AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034270 MtrunA17_Chr1g0193801 97.288 295 8 0 4 298 10 304 0.0 599
Msa0034270 MtrunA17_Chr7g0270891 65.979 291 69 9 4 283 10 281 8.61e-123 355
Msa0034270 MtrunA17_Chr1g0193371 74.713 174 39 3 4 174 10 181 3.48e-84 257
Msa0034270 MtrunA17_Chr4g0058631 83.607 122 20 0 4 125 10 131 5.56e-75 233
Msa0034270 MtrunA17_Chr3g0117091 71.127 142 38 1 4 145 10 148 5.14e-69 218
Msa0034270 MtrunA17_Chr1g0211161 78.333 120 26 0 4 123 11 130 1.31e-68 213
Msa0034270 MtrunA17_Chr7g0271241 82.308 130 23 0 4 133 10 139 1.95e-68 217
Msa0034270 MtrunA17_Chr8g0342521 74.561 114 29 0 4 117 10 123 4.69e-61 197
Msa0034270 MtrunA17_Chr2g0309911 68.595 121 38 0 4 124 9 129 8.67e-61 196
Msa0034270 MtrunA17_Chr8g0342541 73.684 114 30 0 4 117 10 123 2.25e-60 196
Msa0034270 MtrunA17_Chr2g0330041 68.548 124 39 0 4 127 10 133 2.45e-60 197
Msa0034270 MtrunA17_Chr5g0395281 68.333 120 38 0 6 125 12 131 9.44e-59 190
Msa0034270 MtrunA17_Chr3g0115821 66.116 121 41 0 6 126 12 132 5.19e-58 189
Msa0034270 MtrunA17_Chr4g0039971 69.231 117 36 0 6 122 13 129 1.31e-57 189
Msa0034270 MtrunA17_Chr3g0088461 76.636 107 25 0 5 111 21 127 2.44e-57 187
Msa0034270 MtrunA17_Chr6g0453471 69.231 117 36 0 6 122 12 128 4.81e-57 187
Msa0034270 MtrunA17_Chr4g0032401 75.701 107 26 0 5 111 16 122 7.85e-57 186
Msa0034270 MtrunA17_Chr7g0217741 68.333 120 38 0 6 125 12 131 1.51e-56 184
Msa0034270 MtrunA17_Chr2g0328771 74.528 106 27 0 6 111 20 125 1.63e-56 185
Msa0034270 MtrunA17_Chr4g0042671 69.231 117 36 0 6 122 12 128 2.21e-56 187
Msa0034270 MtrunA17_Chr4g0037141 63.866 119 43 0 8 126 14 132 2.86e-56 183
Msa0034270 MtrunA17_Chr8g0385321 66.387 119 40 0 8 126 14 132 2.88e-56 184
Msa0034270 MtrunA17_Chr2g0281071 66.667 117 39 0 6 122 13 129 2.08e-55 182
Msa0034270 MtrunA17_Chr8g0387421 68.807 109 34 0 4 112 10 118 2.79e-55 181
Msa0034270 MtrunA17_Chr8g0342481 75.000 108 26 1 4 110 10 117 5.51e-55 183
Msa0034270 MtrunA17_Chr8g0349261 68.333 120 37 1 6 124 13 132 5.52e-55 180
Msa0034270 MtrunA17_Chr5g0410961 64.167 120 43 0 6 125 12 131 1.31e-54 181
Msa0034270 MtrunA17_Chr4g0048511 65.812 117 40 0 6 122 13 129 1.37e-54 181
Msa0034270 MtrunA17_Chr5g0435101 63.793 116 42 0 6 121 11 126 1.75e-54 176
Msa0034270 MtrunA17_Chr3g0131121 63.559 118 43 0 8 125 14 131 2.86e-54 178
Msa0034270 MtrunA17_Chr5g0397231 73.267 101 27 0 4 104 10 110 5.41e-54 179
Msa0034270 MtrunA17_Chr1g0203411 70.093 107 32 0 6 112 12 118 1.61e-53 176
Msa0034270 MtrunA17_Chr6g0452271 60.331 121 48 0 6 126 12 132 2.57e-53 177
Msa0034270 MtrunA17_Chr1g0203441 70.085 117 34 1 5 121 12 127 3.81e-53 174
Msa0034270 MtrunA17_Chr3g0110351 66.387 119 40 0 6 124 12 130 4.62e-53 176
Msa0034270 MtrunA17_Chr5g0434571 65.546 119 41 0 6 124 48 166 6.69e-53 176
Msa0034270 MtrunA17_Chr4g0044421 65.487 113 39 0 8 120 14 126 7.27e-53 171
Msa0034270 MtrunA17_Chr3g0103281 65.289 121 42 0 6 126 12 132 8.74e-53 175
Msa0034270 MtrunA17_Chr2g0323411 66.667 117 39 0 6 122 12 128 1.01e-52 175
Msa0034270 MtrunA17_Chr4g0057031 63.333 120 44 0 6 125 12 131 1.89e-52 173
Msa0034270 MtrunA17_Chr7g0274581 68.224 107 34 0 6 112 12 118 8.86e-52 169
Msa0034270 MtrunA17_Chr5g0417821 62.602 123 46 0 2 124 3 125 9.15e-52 171
Msa0034270 MtrunA17_Chr6g0470971 66.667 120 39 1 1 119 9 128 1.43e-51 171
Msa0034270 MtrunA17_Chr7g0228891 44.196 224 106 5 6 229 12 216 2.26e-51 170
Msa0034270 MtrunA17_Chr3g0121241 62.712 118 44 0 6 123 42 159 1.30e-49 166
Msa0034270 MtrunA17_Chr7g0261281 51.534 163 58 2 6 168 12 153 1.91e-49 165
Msa0034270 MtrunA17_Chr1g0187761 68.224 107 34 0 6 112 12 118 6.03e-49 163
Msa0034270 MtrunA17_Chr4g0022931 53.285 137 64 0 6 142 13 149 1.39e-48 163
Msa0034270 MtrunA17_Chr1g0167661 67.290 107 35 0 4 110 10 116 1.43e-48 162
Msa0034270 MtrunA17_Chr2g0323351 65.714 105 36 0 6 110 12 116 5.05e-48 160
Msa0034270 MtrunA17_Chr1g0167691 66.355 107 36 0 4 110 10 116 7.68e-48 160
Msa0034270 MtrunA17_Chr4g0022901 65.385 104 36 0 6 109 13 116 6.17e-47 159
Msa0034270 MtrunA17_Chr2g0311221 66.000 100 34 0 5 104 13 112 1.38e-45 157
Msa0034270 MtrunA17_Chr4g0022911 61.538 104 40 0 6 109 13 116 1.65e-45 155
Msa0034270 MtrunA17_Chr8g0342531 74.157 89 17 1 1 83 1 89 1.92e-44 149
Msa0034270 MtrunA17_Chr8g0346561 60.748 107 42 0 6 112 12 118 4.71e-44 152
