0034889:28029-28048 | Msa1453740:intron | 25.0% |
| ! | ATTATTCAAATCTCCTGAAA+TGG | + | tig0034889:28184-28203 | Msa1453740:intergenic | 25.0% |
| !! | TCCCTTATTGATTATTTGTA+TGG | - | tig0034889:28322-28341 | Msa1453740:intron | 25.0% |
| ! | TTGATTATTTGTATGGTTGT+AGG | - | tig0034889:28329-28348 | Msa1453740:intron | 25.0% |
| ! | TCAGAATGTCAAAAAACTTA+CGG | - | tig0034889:28448-28467 | Msa1453740:intron | 25.0% |
| ! | GAAAATGTTAAATCAGTAGA+AGG | - | tig0034889:28490-28509 | Msa1453740:intron | 25.0% |
| ! | AAATGTTAAATCAGTAGAAG+GGG | - | tig0034889:28492-28511 | Msa1453740:intron | 25.0% |
| ! | TGGAAAGAAAGAAAAAAGTA+AGG | - | tig0034889:28594-28613 | Msa1453740:intron | 25.0% |
| !!! | ACAAATTTTAGTTACTAGTG+TGG | - | tig0034889:28726-28745 | Msa1453740:intron | 25.0% |
| !! | TTCTTTTCTTTTCTTTTGAG+TGG | + | tig0034889:28824-28843 | Msa1453740:intergenic | 25.0% |
| CAAAAAATATGCAAGGTACA+GGG | + | tig0034889:16115-16134 | Msa1453740:intergenic | 30.0% | |
| GACAATGCAAAAAATATGCA+AGG | + | tig0034889:16122-16141 | Msa1453740:intergenic | 30.0% | |
| ! | TTTTAGATACAGATCGTACT+TGG | + | tig0034889:16172-16191 | Msa1453740:intergenic | 30.0% |
| !! | TGCATAGTTTTCTAGCAATA+GGG | + | tig0034889:17075-17094 | Msa1453740:intergenic | 30.0% |
| !!! | CTTTATGTGTTTTTAGTACC+TGG | + | tig0034889:17247-17266 | Msa1453740:intergenic | 30.0% |
| AGAACCAGAAATGAAAATGT+GGG | + | tig0034889:17288-17307 | Msa1453740:intergenic | 30.0% | |
| AAGAACCAGAAATGAAAATG+TGG | + | tig0034889:17289-17308 | Msa1453740:intergenic | 30.0% | |
| ATGATGAAGAAAAGGAGAAA+AGG | - | tig0034889:17676-17695 | Msa1453740:CDS | 30.0% | |
| TGATGAAGAAAAGGAGAAAA+GGG | - | tig0034889:17677-17696 | Msa1453740:CDS | 30.0% | |
| !! | AAATGGATTTTCAAAGACAC+TGG | - | tig0034889:17783-17802 | Msa1453740:intron | 30.0% |
| !! | TTGCACATATTTTGAGTAAC+CGG | + | tig0034889:17824-17843 | Msa1453740:intergenic | 30.0% |
| TTCTATGATGTTATCAAAGC+CGG | - | tig0034889:18107-18126 | Msa1453740:intron | 30.0% | |
| TAACAATGAAGAAATGATCC+GGG | - | tig0034889:18187-18206 | Msa1453740:intron | 30.0% | |
| !! | GTGAATCTATTTTTCATGTC+AGG | - | tig0034889:18268-18287 | Msa1453740:intron | 30.0% |
| GTAATGATACTGCTAAAACT+GGG | + | tig0034889:18340-18359 | Msa1453740:intergenic | 30.0% | |
| AGTAATGATACTGCTAAAAC+TGG | + | tig0034889:18341-18360 | Msa1453740:intergenic | 30.0% | |
| ! | GTGTACAACTACAAAAGTAT+TGG | + | tig0034889:18387-18406 | Msa1453740:intergenic | 30.0% |
| ! | TACTAAATGACAGGTTCTAA+AGG | - | tig0034889:18474-18493 | Msa1453740:CDS | 30.0% |
| !! | ACTAAATGACAGGTTCTAAA+GGG | - | tig0034889:18475-18494 | Msa1453740:CDS | 30.0% |
| ATGTACTTGGAATACAATCA+TGG | + | tig0034889:18592-18611 | Msa1453740:intergenic | 30.0% | |
| GTAATTAAAGTGATTGTTCC+AGG | - | tig0034889:18632-18651 | Msa1453740:intron | 30.0% | |
| TGTTGCAGAAAGTTACTTAT+TGG | - | tig0034889:18734-18753 | Msa1453740:intron | 30.0% | |
| ATATATTCCAATCATTGGGA+AGG | - | tig0034889:18847-18866 | Msa1453740:intron | 30.0% | |
| !! | AGCTTCTCAGTTGATAATAA+TGG | - | tig0034889:18951-18970 | Msa1453740:intron | 30.0% |
| !! | TTCTCAGTTGATAATAATGG+AGG | - | tig0034889:18954-18973 | Msa1453740:intron | 30.0% |
| !!! | GCAATTTTAGTTCGATTGTT+TGG | - | tig0034889:19109-19128 | Msa1453740:intron | 30.0% |
| GTTTGGGCTACATAATAAAA+TGG | - | tig0034889:19126-19145 | Msa1453740:intron | 30.0% | |
| TTATAGGAGATACATGTACA+AGG | + | tig0034889:19376-19395 | Msa1453740:intergenic | 30.0% | |
| ! | TCTACCATCTTTTCTACTAT+AGG | + | tig0034889:19609-19628 | Msa1453740:intergenic | 30.0% |
| GAAGACCTAGAAAAACTATT+AGG | - | tig0034889:19706-19725 | Msa1453740:CDS | 30.0% | |
| GTTCTATCATACACCATATT+GGG | + | tig0034889:19759-19778 | Msa1453740:intergenic | 30.0% | |
| TGTTCTATCATACACCATAT+TGG | + | tig0034889:19760-19779 | Msa1453740:intergenic | 30.0% | |
| TGGTGTATGATAGAACATTA+TGG | - | tig0034889:19763-19782 | Msa1453740:intron | 30.0% | |
| TGTATGATAGAACATTATGG+TGG | - | tig0034889:19766-19785 | Msa1453740:intron | 30.0% | |
| !!! | TCTCAAGGATTTTTAGTTCT+AGG | + | tig0034889:19883-19902 | Msa1453740:intergenic | 30.0% |
| GAACTAAAAATCCTTGAGAA+TGG | - | tig0034889:19884-19903 | Msa1453740:intron | 30.0% | |
| TTAAGTTCATAAAAGAGTGG+TGG | - | tig0034889:19956-19975 | Msa1453740:intron | 30.0% | |
| GAAATATGTGCAAATGAGTA+GGG | - | tig0034889:20047-20066 | Msa1453740:intron | 30.0% | |
| TCAAGATAGAAAACAAAGTC+AGG | - | tig0034889:20185-20204 | Msa1453740:intron | 30.0% | |
| CAAGATAGAAAACAAAGTCA+GGG | - | tig0034889:20186-20205 | Msa1453740:intron | 30.0% | |
| AAGATAGAAAACAAAGTCAG+GGG | - | tig0034889:20187-20206 | Msa1453740:intron | 30.0% | |
| TTGTAATTCCTACTCAGTAT+TGG | - | tig0034889:20291-20310 | Msa1453740:intron | 30.0% | |
| AATTTACAGCAGACTTCATT+TGG | + | tig0034889:20358-20377 | Msa1453740:intergenic | 30.0% | |
| ! | GACTACAAAAATCTCTTTTG+TGG | - | tig0034889:20380-20399 | Msa1453740:intron | 30.0% |
| TTGCAACCACAATAAAACTT+TGG | + | tig0034889:20447-20466 | Msa1453740:intergenic | 30.0% | |
| ! | CTTTTCACATATTTAAGCGA+TGG | - | tig0034889:20493-20512 | Msa1453740:intron | 30.0% |
| ACAGGGAATGAATTTATAGA+AGG | + | tig0034889:20549-20568 | Msa1453740:intergenic | 30.0% | |
| TCATCGTTAATATGCATACA+GGG | + | tig0034889:20566-20585 | Msa1453740:intergenic | 30.0% | |
| ATCATCGTTAATATGCATAC+AGG | + | tig0034889:20567-20586 | Msa1453740:intergenic | 30.0% | |
| AGTTAGCATTCCAAATTTAG+AGG | - | tig0034889:20645-20664 | Msa1453740:intron | 30.0% | |
| ! | AACAGTTTGCAAGTGTTTTA+TGG | - | tig0034889:20736-20755 | Msa1453740:intron | 30.0% |
| TTAACTATCCTAAAAGCCTA+AGG | - | tig0034889:21047-21066 | Msa1453740:intron | 30.0% | |
| TAGAGATATAAAACCATTCC+CGG | + | tig0034889:21183-21202 | Msa1453740:intergenic | 30.0% | |
| AAGAAAGTGATACTAAAGCA+AGG | - | tig0034889:21378-21397 | Msa1453740:intron | 30.0% | |
| ! | GAACTATTTACTGAAAGTGT+TGG | - | tig0034889:21501-21520 | Msa1453740:intron | 30.0% |
| ATACCGATCATTGACAAAAT+AGG | + | tig0034889:21713-21732 | Msa1453740:intergenic | 30.0% | |
| ! | TAAGTGCTGTTGTTAAAAAG+AGG | + | tig0034889:21920-21939 | Msa1453740:intergenic | 30.0% |
| !!! | ATATCGGCAAGTTTTGTTTT+TGG | - | tig0034889:21998-22017 | Msa1453740:intron | 30.0% |
| TTACGAATTTACTAGTATGG+TGG | + | tig0034889:22884-22903 | Msa1453740:intergenic | 30.0% | |
| ! | CGCAATAATGCTTTTATGTA+AGG | + | tig0034889:23026-23045 | Msa1453740:intergenic | 30.0% |
| ATTAGATTACACACACATAC+AGG | + | tig0034889:23305-23324 | Msa1453740:intergenic | 30.0% | |
| ATGACATATTGTTCGAAGAA+AGG | + | tig0034889:23338-23357 | Msa1453740:intergenic | 30.0% | |
| ATATGTCATAGAAATTTGCG+AGG | - | tig0034889:23349-23368 | Msa1453740:intron | 30.0% | |
| !! | TTTGAGTTGTATTGTATCAC+AGG | - | tig0034889:23424-23443 | Msa1453740:intron | 30.0% |
| TTTCACATGTTGTAGCAAAT+GGG | + | tig0034889:23538-23557 | Msa1453740:intergenic | 30.0% | |
| GCATAAGTAATGAAGAAGTA+AGG | - | tig0034889:23709-23728 | Msa1453740:intron | 30.0% | |
| AAGTAATGAAGAAGTAAGGA+TGG | - | tig0034889:23713-23732 | Msa1453740:intron | 30.0% | |
| AGTAATGAAGAAGTAAGGAT+GGG | - | tig0034889:23714-23733 | Msa1453740:intron | 30.0% | |
| ! | ATGAACCTTCATTTTCAGTA+AGG | + | tig0034889:23817-23836 | Msa1453740:intergenic | 30.0% |
| TTAACTGCAAATAGTGATGA+TGG | + | tig0034889:23863-23882 | Msa1453740:intergenic | 30.0% | |
| CATCACTATTTGCAGTTAAA+TGG | - | tig0034889:23864-23883 | Msa1453740:intron | 30.0% | |
| ! | CTACAATGCTAATCTTTTGA+AGG | - | tig0034889:23980-23999 | Msa1453740:intron | 30.0% |
| GGTTAATGAATTGCATGAAT+TGG | - | tig0034889:24068-24087 | Msa1453740:intron | 30.0% | |
| !!! | TATCTCCATTTTCAAGTTTG+GGG | + | tig0034889:24406-24425 | Msa1453740:intergenic | 30.0% |
| ! | TAATGGTTGTTTGTTGAACA+AGG | - | tig0034889:24424-24443 | Msa1453740:intron | 30.0% |
| ! | AATGGTTGTTTGTTGAACAA+GGG | - | tig0034889:24425-24444 | Msa1453740:intron | 30.0% |
| TGTGAAGAAAGATAGTATTC+TGG | - | tig0034889:24547-24566 | Msa1453740:intron | 30.0% | |
| !!! | AACTCGTTTTTTTATGCCAT+GGG | + | tig0034889:24663-24682 | Msa1453740:intergenic | 30.0% |
| !!! | AAACTCGTTTTTTTATGCCA+TGG | + | tig0034889:24664-24683 | Msa1453740:intergenic | 30.0% |
| TACTTAATTACGCATATGTG+GGG | - | tig0034889:24788-24807 | Msa1453740:intron | 30.0% | |
| ACGAGGTCTTAATAAGAATA+TGG | - | tig0034889:25028-25047 | Msa1453740:intron | 30.0% | |
