AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0225740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0225740 MtrunA17_Chr2g0332091 90.270 370 31 1 1 370 1 365 0.0 684
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0225740 AT1G80420.2 51.872 374 145 10 1 364 1 349 9.09e-117 343
Msa0225740 AT1G80420.3 51.872 374 145 10 1 364 1 349 9.09e-117 343
Msa0225740 AT1G80420.5 51.872 374 145 10 1 364 1 349 9.09e-117 343
Msa0225740 AT1G80420.1 51.872 374 145 10 1 364 1 349 9.09e-117 343
Msa0225740 AT1G80420.4 50.949 369 144 9 1 364 1 337 1.96e-110 327

Find 92 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATGGTCACGGAAATTT+TGG 0.168059 2_1:+75868959 Msa0225740:CDS
TGTCGAAACTTGGGAGTATT+TGG 0.171012 2_1:-75869672 None:intergenic
TGTTGAGGAGCTTGCAAAAT+TGG 0.254184 2_1:+75872823 Msa0225740:CDS
CTTCTTCTTGTTCTTTGTTT+CGG 0.263701 2_1:-75868624 None:intergenic
GGTGAGAAATCCAGTGAAAT+TGG 0.267428 2_1:+75869007 Msa0225740:CDS
TAGTTTGGTTTGCACAATTT+TGG 0.268602 2_1:+75873163 Msa0225740:three_prime_UTR
TTCGGCGCTGTGTTTGATTT+TGG 0.271414 2_1:-75868606 None:intergenic
CTGATTGAACTGGTTTGTTT+AGG 0.274195 2_1:+75873127 Msa0225740:three_prime_UTR
TTTACGAGGAAGAACTAAAT+AGG 0.286647 2_1:+75872918 Msa0225740:CDS
GAACTCTAATTGCACTCTTT+TGG 0.288941 2_1:+75869638 Msa0225740:CDS
TTCTGACTTCAACAAGCTTA+TGG 0.294131 2_1:+75869078 Msa0225740:CDS
TGTATGCAGTGTATTGTCTT+AGG 0.324617 2_1:-75873195 None:intergenic
AGCTTCAACTTGTCGAAACT+TGG 0.336320 2_1:-75869682 None:intergenic
TTGAACTTTGGTCTTCTTGT+TGG 0.338177 2_1:-75869035 None:intergenic
GGGATGAAAAGTAGTTAGTT+TGG 0.339333 2_1:+75873148 Msa0225740:three_prime_UTR
ACAAATGCTGCATCTTCTTC+TGG 0.343819 2_1:+75873004 Msa0225740:CDS
TGATTGAACTGGTTTGTTTA+GGG 0.350215 2_1:+75873128 Msa0225740:three_prime_UTR
TTTGTTATCTCACTTGGATC+TGG 0.354921 2_1:-75871873 None:intergenic
GTGCACAAGTCCGAAAATTC+AGG 0.376157 2_1:-75873359 None:intergenic
ATATCTTCCTTTGACATTGA+AGG 0.399325 2_1:-75872866 None:intergenic
TGCAGTCCAGTGCTAGTTTG+TGG 0.400514 2_1:-75872889 None:intergenic
ATGGAAGTAGTCTCCTTTGA+AGG 0.419702 2_1:-75871348 None:intergenic
GAGGTCGCGTGCTATGGAAA+TGG 0.420876 2_1:+75869593 Msa0225740:CDS
GTTGGAAAGTCAAGAAGAAA+AGG 0.430535 2_1:+75871569 Msa0225740:CDS
TTAAATTTAACCAGGACATT+GGG 0.434931 2_1:+75872765 Msa0225740:intron
CCATGATGGAAGGTTTCTCT+TGG 0.438435 2_1:-75868921 None:intergenic
CAATTTCAACGAGTTTCCTC+TGG 0.440206 2_1:-75870656 None:intergenic
GAATAAAACAATTCAGTGGT+TGG 0.443870 2_1:+75871551 Msa0225740:CDS
CATCTTGAGGTCGCGTGCTA+TGG 0.453790 2_1:+75869587 Msa0225740:CDS
GTTAAATTTAACCAGGACAT+TGG 0.458466 2_1:+75872764 Msa0225740:intron
CGACAAGTTGAAGCTGATTG+TGG 0.469462 2_1:+75869690 Msa0225740:CDS
TCACAGGTGACACATCTTAG+AGG 0.470456 2_1:-75873101 None:intergenic
TCACCACCTTCATCCAAAGT+TGG 0.472003 2_1:-75868989 None:intergenic
GATAGTTACCTTATGCATGC+TGG 0.472246 2_1:+75870678 Msa0225740:CDS
GAAGGCTCAAAGCATTTCCT+AGG 0.473486 2_1:-75871498 None:intergenic
AAAGTTCAAAATGAAAATGC+TGG 0.480138 2_1:+75869049 Msa0225740:CDS
AGGTCGCGTGCTATGGAAAT+GGG 0.481408 2_1:+75869594 Msa0225740:CDS
GTGAGAAATCCAGTGAAATT+GGG 0.485864 2_1:+75869008 Msa0225740:CDS
AACAGACTAATCAACCAAAC+AGG 0.486202 2_1:+75868647 Msa0225740:five_prime_UTR
GTTGGAAGACCCAATTTCAC+TGG 0.493771 2_1:-75869017 None:intergenic
ATGGTTTCCCAGCATGCATA+AGG 0.493889 2_1:-75870686 None:intergenic
CCTGTGAATGCTGATTGAAC+TGG 0.494727 2_1:+75873117 Msa0225740:exon
TTGTGGAACCATTGTATCAA+AGG 0.498296 2_1:+75869707 Msa0225740:CDS
TGTGGTTTGTGGGGTACAGA+TGG 0.499919 2_1:-75871306 None:intergenic
GAAAAGACATTGACGATCCT+AGG 0.500018 2_1:+75871481 Msa0225740:CDS
AAACCACAAAAGCATGTTGA+AGG 0.502946 2_1:+75871321 Msa0225740:CDS
GCCCACTTCTTCACTTCAGA+AGG 0.503953 2_1:-75871516 None:intergenic
ATAGTTACCTTATGCATGCT+GGG 0.506945 2_1:+75870679 Msa0225740:CDS
GACCTCAAGATGCCACGCTC+CGG 0.520624 2_1:-75869576 None:intergenic
AAGACAATACACTGCATACA+AGG 0.522180 2_1:+75873198 Msa0225740:three_prime_UTR
AGATATCCACAAACTAGCAC+TGG 0.527248 2_1:+75872883 Msa0225740:CDS
ATTCTTACCTCGAGTTGTTG+AGG 0.540660 2_1:+75872808 Msa0225740:CDS
ATCCGGAGCGTGGCATCTTG+AGG 0.545472 2_1:+75869574 Msa0225740:CDS
CAAAGATAAATGAAGAACAT+AGG 0.545893 2_1:+75872966 Msa0225740:CDS
GAGCAGAGTATAAGCAGGAC+TGG 0.547595 2_1:+75869616 Msa0225740:CDS