Msa0034270 MtrunA17_Chr4g0068061 64.762 105 37 0 6 110 12 116 8.30e-44 152
Msa0034270 MtrunA17_Chr7g0247131 69.663 89 27 0 38 126 10 98 1.37e-43 150
Msa0034270 MtrunA17_Chr4g0070611 60.377 106 42 0 6 111 12 117 4.13e-43 149
Msa0034270 MtrunA17_Chr8g0342511 78.205 78 17 0 4 81 10 87 4.26e-43 143
Msa0034270 MtrunA17_Chr4g0022881 62.745 102 38 0 7 108 13 114 4.99e-43 147
Msa0034270 MtrunA17_Chr7g0275911 59.434 106 43 0 6 111 12 117 6.43e-43 147
Msa0034270 MtrunA17_Chr3g0099131 62.617 107 40 0 6 112 41 147 8.42e-43 154
Msa0034270 MtrunA17_Chr4g0070641 60.377 106 42 0 6 111 12 117 9.04e-43 144
Msa0034270 MtrunA17_Chr1g0151941 45.570 158 79 4 4 160 10 161 9.24e-43 147
Msa0034270 MtrunA17_Chr1g0152011 61.468 109 41 1 6 113 12 120 2.64e-42 148
Msa0034270 MtrunA17_Chr1g0154031 47.712 153 68 2 6 148 76 226 5.51e-42 149
Msa0034270 MtrunA17_Chr1g0194951 63.810 105 38 0 6 110 12 116 9.93e-42 147
Msa0034270 MtrunA17_Chr4g0028311 57.265 117 49 1 6 121 12 128 1.03e-41 146
Msa0034270 MtrunA17_Chr7g0228231 58.879 107 44 0 6 112 14 120 1.16e-41 143
Msa0034270 MtrunA17_Chr8g0354661 60.909 110 43 0 2 111 33 142 1.22e-41 150
Msa0034270 MtrunA17_Chr4g0022891 43.787 169 85 2 6 164 12 180 1.61e-41 144
Msa0034270 MtrunA17_Chr6g0450101 58.333 108 45 0 5 112 13 120 2.28e-41 142
Msa0034270 MtrunA17_Chr3g0135311 58.716 109 44 1 6 113 12 120 2.98e-41 146
Msa0034270 MtrunA17_Chr1g0209661 50.407 123 61 0 5 127 26 148 3.07e-41 145
Msa0034270 MtrunA17_Chr5g0400821 59.633 109 43 1 6 113 12 120 4.75e-41 144
Msa0034270 MtrunA17_Chr8g0343831 56.364 110 48 0 4 113 6 115 1.26e-40 142
Msa0034270 MtrunA17_Chr2g0327351 64.000 100 35 1 6 104 12 111 1.44e-40 143
Msa0034270 MtrunA17_Chr1g0186061 60.000 105 42 0 5 109 19 123 1.82e-40 141
Msa0034270 MtrunA17_Chr1g0180391 52.899 138 58 2 1 137 14 145 2.00e-40 140
Msa0034270 MtrunA17_Chr4g0055981 60.577 104 41 0 6 109 55 158 3.82e-40 140
Msa0034270 MtrunA17_Chr3g0080861 57.547 106 45 0 6 111 37 142 3.96e-40 146
Msa0034270 MtrunA17_Chr8g0342461 74.074 81 20 1 4 83 10 90 4.15e-40 137
Msa0034270 MtrunA17_Chr7g0217221 56.075 107 47 0 6 112 12 118 5.83e-40 140
Msa0034270 MtrunA17_Chr4g0060721 50.000 132 57 2 6 131 13 141 6.38e-40 142
Msa0034270 MtrunA17_Chr4g0054391 62.626 99 36 1 6 103 12 110 6.98e-40 141
Msa0034270 MtrunA17_Chr3g0092401 57.009 107 46 0 6 112 13 119 7.30e-40 141
Msa0034270 MtrunA17_Chr8g0342471 72.840 81 21 1 4 83 10 90 1.60e-39 135
Msa0034270 MtrunA17_Chr1g0168661 56.757 111 48 0 1 111 16 126 2.93e-39 138
Msa0034270 MtrunA17_Chr7g0254411 54.386 114 50 1 6 117 12 125 4.30e-39 140
Msa0034270 MtrunA17_Chr7g0264641 57.547 106 44 1 6 110 12 117 5.91e-39 138
Msa0034270 MtrunA17_Chr7g0269831 57.031 128 54 1 6 132 12 139 2.09e-38 139
Msa0034270 MtrunA17_Chr6g0453211 58.586 99 41 0 6 104 12 110 3.54e-38 137
Msa0034270 MtrunA17_Chr7g0240821 60.000 100 40 0 11 110 6 105 6.51e-38 134
Msa0034270 MtrunA17_Chr2g0322521 60.377 106 42 0 6 111 29 134 7.93e-38 138
Msa0034270 MtrunA17_Chr5g0434931 54.206 107 49 0 4 110 33 139 8.98e-38 135
Msa0034270 MtrunA17_Chr5g0434831 58.095 105 44 0 6 110 7 111 9.66e-38 132
Msa0034270 MtrunA17_Chr1g0194301 53.153 111 52 0 6 116 33 143 1.18e-37 134
Msa0034270 MtrunA17_Chr1g0194291 54.955 111 50 0 6 116 21 131 2.25e-37 134
Msa0034270 MtrunA17_Chr4g0072751 59.000 100 40 1 6 104 12 111 5.73e-37 134
Msa0034270 MtrunA17_Chr5g0434911 53.211 109 51 0 2 110 17 125 7.71e-37 132
Msa0034270 MtrunA17_Chr1g0192411 57.009 107 46 0 5 111 11 117 8.63e-37 135
Msa0034270 MtrunA17_Chr5g0434841 53.211 109 51 0 2 110 16 124 5.60e-36 131
Msa0034270 MtrunA17_Chr6g0487491 54.386 114 43 2 5 109 11 124 6.07e-36 130
Msa0034270 MtrunA17_Chr7g0220341 53.636 110 49 1 6 113 25 134 8.09e-36 130
Msa0034270 MtrunA17_Chr8g0360111 57.426 101 43 0 6 106 25 125 8.39e-36 129
Msa0034270 MtrunA17_Chr2g0327821 34.661 251 129 4 1 248 1 219 8.53e-36 129
Msa0034270 MtrunA17_Chr7g0228991 53.271 107 50 0 4 110 27 133 2.05e-35 129
Msa0034270 MtrunA17_Chr4g0013361 48.936 141 66 4 6 143 10 147 4.30e-35 128
Msa0034270 MtrunA17_Chr8g0334881 55.140 107 47 1 6 111 10 116 8.98e-35 128
Msa0034270 MtrunA17_Chr5g0440781 50.442 113 54 2 7 118 13 124 1.50e-34 124
Msa0034270 MtrunA17_Chr4g0030881 50.877 114 49 1 7 113 8 121 3.92e-34 125