| AAGAATATGGCTGTCAATAA+TGG | - | tig0034889:25041-25060 | Msa1453740:intron | 30.0% | |
| ATGGTTCAATTATCATTAGG+GGG | - | tig0034889:25060-25079 | Msa1453740:intron | 30.0% | |
| ATACAAACTAAAAATGGAGG+GGG | + | tig0034889:25113-25132 | Msa1453740:intergenic | 30.0% | |
| CATACAAACTAAAAATGGAG+GGG | + | tig0034889:25114-25133 | Msa1453740:intergenic | 30.0% | |
| CCATACAAACTAAAAATGGA+GGG | + | tig0034889:25115-25134 | Msa1453740:intergenic | 30.0% | |
| !!! | CCTCCATTTTTAGTTTGTAT+GGG | - | tig0034889:25113-25132 | Msa1453740:intron | 30.0% |
| !!! | CTCCATTTTTAGTTTGTATG+GGG | - | tig0034889:25114-25133 | Msa1453740:intron | 30.0% |
| !!! | TCCATTTTTAGTTTGTATGG+GGG | - | tig0034889:25115-25134 | Msa1453740:intron | 30.0% |
| AAATTGTAGAAAAACAGCAG+TGG | - | tig0034889:25260-25279 | Msa1453740:intron | 30.0% | |
| ATGATTGCCCAAACTTTATA+AGG | - | tig0034889:25641-25660 | Msa1453740:intron | 30.0% | |
| AATGTTCTTTCTTGAGCATT+TGG | + | tig0034889:25713-25732 | Msa1453740:intergenic | 30.0% | |
| ! | AAGAAAGAACATTTGAAGTG+TGG | - | tig0034889:25720-25739 | Msa1453740:intron | 30.0% |
| ! | CTTTTTGTCTACATGCAATT+CGG | - | tig0034889:25974-25993 | Msa1453740:intron | 30.0% |
| ATATGGTTTCCATTTCTTGA+TGG | - | tig0034889:26121-26140 | Msa1453740:CDS | 30.0% | |
| TATGGTTTCCATTTCTTGAT+GGG | - | tig0034889:26122-26141 | Msa1453740:CDS | 30.0% | |
| ATTAAGGGCAGAAGAAAAAA+CGG | + | tig0034889:27092-27111 | Msa1453740:intergenic | 30.0% | |
| CACAATAACTAAGCTGATTA+AGG | + | tig0034889:27108-27127 | Msa1453740:intergenic | 30.0% | |
| ! | ATGAGACTTATAACAGCTTT+TGG | + | tig0034889:27443-27462 | Msa1453740:intergenic | 30.0% |
| CTGTTATAAGTCTCATTGTA+AGG | - | tig0034889:27447-27466 | Msa1453740:intron | 30.0% | |
| GTGTTCAGAACAATCATTTA+AGG | - | tig0034889:27647-27666 | Msa1453740:intron | 30.0% | |
| TGTTCATACTTCATTGTATC+TGG | - | tig0034889:27726-27745 | Msa1453740:intron | 30.0% | |
| GTTCATACTTCATTGTATCT+GGG | - | tig0034889:27727-27746 | Msa1453740:intron | 30.0% | |
| ACTCAGTAATGAATATATGC+TGG | - | tig0034889:27886-27905 | Msa1453740:CDS | 30.0% | |
| CTCAGTAATGAATATATGCT+GGG | - | tig0034889:27887-27906 | Msa1453740:CDS | 30.0% | |
| ! | TGTTTGTTTGAAACTCTTTC+AGG | - | tig0034889:27920-27939 | Msa1453740:CDS | 30.0% |
| TGAATAATGCACGTTTGATT+TGG | - | tig0034889:28196-28215 | Msa1453740:intron | 30.0% | |
| !! | TTTGATTTGGAGAGAATATG+AGG | - | tig0034889:28209-28228 | Msa1453740:intron | 30.0% |
| AAAAAGAGTCCTAAATCTGT+AGG | - | tig0034889:28523-28542 | Msa1453740:intron | 30.0% | |
| TTAAGAAATGTGCTTCACAA+AGG | - | tig0034889:28679-28698 | Msa1453740:intron | 30.0% | |
| TAAGAAATGTGCTTCACAAA+GGG | - | tig0034889:28680-28699 | Msa1453740:intron | 30.0% | |
| !!! | AATTTTAGTTACTAGTGTGG+TGG | - | tig0034889:28729-28748 | Msa1453740:intron | 30.0% |
| ATTCGAATCTCAAATGTGAT+AGG | - | tig0034889:28941-28960 | Msa1453740:intron | 30.0% | |
| GCAAAAAATATGCAAGGTAC+AGG | + | tig0034889:16116-16135 | Msa1453740:intergenic | 35.0% | |
| GTACGATCTGTATCTAAAAG+TGG | - | tig0034889:16173-16192 | Msa1453740:three_prime_UTR | 35.0% | |
| ATACTTAAAGAATATGCCCC+AGG | - | tig0034889:16366-16385 | Msa1453740:three_prime_UTR | 35.0% | |
| !! | TTGGGTTGAAATGATTGGTT+AGG | + | tig0034889:16427-16446 | Msa1453740:intergenic | 35.0% |
| !! | AGTGATTGGGTTGAAATGAT+TGG | + | tig0034889:16432-16451 | Msa1453740:intergenic | 35.0% |
| GTGTGATTAGTGAATGAACT+AGG | + | tig0034889:16856-16875 | Msa1453740:intergenic | 35.0% | |
| ACTAATCACACTCTTTGTGA+GGG | - | tig0034889:16865-16884 | Msa1453740:CDS | 35.0% | |
| TAAGAACAATGCGAAGAAGA+TGG | + | tig0034889:17043-17062 | Msa1453740:intergenic | 35.0% | |
| !! | GCATAGTTTTCTAGCAATAG+GGG | + | tig0034889:17074-17093 | Msa1453740:intergenic | 35.0% |
| !! | GTGCATAGTTTTCTAGCAAT+AGG | + | tig0034889:17076-17095 | Msa1453740:intergenic | 35.0% |
| !! | TGATGGGTTTCTTCATATTG+AGG | + | tig0034889:17169-17188 | Msa1453740:intergenic | 35.0% |
| GTCAGAATGAAAATGGTGAT+GGG | + | tig0034889:17185-17204 | Msa1453740:intergenic | 35.0% | |
| AGTCAGAATGAAAATGGTGA+TGG | + | tig0034889:17186-17205 | Msa1453740:intergenic | 35.0% | |
| GGTTCAAGTCAGAATGAAAA+TGG | + | tig0034889:17192-17211 | Msa1453740:intergenic | 35.0% | |
| TGGAACAAGATTGTGTTTGA+GGG | + | tig0034889:17221-17240 | Msa1453740:intergenic | 35.0% | |
| !!! | TATGTGTTTTTAGTACCTGG+AGG | + | tig0034889:17244-17263 | Msa1453740:intergenic | 35.0% |
| GTTTACTTTAGATGAAGAGG+AGG | - | tig0034889:17438-17457 | Msa1453740:CDS | 35.0% | |
| TGTGAAATTTACTGTGAGAG+TGG | - | tig0034889:17512-17531 | Msa1453740:intron | 35.0% | |
| ACTACTACTGTTGATGTGTT+TGG | - | tig0034889:17858-17877 | Msa1453740:intron | 35.0% | |
| AGTTGTGCATAAAGAAGATC+AGG | - | tig0034889:17928-17947 | Msa1453740:intron | 35.0% | |
| GTTGTGCATAAAGAAGATCA+GGG | - | tig0034889:17929-17948 | Msa1453740:intron | 35.0% | |
| TGAAATTGAACTGGGATTAC+CGG | + | tig0034889:18129-18148 | Msa1453740:intergenic | 35.0% | |
| GTTACTATGAAATGTTGCTG+TGG | - | tig0034889:18156-18175 | Msa1453740:intron | 35.0% | |
| ATGAAATGTTGCTGTGGATA+AGG | - | tig0034889:18162-18181 | Msa1453740:intron | 35.0% | |
| TGAAATGTTGCTGTGGATAA+GGG | - | tig0034889:18163-18182 | Msa1453740:intron | 35.0% | |
| TGATGTATTCGCAAATATCC+CGG | + | tig0034889:18208-18227 | Msa1453740:intergenic | 35.0% | |
| TATTTGCGAATACATCACTG+TGG | - | tig0034889:18211-18230 | Msa1453740:intron | 35.0% | |
| GCAGTATCATTACTAACATG+TGG | - | tig0034889:18347-18366 | Msa1453740:intron | 35.0% | |
| ACTAACATGTGGCAATTTCA+AGG | - | tig0034889:18358-18377 | Msa1453740:intron | 35.0% | |
| !! | TCATCAAAAGCATCATGTGT+AGG | + | tig0034889:18409-18428 | Msa1453740:intergenic | 35.0% |
| ATTCCCACTACATGCTATAT+GGG | + | tig0034889:18455-18474 | Msa1453740:intergenic | 35.0% | |
| TATTCCCACTACATGCTATA+TGG | + | tig0034889:18456-18475 | Msa1453740:intergenic | 35.0% | |
| TAGTGGGAATACTAAATGAC+AGG | - | tig0034889:18465-18484 | Msa1453740:CDS | 35.0% | |
| !! | CTAAATGACAGGTTCTAAAG+GGG | - | tig0034889:18476-18495 | Msa1453740:CDS | 35.0% |
| TTGTATTCCAAGTACATTGC+TGG | - | tig0034889:18595-18614 | Msa1453740:intron | 35.0% | |
| TGGTTCAAAATTAGTGCATG+TGG | - | tig0034889:18661-18680 | Msa1453740:intron | 35.0% | |
| ACTTATCAGAACAATTCTGC+TGG | - | tig0034889:18690-18709 | Msa1453740:intron | 35.0% | |
| !! | TCAGTTGATAATAATGGAGG+TGG | - | tig0034889:18957-18976 | Msa1453740:intron | 35.0% |
| !! | GACGTCACTTATTTCTAGAA+TGG | + | tig0034889:19425-19444 | Msa1453740:intergenic | 35.0% |
| !!! | CGCTTACTTTATTTTCGTGT+TGG | + | tig0034889:19492-19511 | Msa1453740:intergenic | 35.0% |
| AGCACCTATAGTAGAAAAGA+TGG | - | tig0034889:19602-19621 | Msa1453740:intron | 35.0% | |
| AGATGGTAGAAAATAGGCTT+AGG | - | tig0034889:19619-19638 | Msa1453740:intron | 35.0% | |
| AAAATAGGCTTAGGTGGTTT+GGG | - | tig0034889:19628-19647 | Msa1453740:intron | 35.0% | |
| AAAGAGAAGAGTAGATCACA+TGG | - | tig0034889:19656-19675 | Msa1453740:CDS | 35.0% | |
| AGTCAGATGAAAAGAGGTAA+AGG | - | tig0034889:19684-19703 | Msa1453740:CDS | 35.0% | |
| ! | TAATGAGTTGGATCCCAATA+TGG | - | tig0034889:19743-19762 | Msa1453740:intron | 35.0% |
| ! | TGGTAAATGTTGATAGGGTA+AGG | - | tig0034889:19991-20010 | Msa1453740:intron | 35.0% |
| GGAAATATGTGCAAATGAGT+AGG | - | tig0034889:20046-20065 | Msa1453740:intron | 35.0% | |
| TGAGTAGGGTTCAAATGATA+AGG | - | tig0034889:20061-20080 | Msa1453740:intron | 35.0% | |
| !!! | TTTTTGGCTATGGAGCAAAT+TGG | + | tig0034889:20105-20124 | Msa1453740:intergenic | 35.0% |
| TTGGCGATTAGAATTGAACA+TGG | + | tig0034889:20339-20358 | Msa1453740:intergenic | 35.0% | |
| ! | TTTTGTGGCCATACTGAATA+AGG | - | tig0034889:20395-20414 | Msa1453740:intron | 35.0% |
| !!! | CGTGTTCCAAAGTTTTATTG+TGG | - | tig0034889:20438-20457 | Msa1453740:intron | 35.0% |
| GGTTGCAAATGCACTAATTT+AGG | - | tig0034889:20459-20478 | Msa1453740:intron | 35.0% | |
| AAGTTCCTCACCTCTAAATT+TGG | + | tig0034889:20658-20677 | Msa1453740:intergenic | 35.0% | |
| ! | GAACTTTTCATGAATGCTGA+TGG | - | tig0034889:20672-20691 | Msa1453740:intron | 35.0% |
| ! | AGCTTCAAATACTTTGGAAG+TGG | + | tig0034889:20836-20855 | Msa1453740:intergenic | 35.0% |
| TGCAACAGCTTCAAATACTT+TGG | + | tig0034889:20842-20861 | Msa1453740:intergenic | 35.0% | |
| CAAATGAGATTGTCCAAACA+GGG | - | tig0034889:20879-20898 | Msa1453740:intron | 35.0% | |