GCTGGGAAACCATGGCGTAA+AGG 0.547805 2_1:+75870696 Msa0225740:CDS
TTGAAGTCATCCATGATGGA+AGG 0.549060 2_1:-75868931 None:intergenic
GCTTCAACTTGTCGAAACTT+GGG 0.550803 2_1:-75869681 None:intergenic
CCAAGAGAAACCTTCCATCA+TGG 0.554767 2_1:+75868921 Msa0225740:CDS
AAGAGACCAACTTTGGATGA+AGG 0.555473 2_1:+75868983 Msa0225740:CDS
AGCCTTCTGAAGTGAAGAAG+TGG 0.556085 2_1:+75871514 Msa0225740:CDS
GATCTACCTCCTTTACGCCA+TGG 0.556671 2_1:-75870705 None:intergenic
CAATAAACCTTCAATGTCAA+AGG 0.558692 2_1:+75872859 Msa0225740:CDS
CTTGCAAAATTGGATGTTGT+GGG 0.560366 2_1:+75872833 Msa0225740:CDS
CAAAGCAGACGTGAGCTGCA+AGG 0.568223 2_1:-75873280 None:intergenic
GCTTGCAAAATTGGATGTTG+TGG 0.569859 2_1:+75872832 Msa0225740:CDS
AGAGGCAAGTCTCATAGACC+TGG 0.570930 2_1:-75873222 None:intergenic
TTGGGAGAGTAACTGAGGAC+TGG 0.572129 2_1:+75872783 Msa0225740:CDS
AGGATAAAGTCTTATATGCA+AGG 0.572773 2_1:-75873081 None:intergenic
TGTTGAAGGAGAGCCTTCAA+AGG 0.574537 2_1:+75871335 Msa0225740:CDS
GACTACTTCCATAAAATCAA+AGG 0.576252 2_1:+75871359 Msa0225740:CDS
ATGACTTCAAAAGAAGATGA+TGG 0.581741 2_1:+75868944 Msa0225740:CDS
CCAGTTCAATCAGCATTCAC+AGG 0.584788 2_1:-75873117 None:intergenic
TGATGATACAATCGAGATGA+CGG 0.585128 2_1:+75873045 Msa0225740:CDS
TAATGAATGAATTGTTGTGA+AGG 0.585755 2_1:-75868579 None:intergenic
TCCGAACCAGGTGTGGAGGG+TGG 0.587826 2_1:-75873440 None:intergenic
ATTTGAATAAAACAATTCAG+TGG 0.592039 2_1:+75871547 Msa0225740:CDS
GCCTTCTGAAGTGAAGAAGT+GGG 0.595508 2_1:+75871515 Msa0225740:CDS
TGCAAGAGTGTTACAGCCAG+AGG 0.601480 2_1:+75870640 Msa0225740:CDS
ATACACTGCATACAAGGCCC+AGG 0.601757 2_1:+75873204 Msa0225740:three_prime_UTR
AGATCACATGAAGTCAATGA+AGG 0.603097 2_1:+75870723 Msa0225740:CDS
AATGGGAGCAGAGTATAAGC+AGG 0.603134 2_1:+75869611 Msa0225740:CDS
GCAAGCTCCTCAACAACTCG+AGG 0.615189 2_1:-75872815 None:intergenic
TTATGCATGCTGGGAAACCA+TGG 0.623179 2_1:+75870688 Msa0225740:CDS
TCAAAAGAAGATGATGGTCA+CGG 0.624811 2_1:+75868950 Msa0225740:CDS
GGGAAACCATGGCGTAAAGG+AGG 0.628797 2_1:+75870699 Msa0225740:CDS
AGATGCCATATGTTCTCTCG+AGG 0.652619 2_1:+75871929 Msa0225740:CDS
AGACCAACTTTGGATGAAGG+TGG 0.656003 2_1:+75868986 Msa0225740:CDS
GAGGCAAGTCTCATAGACCT+GGG 0.665165 2_1:-75873221 None:intergenic
GTGAGCTGCAAGGCTAACAA+AGG 0.669542 2_1:-75873270 None:intergenic
GGACATTGGGAGAGTAACTG+AGG 0.703411 2_1:+75872778 Msa0225740:intron
GGACTGCAAATGTATTTACG+AGG 0.711362 2_1:+75872904 Msa0225740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATAATTTGAGAAAAA+TGG + chr2_1:75871408-75871427 Msa0225740:intron 10.0%
!!! ATTTTTTTAACAAATGAATT+TGG - chr2_1:75871718-75871737 None:intergenic 10.0%
!! ATAAAAAAAAAAAACCTGTT+TGG - chr2_1:75868664-75868683 None:intergenic 15.0%
!! TAATTGATTAAGTTTATGTT+TGG + chr2_1:75869101-75869120 Msa0225740:intron 15.0%
!!! TAGTTTCAATTTTAATTCTA+CGG - chr2_1:75870017-75870036 None:intergenic 15.0%
!!! AAAGAAAAAAATGTTGTTTT+TGG + chr2_1:75870980-75870999 Msa0225740:intron 15.0%
!! CACTTATTTATATATATCTT+TGG - chr2_1:75871145-75871164 None:intergenic 15.0%
!!! AAAAAGTTAATTTTAAACAG+AGG - chr2_1:75873243-75873262 None:intergenic 15.0%
!!! TTTTTTTTGTACTTAACTTT+GGG + chr2_1:75873329-75873348 Msa0225740:three_prime_UTR 15.0%
!! AGGTTATTAATTCATTAAAC+TGG + chr2_1:75869506-75869525 Msa0225740:intron 20.0%
!!! TAATTCATTAAACTGGTTTA+TGG + chr2_1:75869513-75869532 Msa0225740:intron 20.0%
!!! AATATAAGCAGTACTTTTAA+AGG - chr2_1:75869783-75869802 None:intergenic 20.0%
!!! TAAAAGTACTGCTTATATTT+TGG + chr2_1:75869784-75869803 Msa0225740:intron 20.0%
!!! AGTTTCAATTTTAATTCTAC+GGG - chr2_1:75870016-75870035 None:intergenic 20.0%
!!! TATAATCTCATTTTTCTTTG+TGG + chr2_1:75870092-75870111 Msa0225740:intron 20.0%
!!! TGCTGTTTTTTTACTAATAT+TGG + chr2_1:75870442-75870461 Msa0225740:intron 20.0%
!!! TGTTTTTTTACTAATATTGG+TGG + chr2_1:75870445-75870464 Msa0225740:intron 20.0%
!!! GTTTTTGTTGACAAAATATA+TGG - chr2_1:75870574-75870593 None:intergenic 20.0%
!!! TGTATCCTTTATTTTGTTTT+TGG + chr2_1:75870603-75870622 Msa0225740:intron 20.0%
!!! GTATCCTTTATTTTGTTTTT+GGG + chr2_1:75870604-75870623 Msa0225740:intron 20.0%
!! AATGTACAATAACTTAAACT+AGG - chr2_1:75870783-75870802 None:intergenic 20.0%
!!! TCAATATATTTTGCAGATAA+TGG - chr2_1:75871039-75871058 None:intergenic 20.0%