Msa0034270 MtrunA17_Chr5g0440761 50.893 112 53 2 7 117 13 123 6.82e-34 124
Msa0034270 MtrunA17_Chr5g0441141 50.893 112 53 2 7 117 13 123 7.48e-34 124
Msa0034270 MtrunA17_Chr4g0042611 62.821 78 29 0 5 82 11 88 1.18e-33 118
Msa0034270 MtrunA17_Chr2g0293911 54.054 111 51 0 6 116 24 134 7.18e-33 123
Msa0034270 MtrunA17_Chr4g0068921 54.054 111 51 0 6 116 24 134 1.12e-32 119
Msa0034270 MtrunA17_Chr5g0395221 66.234 77 26 0 6 82 12 88 3.36e-32 114
Msa0034270 MtrunA17_Chr4g0008551 46.154 156 73 5 8 159 38 186 5.13e-32 121
Msa0034270 MtrunA17_Chr2g0323321 61.728 81 31 0 6 86 11 91 6.34e-32 114
Msa0034270 MtrunA17_Chr5g0441131 44.030 134 73 2 7 139 10 142 1.04e-31 116
Msa0034270 MtrunA17_Chr3g0093811 46.763 139 70 1 38 172 14 152 1.39e-31 118
Msa0034270 MtrunA17_Chr3g0099141 59.036 83 34 0 6 88 40 122 2.65e-31 114
Msa0034270 MtrunA17_Chr4g0053431 52.941 102 47 1 8 109 5 105 8.97e-29 111
Msa0034270 MtrunA17_Chr5g0429661 46.154 104 55 1 6 109 120 222 1.06e-28 112
Msa0034270 MtrunA17_Chr2g0294811 63.636 77 28 0 6 82 12 88 2.91e-28 105
Msa0034270 MtrunA17_Chr5g0401731 48.276 116 59 1 8 123 15 129 1.04e-27 109
Msa0034270 MtrunA17_Chr6g0454921 47.748 111 57 1 8 118 15 124 1.29e-26 103
Msa0034270 MtrunA17_Chr7g0238631 40.719 167 85 5 5 164 110 269 1.42e-26 109
Msa0034270 MtrunA17_Chr3g0133601 50.000 102 50 1 8 109 37 137 2.39e-25 100
Msa0034270 MtrunA17_Chr3g0139671 47.170 106 55 1 5 110 82 186 2.72e-25 105
Msa0034270 MtrunA17_Chr6g0453751 54.839 93 33 2 6 89 20 112 4.37e-25 97.4
Msa0034270 MtrunA17_Chr6g0480581 41.379 116 66 2 8 123 4 117 9.79e-25 99.8
Msa0034270 MtrunA17_Chr3g0117511 35.329 167 97 5 8 170 183 342 1.01e-24 103
Msa0034270 MtrunA17_Chr7g0229101 60.000 70 28 0 38 107 4 73 2.24e-24 97.8
Msa0034270 MtrunA17_Chr1g0157731 45.283 106 57 1 5 110 88 192 2.52e-24 103
Msa0034270 MtrunA17_Chr4g0058991 41.284 109 61 2 6 113 207 313 2.79e-24 102
Msa0034270 MtrunA17_Chr5g0434901 60.294 68 27 0 40 107 7 74 3.28e-24 94.7
Msa0034270 MtrunA17_Chr4g0042501 41.964 112 63 2 3 113 99 209 5.65e-24 100
Msa0034270 MtrunA17_Chr6g0460661 41.593 113 63 2 1 112 9 119 7.84e-24 95.1
Msa0034270 MtrunA17_Chr5g0417621 40.367 109 64 1 5 113 131 238 1.18e-23 100
Msa0034270 MtrunA17_Chr7g0229131 58.571 70 29 0 39 108 5 74 1.40e-23 94.7
Msa0034270 MtrunA17_Chr5g0437321 48.485 99 50 1 8 106 19 116 1.66e-23 97.4
Msa0034270 MtrunA17_Chr7g0228531 39.130 115 66 3 1 113 211 323 9.87e-23 97.4
Msa0034270 MtrunA17_Chr5g0425591 48.810 84 42 1 7 89 10 93 3.12e-22 89.0
Msa0034270 MtrunA17_Chr3g0125801 43.925 107 57 2 8 113 16 120 3.33e-22 94.0
Msa0034270 MtrunA17_Chr5g0397841 45.918 98 52 1 6 103 108 204 3.39e-22 96.3
Msa0034270 MtrunA17_Chr6g0460671 40.952 105 61 1 8 112 99 202 5.75e-22 94.4
Msa0034270 MtrunA17_Chr7g0228401 45.977 87 46 1 19 105 290 375 9.78e-22 95.1
Msa0034270 MtrunA17_Chr1g0177901 38.346 133 66 4 19 143 5 129 1.25e-21 90.5
Msa0034270 MtrunA17_Chr7g0228481 38.655 119 66 4 1 114 211 327 8.70e-21 91.7
Msa0034270 MtrunA17_Chr7g0254261 40.517 116 68 1 8 123 89 203 2.23e-20 90.1
Msa0034270 MtrunA17_Chr7g0238651 37.069 116 65 2 11 118 10 125 1.24e-19 87.8
Msa0034270 MtrunA17_Chr5g0416341 36.190 105 66 1 11 115 29 132 3.65e-17 81.3
Msa0034270 MtrunA17_Chr7g0233061 36.792 106 63 3 8 113 180 281 4.34e-17 80.5
Msa0034270 MtrunA17_Chr1g0193901 50.562 89 42 2 4 90 9 97 2.75e-16 73.6
Msa0034270 MtrunA17_Chr1g0193891 50.562 89 42 2 4 90 9 97 2.75e-16 73.6
Msa0034270 MtrunA17_Chr1g0193871 50.562 89 42 2 4 90 9 97 2.75e-16 73.6
Msa0034270 MtrunA17_Chr1g0193881 50.562 89 42 2 4 90 9 97 2.75e-16 73.6
Msa0034270 MtrunA17_Chr8g0362231 35.354 99 63 1 11 109 25 122 1.42e-15 76.6
Msa0034270 MtrunA17_Chr5g0395231 62.745 51 19 0 72 122 5 55 3.67e-15 73.6
Msa0034270 MtrunA17_Chr4g0042621 77.500 40 9 0 83 122 15 54 3.10e-13 69.3
Msa0034270 MtrunA17_Chr3g0104491 37.931 87 47 3 47 126 1 87 2.24e-12 66.2
Msa0034270 MtrunA17_Chr5g0434871 55.814 43 19 0 68 110 2 44 1.10e-11 59.7
Msa0034270 MtrunA17_Chr3g0145551 60.976 41 16 0 85 125 1 41 2.01e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034270 AT4G01680.3 83.217 143 23 1 4 146 10 151 8.46e-84 252
Msa0034270 AT4G01680.1 83.217 143 23 1 4 146 10 151 5.27e-83 254
Msa0034270 AT1G57560.1 49.286 280 130 6 4 272 10 288 3.07e-81 248