| ! | TCCTAAAAGCCTAAGGTATT+TGG | - | tig0034889:21054-21073 | Msa1453740:intron | 35.0% |
| ! | ACCAAATACCTTAGGCTTTT+AGG | + | tig0034889:21058-21077 | Msa1453740:intergenic | 35.0% |
| AGAGATATAAAACCATTCCC+GGG | + | tig0034889:21182-21201 | Msa1453740:intergenic | 35.0% | |
| ! | ATTTTTCCCTATATGACTGC+CGG | - | tig0034889:21354-21373 | Msa1453740:intron | 35.0% |
| CTTTAGTATCACTTTCTTGC+CGG | + | tig0034889:21376-21395 | Msa1453740:intergenic | 35.0% | |
| ! | GAATTTTTCCATGAGACTTG+TGG | - | tig0034889:21687-21706 | Msa1453740:intron | 35.0% |
| ! | TGGCCTATTTTGTCAATGAT+CGG | - | tig0034889:21707-21726 | Msa1453740:intron | 35.0% |
| ! | TCGCTATTATTGATTGTGGA+AGG | - | tig0034889:21781-21800 | Msa1453740:CDS | 35.0% |
| TTGTTAAAAAGAGGCCATGT+CGG | + | tig0034889:21911-21930 | Msa1453740:intergenic | 35.0% | |
| TTGCAACATACAACTACTGT+GGG | + | tig0034889:22049-22068 | Msa1453740:intergenic | 35.0% | |
| ATTGCAACATACAACTACTG+TGG | + | tig0034889:22050-22069 | Msa1453740:intergenic | 35.0% | |
| !! | ATGCACTGTTGATAATGTGA+AGG | - | tig0034889:22094-22113 | Msa1453740:intron | 35.0% |
| !! | TGTTGATAATGTGAAGGTTG+AGG | - | tig0034889:22100-22119 | Msa1453740:intron | 35.0% |
| TAATGTGAAGGTTGAGGATA+TGG | - | tig0034889:22106-22125 | Msa1453740:intron | 35.0% | |
| AAGCTCATTCATTATTGCTG+TGG | - | tig0034889:22191-22210 | Msa1453740:intron | 35.0% | |
| ! | TGTTATCGTTTTCCTTCTCA+TGG | + | tig0034889:22291-22310 | Msa1453740:intergenic | 35.0% |
| AACAATCTAACTCTGCTTCA+GGG | - | tig0034889:22341-22360 | Msa1453740:intron | 35.0% | |
| ! | AAAATTGTCTTGTCACTTGG+AGG | + | tig0034889:22519-22538 | Msa1453740:intergenic | 35.0% |
| CCAAAAATTGTCTTGTCACT+TGG | + | tig0034889:22522-22541 | Msa1453740:intergenic | 35.0% | |
| ! | CCAAGTGACAAGACAATTTT+TGG | - | tig0034889:22519-22538 | Msa1453740:intron | 35.0% |
| AGTAATGCCAAGTACAGAAA+GGG | + | tig0034889:22550-22569 | Msa1453740:intergenic | 35.0% | |
| TAGTAATGCCAAGTACAGAA+AGG | + | tig0034889:22551-22570 | Msa1453740:intergenic | 35.0% | |
| !! | TGGAAAATTAATTTGCCCCT+CGG | - | tig0034889:22791-22810 | Msa1453740:intron | 35.0% |
| ATGTTAAACTCATACTCCGA+GGG | + | tig0034889:22810-22829 | Msa1453740:intergenic | 35.0% | |
| AATGTTAAACTCATACTCCG+AGG | + | tig0034889:22811-22830 | Msa1453740:intergenic | 35.0% | |
| CGGAGTATGAGTTTAACATT+TGG | - | tig0034889:22811-22830 | Msa1453740:CDS | 35.0% | |
| ! | TTAGTGTTTTCGTATGCCTT+TGG | - | tig0034889:23076-23095 | Msa1453740:intron | 35.0% |
| ! | TAGTGTTTTCGTATGCCTTT+GGG | - | tig0034889:23077-23096 | Msa1453740:intron | 35.0% |
| ! | GTTGATAAAATGTGTCAAGC+AGG | - | tig0034889:23174-23193 | Msa1453740:intron | 35.0% |
| ATCCATATTACAGATTTGCG+AGG | - | tig0034889:23224-23243 | Msa1453740:intron | 35.0% | |
| TTCCTCGCAAATCTGTAATA+TGG | + | tig0034889:23229-23248 | Msa1453740:intergenic | 35.0% | |
| ATTACACACACATACAGGAA+GGG | + | tig0034889:23300-23319 | Msa1453740:intergenic | 35.0% | |
| CTAATGCTTCATTGCTTCAA+TGG | + | tig0034889:23402-23421 | Msa1453740:intergenic | 35.0% | |
| !! | GTATTTCCCCTTGCTTTTAA+GGG | - | tig0034889:23505-23524 | Msa1453740:intron | 35.0% |
| TTCACATGTTGTAGCAAATG+GGG | + | tig0034889:23537-23556 | Msa1453740:intergenic | 35.0% | |
| CTTTCACATGTTGTAGCAAA+TGG | + | tig0034889:23539-23558 | Msa1453740:intergenic | 35.0% | |
| GAAACTACAGAAATGGGAAA+AGG | + | tig0034889:23681-23700 | Msa1453740:intergenic | 35.0% | |
| ! | CTTCATTTTCAGTAAGGCAA+GGG | + | tig0034889:23811-23830 | Msa1453740:intergenic | 35.0% |
| ATCGAATCTGTTCCATCATA+AGG | - | tig0034889:23835-23854 | Msa1453740:intron | 35.0% | |
| ! | GTTTGGTACACTTTTGTGTA+AGG | - | tig0034889:23901-23920 | Msa1453740:intron | 35.0% |
| ! | TACATGCAGTTATGGTCTTA+TGG | - | tig0034889:24358-24377 | Msa1453740:intron | 35.0% |
| CTAAACCCCAAACTTGAAAA+TGG | - | tig0034889:24398-24417 | Msa1453740:CDS | 35.0% | |
| ! | ATGGTTGTTTGTTGAACAAG+GGG | - | tig0034889:24426-24445 | Msa1453740:intron | 35.0% |
| ! | ACCTTTTTATTGAAGGAGCA+GGG | + | tig0034889:24717-24736 | Msa1453740:intergenic | 35.0% |
| ! | CAGCATGACCTTTTTATTGA+AGG | + | tig0034889:24724-24743 | Msa1453740:intergenic | 35.0% |
| TAAAAAGGTCATGCTGTAAG+TGG | - | tig0034889:24728-24747 | Msa1453740:intron | 35.0% | |
| ! | AGTGTCATAATTTGCAGTGT+AGG | + | tig0034889:24820-24839 | Msa1453740:intergenic | 35.0% |
| !! | ATGACACTCTTTTGAAGAAC+AGG | - | tig0034889:24832-24851 | Msa1453740:intron | 35.0% |
| !! | TGACACTCTTTTGAAGAACA+GGG | - | tig0034889:24833-24852 | Msa1453740:intron | 35.0% |
| TCTTATTGCTTCCTAAATGC+AGG | + | tig0034889:24875-24894 | Msa1453740:intergenic | 35.0% | |
| TACAAACTAAAAATGGAGGG+GGG | + | tig0034889:25112-25131 | Msa1453740:intergenic | 35.0% | |
| !!! | CCCTCCATTTTTAGTTTGTA+TGG | - | tig0034889:25112-25131 | Msa1453740:intron | 35.0% |
| CCCATACAAACTAAAAATGG+AGG | + | tig0034889:25116-25135 | Msa1453740:intergenic | 35.0% | |
| !!! | CCATTTTTAGTTTGTATGGG+GGG | - | tig0034889:25116-25135 | Msa1453740:intron | 35.0% |
| CAGACTTACAGCTATTTGAT+TGG | - | tig0034889:25335-25354 | Msa1453740:intron | 35.0% | |
| GTTAGAAATAACAATGCCAC+AGG | + | tig0034889:25433-25452 | Msa1453740:intergenic | 35.0% | |
| ! | TCTAACTTTTCATGGTGACA+TGG | - | tig0034889:25447-25466 | Msa1453740:intron | 35.0% |
| TGAATATAGACACTACTCAC+AGG | + | tig0034889:25517-25536 | Msa1453740:intergenic | 35.0% | |
| ! | TGCCACATATCTAGTTGATA+TGG | - | tig0034889:25672-25691 | Msa1453740:intron | 35.0% |
| ! | GCCACATATCTAGTTGATAT+GGG | - | tig0034889:25673-25692 | Msa1453740:intron | 35.0% |
| TCCCATATCAACTAGATATG+TGG | + | tig0034889:25677-25696 | Msa1453740:intergenic | 35.0% | |
| CATGTCTCAAATACAACACA+GGG | + | tig0034889:26070-26089 | Msa1453740:intergenic | 35.0% | |
| ACATGTCTCAAATACAACAC+AGG | + | tig0034889:26071-26090 | Msa1453740:intergenic | 35.0% | |
| AGCTGCATATGCATTAACAA+GGG | + | tig0034889:26525-26544 | Msa1453740:intergenic | 35.0% | |
| AAGCTGCATATGCATTAACA+AGG | + | tig0034889:26526-26545 | Msa1453740:intergenic | 35.0% | |
| ! | TCTAGTTCAGAAGTTAGCTA+CGG | + | tig0034889:26725-26744 | Msa1453740:intergenic | 35.0% |
| TAGCTAACTTCTGAACTAGA+CGG | - | tig0034889:26725-26744 | Msa1453740:intron | 35.0% | |
| !!! | CGACTTTTGAAGTCCTTTTT+TGG | - | tig0034889:26757-26776 | Msa1453740:intron | 35.0% |
| GCAACTTAAGTTCTGCTAAT+AGG | - | tig0034889:26828-26847 | Msa1453740:CDS | 35.0% | |
| !! | GTAGAACAGAAAGCTTGTTA+TGG | + | tig0034889:26854-26873 | Msa1453740:intergenic | 35.0% |
| AAAACTAATCTGACAACAGC+AGG | + | tig0034889:27027-27046 | Msa1453740:intergenic | 35.0% | |
| AGCTTAGTTATTGTGAACTG+TGG | - | tig0034889:27113-27132 | Msa1453740:CDS | 35.0% | |
| TTCATTGTGTGTACTTGTGA+AGG | - | tig0034889:27207-27226 | Msa1453740:CDS | 35.0% | |
| CAAGTTATGTTTCACATTGC+AGG | - | tig0034889:27277-27296 | Msa1453740:CDS | 35.0% | |
| !! | TGAGGCATTTGTTATCTATG+AGG | - | tig0034889:27388-27407 | Msa1453740:intron | 35.0% |
| ACAAGGTATAAGGTTGAAAG+TGG | + | tig0034889:27502-27521 | Msa1453740:intergenic | 35.0% | |
| CTGTCATTGTTTCATCACTT+TGG | + | tig0034889:27796-27815 | Msa1453740:intergenic | 35.0% | |
| TTATACACATTAAGTCGGGA+GGG | + | tig0034889:27849-27868 | Msa1453740:intergenic | 35.0% | |
| ATTATACACATTAAGTCGGG+AGG | + | tig0034889:27850-27869 | Msa1453740:intergenic | 35.0% | |
| ATAGGCGTATTCTCTAATTG+CGG | - | tig0034889:28047-28066 | Msa1453740:intron | 35.0% | |
| ! | TAGGATGTATCAAGCACTTT+TGG | - | tig0034889:28348-28367 | Msa1453740:intron | 35.0% |
| GGTTTGAGTAGAAGTTCAAT+TGG | - | tig0034889:28615-28634 | Msa1453740:intron | 35.0% | |
| TTGAGTAGAAGTTCAATTGG+TGG | - | tig0034889:28618-28637 | Msa1453740:intron | 35.0% | |
| ! | TAGAAGTTCAATTGGTGGTA+GGG | - | tig0034889:28623-28642 | Msa1453740:intron | 35.0% |
| GCGCATTAATCACTAAAATG+TGG | + | tig0034889:28970-28989 | Msa1453740:intergenic | 35.0% | |
| AGCTTGAGAAACACTTGCAT+AGG | + | tig0034889:16040-16059 | None:intergenic | 40.0% | |
| !!! | ATTTTTTTTTGTGGTGGCCG+AGG | - | tig0034889:16083-16102 | Msa1453740:three_prime_UTR | 40.0% |
| GAAATGTTAACTAGTGCCTC+CGG | - | tig0034889:16233-16252 | Msa1453740:three_prime_UTR | 40.0% | |
| AAATGTTAACTAGTGCCTCC+GGG | - | tig0034889:16234-16253 | Msa1453740:three_prime_UTR | 40.0% | |
| CACTAATCACACTCTTTGTG+AGG | - | tig0034889:16864-16883 | Msa1453740:CDS | 40.0% | |