!!! AAAGGTCTTTAAGTAATTTT+AGG - chr2_1:75871083-75871102 None:intergenic 20.0%
!!! AAGTTTTAAACACACAAAAA+AGG - chr2_1:75871101-75871120 None:intergenic 20.0%
!! TAAATAAGTGCAAAATTGTA+AGG + chr2_1:75871155-75871174 Msa0225740:intron 20.0%
!! AAATAAGTGCAAAATTGTAA+GGG + chr2_1:75871156-75871175 Msa0225740:intron 20.0%
!!! AACTTTTACCTTTGATTTTA+TGG - chr2_1:75871370-75871389 None:intergenic 20.0%
!! ATAAAATCAAAGGTAAAAGT+TGG + chr2_1:75871369-75871388 Msa0225740:intron 20.0%
!! ACAATCGACAAATAAAATAA+AGG - chr2_1:75871444-75871463 None:intergenic 20.0%
!! ATTTGAATAAAACAATTCAG+TGG + chr2_1:75871547-75871566 Msa0225740:CDS 20.0%
!!! TTGAGAATTTAGTTTTACAT+AGG - chr2_1:75871840-75871859 None:intergenic 20.0%
!!! ATTTAATCATTTTCTTTTCC+TGG + chr2_1:75872013-75872032 Msa0225740:intron 20.0%
!!! TTTAATCATTTTCTTTTCCT+GGG + chr2_1:75872014-75872033 Msa0225740:intron 20.0%
!!! TATTTTACTTGAATGAGAAT+TGG + chr2_1:75872476-75872495 Msa0225740:intron 20.0%
!!! CTTTTTTTTGTACTTAACTT+TGG + chr2_1:75873328-75873347 Msa0225740:three_prime_UTR 20.0%
! TAATGAATGAATTGTTGTGA+AGG - chr2_1:75868582-75868601 None:intergenic 25.0%
!! AGCATTTTCATTTTGAACTT+TGG - chr2_1:75869050-75869069 None:intergenic 25.0%
! AAAGTTCAAAATGAAAATGC+TGG + chr2_1:75869049-75869068 Msa0225740:CDS 25.0%
! TAAGTTTATGTTTGGTATCA+CGG + chr2_1:75869109-75869128 Msa0225740:intron 25.0%
!! TTGTAGCTTTTACAAAATCA+CGG - chr2_1:75869233-75869252 None:intergenic 25.0%
! CATGTAACAAGTTAAAAGAA+AGG - chr2_1:75869739-75869758 None:intergenic 25.0%
!!! TTTAACTTGTTACATGTGAA+TGG + chr2_1:75869743-75869762 Msa0225740:intron 25.0%
! ATCTATGTCTTATACTTCTT+AGG + chr2_1:75869841-75869860 Msa0225740:intron 25.0%
! GAATAACAAACCATACAATA+GGG - chr2_1:75869870-75869889 None:intergenic 25.0%
! AGAATAACAAACCATACAAT+AGG - chr2_1:75869871-75869890 None:intergenic 25.0%
!!! GTCATTTTATTAATGTCTCA+TGG + chr2_1:75869929-75869948 Msa0225740:intron 25.0%
!! AAATTAGGGATATTTTGTCT+TGG + chr2_1:75870267-75870286 Msa0225740:intron 25.0%
! GTTAGAAAAGAAAAGAACAA+CGG - chr2_1:75870344-75870363 None:intergenic 25.0%
! ACAAAATAAAGGATACATCA+TGG - chr2_1:75870600-75870619 None:intergenic 25.0%
! AACACCCAAAAACAAAATAA+AGG - chr2_1:75870611-75870630 None:intergenic 25.0%
!!! TTATTTTGTTTTTGGGTGTT+AGG + chr2_1:75870611-75870630 Msa0225740:intron 25.0%
! TTGTATGCTTGTAAATTGAT+AGG + chr2_1:75870756-75870775 Msa0225740:intron 25.0%
! TGTTATATACGAAATGATTG+AGG - chr2_1:75870827-75870846 None:intergenic 25.0%
!!! TCTTTTCTCTCTTATTTTTC+TGG + chr2_1:75870938-75870957 Msa0225740:intron 25.0%
!! TATATCTTTGGTGATAAAGA+TGG - chr2_1:75871133-75871152 None:intergenic 25.0%
!! TTCTAACTTCATTTTGTTCA+AGG + chr2_1:75871801-75871820 Msa0225740:intron 25.0%
! AAAACTAAAATCTACATGCA+AGG - chr2_1:75872063-75872082 None:intergenic 25.0%
! GTTGTAAAAATTAAGTGCAA+AGG - chr2_1:75872379-75872398 None:intergenic 25.0%
!! TTGCACTTAATTTTTACAAC+AGG + chr2_1:75872379-75872398 Msa0225740:intron 25.0%
!! ACTTAATTTTTACAACAGGA+TGG + chr2_1:75872383-75872402 Msa0225740:intron 25.0%
! TTCAAGTAAAATATCCAGTA+TGG - chr2_1:75872469-75872488 None:intergenic 25.0%
! TTGTACAGTCCATTTATATT+TGG + chr2_1:75872623-75872642 Msa0225740:intron 25.0%
! TGTGTAAAGCCAAATATAAA+TGG - chr2_1:75872635-75872654 None:intergenic 25.0%
! TTAAAGTAAGAATACCAAGA+TGG - chr2_1:75872673-75872692 None:intergenic 25.0%
!! TCTTACTTTAAGTTTCAATG+TGG + chr2_1:75872682-75872701 Msa0225740:intron 25.0%
!! CTTACTTTAAGTTTCAATGT+GGG + chr2_1:75872683-75872702 Msa0225740:intron 25.0%
!! TTACTTTAAGTTTCAATGTG+GGG + chr2_1:75872684-75872703 Msa0225740:intron 25.0%
! CTGTTATATCAAGGATTAAA+TGG + chr2_1:75872707-75872726 Msa0225740:intron 25.0%
!! TTGTCTTGTTAAATTTAACC+AGG + chr2_1:75872757-75872776 Msa0225740:intron 25.0%
! TTAAATTTAACCAGGACATT+GGG + chr2_1:75872765-75872784 Msa0225740:intron 25.0%
! CAAAGATAAATGAAGAACAT+AGG + chr2_1:75872966-75872985 Msa0225740:CDS 25.0%
! CTTCTTCTTGTTCTTTGTTT+CGG - chr2_1:75868627-75868646 None:intergenic 30.0%
ACTACAAAAACCTGCATTTA+GGG - chr2_1:75868835-75868854 None:intergenic 30.0%
!! ACTTGGGTGTTTTTCAAAAT+TGG + chr2_1:75868858-75868877 Msa0225740:five_prime_UTR 30.0%
ATGACTTCAAAAGAAGATGA+TGG + chr2_1:75868944-75868963 Msa0225740:CDS 30.0%
! CTGTACCTTTTACAAAATCA+CGG - chr2_1:75869288-75869307 None:intergenic 30.0%