Msa0034270 AT4G01680.2 76.774 155 23 2 4 146 10 163 1.69e-79 245
Msa0034270 AT1G57560.2 87.097 124 16 0 4 127 10 133 1.02e-77 238
Msa0034270 AT1G09540.1 86.290 124 17 0 4 127 10 133 3.74e-76 237
Msa0034270 AT5G26660.1 85.833 120 17 0 4 123 10 129 5.48e-75 234
Msa0034270 AT3G12720.1 71.552 116 33 0 5 120 21 136 1.16e-62 201
Msa0034270 AT3G13890.2 75.701 107 26 0 4 110 10 116 2.82e-59 193
Msa0034270 AT3G61250.1 70.339 118 35 0 6 123 12 129 4.38e-59 191
Msa0034270 AT3G02940.2 66.667 120 40 0 6 125 12 131 9.90e-59 191
Msa0034270 AT3G02940.1 66.667 120 40 0 6 125 12 131 2.06e-58 190
Msa0034270 AT3G02940.3 66.667 120 40 0 6 125 12 131 2.06e-58 190
Msa0034270 AT5G16770.4 66.667 120 40 0 6 125 12 131 3.78e-58 189
Msa0034270 AT5G16770.3 66.667 120 40 0 6 125 12 131 3.78e-58 189
Msa0034270 AT5G16770.1 66.667 120 40 0 6 125 12 131 1.17e-57 189
Msa0034270 AT5G16770.2 66.667 120 40 0 6 125 12 131 1.17e-57 189
Msa0034270 AT1G63910.1 67.227 119 39 0 4 122 10 128 2.79e-57 189
Msa0034270 AT5G15310.1 68.333 120 38 0 6 125 12 131 4.74e-57 187
Msa0034270 AT5G15310.4 68.333 120 38 0 6 125 12 131 4.81e-57 184
Msa0034270 AT5G15310.2 68.333 120 38 0 6 125 12 131 5.22e-57 186
Msa0034270 AT5G12870.1 73.394 109 29 0 4 112 16 124 9.93e-57 184
Msa0034270 AT5G65230.1 67.500 120 39 0 6 125 12 131 1.03e-56 185
Msa0034270 AT5G10280.1 65.289 121 42 0 6 126 12 132 1.11e-56 186
Msa0034270 AT4G34990.1 58.273 139 57 1 8 145 14 152 1.80e-56 184
Msa0034270 AT4G05100.1 66.667 117 39 0 6 122 13 129 2.47e-56 185
Msa0034270 AT3G01140.2 69.828 116 35 0 6 121 12 127 3.52e-56 185
Msa0034270 AT3G13890.1 69.828 116 26 1 4 110 10 125 3.56e-56 186
Msa0034270 AT3G01140.1 69.828 116 35 0 6 121 55 170 1.21e-55 185
Msa0034270 AT5G60890.1 58.015 131 55 0 2 132 8 138 1.69e-55 182
Msa0034270 AT4G21440.1 66.667 117 39 0 6 122 12 128 2.04e-55 183
Msa0034270 AT5G16600.1 64.122 131 47 0 6 136 12 142 2.17e-55 182
Msa0034270 AT1G34670.1 65.289 121 42 0 6 126 12 132 3.16e-55 183
Msa0034270 AT3G08500.1 74.766 107 27 0 5 111 29 135 3.60e-55 182
Msa0034270 AT4G38620.1 55.405 148 55 2 8 152 14 153 5.46e-55 180
Msa0034270 AT1G66230.1 62.406 133 50 0 6 138 12 144 6.28e-55 180
Msa0034270 AT1G74430.1 66.667 117 39 0 6 122 12 128 9.44e-55 179
Msa0034270 AT2G16720.1 63.333 120 44 0 6 125 12 131 1.08e-54 179
Msa0034270 AT4G09460.1 52.532 158 75 0 8 165 14 171 2.26e-54 177
Msa0034270 AT1G18570.1 63.866 119 43 0 6 124 13 131 7.64e-54 179
Msa0034270 AT5G61420.2 62.602 123 46 0 6 128 12 134 1.07e-53 179
Msa0034270 AT5G56110.1 65.289 121 42 0 6 126 12 132 1.08e-53 178
Msa0034270 AT5G07700.1 52.381 168 65 2 6 158 12 179 1.27e-53 178
Msa0034270 AT5G07700.2 52.381 168 65 2 6 158 12 179 1.27e-53 178
Msa0034270 AT4G28110.1 64.957 117 41 0 6 122 12 128 1.43e-53 176
Msa0034270 AT5G07690.1 61.719 128 49 0 6 133 12 139 1.45e-53 178
Msa0034270 AT4G12350.1 63.636 121 44 0 6 126 12 132 1.52e-53 176
Msa0034270 AT4G17785.2 64.463 121 43 0 2 122 9 129 1.60e-53 178
Msa0034270 AT4G17785.1 64.463 121 43 0 2 122 9 129 2.02e-53 178
Msa0034270 AT4G22680.1 63.333 120 44 0 6 125 12 131 3.65e-53 175
Msa0034270 AT1G22640.1 61.667 120 46 0 6 125 12 131 4.48e-53 174
Msa0034270 AT5G54230.1 64.957 117 41 0 6 122 12 128 5.97e-53 176
Msa0034270 AT5G26660.2 83.333 90 15 0 34 123 9 98 1.14e-51 172
Msa0034270 AT5G14340.1 51.572 159 74 1 6 164 24 179 2.54e-51 170
Msa0034270 AT1G74080.1 60.656 122 48 0 2 123 8 129 2.87e-51 172
Msa0034270 AT3G48920.1 67.273 110 36 0 4 113 16 125 1.18e-50 168
Msa0034270 AT1G18710.1 61.017 118 46 0 6 123 12 129 1.74e-50 168
Msa0034270 AT1G35515.1 60.000 120 48 0 6 125 12 131 3.85e-50 165
Msa0034270 AT3G13540.1 62.712 118 44 0 6 123 23 140 4.85e-50 166
Msa0034270 AT3G28470.1 61.983 121 46 0 6 126 12 132 1.62e-49 167
Msa0034270 AT1G79180.1 68.519 108 34 0 5 112 13 120 3.13e-49 166
Msa0034270 AT2G31180.1 49.693 163 81 1 6 167 12 174 1.01e-48 163
Msa0034270 AT3G23250.1 65.714 105 36 0 6 110 12 116 1.28e-48 164
Msa0034270 AT5G62320.1 57.463 134 50 1 6 132 13 146 7.12e-48 160
Msa0034270 AT1G16490.1 48.588 177 71 2 5 173 13 177 6.66e-47 159
Msa0034270 AT4G25560.1 70.874 103 30 0 7 109 11 113 9.03e-47 159
Msa0034270 AT1G06180.1 65.421 107 37 0 6 112 12 118 1.52e-46 157
Msa0034270 AT1G56160.1 66.038 106 36 0 5 110 13 118 2.74e-46 158