| AAGAAGATGGTGAATCTGTG+CGG | + | tig0034889:17030-17049 | Msa1453740:intergenic | 40.0% | |
| ! | GATTGTGTTTGAGGGTTGAT+AGG | + | tig0034889:17213-17232 | Msa1453740:intergenic | 40.0% |
| GTGGAACAAGATTGTGTTTG+AGG | + | tig0034889:17222-17241 | Msa1453740:intergenic | 40.0% | |
| CCAGAAATGAAAATGTGGGT+CGG | + | tig0034889:17284-17303 | Msa1453740:intergenic | 40.0% | |
| GTTTCTTTCTGTAGCCTCTT+TGG | - | tig0034889:17626-17645 | Msa1453740:CDS | 40.0% | |
| ATCAACCTTCTCTACCAAAG+AGG | + | tig0034889:17643-17662 | Msa1453740:intergenic | 40.0% | |
| ! | GTAGAGAAGGTTGATTGTGA+GGG | - | tig0034889:17648-17667 | Msa1453740:CDS | 40.0% |
| !! | GGGAGTTGATGATGAAGAAA+AGG | - | tig0034889:17668-17687 | Msa1453740:CDS | 40.0% |
| AGAAAAGGAGAAAAGGGTTG+TGG | - | tig0034889:17683-17702 | Msa1453740:CDS | 40.0% | |
| TGATGAATGTCTCGTATCAG+CGG | + | tig0034889:17714-17733 | Msa1453740:intergenic | 40.0% | |
| TCCATTTGTGTTTCCTCTCA+CGG | + | tig0034889:17770-17789 | Msa1453740:intergenic | 40.0% | |
| ! | TGGATTTTCAAAGACACTGG+TGG | - | tig0034889:17786-17805 | Msa1453740:intron | 40.0% |
| TGTTGATGTGTTTGGCTACT+TGG | - | tig0034889:17866-17885 | Msa1453740:intron | 40.0% | |
| GTTGATGTGTTTGGCTACTT+GGG | - | tig0034889:17867-17886 | Msa1453740:intron | 40.0% | |
| ! | ACTGGCGTGAAAGAGTATAA+TGG | - | tig0034889:17897-17916 | Msa1453740:intron | 40.0% |
| TCCCAGTTCAATTTCACGAT+TGG | - | tig0034889:18133-18152 | Msa1453740:intron | 40.0% | |
| CCCAATCGTGAAATTGAACT+GGG | + | tig0034889:18137-18156 | Msa1453740:intergenic | 40.0% | |
| CCCAGTTCAATTTCACGATT+GGG | - | tig0034889:18134-18153 | Msa1453740:intron | 40.0% | |
| ACCCAATCGTGAAATTGAAC+TGG | + | tig0034889:18138-18157 | Msa1453740:intergenic | 40.0% | |
| AAAGACACTTCTGCTTTACG+AGG | - | tig0034889:18242-18261 | Msa1453740:intron | 40.0% | |
| ! | GCACTAATTTTGAACCACCA+AGG | + | tig0034889:18658-18677 | Msa1453740:intergenic | 40.0% |
| CATCCAAAATCTGTGTCTTG+CGG | + | tig0034889:18776-18795 | Msa1453740:intergenic | 40.0% | |
| ! | AGAAGCGGAGAGTTTACTTT+TGG | - | tig0034889:18884-18903 | Msa1453740:intron | 40.0% |
| !! | CTTTTGGATTTGAGAGCATG+TGG | - | tig0034889:18900-18919 | Msa1453740:intron | 40.0% |
| ! | TGCTACAACATATTGGTGTC+AGG | + | tig0034889:19289-19308 | Msa1453740:intergenic | 40.0% |
| AGAAATAAGTGACGTCAGAC+CGG | - | tig0034889:19429-19448 | Msa1453740:intron | 40.0% | |
| ! | TGTTTTATGGTACGGAGTGT+TGG | - | tig0034889:19455-19474 | Msa1453740:intron | 40.0% |
| !! | GTTTTATGGTACGGAGTGTT+GGG | - | tig0034889:19456-19475 | Msa1453740:intron | 40.0% |
| CACATATGAGTATGTTGCGT+TGG | - | tig0034889:19515-19534 | Msa1453740:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | - | tig0034889:19548-19567 | Msa1453740:intron | 40.0% | |
| TGGTAGAAAATAGGCTTAGG+TGG | - | tig0034889:19622-19641 | Msa1453740:intron | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | - | tig0034889:19627-19646 | Msa1453740:intron | 40.0% | |
| ! | TGTTGTCGTTGTTGTTGTTG+TGG | - | tig0034889:19835-19854 | Msa1453740:intron | 40.0% |
| AATCCTTGAGAATGGAGAAG+AGG | - | tig0034889:19892-19911 | Msa1453740:intron | 40.0% | |
| TTTCCTCTTCTCCATTCTCA+AGG | + | tig0034889:19898-19917 | Msa1453740:intergenic | 40.0% | |
| AGAATGGAGAAGAGGAAAGA+TGG | - | tig0034889:19900-19919 | Msa1453740:intron | 40.0% | |
| AGTTCATAAAAGAGTGGTGG+AGG | - | tig0034889:19959-19978 | Msa1453740:intron | 40.0% | |
| ! | AGTGGTGGAGGAAAAAGTTA+TGG | - | tig0034889:19971-19990 | Msa1453740:intron | 40.0% |
| AGGGTTCAAATGATAAGGAG+TGG | - | tig0034889:20066-20085 | Msa1453740:intron | 40.0% | |
| TCAAATGATAAGGAGTGGTC+AGG | - | tig0034889:20071-20090 | Msa1453740:intron | 40.0% | |
| CAAATGATAAGGAGTGGTCA+GGG | - | tig0034889:20072-20091 | Msa1453740:intron | 40.0% | |
| AAATGATAAGGAGTGGTCAG+GGG | - | tig0034889:20073-20092 | Msa1453740:intron | 40.0% | |
| TATCAACAATGAGCCAGACT+TGG | - | tig0034889:20223-20242 | Msa1453740:intron | 40.0% | |
| TAATTTCTGACCACCAAGTC+TGG | + | tig0034889:20239-20258 | Msa1453740:intergenic | 40.0% | |
| TTCTAGTGCCAATACTGAGT+AGG | + | tig0034889:20302-20321 | Msa1453740:intergenic | 40.0% | |
| CAACACCACCTTATTCAGTA+TGG | + | tig0034889:20406-20425 | Msa1453740:intergenic | 40.0% | |
| TTATAGAAGGTTAGGCCTTC+TGG | + | tig0034889:20536-20555 | Msa1453740:intergenic | 40.0% | |
| GCATTCCAAATTTAGAGGTG+AGG | - | tig0034889:20650-20669 | Msa1453740:intron | 40.0% | |
| TAAACAACCCATGATGACAC+TGG | - | tig0034889:20695-20714 | Msa1453740:intron | 40.0% | |
| AAACAACCCATGATGACACT+GGG | - | tig0034889:20696-20715 | Msa1453740:intron | 40.0% | |
| AACACTTGCAAACTGTTGAC+AGG | + | tig0034889:20733-20752 | Msa1453740:intergenic | 40.0% | |
| GACAAAGAAAGCCAATCTAG+TGG | - | tig0034889:20792-20811 | Msa1453740:intron | 40.0% | |
| AAAGAAAGCCAATCTAGTGG+TGG | - | tig0034889:20795-20814 | Msa1453740:intron | 40.0% | |
| AAGAAAGCCAATCTAGTGGT+GGG | - | tig0034889:20796-20815 | Msa1453740:intron | 40.0% | |
| GAAGCTGTTGCAAAAAGAAC+AGG | - | tig0034889:20850-20869 | Msa1453740:intron | 40.0% | |
| GTTGCAAAAAGAACAGGCAA+AGG | - | tig0034889:20856-20875 | Msa1453740:intron | 40.0% | |
| GCAAATGAGATTGTCCAAAC+AGG | - | tig0034889:20878-20897 | Msa1453740:intron | 40.0% | |
| TTCAATCCAACAGCACTCAT+GGG | + | tig0034889:20965-20984 | Msa1453740:intergenic | 40.0% | |
| TTTCAATCCAACAGCACTCA+TGG | + | tig0034889:20966-20985 | Msa1453740:intergenic | 40.0% | |
| GTGCTAACACCAAATACCTT+AGG | + | tig0034889:21066-21085 | Msa1453740:intergenic | 40.0% | |
| !! | TCAGGGGTGTCAAACTTATT+TGG | + | tig0034889:21126-21145 | Msa1453740:intergenic | 40.0% |
| TGCTCTGTATCTCGAAATAG+TGG | - | tig0034889:21533-21552 | Msa1453740:intron | 40.0% | |
| GCTCTGTATCTCGAAATAGT+GGG | - | tig0034889:21534-21553 | Msa1453740:intron | 40.0% | |
| AAAATAGGCCACAAGTCTCA+TGG | + | tig0034889:21698-21717 | Msa1453740:intergenic | 40.0% | |
| !! | TTGGGGTTTTATGTCGGAAA+TGG | + | tig0034889:21819-21838 | Msa1453740:intergenic | 40.0% |
| !!! | AGTGCTTTGGGGTTTTATGT+CGG | + | tig0034889:21825-21844 | Msa1453740:intergenic | 40.0% |
| CGAGAATTTGCATGATGTGT+TGG | - | tig0034889:22139-22158 | Msa1453740:intron | 40.0% | |
| TTATTGCTGTGGTATGCACA+AGG | - | tig0034889:22202-22221 | Msa1453740:intron | 40.0% | |
| GCATAAACTCATCCATGAGA+AGG | - | tig0034889:22276-22295 | Msa1453740:intron | 40.0% | |
| AGAGTTAGATTGTTCTGTGG+GGG | + | tig0034889:22335-22354 | Msa1453740:intergenic | 40.0% | |
| CAGAGTTAGATTGTTCTGTG+GGG | + | tig0034889:22336-22355 | Msa1453740:intergenic | 40.0% | |
| GCAGAGTTAGATTGTTCTGT+GGG | + | tig0034889:22337-22356 | Msa1453740:intergenic | 40.0% | |
| AGCAGAGTTAGATTGTTCTG+TGG | + | tig0034889:22338-22357 | Msa1453740:intergenic | 40.0% | |
| GAACAATCTAACTCTGCTTC+AGG | - | tig0034889:22340-22359 | Msa1453740:intron | 40.0% | |
| TGAAGGCTTGACTAATCTCA+TGG | - | tig0034889:22633-22652 | Msa1453740:intron | 40.0% | |
| TGTTAAACTCATACTCCGAG+GGG | + | tig0034889:22809-22828 | Msa1453740:intergenic | 40.0% | |
| TTACACACACATACAGGAAG+GGG | + | tig0034889:23299-23318 | Msa1453740:intergenic | 40.0% | |
| GATTACACACACATACAGGA+AGG | + | tig0034889:23301-23320 | Msa1453740:intergenic | 40.0% | |
| TCATTGCTTCAATGGCTCAA+AGG | + | tig0034889:23394-23413 | Msa1453740:intergenic | 40.0% | |
| ! | TTGTATCACAGGAGTGTGAT+AGG | - | tig0034889:23435-23454 | Msa1453740:intron | 40.0% |
| ! | TGTATCACAGGAGTGTGATA+GGG | - | tig0034889:23436-23455 | Msa1453740:intron | 40.0% |
| GATAGGGGAATTGGGTATTA+TGG | - | tig0034889:23452-23471 | Msa1453740:intron | 40.0% | |
| ATACCAAGCCGTATCAATGT+GGG | + | tig0034889:23489-23508 | Msa1453740:intergenic | 40.0% | |
| AATACCAAGCCGTATCAATG+TGG | + | tig0034889:23490-23509 | Msa1453740:intergenic | 40.0% | |
| !! | GGTATTTCCCCTTGCTTTTA+AGG | - | tig0034889:23504-23523 | Msa1453740:intron | 40.0% |
| ! | CCTTCATTTTCAGTAAGGCA+AGG | + | tig0034889:23812-23831 | Msa1453740:intergenic | 40.0% |
| CCTTGCCTTACTGAAAATGA+AGG | - | tig0034889:23809-23828 | Msa1453740:intron | 40.0% | |
| AGTTAAATGGCGACATATGC+AGG | - | tig0034889:23877-23896 | Msa1453740:intron | 40.0% | |
| AGCCATGTACAATGCCATAA+TGG | - | tig0034889:24107-24126 | Msa1453740:intron | 40.0% | |
| TGCCATTATGGCATTGTACA+TGG | + | tig0034889:24112-24131 | Msa1453740:intergenic | 40.0% | |