GTTTCTTATTAGTGCATGTT+TGG - chr2_1:75869435-75869454 None:intergenic 30.0%
!! GTTTGCATTGTTGTTTAATG+AGG + chr2_1:75869486-75869505 Msa0225740:intron 30.0%
GGAAAAAACCTTTGATACAA+TGG - chr2_1:75869718-75869737 None:intergenic 30.0%
!! GTACTGCTTATATTTTGGAA+AGG + chr2_1:75869789-75869808 Msa0225740:intron 30.0%
!! TATTTTGGAAAGGATAGAAG+TGG + chr2_1:75869799-75869818 Msa0225740:intron 30.0%
GTATAAGACATAGATTCTTG+AGG - chr2_1:75869836-75869855 None:intergenic 30.0%
!! TTTGTTATTCTCACTACTTG+TGG + chr2_1:75869880-75869899 Msa0225740:intron 30.0%
! AGAGATTAGTTGAGACATAA+TGG + chr2_1:75870224-75870243 Msa0225740:intron 30.0%
TTTCCTCAATGAAGGAAATT+AGG + chr2_1:75870252-75870271 Msa0225740:intron 30.0%
TTCCTCAATGAAGGAAATTA+GGG + chr2_1:75870253-75870272 Msa0225740:intron 30.0%
! AGACATTAAGTTTTTGCTTG+AGG + chr2_1:75870299-75870318 Msa0225740:intron 30.0%
! TTAAGTTTTTGCTTGAGGAA+AGG + chr2_1:75870304-75870323 Msa0225740:intron 30.0%
GTCTGGATTATGTAACAAAT+AGG - chr2_1:75870420-75870439 None:intergenic 30.0%
!!! GCTTACCACTTTTTAGATTT+TGG + chr2_1:75870502-75870521 Msa0225740:intron 30.0%
!!! TACCACTTTTTAGATTTTGG+TGG + chr2_1:75870505-75870524 Msa0225740:intron 30.0%
!!! ACCACTTTTTAGATTTTGGT+GGG + chr2_1:75870506-75870525 Msa0225740:intron 30.0%
!!! TAGTAACGTTACACTGATTT+TGG + chr2_1:75870536-75870555 Msa0225740:intron 30.0%
GGAAATATTAGATGTGAAAC+TGG - chr2_1:75871253-75871272 None:intergenic 30.0%
GACTACTTCCATAAAATCAA+AGG + chr2_1:75871359-75871378 Msa0225740:CDS 30.0%
! ATTGTTTGCTACATATTCCA+GGG + chr2_1:75871459-75871478 Msa0225740:intron 30.0%
GAATAAAACAATTCAGTGGT+TGG + chr2_1:75871551-75871570 Msa0225740:CDS 30.0%
! AATGTTTCTGTTCATTCTAG+AGG + chr2_1:75871619-75871638 Msa0225740:intron 30.0%
!! TGCTTCTAAAGCATTTATCA+CGG - chr2_1:75871767-75871786 None:intergenic 30.0%
!! TGATAAATGCTTTAGAAGCA+AGG + chr2_1:75871767-75871786 Msa0225740:intron 30.0%
!!! GCTATTTTTGTTATCTCACT+TGG - chr2_1:75871882-75871901 None:intergenic 30.0%
ATAACAAAAATAGCTGCAGA+AGG + chr2_1:75871888-75871907 Msa0225740:CDS 30.0%
TAACAAAAATAGCTGCAGAA+GGG + chr2_1:75871889-75871908 Msa0225740:CDS 30.0%
! AAACTGATTGTGACTTGTAT+TGG + chr2_1:75871976-75871995 Msa0225740:intron 30.0%
ATCAGACTAATAATAGATGC+AGG + chr2_1:75872119-75872138 Msa0225740:intron 30.0%
TCAGACTAATAATAGATGCA+GGG + chr2_1:75872120-75872139 Msa0225740:intron 30.0%
AATACATTCCCAAGAAAGAT+AGG - chr2_1:75872207-75872226 None:intergenic 30.0%
! TTCTGGAGAAAACTATGTTA+GGG - chr2_1:75872356-75872375 None:intergenic 30.0%
AAAATTAAGTGCAAAGGTTC+TGG - chr2_1:75872373-75872392 None:intergenic 30.0%
TATAATTAGTCGGCATCATT+AGG - chr2_1:75872430-75872449 None:intergenic 30.0%
! AATGATGCCGACTAATTATA+AGG + chr2_1:75872430-75872449 Msa0225740:intron 30.0%
ATGAGAATTGGCAAATCATT+TGG + chr2_1:75872488-75872507 Msa0225740:intron 30.0%
GACATTGAAGGATATCTTAA+TGG - chr2_1:75872544-75872563 None:intergenic 30.0%
GTTAAATTTAACCAGGACAT+TGG + chr2_1:75872764-75872783 Msa0225740:intron 30.0%
CAATAAACCTTCAATGTCAA+AGG + chr2_1:75872859-75872878 Msa0225740:CDS 30.0%
ATATCTTCCTTTGACATTGA+AGG - chr2_1:75872869-75872888 None:intergenic 30.0%
TTTACGAGGAAGAACTAAAT+AGG + chr2_1:75872918-75872937 Msa0225740:CDS 30.0%
! AGGATAAAGTCTTATATGCA+AGG - chr2_1:75873084-75873103 None:intergenic 30.0%
!! TGATTGAACTGGTTTGTTTA+GGG + chr2_1:75873128-75873147 Msa0225740:three_prime_UTR 30.0%
!!! TAGTTTGGTTTGCACAATTT+TGG + chr2_1:75873163-75873182 Msa0225740:three_prime_UTR 30.0%
! TTTTTGTACTTAACTTTGGG+AGG + chr2_1:75873332-75873351 Msa0225740:three_prime_UTR 30.0%
AACAGACTAATCAACCAAAC+AGG + chr2_1:75868647-75868666 Msa0225740:five_prime_UTR 35.0%
TTTGAATGAACCCTAAATGC+AGG + chr2_1:75868822-75868841 Msa0225740:intron 35.0%
CACTACAAAAACCTGCATTT+AGG - chr2_1:75868836-75868855 None:intergenic 35.0%
! CTAAATGCAGGTTTTTGTAG+TGG + chr2_1:75868834-75868853 Msa0225740:intron 35.0%
!! AGGTTTTTGTAGTGGAACTT+GGG + chr2_1:75868842-75868861 Msa0225740:intron 35.0%
!!! TCTTTTGAAGTCATCCATGA+TGG - chr2_1:75868938-75868957 None:intergenic 35.0%
! TCAAAAGAAGATGATGGTCA+CGG + chr2_1:75868950-75868969 Msa0225740:CDS 35.0%
!! TTTTGGAAAGAGACCAACTT+TGG + chr2_1:75868976-75868995 Msa0225740:CDS 35.0%
GTGAGAAATCCAGTGAAATT+GGG + chr2_1:75869008-75869027 Msa0225740:CDS 35.0%