Msa0034270 AT5G52260.1 69.811 106 32 0 4 109 10 115 1.10e-45 155
Msa0034270 AT5G35550.1 62.727 110 41 0 1 110 9 118 5.96e-44 150
Msa0034270 AT3G12820.1 62.385 109 41 0 5 113 13 121 2.71e-43 148
Msa0034270 AT5G23000.1 62.617 107 39 1 5 110 11 117 4.74e-43 150
Msa0034270 AT5G49330.1 41.629 221 93 4 6 220 12 202 7.33e-43 150
Msa0034270 AT5G06100.1 63.208 106 39 0 6 111 32 137 1.00e-42 152
Msa0034270 AT5G57620.1 60.526 114 42 2 6 116 12 125 1.44e-42 149
Msa0034270 AT5G14750.1 56.731 104 45 0 7 110 17 120 1.61e-42 145
Msa0034270 AT1G79180.2 52.482 141 34 1 5 112 13 153 1.93e-42 149
Msa0034270 AT3G27810.1 55.856 111 49 0 5 115 19 129 3.43e-42 145
Msa0034270 AT5G06100.5 63.208 106 39 0 6 111 32 137 3.75e-42 152
Msa0034270 AT5G06100.2 63.208 106 39 0 6 111 32 137 3.75e-42 152
Msa0034270 AT5G06100.3 63.208 106 39 0 6 111 32 137 3.75e-42 152
Msa0034270 AT5G06100.4 63.208 106 39 0 6 111 32 137 3.75e-42 152
Msa0034270 AT2G47460.1 57.025 121 52 0 6 126 12 132 6.71e-42 148
Msa0034270 AT3G01530.1 57.547 106 45 0 6 111 25 130 6.97e-42 144
Msa0034270 AT3G49690.1 61.468 109 41 1 6 113 12 120 7.82e-42 147
Msa0034270 AT3G62610.1 62.857 105 39 0 6 110 12 116 1.07e-41 147
Msa0034270 AT5G55020.1 60.748 107 42 0 6 112 26 132 1.28e-41 150
Msa0034270 AT3G11440.2 60.377 106 42 0 6 111 41 146 2.98e-41 149
Msa0034270 AT5G65790.1 60.550 109 42 1 6 113 12 120 3.24e-41 147
Msa0034270 AT5G40350.1 56.364 110 48 0 5 114 16 125 4.04e-41 142
Msa0034270 AT5G40330.1 55.769 104 46 0 7 110 13 116 4.09e-41 142
Msa0034270 AT4G26930.1 59.813 107 43 0 6 112 19 125 4.43e-41 147
Msa0034270 AT3G47600.1 57.944 107 45 0 6 112 12 118 7.87e-41 145
Msa0034270 AT2G32460.1 55.856 111 49 0 1 111 13 123 9.70e-41 148
Msa0034270 AT3G11440.3 60.377 106 42 0 6 111 41 146 1.32e-40 148
Msa0034270 AT3G11440.4 60.377 106 42 0 6 111 41 146 1.32e-40 148
Msa0034270 AT3G11440.1 60.377 106 42 0 6 111 41 146 1.32e-40 148
Msa0034270 AT2G32460.2 55.856 111 49 0 1 111 1 111 1.69e-40 147
Msa0034270 AT1G74650.1 59.434 106 43 0 5 110 11 116 1.75e-40 144
Msa0034270 AT5G62470.2 58.879 107 44 0 6 112 12 118 1.90e-40 144
Msa0034270 AT5G52600.1 45.033 151 68 2 6 141 12 162 2.53e-40 139
Msa0034270 AT2G26960.1 35.897 234 123 4 4 216 18 245 2.57e-40 145
Msa0034270 AT3G27920.1 52.336 107 51 0 4 110 12 118 4.68e-40 140
Msa0034270 AT4G37780.1 44.382 178 85 5 6 182 12 176 4.74e-40 142
Msa0034270 AT1G08810.1 55.856 111 49 0 6 116 12 122 1.17e-39 140
Msa0034270 AT2G36890.1 56.034 116 50 1 6 120 12 127 1.33e-39 140
Msa0034270 AT2G36890.2 56.034 116 50 1 6 120 53 168 2.03e-39 141
Msa0034270 AT4G13480.1 58.559 111 46 0 1 111 1 111 2.19e-39 139
Msa0034270 AT3G28910.1 59.048 105 43 0 6 110 12 116 2.32e-39 140
Msa0034270 AT3G24310.1 60.000 105 42 0 7 111 19 123 9.56e-39 137
Msa0034270 AT5G62470.1 58.879 107 43 1 6 112 12 117 1.14e-38 139
Msa0034270 AT1G25340.1 46.358 151 67 2 7 145 19 167 1.19e-38 137
Msa0034270 AT3G30210.1 60.784 102 40 0 7 108 28 129 2.12e-38 137
Msa0034270 AT1G48000.1 56.731 104 45 0 5 108 31 134 7.79e-38 134
Msa0034270 AT1G68320.1 54.867 113 51 0 4 116 17 129 1.41e-37 135
Msa0034270 AT1G66370.1 56.604 106 46 0 4 109 6 111 8.97e-37 132
Msa0034270 AT3G53200.1 55.556 108 48 0 2 109 5 112 1.43e-36 131
Msa0034270 AT2G26950.1 52.252 111 50 1 4 114 14 121 5.92e-36 133
Msa0034270 AT2G47190.1 49.550 111 56 0 6 116 20 130 1.80e-35 129
Msa0034270 AT5G59780.3 52.252 111 53 0 3 113 5 115 2.77e-35 127
Msa0034270 AT1G56650.1 51.181 127 54 1 4 122 6 132 5.39e-35 127
Msa0034270 AT3G46130.1 51.327 113 55 0 1 113 4 116 7.41e-35 127
Msa0034270 AT1G66380.1 59.434 106 43 0 4 109 6 111 1.27e-34 123
Msa0034270 AT1G25340.2 44.371 151 65 3 7 145 19 162 7.90e-34 125
Msa0034270 AT3G06490.1 56.757 111 48 0 6 116 19 129 9.99e-34 125
Msa0034270 AT1G25340.3 44.371 151 65 3 7 145 19 162 1.84e-33 125
Msa0034270 AT3G60460.1 48.333 120 55 2 2 120 7 120 1.91e-33 124
Msa0034270 AT1G66390.1 58.491 106 44 0 4 109 6 111 5.11e-33 122
Msa0034270 AT5G49620.1 54.054 111 51 0 6 116 26 136 1.27e-31 120
Msa0034270 AT5G35550.2 63.043 92 26 1 19 110 38 121 2.97e-31 117
Msa0034270 AT3G12820.2 69.444 72 22 0 42 113 2 73 3.94e-31 115
Msa0034270 AT3G27810.2 61.039 77 30 0 39 115 4 80 1.21e-30 114
Msa0034270 AT5G14750.3 63.889 72 26 0 42 113 18 89 2.16e-29 110