| ATGTACAATGCCATAATGGC+AGG | - | tig0034889:24111-24130 | Msa1453740:intron | 40.0% | |
| GCGAAAATATCCTGCCATTA+TGG | + | tig0034889:24124-24143 | Msa1453740:intergenic | 40.0% | |
| !! | TTTTCGCGAGGTATCATTGT+TGG | - | tig0034889:24137-24156 | Msa1453740:intron | 40.0% |
| CTGGTCTGAAAATAAGACCA+CGG | - | tig0034889:24499-24518 | Msa1453740:intron | 40.0% | |
| AGTAATAGCCCTGGTATTTC+AGG | + | tig0034889:24525-24544 | Msa1453740:intergenic | 40.0% | |
| ! | CCTTTTTATTGAAGGAGCAG+GGG | + | tig0034889:24716-24735 | Msa1453740:intergenic | 40.0% |
| ! | GACCTTTTTATTGAAGGAGC+AGG | + | tig0034889:24718-24737 | Msa1453740:intergenic | 40.0% |
| AAAATCCATCCTCGCTAAGT+GGG | + | tig0034889:24755-24774 | Msa1453740:intergenic | 40.0% | |
| AAAAATCCATCCTCGCTAAG+TGG | + | tig0034889:24756-24775 | Msa1453740:intergenic | 40.0% | |
| !! | ACTCTTTTGAAGAACAGGGA+AGG | - | tig0034889:24837-24856 | Msa1453740:intron | 40.0% |
| ! | CATTAGGGGGTTTTCAATTG+CGG | - | tig0034889:25073-25092 | Msa1453740:intron | 40.0% |
| ACAAACTAAAAATGGAGGGG+GGG | + | tig0034889:25111-25130 | Msa1453740:intergenic | 40.0% | |
| CCCCCCATACAAACTAAAAA+TGG | + | tig0034889:25119-25138 | Msa1453740:intergenic | 40.0% | |
| ! | CTGTGAATCAGGTTTTACGT+TGG | + | tig0034889:25318-25337 | Msa1453740:intergenic | 40.0% |
| TAGCTGTAAGTCTGTGAATC+AGG | + | tig0034889:25329-25348 | Msa1453740:intergenic | 40.0% | |
| GTTCTTTCTTGAGCATTTGG+AGG | + | tig0034889:25710-25729 | Msa1453740:intergenic | 40.0% | |
| ! | CATTTGAAGTGTGGACAATG+TGG | - | tig0034889:25729-25748 | Msa1453740:intron | 40.0% |
| ! | GACAATGTGGTGGAATAACA+TGG | - | tig0034889:25742-25761 | Msa1453740:intron | 40.0% |
| CATATAGTGTGGACAATGTG+TGG | - | tig0034889:25782-25801 | Msa1453740:intron | 40.0% | |
| ! | ACCTAGGGAGCAACATTTTA+GGG | + | tig0034889:25890-25909 | Msa1453740:intergenic | 40.0% |
| TAAAATGTTGCTCCCTAGGT+GGG | - | tig0034889:25890-25909 | Msa1453740:intron | 40.0% | |
| CTGTCTCAACTGTACAATAG+TGG | + | tig0034889:26000-26019 | Msa1453740:intergenic | 40.0% | |
| AGAAAGAGAAAACAGGAGAG+TGG | + | tig0034889:26041-26060 | Msa1453740:intergenic | 40.0% | |
| !! | GTAATTACAAGTGTCGGTGT+CGG | + | tig0034889:26230-26249 | Msa1453740:intergenic | 40.0% |
| GTTAATGCATATGCAGCTTG+TGG | - | tig0034889:26527-26546 | Msa1453740:intron | 40.0% | |
| CGAATTCGAGAAGGCAAAAA+AGG | - | tig0034889:26550-26569 | Msa1453740:intron | 40.0% | |
| TCGAGAAGGCAAAAAAGGTA+TGG | - | tig0034889:26555-26574 | Msa1453740:intron | 40.0% | |
| ! | CGAGAAGGCAAAAAAGGTAT+GGG | - | tig0034889:26556-26575 | Msa1453740:intron | 40.0% |
| CTACATGTAGACTTCCATGT+TGG | - | tig0034889:26654-26673 | Msa1453740:intron | 40.0% | |
| TTATTGTGAACTGTGGATGC+AGG | - | tig0034889:27120-27139 | Msa1453740:CDS | 40.0% | |
| TATTGTGAACTGTGGATGCA+GGG | - | tig0034889:27121-27140 | Msa1453740:CDS | 40.0% | |
| !! | GGCATTTGTTATCTATGAGG+AGG | - | tig0034889:27391-27410 | Msa1453740:intron | 40.0% |
| ! | GATCAAAACTACTGGGTTGA+CGG | - | tig0034889:27601-27620 | Msa1453740:intron | 40.0% |
| ! | GATTGTTCTGAACACAGTAC+TGG | + | tig0034889:27642-27661 | Msa1453740:intergenic | 40.0% |
| ! | TATCCTTGAGTTGCTTCAAC+AGG | + | tig0034889:27769-27788 | Msa1453740:intergenic | 40.0% |
| !! | CTGCTGTTTGTTATGAACCA+TGG | - | tig0034889:27943-27962 | Msa1453740:CDS | 40.0% |
| CTCTGTTTGACAATATGCCA+TGG | + | tig0034889:27963-27982 | Msa1453740:intergenic | 40.0% | |
| TAGGCGTATTCTCTAATTGC+GGG | - | tig0034889:28048-28067 | Msa1453740:intron | 40.0% | |
| AAATCAAGACACTGCCTTGA+AGG | + | tig0034889:28144-28163 | Msa1453740:intergenic | 40.0% | |
| ! | TATCAAGCACTTTTGGCATC+AGG | - | tig0034889:28355-28374 | Msa1453740:intron | 40.0% |
| CAAACATCAGCATCATCTCT+TGG | + | tig0034889:28418-28437 | Msa1453740:intergenic | 40.0% | |
| TACGGCGATAGTGTTAAATC+AGG | - | tig0034889:28466-28485 | Msa1453740:intron | 40.0% | |
| TTGTCCTCTCCTACAGATTT+AGG | + | tig0034889:28535-28554 | Msa1453740:intergenic | 40.0% | |
| ! | GTAGAAGTTCAATTGGTGGT+AGG | - | tig0034889:28622-28641 | Msa1453740:intron | 40.0% |
| TTGAGTTTAGTGGAAGGAGT+TGG | - | tig0034889:28894-28913 | Msa1453740:intron | 40.0% | |
| AATGTTAACTAGTGCCTCCG+GGG | - | tig0034889:16235-16254 | Msa1453740:three_prime_UTR | 45.0% | |
| TCTTGTTAACGAGTGCTCCT+GGG | + | tig0034889:16386-16405 | Msa1453740:intergenic | 45.0% | |
| ATCTGTGCGGTTTGTGAAGT+TGG | + | tig0034889:17017-17036 | Msa1453740:intergenic | 45.0% | |
| !!! | GTGTTTTTAGTACCTGGAGG+TGG | + | tig0034889:17241-17260 | Msa1453740:intergenic | 45.0% |
| ! | CCGACCCACATTTTCATTTC+TGG | - | tig0034889:17281-17300 | Msa1453740:intron | 45.0% |
| GATGAAGAGGAGGATTTGTC+TGG | - | tig0034889:17448-17467 | Msa1453740:CDS | 45.0% | |
| !! | GGCTCTGATTTTCAGCTTTC+TGG | - | tig0034889:17469-17488 | Msa1453740:CDS | 45.0% |
| ATTCTCCACTCTTCTCATCG+TGG | + | tig0034889:17559-17578 | Msa1453740:intergenic | 45.0% | |
| TGTAGCCTCTTTGGTAGAGA+AGG | - | tig0034889:17635-17654 | Msa1453740:CDS | 45.0% | |
| ! | GGTAGAGAAGGTTGATTGTG+AGG | - | tig0034889:17647-17666 | Msa1453740:CDS | 45.0% |
| CCATTTGTGTTTCCTCTCAC+GGG | + | tig0034889:17769-17788 | Msa1453740:intergenic | 45.0% | |
| ACACTTCTGCTTTACGAGGT+AGG | - | tig0034889:18246-18265 | Msa1453740:intron | 45.0% | |
| CCACCCATATAGCATGTAGT+GGG | - | tig0034889:18449-18468 | Msa1453740:intron | 45.0% | |
| CTAGATGCCAGCAATGTACT+TGG | + | tig0034889:18605-18624 | Msa1453740:intergenic | 45.0% | |
| AAAGTGATTGTTCCAGGCCT+TGG | - | tig0034889:18638-18657 | Msa1453740:intron | 45.0% | |
| ! | AATTTTGAACCACCAAGGCC+TGG | + | tig0034889:18653-18672 | Msa1453740:intergenic | 45.0% |
| ! | TGACCGCAAGACACAGATTT+TGG | - | tig0034889:18770-18789 | Msa1453740:intron | 45.0% |
| GTGTGCTTGCCACATTTAAG+AGG | + | tig0034889:19258-19277 | Msa1453740:intergenic | 45.0% | |
| AAATGTGGCAAGCACACTAC+AGG | - | tig0034889:19261-19280 | Msa1453740:CDS | 45.0% | |
| ! | ACCGGCGATGTTTTATGGTA+CGG | - | tig0034889:19447-19466 | Msa1453740:intron | 45.0% |
| TCCGTACCATAAAACATCGC+CGG | + | tig0034889:19451-19470 | Msa1453740:intergenic | 45.0% | |
| !! | AGTATGTTGCGTTGGTTGAG+TGG | - | tig0034889:19523-19542 | Msa1453740:intron | 45.0% |
| GTTGAGTGGTAAGACTAGAC+AGG | - | tig0034889:19537-19556 | Msa1453740:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | - | tig0034889:19542-19561 | Msa1453740:intron | 45.0% | |
| CCTCAACTCTCTCTCTCTAA+TGG | + | tig0034889:19581-19600 | Msa1453740:intergenic | 45.0% | |
| CCATTAGAGAGAGAGAGTTG+AGG | - | tig0034889:19578-19597 | Msa1453740:intron | 45.0% | |
| GAGAAGAGTAGATCACATGG+AGG | - | tig0034889:19659-19678 | Msa1453740:CDS | 45.0% | |
| GAGGAGAGTCAGATGAAAAG+AGG | - | tig0034889:19678-19697 | Msa1453740:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0034889:19812-19831 | Msa1453740:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0034889:19813-19832 | Msa1453740:intergenic | 45.0% |
| ! | GTTGATAGGGTAAGGAACAG+AGG | - | tig0034889:19999-20018 | Msa1453740:intron | 45.0% |
| TAAGGAACAGAGGAAACACC+TGG | - | tig0034889:20009-20028 | Msa1453740:intron | 45.0% | |
| AATGATAAGGAGTGGTCAGG+GGG | - | tig0034889:20074-20093 | Msa1453740:intron | 45.0% | |
| GAAAACAAAGTCAGGGGAGA+TGG | - | tig0034889:20193-20212 | Msa1453740:intron | 45.0% | |
| TGTGGCCATACTGAATAAGG+TGG | - | tig0034889:20398-20417 | Msa1453740:intron | 45.0% | |
| CTAACCTGTTATCCTCCAGA+AGG | - | tig0034889:20518-20537 | Msa1453740:intron | 45.0% | |
| GTTTGAGTGCATTCCCTGTT+TGG | + | tig0034889:20895-20914 | Msa1453740:intergenic | 45.0% | |
| ACAGGGAATGCACTCAAACA+TGG | - | tig0034889:20896-20915 | Msa1453740:CDS | 45.0% | |
| CAGGGAATGCACTCAAACAT+GGG | - | tig0034889:20897-20916 | Msa1453740:CDS | 45.0% | |
| TTCTTGCCGGCAGTCATATA+GGG | + | tig0034889:21363-21382 | Msa1453740:intergenic | 45.0% | |
| TTTCTTGCCGGCAGTCATAT+AGG | + | tig0034889:21364-21383 | Msa1453740:intergenic | 45.0% | |
| !! | AAATAGTGGGCATGCTGGAA+AGG | - | tig0034889:21547-21566 | Msa1453740:intron | 45.0% |
| TGGAAAGGATGGAGTGTAGT+TGG | - | tig0034889:21562-21581 | Msa1453740:intron | 45.0% | |
| GGAAAGGATGGAGTGTAGTT+GGG | - | tig0034889:21563-21582 | Msa1453740:intron | 45.0% | |
| !! | GGGTTTTATGTCGGAAATGG+TGG | + | tig0034889:21816-21835 | Msa1453740:intergenic | 45.0% |
| !! | TGAAGGATGGAAGTGCTTTG+GGG | + | tig0034889:21836-21855 | Msa1453740:intergenic | 45.0% |