! TTGAACTTTGGTCTTCTTGT+TGG - chr2_1:75869038-75869057 None:intergenic 35.0%
TTCTGACTTCAACAAGCTTA+TGG + chr2_1:75869078-75869097 Msa0225740:CDS 35.0%
AAGCAGCTTTCGAAAAATCA+CGG - chr2_1:75869162-75869181 None:intergenic 35.0%
! TAGCTTTTACAAAATCACGG+TGG - chr2_1:75869230-75869249 None:intergenic 35.0%
TAAAAGCTACAATGCCAAAG+TGG + chr2_1:75869241-75869260 Msa0225740:intron 35.0%
! TGTCACCGTGATTTTGTAAA+AGG + chr2_1:75869280-75869299 Msa0225740:intron 35.0%
! ACGGAGCTTTTGTAAAATCA+GGG + chr2_1:75869374-75869393 Msa0225740:intron 35.0%
! AAGTAGCAGTTGTGTGTTTT+TGG + chr2_1:75869459-75869478 Msa0225740:intron 35.0%
! AGTAGCAGTTGTGTGTTTTT+GGG + chr2_1:75869460-75869479 Msa0225740:intron 35.0%
! CATTAAACTGGTTTATGGAC+AGG + chr2_1:75869518-75869537 Msa0225740:intron 35.0%
! GAACTCTAATTGCACTCTTT+TGG + chr2_1:75869638-75869657 Msa0225740:CDS 35.0%
TTGTGGAACCATTGTATCAA+AGG + chr2_1:75869707-75869726 Msa0225740:CDS 35.0%
TCTTAGGAATCCCTATTGTA+TGG + chr2_1:75869857-75869876 Msa0225740:intron 35.0%
! TATTAGCTGGTTCAAGTTTG+AGG - chr2_1:75870044-75870063 None:intergenic 35.0%
!! TAATAGCCAAGAAGGTACTA+GGG + chr2_1:75870059-75870078 Msa0225740:intron 35.0%
! TGGTTTTCTTTCCTCAATGA+AGG + chr2_1:75870244-75870263 Msa0225740:intron 35.0%
ATCCCTAATTTCCTTCATTG+AGG - chr2_1:75870258-75870277 None:intergenic 35.0%
AGTAAAAAAACAGCATCGTC+TGG - chr2_1:75870437-75870456 None:intergenic 35.0%
TCCCACCAAAATCTAAAAAG+TGG - chr2_1:75870510-75870529 None:intergenic 35.0%
!!! TTGTTTTTGGGTGTTAGGAT+TGG + chr2_1:75870616-75870635 Msa0225740:intron 35.0%
ATAGTTACCTTATGCATGCT+GGG + chr2_1:75870679-75870698 Msa0225740:CDS 35.0%
AGATCACATGAAGTCAATGA+AGG + chr2_1:75870723-75870742 Msa0225740:CDS 35.0%
AGAAGCCAATTAAGATTGCA+TGG + chr2_1:75870864-75870883 Msa0225740:intron 35.0%
! ATCTAAGATGCAAGTCACAA+AGG - chr2_1:75870899-75870918 None:intergenic 35.0%
ACTCACGCATAAATTTCATG+AGG - chr2_1:75871274-75871293 None:intergenic 35.0%
!! AACATGCTTTTGTGGTTTGT+GGG - chr2_1:75871319-75871338 None:intergenic 35.0%
! AAACCACAAAAGCATGTTGA+AGG + chr2_1:75871321-75871340 Msa0225740:CDS 35.0%
! GATTGTTTGCTACATATTCC+AGG + chr2_1:75871458-75871477 Msa0225740:intron 35.0%
GTTGGAAAGTCAAGAAGAAA+AGG + chr2_1:75871569-75871588 Msa0225740:CDS 35.0%
TAAGCTTTCAGAACTTGCAT+AGG + chr2_1:75871655-75871674 Msa0225740:intron 35.0%
! TTTGTTATCTCACTTGGATC+TGG - chr2_1:75871876-75871895 None:intergenic 35.0%
! TTTTTCCTCGAGAGAACATA+TGG - chr2_1:75871937-75871956 None:intergenic 35.0%
AGCAATTTGCCTATCTTTCT+TGG + chr2_1:75872195-75872214 Msa0225740:intron 35.0%
GCAATTTGCCTATCTTTCTT+GGG + chr2_1:75872196-75872215 Msa0225740:intron 35.0%
ATCCAAGTAGTAAGCAATAC+TGG - chr2_1:75872293-75872312 None:intergenic 35.0%
TGTTAGGGACAAAAAAAGCT+AGG - chr2_1:75872341-75872360 None:intergenic 35.0%
!! GTTCTGGAGAAAACTATGTT+AGG - chr2_1:75872357-75872376 None:intergenic 35.0%
! ACTCAGGCCTTATAATTAGT+CGG - chr2_1:75872440-75872459 None:intergenic 35.0%
CTTGCAAAATTGGATGTTGT+GGG + chr2_1:75872833-75872852 Msa0225740:CDS 35.0%
GAAGAACATAGGAGCAAAAA+TGG + chr2_1:75872977-75872996 Msa0225740:CDS 35.0%
TGATGATACAATCGAGATGA+CGG + chr2_1:75873045-75873064 Msa0225740:CDS 35.0%
!! CTGATTGAACTGGTTTGTTT+AGG + chr2_1:75873127-75873146 Msa0225740:three_prime_UTR 35.0%
GGGATGAAAAGTAGTTAGTT+TGG + chr2_1:75873148-75873167 Msa0225740:three_prime_UTR 35.0%
TGTATGCAGTGTATTGTCTT+AGG - chr2_1:75873198-75873217 None:intergenic 35.0%
AAGACAATACACTGCATACA+AGG + chr2_1:75873198-75873217 Msa0225740:three_prime_UTR 35.0%
! GCGAGTACTAATTTTATCCA+CGG + chr2_1:75873302-75873321 Msa0225740:three_prime_UTR 35.0%
AGTACAAAAAAAAGAGTCCG+TGG - chr2_1:75873322-75873341 None:intergenic 35.0%
!! CAGGTTTTTGTAGTGGAACT+TGG + chr2_1:75868841-75868860 Msa0225740:intron 40.0%
! TTGAAGTCATCCATGATGGA+AGG - chr2_1:75868934-75868953 None:intergenic 40.0%
!! GATGATGGTCACGGAAATTT+TGG + chr2_1:75868959-75868978 Msa0225740:CDS 40.0%
AAGAGACCAACTTTGGATGA+AGG + chr2_1:75868983-75869002 Msa0225740:CDS 40.0%
GGTGAGAAATCCAGTGAAAT+TGG + chr2_1:75869007-75869026 Msa0225740:CDS 40.0%
TTAGTGCGTGTTTGGTATCA+TGG + chr2_1:75869180-75869199 Msa0225740:intron 40.0%
AAAGTGGCTATGCGAAATCA+CGG + chr2_1:75869257-75869276 Msa0225740:intron 40.0%
TTTACAAAAGCTCCGTGCAT+TGG - chr2_1:75869370-75869389 None:intergenic 40.0%