Msa0034270 AT5G40350.2 61.842 76 29 0 39 114 5 80 3.55e-29 109
Msa0034270 AT3G46130.3 61.842 76 29 0 38 113 9 84 1.65e-28 109
Msa0034270 AT3G47600.2 53.684 95 40 1 18 112 22 112 1.97e-28 112
Msa0034270 AT3G46130.4 61.039 77 30 0 37 113 18 94 3.27e-28 109
Msa0034270 AT5G59780.2 61.039 77 30 0 37 113 18 94 3.60e-28 108
Msa0034270 AT3G53200.2 63.158 76 28 0 34 109 4 79 4.34e-28 108
Msa0034270 AT5G49620.2 48.000 125 51 1 6 116 26 150 4.43e-28 110
Msa0034270 AT1G18960.1 43.333 120 63 3 8 126 10 125 5.53e-28 110
Msa0034270 AT1G22640.3 60.811 74 29 0 52 125 1 74 7.58e-28 107
Msa0034270 AT4G18770.1 45.370 108 58 1 6 113 215 321 1.49e-27 111
Msa0034270 AT5G67300.1 51.961 102 48 1 8 109 6 106 3.73e-27 108
Msa0034270 AT5G40360.1 45.045 111 56 3 3 110 150 258 4.91e-27 108
Msa0034270 AT5G58850.1 45.283 106 57 1 4 109 101 205 1.26e-26 108
Msa0034270 AT4G37260.1 44.361 133 66 2 8 140 13 137 1.78e-26 106
Msa0034270 AT2G39880.1 54.369 103 44 2 8 109 50 150 4.16e-26 106
Msa0034270 AT3G27785.1 43.590 117 61 3 6 119 187 301 5.15e-26 107
Msa0034270 AT5G11050.1 37.255 153 74 4 3 134 100 251 6.26e-26 106
Msa0034270 AT3G50060.1 51.961 102 48 1 8 109 6 106 6.67e-26 104
Msa0034270 AT1G71030.2 55.844 77 34 0 45 121 5 81 1.24e-25 100
Msa0034270 AT5G02320.3 47.170 106 55 1 5 110 64 168 1.42e-25 106
Msa0034270 AT5G02320.1 47.170 106 55 1 5 110 124 228 1.43e-25 106
Msa0034270 AT5G02320.2 47.170 106 55 1 5 110 124 228 1.43e-25 106
Msa0034270 AT1G71030.1 55.844 77 34 0 45 121 19 95 1.70e-25 100
Msa0034270 AT3G09370.1 49.038 104 52 1 6 109 128 230 1.78e-25 106
Msa0034270 AT3G09370.2 49.038 104 52 1 6 109 133 235 1.79e-25 106
Msa0034270 AT3G09370.3 49.038 104 52 1 6 109 141 243 3.00e-25 105
Msa0034270 AT3G55730.1 52.427 103 46 2 8 109 56 156 3.65e-25 104
Msa0034270 AT3G09230.1 48.544 103 52 1 8 110 55 156 5.35e-25 103
Msa0034270 AT1G17950.1 43.396 106 59 1 8 113 5 109 8.41e-25 100
Msa0034270 AT3G23250.2 68.333 60 19 0 52 111 1 60 1.08e-24 99.8
Msa0034270 AT5G11510.3 45.283 106 57 1 5 110 78 182 1.70e-24 103
Msa0034270 AT5G11510.1 45.283 106 57 1 5 110 78 182 1.70e-24 103
Msa0034270 AT5G11510.4 45.283 106 57 1 5 110 78 182 1.70e-24 103
Msa0034270 AT5G11510.2 45.283 106 57 1 5 110 78 182 2.49e-24 103
Msa0034270 AT2G23290.1 43.609 133 73 2 8 140 13 143 2.97e-24 100
Msa0034270 AT5G11510.5 45.283 106 57 1 5 110 78 182 2.99e-24 103
Msa0034270 AT1G69560.1 41.284 109 61 2 6 113 105 211 9.38e-24 99.4
Msa0034270 AT1G69560.2 41.284 109 61 2 6 113 121 227 1.17e-23 99.4
Msa0034270 AT1G73410.1 47.170 106 53 2 8 112 6 109 2.12e-23 96.7
Msa0034270 AT1G26780.1 42.593 108 59 2 6 112 96 201 2.66e-23 97.1
Msa0034270 AT1G26780.2 42.593 108 59 2 6 112 96 201 3.07e-23 98.2
Msa0034270 AT4G32730.5 44.340 106 58 1 5 110 84 188 3.31e-23 100
Msa0034270 AT4G32730.4 44.340 106 58 1 5 110 84 188 3.31e-23 100
Msa0034270 AT4G32730.3 44.340 106 58 1 5 110 84 188 3.31e-23 100
Msa0034270 AT4G32730.2 44.340 106 58 1 5 110 84 188 3.31e-23 100
Msa0034270 AT4G32730.1 44.340 106 58 1 5 110 84 188 4.16e-23 99.8
Msa0034270 AT1G73410.2 47.170 106 53 2 8 112 6 109 9.03e-23 94.0
Msa0034270 AT1G66380.2 58.750 80 33 0 4 83 6 85 9.60e-23 91.3
Msa0034270 AT4G33450.1 40.566 106 62 1 7 112 18 122 1.70e-22 94.4
Msa0034270 AT2G25230.1 38.333 120 71 2 1 118 19 137 1.91e-22 94.0
Msa0034270 AT1G66380.3 58.442 77 32 0 33 109 2 78 3.24e-22 89.7
Msa0034270 AT5G17800.1 40.000 105 62 1 8 112 93 196 1.55e-21 93.2
Msa0034270 AT3G29020.1 37.838 111 68 1 8 118 65 174 5.11e-21 89.7
Msa0034270 AT3G29020.2 38.679 106 64 1 8 113 67 171 5.70e-21 91.3
Msa0034270 AT5G14750.4 58.065 62 26 0 52 113 1 62 1.28e-20 86.3
Msa0034270 AT5G14750.2 58.065 62 26 0 52 113 1 62 1.28e-20 86.3
Msa0034270 AT2G02820.3 39.048 105 63 1 11 115 33 136 7.13e-20 88.6
Msa0034270 AT4G00540.2 43.636 110 58 2 6 112 101 209 9.16e-20 89.0
Msa0034270 AT2G02820.1 39.048 105 63 1 11 115 33 136 1.34e-19 89.0
Msa0034270 AT4G00540.1 43.636 110 58 2 6 112 99 207 1.65e-19 88.6
Msa0034270 AT2G02820.2 39.048 105 63 1 11 115 33 136 2.00e-19 88.6
Msa0034270 AT5G40430.1 38.053 113 67 3 1 113 47 156 2.83e-19 85.5
Msa0034270 AT1G14350.2 40.000 105 62 1 11 115 28 131 1.77e-18 85.5
Msa0034270 AT1G14350.1 40.000 105 62 1 11 115 28 131 1.77e-18 85.5