| !! | GTGAAGGATGGAAGTGCTTT+GGG | + | tig0034889:21837-21856 | Msa1453740:intergenic | 45.0% |
| CACTTCCATCCTTCACGAAT+CGG | - | tig0034889:21841-21860 | Msa1453740:CDS | 45.0% | |
| GGTTCTTCCCTTTCTGTACT+TGG | - | tig0034889:22540-22559 | Msa1453740:intron | 45.0% | |
| CCTTCAAATGCAAGTGGACA+GGG | + | tig0034889:22619-22638 | Msa1453740:intergenic | 45.0% | |
| GTCAAGCCTTCAAATGCAAG+TGG | + | tig0034889:22625-22644 | Msa1453740:intergenic | 45.0% | |
| GCAAAAGACAGAGTCAAGCA+AGG | + | tig0034889:22754-22773 | Msa1453740:intergenic | 45.0% | |
| !! | TGCGTTACGACTTTGAGATG+TGG | - | tig0034889:22771-22790 | Msa1453740:intron | 45.0% |
| AGTGCAGTGCTATGTAAGGT+GGG | + | tig0034889:22962-22981 | Msa1453740:intergenic | 45.0% | |
| TAGTGCAGTGCTATGTAAGG+TGG | + | tig0034889:22963-22982 | Msa1453740:intergenic | 45.0% | |
| CACTAGTGCAGTGCTATGTA+AGG | + | tig0034889:22966-22985 | Msa1453740:intergenic | 45.0% | |
| ! | GTATCACAGGAGTGTGATAG+GGG | - | tig0034889:23437-23456 | Msa1453740:intron | 45.0% |
| ! | AGGAGTGTGATAGGGGAATT+GGG | - | tig0034889:23444-23463 | Msa1453740:intron | 45.0% |
| !! | TTTCCCCTTGCTTTTAAGGG+AGG | - | tig0034889:23508-23527 | Msa1453740:intron | 45.0% |
| !! | TTCCCCTTGCTTTTAAGGGA+GGG | - | tig0034889:23509-23528 | Msa1453740:intron | 45.0% |
| AACCCTCCCTTAAAAGCAAG+GGG | + | tig0034889:23514-23533 | Msa1453740:intergenic | 45.0% | |
| GAACCCTCCCTTAAAAGCAA+GGG | + | tig0034889:23515-23534 | Msa1453740:intergenic | 45.0% | |
| GTTTGAACGTGCATACGAGA+TGG | - | tig0034889:24047-24066 | Msa1453740:intron | 45.0% | |
| ! | AATGGCAGGATATTTTCGCG+AGG | - | tig0034889:24125-24144 | Msa1453740:intron | 45.0% |
| AGAGTCTAGACATGCAAGTC+AGG | + | tig0034889:24258-24277 | Msa1453740:intergenic | 45.0% | |
| TTGGGGTTTAGACAGAAGCT+TGG | + | tig0034889:24389-24408 | Msa1453740:intergenic | 45.0% | |
| CTTCACAACAGTAATAGCCC+TGG | + | tig0034889:24534-24553 | Msa1453740:intergenic | 45.0% | |
| AATGGGATCAAGTCTACCCA+TGG | - | tig0034889:24644-24663 | Msa1453740:intron | 45.0% | |
| CCCCTGCTCCTTCAATAAAA+AGG | - | tig0034889:24713-24732 | Msa1453740:intron | 45.0% | |
| AAATCCATCCTCGCTAAGTG+GGG | + | tig0034889:24754-24773 | Msa1453740:intergenic | 45.0% | |
| AATTACGCATATGTGGGGTG+AGG | - | tig0034889:24793-24812 | Msa1453740:intron | 45.0% | |
| TTTGAAGAACAGGGAAGGCT+TGG | - | tig0034889:24842-24861 | Msa1453740:intron | 45.0% | |
| ! | TTGGCCACTTTCCTGCATTT+AGG | - | tig0034889:24861-24880 | Msa1453740:intron | 45.0% |
| GCTTCCTAAATGCAGGAAAG+TGG | + | tig0034889:24868-24887 | Msa1453740:intergenic | 45.0% | |
| AAACTAAAAATGGAGGGGGG+GGG | + | tig0034889:25109-25128 | Msa1453740:intergenic | 45.0% | |
| CAAACTAAAAATGGAGGGGG+GGG | + | tig0034889:25110-25129 | Msa1453740:intergenic | 45.0% | |
| TCCAACCAAAAGCTAGCTGA+AGG | - | tig0034889:25614-25633 | Msa1453740:intron | 45.0% | |
| CCAACCAAAAGCTAGCTGAA+GGG | - | tig0034889:25615-25634 | Msa1453740:intron | 45.0% | |
| CAACCAAAAGCTAGCTGAAG+GGG | - | tig0034889:25616-25635 | Msa1453740:intron | 45.0% | |
| TTGAAGTGTGGACAATGTGG+TGG | - | tig0034889:25732-25751 | Msa1453740:intron | 45.0% | |
| ATGCACTCGCTCATATAGTG+TGG | - | tig0034889:25771-25790 | Msa1453740:intron | 45.0% | |
| ACCCTAAAATGTTGCTCCCT+AGG | - | tig0034889:25886-25905 | Msa1453740:intron | 45.0% | |
| ! | CACCTAGGGAGCAACATTTT+AGG | + | tig0034889:25891-25910 | Msa1453740:intergenic | 45.0% |
| CTAAAATGTTGCTCCCTAGG+TGG | - | tig0034889:25889-25908 | Msa1453740:intron | 45.0% | |
| AAAATGTTGCTCCCTAGGTG+GGG | - | tig0034889:25891-25910 | Msa1453740:intron | 45.0% | |
| GGTTTCCATTTCTTGATGGG+AGG | - | tig0034889:26125-26144 | Msa1453740:CDS | 45.0% | |
| !! | TCATAGGCAGGCACTGAATA+GGG | + | tig0034889:26154-26173 | Msa1453740:intergenic | 45.0% |
| !! | TTCATAGGCAGGCACTGAAT+AGG | + | tig0034889:26155-26174 | Msa1453740:intergenic | 45.0% |
| ACACTGCATTAACAACGCAG+TGG | + | tig0034889:26386-26405 | Msa1453740:intergenic | 45.0% | |
| CATGTAGACTTCCATGTTGG+CGG | - | tig0034889:26657-26676 | Msa1453740:intron | 45.0% | |
| TCTCAGCTCTTGCATCTCAT+GGG | - | tig0034889:27357-27376 | Msa1453740:CDS | 45.0% | |
| TATGAGGAGGTCAAGAAAGC+TGG | - | tig0034889:27404-27423 | Msa1453740:intron | 45.0% | |
| CAAGAAAGCTGGTCACAACT+TGG | - | tig0034889:27415-27434 | Msa1453740:intron | 45.0% | |
| GAGTGTGGTGACAAGGTATA+AGG | + | tig0034889:27512-27531 | Msa1453740:intergenic | 45.0% | |
| CAGGTTGCTTCTTCTACTCA+TGG | - | tig0034889:27570-27589 | Msa1453740:intron | 45.0% | |
| TTGCTTCAACAGGTCAACAG+TGG | + | tig0034889:27759-27778 | Msa1453740:intergenic | 45.0% | |
| TGACCTGTTGAAGCAACTCA+AGG | - | tig0034889:27763-27782 | Msa1453740:intron | 45.0% | |
| ! | AGTTTGGCCTGGATTTGCTT+TGG | - | tig0034889:28091-28110 | Msa1453740:intron | 45.0% |
| ! | GTTTGGCCTGGATTTGCTTT+GGG | - | tig0034889:28092-28111 | Msa1453740:intron | 45.0% |
| TGATTGCCCAAAGCAAATCC+AGG | + | tig0034889:28101-28120 | Msa1453740:intergenic | 45.0% | |
| ! | GGATTTGCTTTGGGCAATCA+AGG | - | tig0034889:28101-28120 | Msa1453740:intron | 45.0% |
| CTGAAATGGCACAAGCTCTT+AGG | + | tig0034889:28170-28189 | Msa1453740:intergenic | 45.0% | |
| !! | CTAAGAGCTTGTGCCATTTC+AGG | - | tig0034889:28168-28187 | Msa1453740:intron | 45.0% |
| TGGAGAGAATATGAGGTTGC+TGG | - | tig0034889:28216-28235 | Msa1453740:intron | 45.0% | |
| GAGTCCTAAATCTGTAGGAG+AGG | - | tig0034889:28528-28547 | Msa1453740:intron | 45.0% | |
| ATGAGCGACGTTGAGTTTAG+TGG | - | tig0034889:28884-28903 | Msa1453740:intron | 45.0% | |
| !!! | TTAATATTGAAATATTTTAA+AGG | + | tig0034889:21335-21354 | Msa1453740:intergenic | 5.0% |
| !!! | TTATTTTATCAAATAATAAA+TGG | + | tig0034889:22437-22456 | Msa1453740:intergenic | 5.0% |
| !!! | TTTTTTTTTTTAATTATTGT+TGG | - | tig0034889:27250-27269 | Msa1453740:CDS | 5.0% |
| !! | AAAAAAATAAACATAAAATA+GGG | + | tig0034889:28768-28787 | Msa1453740:intergenic | 5.0% |
| AAGGTACAGGGTTCGAACCT+CGG | + | tig0034889:16103-16122 | Msa1453740:intergenic | 50.0% | |
| CTTGTTAACGAGTGCTCCTG+GGG | + | tig0034889:16385-16404 | Msa1453740:intergenic | 50.0% | |
| ! | GTCTTGTTAACGAGTGCTCC+TGG | + | tig0034889:16387-16406 | Msa1453740:intergenic | 50.0% |
| CACAATCTTGTTCCACCTCC+AGG | - | tig0034889:17226-17245 | Msa1453740:CDS | 50.0% | |
| GTGTACCACGATGAGAAGAG+TGG | - | tig0034889:17551-17570 | Msa1453740:intron | 50.0% | |
| CCCGTGAGAGGAAACACAAA+TGG | - | tig0034889:17766-17785 | Msa1453740:intron | 50.0% | |
| ACTCTTTCACGCCAGTGTCT+CGG | + | tig0034889:17893-17912 | Msa1453740:intergenic | 50.0% | |
| GCCACCCATATAGCATGTAG+TGG | - | tig0034889:18448-18467 | Msa1453740:intron | 50.0% | |
| CCCACTACATGCTATATGGG+TGG | + | tig0034889:18452-18471 | Msa1453740:intergenic | 50.0% | |
| GCAGTAGCCTTCCCAATGAT+TGG | + | tig0034889:18857-18876 | Msa1453740:intergenic | 50.0% | |
| ATCATTGGGAAGGCTACTGC+TGG | - | tig0034889:18857-18876 | Msa1453740:intron | 50.0% | |
| GCTACTGCTGGAATCAGAAG+CGG | - | tig0034889:18869-18888 | Msa1453740:intron | 50.0% | |
| ! | GTCAGACCGGCGATGTTTTA+TGG | - | tig0034889:19442-19461 | Msa1453740:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0034889:19808-19827 | Msa1453740:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0034889:19814-19833 | Msa1453740:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0034889:19811-19830 | Msa1453740:intron | 50.0% | |
| CAACAATGAGCCAGACTTGG+TGG | - | tig0034889:20226-20245 | Msa1453740:intron | 50.0% | |
| ! | TAGGCCTTCTGGAGGATAAC+AGG | + | tig0034889:20525-20544 | Msa1453740:intergenic | 50.0% |
| TAGAAGGTTAGGCCTTCTGG+AGG | + | tig0034889:20533-20552 | Msa1453740:intergenic | 50.0% | |
| TTGCCACCCAGTGTCATCAT+GGG | + | tig0034889:20705-20724 | Msa1453740:intergenic | 50.0% | |
| ATTGCCACCCAGTGTCATCA+TGG | + | tig0034889:20706-20725 | Msa1453740:intergenic | 50.0% | |
| AAGAGAGCCCACCACTAGAT+TGG | + | tig0034889:20806-20825 | Msa1453740:intergenic | 50.0% | |
| ! | TGGGATACTCAAGGCATCAG+GGG | + | tig0034889:21142-21161 | Msa1453740:intergenic | 50.0% |
| ! | CTGGGATACTCAAGGCATCA+GGG | + | tig0034889:21143-21162 | Msa1453740:intergenic | 50.0% |
| TGCTTGTGCTGGGATACTCA+AGG | + | tig0034889:21151-21170 | Msa1453740:intergenic | 50.0% | |
| TTGAGTATCCCAGCACAAGC+AGG | - | tig0034889:21150-21169 | Msa1453740:intron | 50.0% | |
| !! | TCTCGAAATAGTGGGCATGC+TGG | - | tig0034889:21542-21561 | Msa1453740:intron | 50.0% |