! CACGGAGCTTTTGTAAAATC+AGG + chr2_1:75869373-75869392 Msa0225740:intron 40.0%
! GAGCTTTTGTAAAATCAGGG+TGG + chr2_1:75869377-75869396 Msa0225740:intron 40.0%
! AAACTGGTTTATGGACAGGA+AGG + chr2_1:75869522-75869541 Msa0225740:intron 40.0%
! AGGTGTAGTTTTTGTGCTGT+CGG + chr2_1:75869542-75869561 Msa0225740:CDS 40.0%
!! TGTCGAAACTTGGGAGTATT+TGG - chr2_1:75869675-75869694 None:intergenic 40.0%
GCTTCAACTTGTCGAAACTT+GGG - chr2_1:75869684-75869703 None:intergenic 40.0%
AGCTTCAACTTGTCGAAACT+TGG - chr2_1:75869685-75869704 None:intergenic 40.0%
TTGGAAAGGATAGAAGTGGA+AGG + chr2_1:75869803-75869822 Msa0225740:intron 40.0%
!! CTAATAGCCAAGAAGGTACT+AGG + chr2_1:75870058-75870077 Msa0225740:intron 40.0%
! TAGCGTCAATTACTGACTGT+AGG + chr2_1:75870166-75870185 Msa0225740:intron 40.0%
! TGCTGTAGTGTCTTAGTTTG+CGG + chr2_1:75870193-75870212 Msa0225740:intron 40.0%
TAATCCAAGCCTTTCACTGA+GGG + chr2_1:75870390-75870409 Msa0225740:intron 40.0%
CAATTTCAACGAGTTTCCTC+TGG - chr2_1:75870659-75870678 None:intergenic 40.0%
GATAGTTACCTTATGCATGC+TGG + chr2_1:75870678-75870697 Msa0225740:CDS 40.0%
CAGCTCCATGCAATCTTAAT+TGG - chr2_1:75870872-75870891 None:intergenic 40.0%
!!! TGTTTTTGGAGCAGAATCAC+TGG + chr2_1:75870994-75871013 Msa0225740:intron 40.0%
!! ACATGCTTTTGTGGTTTGTG+GGG - chr2_1:75871318-75871337 None:intergenic 40.0%
! CAACATGCTTTTGTGGTTTG+TGG - chr2_1:75871320-75871339 None:intergenic 40.0%
! TCTCCTTCAACATGCTTTTG+TGG - chr2_1:75871327-75871346 None:intergenic 40.0%
ATGGAAGTAGTCTCCTTTGA+AGG - chr2_1:75871351-75871370 None:intergenic 40.0%
GAAAAGACATTGACGATCCT+AGG + chr2_1:75871481-75871500 Msa0225740:CDS 40.0%
ATGTTCTCTCGAGGAAAAAC+AGG + chr2_1:75871938-75871957 Msa0225740:CDS 40.0%
! TCATTTTCTTTTCCTGGGAG+TGG + chr2_1:75872019-75872038 Msa0225740:intron 40.0%
TTACTTATATTGCCACTCCC+AGG - chr2_1:75872034-75872053 None:intergenic 40.0%
CACCAGTATTGCTTACTACT+TGG + chr2_1:75872288-75872307 Msa0225740:intron 40.0%
AAGCTAGGATGGCAATGATT+AGG - chr2_1:75872326-75872345 None:intergenic 40.0%
AGGGACAAAAAAAGCTAGGA+TGG - chr2_1:75872337-75872356 None:intergenic 40.0%
TCCAGTATGGCTATATACTC+AGG - chr2_1:75872456-75872475 None:intergenic 40.0%
TGTCATTCAGTGTGATGACT+CGG - chr2_1:75872514-75872533 None:intergenic 40.0%
CCAATTGTCAACGACATTGA+AGG - chr2_1:75872556-75872575 None:intergenic 40.0%
CCTTCAATGTCGTTGACAAT+TGG + chr2_1:75872553-75872572 Msa0225740:intron 40.0%
GTAAGAATACCAAGATGGCA+CGG - chr2_1:75872668-75872687 None:intergenic 40.0%
AATGTGGGGCTGTTATATCA+AGG + chr2_1:75872698-75872717 Msa0225740:intron 40.0%
! ATTCTTACCTCGAGTTGTTG+AGG + chr2_1:75872808-75872827 Msa0225740:CDS 40.0%
TGTTGAGGAGCTTGCAAAAT+TGG + chr2_1:75872823-75872842 Msa0225740:CDS 40.0%
GCTTGCAAAATTGGATGTTG+TGG + chr2_1:75872832-75872851 Msa0225740:CDS 40.0%
AGATATCCACAAACTAGCAC+TGG + chr2_1:75872883-75872902 Msa0225740:CDS 40.0%
GGACTGCAAATGTATTTACG+AGG + chr2_1:75872904-75872923 Msa0225740:CDS 40.0%
ACAAATGCTGCATCTTCTTC+TGG + chr2_1:75873004-75873023 Msa0225740:CDS 40.0%
!! TTCGGCGCTGTGTTTGATTT+TGG - chr2_1:75868609-75868628 None:intergenic 45.0%
! CCATGATGGAAGGTTTCTCT+TGG - chr2_1:75868924-75868943 None:intergenic 45.0%
CCAAGAGAAACCTTCCATCA+TGG + chr2_1:75868921-75868940 Msa0225740:CDS 45.0%
AGACCAACTTTGGATGAAGG+TGG + chr2_1:75868986-75869005 Msa0225740:CDS 45.0%
TCACCACCTTCATCCAAAGT+TGG - chr2_1:75868992-75869011 None:intergenic 45.0%
GTTGGAAGACCCAATTTCAC+TGG - chr2_1:75869020-75869039 None:intergenic 45.0%
ACGGTGGCTCAATGTGATTA+TGG - chr2_1:75869143-75869162 None:intergenic 45.0%
CAGCTTTCGAAAAATCACGG+TGG - chr2_1:75869159-75869178 None:intergenic 45.0%
AAAGCTGCTTAGTGCGTGTT+TGG + chr2_1:75869172-75869191 Msa0225740:intron 45.0%
GTGATTTCGCATAGCCACTT+TGG - chr2_1:75869258-75869277 None:intergenic 45.0%
TGTAAAATCAGGGTGGTTCG+CGG + chr2_1:75869384-75869403 Msa0225740:intron 45.0%
! GGTGTAGTTTTTGTGCTGTC+GGG + chr2_1:75869543-75869562 Msa0225740:CDS 45.0%
AATGGGAGCAGAGTATAAGC+AGG + chr2_1:75869611-75869630 Msa0225740:CDS 45.0%
! CGACAAGTTGAAGCTGATTG+TGG + chr2_1:75869690-75869709 Msa0225740:CDS 45.0%
TATTCTCACTACTTGTGGCG+TGG + chr2_1:75869885-75869904 Msa0225740:intron 45.0%
ATTCTCACTACTTGTGGCGT+GGG + chr2_1:75869886-75869905 Msa0225740:intron 45.0%