Msa0034270 AT5G61420.1 68.519 54 17 0 75 128 2 55 3.83e-18 83.2
Msa0034270 AT2G37630.1 35.652 115 67 2 11 118 7 121 4.95e-17 80.9
Msa0034270 AT5G39700.1 33.333 117 77 1 2 118 50 165 3.54e-16 75.9
Msa0034270 AT1G74430.2 61.538 52 20 0 71 122 8 59 1.85e-15 73.9
Msa0034270 AT4G28110.2 73.171 41 11 0 82 122 4 44 8.76e-15 72.0
Msa0034270 AT5G15310.3 72.727 44 12 0 82 125 9 52 3.03e-14 71.6
Msa0034270 AT5G14340.2 40.964 83 46 1 82 164 10 89 3.19e-14 70.1
Msa0034270 AT5G59780.1 59.574 47 19 0 67 113 4 50 2.52e-13 67.4
Msa0034270 AT3G46130.2 59.574 47 19 0 67 113 4 50 2.97e-13 67.8
Msa0034270 AT1G14350.3 45.455 66 36 0 50 115 23 88 1.07e-12 68.2
Msa0034270 AT1G14350.4 45.455 66 36 0 50 115 23 88 1.07e-12 68.2
Msa0034270 AT4G25560.2 65.217 46 16 0 64 109 2 47 1.66e-12 65.9
Msa0034270 AT3G18100.1 37.500 96 59 1 7 102 545 639 6.23e-12 66.6
Msa0034270 AT3G18100.4 37.500 96 59 1 7 102 384 478 7.36e-12 66.2
Msa0034270 AT3G18100.3 37.500 96 59 1 7 102 497 591 9.15e-12 66.2
Msa0034270 AT3G18100.2 37.500 96 59 1 7 102 332 426 1.06e-11 65.9
Msa0034270 AT1G22640.2 59.091 44 18 0 82 125 16 59 1.74e-11 62.4

Find 69 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCTTGGGAGGATTAA+TGG 0.195427 1_1:+62210411 Msa0034270:CDS
ACAATGAAATAAAGAATTTA+TGG 0.200655 1_1:+62209811 Msa0034270:CDS
ATTGTTGTTATGTAAGTTTA+AGG 0.238149 1_1:-62210387 None:intergenic
ATTTCCATTGCATATGCTTT+TGG 0.239502 1_1:-62210053 None:intergenic
CAAATATCAACAAAGCAAAA+AGG 0.282988 1_1:-62210818 None:intergenic
TTTCAAAAGGTTCAATTCAT+TGG 0.290203 1_1:-62209967 None:intergenic
CAGAAACTCAGAGAAGCTTT+TGG 0.294526 1_1:+62210634 Msa0034270:three_prime_UTR
GAGAATAATGGAGAGGAAAA+TGG 0.306414 1_1:+62209906 Msa0034270:CDS
CATTCAACCCTCAGATTTGA+TGG 0.319312 1_1:+62210115 Msa0034270:CDS
AACTTTGTACCAGATAGTTT+TGG 0.328603 1_1:+62210538 Msa0034270:three_prime_UTR
CTACTAGTGTTTGAATCATT+TGG 0.336320 1_1:-62210188 None:intergenic
TCAGAAGCAAGCATTAAGAT+AGG 0.337065 1_1:-62210481 None:intergenic
TCAAATTGCGGCGCAATTGC+CGG 0.343894 1_1:+62209779 Msa0034270:CDS
TGGGGTAGAATTGGTGAATA+AGG 0.350617 1_1:+62210873 Msa0034270:three_prime_UTR
GTTGAACTTCATGCAGTACT+AGG 0.358540 1_1:+62209587 Msa0034270:CDS
AAGAAGAGACTGAGACAAAA+AGG 0.366324 1_1:+62209846 Msa0034270:CDS
AAAATAGCTCCAAAACTATC+TGG 0.372468 1_1:-62210547 None:intergenic
AACCATTGGTTCAACCAAAC+TGG 0.373334 1_1:+62210212 Msa0034270:CDS
CAAATTGCGGCGCAATTGCC+GGG 0.376424 1_1:+62209780 Msa0034270:CDS
AAAAGCATATGCAATGGAAA+TGG 0.406668 1_1:+62210055 Msa0034270:CDS
TCTGAGTTTCTGAATGTCCT+TGG 0.406727 1_1:-62210623 None:intergenic
TTGTCTGAGATTGAGAATAA+TGG 0.407472 1_1:+62209894 Msa0034270:CDS
TCTTGTTCTTGCTTTGTATG+AGG 0.413126 1_1:-62210571 None:intergenic
CTGAGGCATATAACAAAGTA+TGG 0.421343 1_1:+62209321 Msa0034270:CDS
TTGAACTCTCTGATTTCAAA+AGG 0.423755 1_1:-62209980 None:intergenic
GTGGTAAGAGCTGCAGGCTT+AGG 0.429634 1_1:+62209498 Msa0034270:CDS
GATAATTTACCTGCTTGCTT+AGG 0.447899 1_1:-62209366 None:intergenic
CTATGAGTGTGGGGTAGAAT+TGG 0.448665 1_1:+62210864 Msa0034270:three_prime_UTR
GTTGTTACAAGCAGAAGCTT+AGG 0.455012 1_1:+62209262 Msa0034270:intron
TTCCAGTTTGGTTGAACCAA+TGG 0.463181 1_1:-62210214 None:intergenic
CATGGTTGTTGATGTTGTTG+TGG 0.467386 1_1:-62210276 None:intergenic
TCATTGGATAATAATATCTC+TGG 0.476615 1_1:-62209951 None:intergenic
ATGGTTGTTGATGTTGTTGT+GGG 0.482724 1_1:-62210275 None:intergenic
TTTGTATAACTCATTTGAAG+TGG 0.483418 1_1:-62210146 None:intergenic
CAAAGTATGGTCATGGATGT+TGG 0.495747 1_1:+62209334 Msa0034270:CDS
TTATTCTCAATCTCAGACAA+TGG 0.501529 1_1:-62209891 None:intergenic
TTCATGCAGTACTAGGGAAT+AGG 0.501696 1_1:+62209594 Msa0034270:CDS
CAGAAGCAAGCATTAAGATA+GGG 0.504178 1_1:-62210480 None:intergenic
TCTGGTACAAAGTTCATCAA+TGG 0.513100 1_1:-62210529 None:intergenic
ATTTCATTGTCTGTCCTCCC+CGG 0.513376 1_1:-62209798 None:intergenic
GACAATGGTTTATGAGTCAC+AGG 0.514909 1_1:-62209876 None:intergenic
CTTCTCTCTCATGAGACATA+AGG 0.514936 1_1:+62209106 None:intergenic
AAAGATGTGGTAAGAGCTGC+AGG 0.517924 1_1:+62209492 Msa0034270:CDS
AGAAGCTTAGGAAAGGTCTA+TGG 0.519654 1_1:+62209274 Msa0034270:intron
GTAAGAGCTGCAGGCTTAGG+TGG 0.521603 1_1:+62209501 Msa0034270:CDS
GAGATATGTGAACATGATTG+TGG 0.523895 1_1:+62210656 Msa0034270:three_prime_UTR
CATATAACAAAGTATGGTCA+TGG 0.533584 1_1:+62209327 Msa0034270:CDS