| !! | CGTGAAGGATGGAAGTGCTT+TGG | + | tig0034889:21838-21857 | Msa1453740:intergenic | 50.0% |
| !! | CTTGACCGATTCGTGAAGGA+TGG | + | tig0034889:21849-21868 | Msa1453740:intergenic | 50.0% |
| !! | ACTGCTTGACCGATTCGTGA+AGG | + | tig0034889:21853-21872 | Msa1453740:intergenic | 50.0% |
| CCCTGTCCACTTGCATTTGA+AGG | - | tig0034889:22616-22635 | Msa1453740:intron | 50.0% | |
| GCCTTCAAATGCAAGTGGAC+AGG | + | tig0034889:22620-22639 | Msa1453740:intergenic | 50.0% | |
| GTGCAGTGCTATGTAAGGTG+GGG | + | tig0034889:22961-22980 | Msa1453740:intergenic | 50.0% | |
| ACACACATACAGGAAGGGGA+GGG | + | tig0034889:23295-23314 | Msa1453740:intergenic | 50.0% | |
| ! | CAGGAGTGTGATAGGGGAAT+TGG | - | tig0034889:23443-23462 | Msa1453740:intron | 50.0% |
| GCCCAAGTCCCACATTGATA+CGG | - | tig0034889:23478-23497 | Msa1453740:intron | 50.0% | |
| GCCGTATCAATGTGGGACTT+GGG | + | tig0034889:23482-23501 | Msa1453740:intergenic | 50.0% | |
| AGCCGTATCAATGTGGGACT+TGG | + | tig0034889:23483-23502 | Msa1453740:intergenic | 50.0% | |
| AGTCCCACATTGATACGGCT+TGG | - | tig0034889:23483-23502 | Msa1453740:intron | 50.0% | |
| GGAACCCTCCCTTAAAAGCA+AGG | + | tig0034889:23516-23535 | Msa1453740:intergenic | 50.0% | |
| !! | GTGATGATGGCGCCTTATGA+TGG | + | tig0034889:23850-23869 | Msa1453740:intergenic | 50.0% |
| TGGCGACATATGCAGGTGTT+TGG | - | tig0034889:23884-23903 | Msa1453740:intron | 50.0% | |
| GCATTGTACATGGCTGTCGT+AGG | + | tig0034889:24102-24121 | Msa1453740:intergenic | 50.0% | |
| GTCTAGACATGCAAGTCAGG+AGG | + | tig0034889:24255-24274 | Msa1453740:intergenic | 50.0% | |
| AAGGAGCAGGGGTAGAAGTT+CGG | + | tig0034889:24705-24724 | Msa1453740:intergenic | 50.0% | |
| AAAACAGCAGTGGTGCCTTG+AGG | - | tig0034889:25270-25289 | Msa1453740:intron | 50.0% | |
| AAACAGCAGTGGTGCCTTGA+GGG | - | tig0034889:25271-25290 | Msa1453740:intron | 50.0% | |
| CATGTGTTTGAGGACCCTCA+AGG | + | tig0034889:25288-25307 | Msa1453740:intergenic | 50.0% | |
| GGTCCTCAAACACATGCAAG+AGG | - | tig0034889:25292-25311 | Msa1453740:intron | 50.0% | |
| TGGCCTCTTGCATGTGTTTG+AGG | + | tig0034889:25298-25317 | Msa1453740:intergenic | 50.0% | |
| !!! | CCCTTCAGCTAGCTTTTGGT+TGG | + | tig0034889:25618-25637 | Msa1453740:intergenic | 50.0% |
| !!! | TCACCCCTTCAGCTAGCTTT+TGG | + | tig0034889:25622-25641 | Msa1453740:intergenic | 50.0% |
| AAATGTTGCTCCCTAGGTGG+GGG | - | tig0034889:25892-25911 | Msa1453740:intron | 50.0% | |
| GGGGTTGCCCAAACATTAGA+AGG | - | tig0034889:25911-25930 | Msa1453740:intron | 50.0% | |
| GGTTGCCTCCCATCAAGAAA+TGG | + | tig0034889:26133-26152 | Msa1453740:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | tig0034889:26169-26188 | Msa1453740:CDS | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | - | tig0034889:26316-26335 | Msa1453740:intron | 50.0% | |
| GCACCTATGAAGCACGGATA+CGG | + | tig0034889:26322-26341 | Msa1453740:intergenic | 50.0% | |
| TTCATAGGTGCCTGCCCAAT+TGG | - | tig0034889:26331-26350 | Msa1453740:intron | 50.0% | |
| ACTGTGAATGGCAGCACTTG+CGG | + | tig0034889:26361-26380 | Msa1453740:intergenic | 50.0% | |
| AACGCAGTGGAGACTGTGAA+TGG | + | tig0034889:26373-26392 | Msa1453740:intergenic | 50.0% | |
| AGCTTGTGGCGAATTCGAGA+AGG | - | tig0034889:26541-26560 | Msa1453740:intron | 50.0% | |
| GTCATAAGTGACCGCCAACA+TGG | + | tig0034889:26671-26690 | Msa1453740:intergenic | 50.0% | |
| TGAACTGTGGATGCAGGGTT+TGG | - | tig0034889:27126-27145 | Msa1453740:CDS | 50.0% | |
| GAGATGCAAGAGCTGAGACA+AGG | + | tig0034889:27355-27374 | Msa1453740:intergenic | 50.0% | |
| GTCTCAGCTCTTGCATCTCA+TGG | - | tig0034889:27356-27375 | Msa1453740:CDS | 50.0% | |
| ATCTCATGGGCGATTGTCTG+AGG | - | tig0034889:27370-27389 | Msa1453740:CDS | 50.0% | |
| GATGCGATGCGTTATCGAAG+TGG | - | tig0034889:27538-27557 | Msa1453740:CDS | 50.0% | |
| GCGTTATCGAAGTGGAGAGT+TGG | - | tig0034889:27546-27565 | Msa1453740:CDS | 50.0% | |
| ATCGAAGTGGAGAGTTGGAC+AGG | - | tig0034889:27551-27570 | Msa1453740:CDS | 50.0% | |
| ! | ACTGGGTTGACGGTTGTTTC+AGG | - | tig0034889:27611-27630 | Msa1453740:intron | 50.0% |
| ! | CTGGGTTGACGGTTGTTTCA+GGG | - | tig0034889:27612-27631 | Msa1453740:intron | 50.0% |
| !! | AGCTTGGCCTTGTTCCTTCA+AGG | - | tig0034889:28127-28146 | Msa1453740:intron | 50.0% |
| GACACTGCCTTGAAGGAACA+AGG | + | tig0034889:28137-28156 | Msa1453740:intergenic | 50.0% | |
| GCGACGTTGAGTTTAGTGGA+AGG | - | tig0034889:28888-28907 | Msa1453740:intron | 50.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | tig0034889:16148-16167 | Msa1453740:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | tig0034889:16145-16164 | Msa1453740:three_prime_UTR | 55.0% | |
| ! | GAAGTGCTTAACCAGTGCCC+CGG | + | tig0034889:16255-16274 | Msa1453740:intergenic | 55.0% |
| GGAATGAATCGTCCCGTGAG+AGG | - | tig0034889:17754-17773 | Msa1453740:intron | 55.0% | |
| ! | CTGGTGGTGAACGATCTGAC+CGG | - | tig0034889:17802-17821 | Msa1453740:intron | 55.0% |
| GTGATTGTTCCAGGCCTTGG+TGG | - | tig0034889:18641-18660 | Msa1453740:intron | 55.0% | |
| ! | GGTGTATTTGCGGACTGTCC+AGG | - | tig0034889:19052-19071 | Msa1453740:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | tig0034889:19800-19819 | Msa1453740:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | tig0034889:19799-19818 | Msa1453740:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | tig0034889:19800-19819 | Msa1453740:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0034889:19806-19825 | Msa1453740:intron | 55.0% | |
| GGAACAGAGGAAACACCTGG+AGG | - | tig0034889:20012-20031 | Msa1453740:intron | 55.0% | |
| AGAGGAAACACCTGGAGGAG+AGG | - | tig0034889:20017-20036 | Msa1453740:intron | 55.0% | |
| AAACACCTGGAGGAGAGGCA+AGG | - | tig0034889:20022-20041 | Msa1453740:intron | 55.0% | |
| CAACCCATGATGACACTGGG+TGG | - | tig0034889:20699-20718 | Msa1453740:intron | 55.0% | |
| ! | CGTACACCCATGAGTGCTGT+TGG | - | tig0034889:20956-20975 | Msa1453740:CDS | 55.0% |
| ! | GCTGGGATACTCAAGGCATC+AGG | + | tig0034889:21144-21163 | Msa1453740:intergenic | 55.0% |
| GGCTTCAACCTGCTTGTGCT+GGG | + | tig0034889:21161-21180 | Msa1453740:intergenic | 55.0% | |
| ! | AGCACAAGCAGGTTGAAGCC+CGG | - | tig0034889:21161-21180 | Msa1453740:intron | 55.0% |
| AGTGGGCATGCTGGAAAGGA+TGG | - | tig0034889:21551-21570 | Msa1453740:intron | 55.0% | |
| !! | AACCTTCCATGGTGCCGACA+TGG | - | tig0034889:21894-21913 | Msa1453740:intron | 55.0% |
| ! | TTGTTCTGTGGGGGCTCTGA+CGG | + | tig0034889:22326-22345 | Msa1453740:intergenic | 55.0% |
| CCAGTCTAGTCAGAGCCCAA+AGG | + | tig0034889:23095-23114 | Msa1453740:intergenic | 55.0% | |
| ! | CCTTTGGGCTCTGACTAGAC+TGG | - | tig0034889:23092-23111 | Msa1453740:intron | 55.0% |
| ACACATACAGGAAGGGGAGG+GGG | + | tig0034889:23293-23312 | Msa1453740:intergenic | 55.0% | |
| CACACATACAGGAAGGGGAG+GGG | + | tig0034889:23294-23313 | Msa1453740:intergenic | 55.0% | |
| CACACACATACAGGAAGGGG+AGG | + | tig0034889:23296-23315 | Msa1453740:intergenic | 55.0% | |
| AGACCACGGCCTGAAATACC+AGG | - | tig0034889:24513-24532 | Msa1453740:intron | 55.0% | |
| GACCACGGCCTGAAATACCA+GGG | - | tig0034889:24514-24533 | Msa1453740:intron | 55.0% | |
| CAGTGCCTGCCTATGAAGCA+CGG | - | tig0034889:26158-26177 | Msa1453740:CDS | 55.0% | |
| AGTGTCCGTGCTTCATAGGC+AGG | + | tig0034889:26166-26185 | Msa1453740:intergenic | 55.0% | |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | + | tig0034889:26170-26189 | Msa1453740:intergenic | 55.0% |
| GATTAGGCGTGTCCCAGTGT+CGG | - | tig0034889:26191-26210 | Msa1453740:CDS | 55.0% | |
| GTCAGTGTCCGTGTTGTGTC+CGG | - | tig0034889:26293-26312 | Msa1453740:intron | 55.0% | |
| TACGGACACCGGACACAACA+CGG | + | tig0034889:26304-26323 | Msa1453740:intergenic | 55.0% | |
| TGAAGCACGGATACGGACAC+CGG | + | tig0034889:26315-26334 | Msa1453740:intergenic | 55.0% | |
| TGAATGGCAGCACTTGCGGT+GGG | + | tig0034889:26357-26376 | Msa1453740:intergenic | 55.0% | |
| CTTCTGAACTAGACGGCGCT+AGG | - | tig0034889:26732-26751 | Msa1453740:intron | 55.0% | |
| TGACAACAGCAGGCACGAAC+AGG | + | tig0034889:27017-27036 | Msa1453740:intergenic | 55.0% | |
| ! | CCTGAGAGAGTGTGGTGACA+AGG | + | tig0034889:27519-27538 | Msa1453740:intergenic | 55.0% |
| CCTTGTCACCACACTCTCTC+AGG | - | tig0034889:27516-27535 | Msa1453740:intron | 55.0% | |
| CATCGCATCCTGAGAGAGTG+TGG | + | tig0034889:27527-27546 | Msa1453740:intergenic | 55.0% | |