GAACCAGCTAATAGCCAAGA+AGG + chr2_1:75870051-75870070 Msa0225740:intron 45.0%
GTACCTTCTTGGCTATTAGC+TGG - chr2_1:75870057-75870076 None:intergenic 45.0%
!! TGTAGTGTCTTAGTTTGCGG+TGG + chr2_1:75870196-75870215 Msa0225740:intron 45.0%
CTAATCCAAGCCTTTCACTG+AGG + chr2_1:75870389-75870408 Msa0225740:intron 45.0%
AATCCAAGCCTTTCACTGAG+GGG + chr2_1:75870391-75870410 Msa0225740:intron 45.0%
ATAGGATTCCCCTCAGTGAA+AGG - chr2_1:75870402-75870421 None:intergenic 45.0%
ATGGTTTCCCAGCATGCATA+AGG - chr2_1:75870689-75870708 None:intergenic 45.0%
TTATGCATGCTGGGAAACCA+TGG + chr2_1:75870688-75870707 Msa0225740:CDS 45.0%
TGTTGAAGGAGAGCCTTCAA+AGG + chr2_1:75871335-75871354 Msa0225740:CDS 45.0%
! GATCGTCAATGTCTTTTCCC+TGG - chr2_1:75871479-75871498 None:intergenic 45.0%
! GAAGGCTCAAAGCATTTCCT+AGG - chr2_1:75871501-75871520 None:intergenic 45.0%
!! AGCCTTCTGAAGTGAAGAAG+TGG + chr2_1:75871514-75871533 Msa0225740:CDS 45.0%
!! GCCTTCTGAAGTGAAGAAGT+GGG + chr2_1:75871515-75871534 Msa0225740:CDS 45.0%
AGATGCCATATGTTCTCTCG+AGG + chr2_1:75871929-75871948 Msa0225740:CDS 45.0%
GCCTGAGTATATAGCCATAC+TGG + chr2_1:75872452-75872471 Msa0225740:intron 45.0%
TCACAGGTGACACATCTTAG+AGG - chr2_1:75873104-75873123 None:intergenic 45.0%
CCAGTTCAATCAGCATTCAC+AGG - chr2_1:75873120-75873139 None:intergenic 45.0%
! CCTGTGAATGCTGATTGAAC+TGG + chr2_1:75873117-75873136 Msa0225740:exon 45.0%
!!! GGGAGGAGTACCTGAATTTT+CGG + chr2_1:75873349-75873368 Msa0225740:three_prime_UTR 45.0%
GTGCACAAGTCCGAAAATTC+AGG - chr2_1:75873362-75873381 None:intergenic 45.0%
!!! ATTTTTCAAATATTATTTAT+TGG + chr2_1:75870473-75870492 Msa0225740:intron 5.0%
! CCGTGCATTGGTATCATGGT+GGG - chr2_1:75869358-75869377 None:intergenic 50.0%
CCCACCATGATACCAATGCA+CGG + chr2_1:75869355-75869374 Msa0225740:intron 50.0%
! TCCGTGCATTGGTATCATGG+TGG - chr2_1:75869359-75869378 None:intergenic 50.0%
! AGCTCCGTGCATTGGTATCA+TGG - chr2_1:75869362-75869381 None:intergenic 50.0%
!! GCTGTCGGGTTTTGTGAATC+CGG + chr2_1:75869557-75869576 Msa0225740:CDS 50.0%
AGGTCGCGTGCTATGGAAAT+GGG + chr2_1:75869594-75869613 Msa0225740:CDS 50.0%
GAGCAGAGTATAAGCAGGAC+TGG + chr2_1:75869616-75869635 Msa0225740:CDS 50.0%
GAGATGCCCTAGTACCTTCT+TGG - chr2_1:75870068-75870087 None:intergenic 50.0%
ATTCCCCTCAGTGAAAGGCT+TGG - chr2_1:75870397-75870416 None:intergenic 50.0%
!! TGCAAGAGTGTTACAGCCAG+AGG + chr2_1:75870640-75870659 Msa0225740:CDS 50.0%
GATCTACCTCCTTTACGCCA+TGG - chr2_1:75870708-75870727 None:intergenic 50.0%
GAGGTTGGCAAACATGCATG+TGG - chr2_1:75871201-75871220 None:intergenic 50.0%
GTGAAACTGGACCGAGACAA+CGG - chr2_1:75871240-75871259 None:intergenic 50.0%
! TGTGGTTTGTGGGGTACAGA+TGG - chr2_1:75871309-75871328 None:intergenic 50.0%
GCCCACTTCTTCACTTCAGA+AGG - chr2_1:75871519-75871538 None:intergenic 50.0%
CTCACTTGGATCTGGCTGAA+AGG - chr2_1:75871868-75871887 None:intergenic 50.0%
GTCTGAATTCCGTGCCATCT+TGG + chr2_1:75872656-75872675 Msa0225740:intron 50.0%
CAGTTACTCTCCCAATGTCC+TGG - chr2_1:75872778-75872797 None:intergenic 50.0%
GGACATTGGGAGAGTAACTG+AGG + chr2_1:75872778-75872797 Msa0225740:intron 50.0%
TTGGGAGAGTAACTGAGGAC+TGG + chr2_1:75872783-75872802 Msa0225740:CDS 50.0%
! TGCAGTCCAGTGCTAGTTTG+TGG - chr2_1:75872892-75872911 None:intergenic 50.0%
ATACACTGCATACAAGGCCC+AGG + chr2_1:75873204-75873223 Msa0225740:three_prime_UTR 50.0%
GAGGCAAGTCTCATAGACCT+GGG - chr2_1:75873224-75873243 None:intergenic 50.0%
AGAGGCAAGTCTCATAGACC+TGG - chr2_1:75873225-75873244 None:intergenic 50.0%
GTGAGCTGCAAGGCTAACAA+AGG - chr2_1:75873273-75873292 None:intergenic 50.0%
AGGGTGGTTCGCGGTGATTT+GGG + chr2_1:75869393-75869412 Msa0225740:intron 55.0%
!! GGTTTTGTGAATCCGGAGCG+TGG + chr2_1:75869564-75869583 Msa0225740:CDS 55.0%
CATCTTGAGGTCGCGTGCTA+TGG + chr2_1:75869587-75869606 Msa0225740:CDS 55.0%
GAGGTCGCGTGCTATGGAAA+TGG + chr2_1:75869593-75869612 Msa0225740:CDS 55.0%
GCTGGGAAACCATGGCGTAA+AGG + chr2_1:75870696-75870715 Msa0225740:CDS 55.0%
GGGAAACCATGGCGTAAAGG+AGG + chr2_1:75870699-75870718 Msa0225740:CDS 55.0%
GAGACAACGGTGTGGGACTT+GGG - chr2_1:75871227-75871246 None:intergenic 55.0%
CAAGTCCCACACCGTTGTCT+CGG + chr2_1:75871226-75871245 Msa0225740:intron 55.0%
GCAAGCTCCTCAACAACTCG+AGG - chr2_1:75872818-75872837 None:intergenic 55.0%
CAAAGCAGACGTGAGCTGCA+AGG - chr2_1:75873283-75873302 None:intergenic 55.0%