| GAGTCCGCACGTTTGCAGTT+TGG | - | tig0034889:28075-28094 | Msa1453740:intron | 55.0% | |
| CAGGCCAAACTGCAAACGTG+CGG | + | tig0034889:28082-28101 | Msa1453740:intergenic | 55.0% | |
| TGGGCAATCAAGGACGAGCT+TGG | - | tig0034889:28111-28130 | Msa1453740:intron | 55.0% | |
| GGGCTTCAACCTGCTTGTGC+TGG | + | tig0034889:21162-21181 | Msa1453740:intergenic | 60.0% | |
| ! | GCACAAGCAGGTTGAAGCCC+GGG | - | tig0034889:21162-21181 | Msa1453740:intron | 60.0% |
| ! | AGCAGGTTGAAGCCCGGGAA+TGG | - | tig0034889:21167-21186 | Msa1453740:intron | 60.0% |
| TCTGCCACCGCAACCTTCCA+TGG | - | tig0034889:21883-21902 | Msa1453740:intron | 60.0% | |
| GTCGGCACCATGGAAGGTTG+CGG | + | tig0034889:21893-21912 | Msa1453740:intergenic | 60.0% | |
| AAGAGGCCATGTCGGCACCA+TGG | + | tig0034889:21903-21922 | Msa1453740:intergenic | 60.0% | |
| ! | TGTTCTGTGGGGGCTCTGAC+GGG | + | tig0034889:22325-22344 | Msa1453740:intergenic | 60.0% |
| ACATACAGGAAGGGGAGGGG+GGG | + | tig0034889:23291-23310 | Msa1453740:intergenic | 60.0% | |
| CACATACAGGAAGGGGAGGG+GGG | + | tig0034889:23292-23311 | Msa1453740:intergenic | 60.0% | |
| AGCCCTGGTATTTCAGGCCG+TGG | + | tig0034889:24519-24538 | Msa1453740:intergenic | 60.0% | |
| GTAAGTGGCCCCACTTAGCG+AGG | - | tig0034889:24743-24762 | Msa1453740:intron | 60.0% | |
| GTTTGGGCAACCCCCACCTA+GGG | + | tig0034889:25905-25924 | Msa1453740:intergenic | 60.0% | |
| TGTTTGGGCAACCCCCACCT+AGG | + | tig0034889:25906-25925 | Msa1453740:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | tig0034889:26175-26194 | Msa1453740:CDS | 60.0% | |
| ACTGGGACACGCCTAATCCG+AGG | + | tig0034889:26189-26208 | Msa1453740:intergenic | 60.0% | |
| CACGACACGTGTCCGACACT+GGG | + | tig0034889:26206-26225 | Msa1453740:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+TGG | + | tig0034889:26207-26226 | Msa1453740:intergenic | 60.0% | |
| GGGCAGGCACCTATGAAGCA+CGG | + | tig0034889:26328-26347 | Msa1453740:intergenic | 60.0% | |
| GCACTTGCGGTGGGCCAATT+GGG | + | tig0034889:26348-26367 | Msa1453740:intergenic | 60.0% | |
| AGCACTTGCGGTGGGCCAAT+TGG | + | tig0034889:26349-26368 | Msa1453740:intergenic | 60.0% | |
| GTGAATGGCAGCACTTGCGG+TGG | + | tig0034889:26358-26377 | Msa1453740:intergenic | 60.0% | |
| CGCACGTTTGCAGTTTGGCC+TGG | - | tig0034889:28080-28099 | Msa1453740:intron | 60.0% | |
| AACTAGTGCCTCCGGGGCAC+TGG | - | tig0034889:16241-16260 | Msa1453740:three_prime_UTR | 65.0% | |
| GTGCTTAACCAGTGCCCCGG+AGG | + | tig0034889:16252-16271 | Msa1453740:intergenic | 65.0% | |
| GGCTACTTGGGCCGAGACAC+TGG | - | tig0034889:17879-17898 | Msa1453740:intron | 65.0% | |
| CACCTGGAGGAGAGGCAAGG+CGG | - | tig0034889:20025-20044 | Msa1453740:intron | 65.0% | |
| TTCCGCCTTGCCTCTCCTCC+AGG | + | tig0034889:20030-20049 | Msa1453740:intergenic | 65.0% | |
| GGCACCATGGAAGGTTGCGG+TGG | + | tig0034889:21890-21909 | Msa1453740:intergenic | 65.0% | |
| GGCCATGTCGGCACCATGGA+AGG | + | tig0034889:21899-21918 | Msa1453740:intergenic | 65.0% | |
| ATACAGGAAGGGGAGGGGGG+GGG | + | tig0034889:23289-23308 | Msa1453740:intergenic | 65.0% | |
| CATACAGGAAGGGGAGGGGG+GGG | + | tig0034889:23290-23309 | Msa1453740:intergenic | 65.0% | |
| GTGGCCCCACTTAGCGAGGA+TGG | - | tig0034889:24747-24766 | Msa1453740:intron | 65.0% | |
| TTGCGGTGGGCCAATTGGGC+AGG | + | tig0034889:26344-26363 | Msa1453740:intergenic | 65.0% | |
| TACAGGAAGGGGAGGGGGGG+GGG | + | tig0034889:23288-23307 | Msa1453740:intergenic | 70.0% | |
| ACAGGAAGGGGAGGGGGGGG+GGG | + | tig0034889:23287-23306 | Msa1453740:intergenic | 75.0% | |
| ! | AGGAAGGGGAGGGGGGGGGG+GGG | + | tig0034889:23285-23304 | Msa1453740:intergenic | 80.0% |
| ! | CAGGAAGGGGAGGGGGGGGG+GGG | + | tig0034889:23286-23305 | Msa1453740:intergenic | 80.0% |
| ! | AAGGGGAGGGGGGGGGGGGG+GGG | + | tig0034889:23282-23301 | Msa1453740:intergenic | 85.0% |
| ! | GAAGGGGAGGGGGGGGGGGG+GGG | + | tig0034889:23283-23302 | Msa1453740:intergenic | 85.0% |
| ! | GGAAGGGGAGGGGGGGGGGG+GGG | + | tig0034889:23284-23303 | Msa1453740:intergenic | 85.0% |
| ! | AGGGGAGGGGGGGGGGGGGG+GGG | + | tig0034889:23281-23300 | Msa1453740:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | tig0034889:23276-23295 | Msa1453740:intergenic | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | + | tig0034889:23277-23296 | Msa1453740:intergenic | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | + | tig0034889:23278-23297 | Msa1453740:intergenic | 95.0% |
| ! | GGGAGGGGGGGGGGGGGGGG+GGG | + | tig0034889:23279-23298 | Msa1453740:intergenic | 95.0% |
| ! | GGGGAGGGGGGGGGGGGGGG+GGG | + | tig0034889:23280-23299 | Msa1453740:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034889 | gene | 16030 | 28999 | 16030 | ID=Msa1453740;Name=Msa1453740 |
| tig0034889 | mRNA | 16030 | 28999 | 16030 | ID=Msa1453740-mRNA-1;Parent=Msa1453740;Name=Msa1453740-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.68|0.76|0.88|1|1|17|378|905 |
| tig0034889 | exon | 16030 | 16678 | 16030 | ID=Msa1453740-mRNA-1:exon:19293;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 16761 | 16978 | 16761 | ID=Msa1453740-mRNA-1:exon:19292;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 17197 | 17275 | 17197 | ID=Msa1453740-mRNA-1:exon:19291;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 17361 | 17491 | 17361 | ID=Msa1453740-mRNA-1:exon:19290;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 17566 | 17730 | 17566 | ID=Msa1453740-mRNA-1:exon:19289;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 18458 | 18562 | 18458 | ID=Msa1453740-mRNA-1:exon:19288;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 19242 | 19343 | 19242 | ID=Msa1453740-mRNA-1:exon:19287;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 19641 | 19760 | 19641 | ID=Msa1453740-mRNA-1:exon:19286;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 20883 | 20981 | 20883 | ID=Msa1453740-mRNA-1:exon:19285;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 21763 | 21876 | 21763 | ID=Msa1453740-mRNA-1:exon:19284;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 22806 | 22913 | 22806 | ID=Msa1453740-mRNA-1:exon:19283;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 24363 | 24427 | 24363 | ID=Msa1453740-mRNA-1:exon:19282;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 26051 | 26287 | 26051 | ID=Msa1453740-mRNA-1:exon:19281;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 26766 | 27389 | 26766 | ID=Msa1453740-mRNA-1:exon:19280;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 27527 | 27580 | 27527 | ID=Msa1453740-mRNA-1:exon:19279;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 27782 | 27965 | 27782 | ID=Msa1453740-mRNA-1:exon:19278;Parent=Msa1453740-mRNA-1 |
| tig0034889 | exon | 28958 | 28999 | 28958 | ID=Msa1453740-mRNA-1:exon:19277;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 28958 | 28999 | 28958 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 27782 | 27965 | 27782 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 27527 | 27580 | 27527 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 26766 | 27389 | 26766 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 26051 | 26287 | 26051 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 24363 | 24427 | 24363 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 22806 | 22913 | 22806 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 21763 | 21876 | 21763 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 20883 | 20981 | 20883 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 19641 | 19760 | 19641 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 19242 | 19343 | 19242 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 18458 | 18562 | 18458 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 17566 | 17730 | 17566 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 17361 | 17491 | 17361 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 17197 | 17275 | 17197 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 16761 | 16978 | 16761 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | CDS | 16408 | 16678 | 16408 | ID=Msa1453740-mRNA-1:cds;Parent=Msa1453740-mRNA-1 |
| tig0034889 | three_prime_UTR | 16030 | 16407 | 16030 | ID=Msa1453740-mRNA-1:three_prime_utr;Parent=Msa1453740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