CAGGGTGGTTCGCGGTGATT+TGG + chr2_1:75869392-75869411 Msa0225740:intron 60.0%
ATCCGGAGCGTGGCATCTTG+AGG + chr2_1:75869574-75869593 Msa0225740:CDS 60.0%
GACCTCAAGATGCCACGCTC+CGG - chr2_1:75869579-75869598 None:intergenic 60.0%
GTGGGACTTGGGTAGGAGGT+TGG - chr2_1:75871216-75871235 None:intergenic 60.0%
CAACGGTGTGGGACTTGGGT+AGG - chr2_1:75871223-75871242 None:intergenic 60.0%
CGAGACAACGGTGTGGGACT+TGG - chr2_1:75871228-75871247 None:intergenic 60.0%
CTGGACCGAGACAACGGTGT+GGG - chr2_1:75871234-75871253 None:intergenic 60.0%
ACTGGACCGAGACAACGGTG+TGG - chr2_1:75871235-75871254 None:intergenic 60.0%
CGGTGTGGGACTTGGGTAGG+AGG - chr2_1:75871220-75871239 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 75868574 75873447 75868574 ID=Msa0225740;Name=Msa0225740
chr2_1 mRNA 75868574 75873447 75868574 ID=Msa0225740-mRNA-1;Parent=Msa0225740;Name=Msa0225740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=165|1|1|1|0.85|0.75|8|324|370
chr2_1 exon 75868574 75868668 75868574 ID=Msa0225740-mRNA-1:exon:22840;Parent=Msa0225740-mRNA-1
chr2_1 exon 75868844 75869099 75868844 ID=Msa0225740-mRNA-1:exon:22841;Parent=Msa0225740-mRNA-1
chr2_1 exon 75869540 75869728 75869540 ID=Msa0225740-mRNA-1:exon:22842;Parent=Msa0225740-mRNA-1
chr2_1 exon 75870633 75870744 75870633 ID=Msa0225740-mRNA-1:exon:22843;Parent=Msa0225740-mRNA-1
chr2_1 exon 75871298 75871380 75871298 ID=Msa0225740-mRNA-1:exon:22844;Parent=Msa0225740-mRNA-1
chr2_1 exon 75871480 75871590 75871480 ID=Msa0225740-mRNA-1:exon:22845;Parent=Msa0225740-mRNA-1
chr2_1 exon 75871873 75871959 75871873 ID=Msa0225740-mRNA-1:exon:22846;Parent=Msa0225740-mRNA-1
chr2_1 exon 75872779 75873447 75872779 ID=Msa0225740-mRNA-1:exon:22847;Parent=Msa0225740-mRNA-1
chr2_1 five_prime_UTR 75868574 75868668 75868574 ID=Msa0225740-mRNA-1:five_prime_utr;Parent=Msa0225740-mRNA-1
chr2_1 five_prime_UTR 75868844 75868913 75868844 ID=Msa0225740-mRNA-1:five_prime_utr;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75868914 75869099 75868914 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75869540 75869728 75869540 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75870633 75870744 75870633 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75871298 75871380 75871298 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75871480 75871590 75871480 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75871873 75871959 75871873 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 CDS 75872779 75873123 75872779 ID=Msa0225740-mRNA-1:cds;Parent=Msa0225740-mRNA-1
chr2_1 three_prime_UTR 75873124 75873447 75873124 ID=Msa0225740-mRNA-1:three_prime_utr;Parent=Msa0225740-mRNA-1
Gene Sequence

>Msa0225740

ATGTCTTCCAAGAGAAACCTTCCATCATGGATGACTTCAAAAGAAGATGATGGTCACGGAAATTTTGGAAAGAGACCAACTTTGGATGAAGGTGGTGAGAAATCCAGTGAAATTGGGTCTTCCAACAAGAAGACCAAAGTTCAAAATGAAAATGCTGGAAAATCTTCTGACTTCAACAAGCTTATGGAAGGTGTAGTTTTTGTGCTGTCGGGTTTTGTGAATCCGGAGCGTGGCATCTTGAGGTCGCGTGCTATGGAAATGGGAGCAGAGTATAAGCAGGACTGGAACTCTAATTGCACTCTTTTGGTTTGTGCATTTCCAAATACTCCCAAGTTTCGACAAGTTGAAGCTGATTGTGGAACCATTGTATCAAAGGATTGGATGCAAGAGTGTTACAGCCAGAGGAAACTCGTTGAAATTGATAGTTACCTTATGCATGCTGGGAAACCATGGCGTAAAGGAGGTAGATCACATGAAGTCAATGAAGAACAAAAACCATCTGTACCCCACAAACCACAAAAGCATGTTGAAGGAGAGCCTTCAAAGGAGACTACTTCCATAAAATCAAAGGGAAAAGACATTGACGATCCTAGGAAATGCTTTGAGCCTTCTGAAGTGAAGAAGTGGGCTCTTGATGATTTGAATAAAACAATTCAGTGGTTGGAAAGTCAAGAAGAAAAGCCAGATCCAAGTGAGATAACAAAAATAGCTGCAGAAGGGATTCTGACTTGTTTGCAAGATGCCATATGTTCTCTCGAGGAAAAACAGGACATTGGGAGAGTAACTGAGGACTGGAAATTCTTACCTCGAGTTGTTGAGGAGCTTGCAAAATTGGATGTTGTGGGAAACAATAAACCTTCAATGTCAAAGGAAGATATCCACAAACTAGCACTGGACTGCAAATGTATTTACGAGGAAGAACTAAATAGGTTAGATCATGAATCGACAAAGAAATCAAAGATAAATGAAGAACATAGGAGCAAAAATGGAAGAACAAATGCTGCATCTTCTTCTGGTGCAGTTGACTATGATAGTGATGATACAATCGAGATGACGGAACAAGAAATAGACCTTGCATATAAGACTTTATCCTCTAAGATGTGTCACCTGTGA

Protein sequence

>Msa0225740

MSSKRNLPSWMTSKEDDGHGNFGKRPTLDEGGEKSSEIGSSNKKTKVQNENAGKSSDFNKLMEGVVFVLSGFVNPERGILRSRAMEMGAEYKQDWNSNCTLLVCAFPNTPKFRQVEADCGTIVSKDWMQECYSQRKLVEIDSYLMHAGKPWRKGGRSHEVNEEQKPSVPHKPQKHVEGEPSKETTSIKSKGKDIDDPRKCFEPSEVKKWALDDLNKTIQWLESQEEKPDPSEITKIAAEGILTCLQDAICSLEEKQDIGRVTEDWKFLPRVVEELAKLDVVGNNKPSMSKEDIHKLALDCKCIYEEELNRLDHESTKKSKINEEHRSKNGRTNAASSSGAVDYDSDDTIEMTEQEIDLAYKTLSSKMCHL*