AAAATTTCCCATCAAATCTG+AGG 0.537811 1_1:-62210123 None:intergenic
ATTCAACCCTCAGATTTGAT+GGG 0.538604 1_1:+62210116 Msa0034270:CDS
TTGAACTTCATGCAGTACTA+GGG 0.545997 1_1:+62209588 Msa0034270:CDS
TCATACAGAAGAAGCTAAGT+GGG 0.564291 1_1:+62210438 Msa0034270:three_prime_UTR
TTATCAGGTTTGCAAAGATG+TGG 0.565876 1_1:+62209479 Msa0034270:intron
TTCACCAAAAGCATATGCAA+TGG 0.574736 1_1:+62210049 Msa0034270:CDS
ATCATACAGAAGAAGCTAAG+TGG 0.575317 1_1:+62210437 Msa0034270:three_prime_UTR
TATCAGATGGTCTCAAATTG+CGG 0.579070 1_1:+62209767 Msa0034270:intron
TTGCGGCGCAATTGCCGGGG+AGG 0.583739 1_1:+62209784 Msa0034270:CDS
CTCTGTGGAAACATTGTCAG+AGG 0.587422 1_1:-62210342 None:intergenic
AAATTTCCCATCAAATCTGA+GGG 0.588053 1_1:-62210122 None:intergenic
CAAACACTAGTAGTAACCAT+TGG 0.594685 1_1:+62210198 Msa0034270:CDS
GCATATGCAATGGAAATGGA+AGG 0.607612 1_1:+62210059 Msa0034270:CDS
AAGAGGAACATTCTCACAAG+AGG 0.608650 1_1:+62209550 Msa0034270:CDS
TACAAGCAGAAGCTTAGGAA+AGG 0.614815 1_1:+62209267 Msa0034270:intron
AGTTCAGTACCTAAGCAAGC+AGG 0.631698 1_1:+62209357 Msa0034270:CDS
GGTACAAAGTTCATCAATGG+AGG 0.632864 1_1:-62210526 None:intergenic
GCTGCTAGTTCTCATCTCTG+TGG 0.644097 1_1:-62210357 None:intergenic
AAATTGCGGCGCAATTGCCG+GGG 0.649843 1_1:+62209781 Msa0034270:CDS
TGAGATTGAGAATAATGGAG+AGG 0.653412 1_1:+62209899 Msa0034270:CDS
TCTGTGGAAACATTGTCAGA+GGG 0.661164 1_1:-62210341 None:intergenic
AAAAGAATTAGGAAGAAACA+TGG 0.684494 1_1:-62210294 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTATTATATGCTAA+TGG - chr1_1:62209403-62209422 None:intergenic 10.0%
!! TTATTATTATTATATGCTAA+TGG - chr1_1:62209403-62209422 None:intergenic 10.0%
!!! GAATTTTGTTTATTATTATC+AGG + chr1_1:62209464-62209483 Msa0034270:intron 15.0%
!! ACAATGAAATAAAGAATTTA+TGG + chr1_1:62209811-62209830 Msa0034270:CDS 15.0%
!!! AACAAATTGCTTTTTTTTTT+TGG - chr1_1:62210787-62210806 None:intergenic 15.0%
!!! GAATTTTGTTTATTATTATC+AGG + chr1_1:62209464-62209483 Msa0034270:intron 15.0%
!! ACAATGAAATAAAGAATTTA+TGG + chr1_1:62209811-62209830 Msa0034270:CDS 15.0%
!!! AACAAATTGCTTTTTTTTTT+TGG - chr1_1:62210787-62210806 None:intergenic 15.0%
!! CATAGGAGAAAATAAAAAAA+AGG - chr1_1:62209643-62209662 None:intergenic 20.0%
!!! CTTTTTTTTATTTTCTCCTA+TGG + chr1_1:62209641-62209660 Msa0034270:intron 20.0%
!!! ATTGTTGTTATGTAAGTTTA+AGG - chr1_1:62210390-62210409 None:intergenic 20.0%
!!! ATAACAACAATTTTTCTTCT+TGG + chr1_1:62210399-62210418 Msa0034270:CDS 20.0%
!!! TAACAACAATTTTTCTTCTT+GGG + chr1_1:62210400-62210419 Msa0034270:CDS 20.0%
!!! AACTTCTAATATATTTTCCA+AGG + chr1_1:62210606-62210625 Msa0034270:three_prime_UTR 20.0%
!! AAATATCAACAAAGCAAAAA+GGG - chr1_1:62210820-62210839 None:intergenic 20.0%
!! ATAGAAGAAAAAAATGTAGT+TGG - chr1_1:62210848-62210867 None:intergenic 20.0%
!! CATAGGAGAAAATAAAAAAA+AGG - chr1_1:62209643-62209662 None:intergenic 20.0%
!!! CTTTTTTTTATTTTCTCCTA+TGG + chr1_1:62209641-62209660 Msa0034270:intron 20.0%
!!! ATTGTTGTTATGTAAGTTTA+AGG - chr1_1:62210390-62210409 None:intergenic 20.0%
!!! ATAACAACAATTTTTCTTCT+TGG + chr1_1:62210399-62210418 Msa0034270:CDS 20.0%
!!! TAACAACAATTTTTCTTCTT+GGG + chr1_1:62210400-62210419 Msa0034270:CDS 20.0%
!!! AACTTCTAATATATTTTCCA+AGG + chr1_1:62210606-62210625 Msa0034270:three_prime_UTR 20.0%
!! AAATATCAACAAAGCAAAAA+GGG - chr1_1:62210820-62210839 None:intergenic 20.0%
!! ATAGAAGAAAAAAATGTAGT+TGG - chr1_1:62210848-62210867 None:intergenic 20.0%
! AAAAGGAGTTGAGTTAATAT+AGG - chr1_1:62209141-62209160 None:intergenic 25.0%
! TTAAGACCTGATTTAAAAAG+AGG + chr1_1:62209533-62209552 Msa0034270:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG - chr1_1:62209542-62209561 None:intergenic 25.0%
!! TTCATTTTCTTCTTATCAGA+TGG + chr1_1:62209754-62209773 Msa0034270:intron 25.0%
! TCATTGGATAATAATATCTC+TGG - chr1_1:62209954-62209973 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG - chr1_1:62209970-62209989 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG + chr1_1:62210090-62210109 Msa0034270:CDS 25.0%
! TTTGTATAACTCATTTGAAG+TGG - chr1_1:62210149-62210168 None:intergenic 25.0%
!! TATCAAAAGATTTTCCAGTT+TGG - chr1_1:62210229-62210248 None:intergenic 25.0%
! AAAAGAATTAGGAAGAAACA+TGG - chr1_1:62210297-62210316 None:intergenic 25.0%
!!! TGTTGTTTTTTCTTTAGTAC+AGG + chr1_1:62210711-62210730 Msa0034270:three_prime_UTR 25.0%
! ATATACAAGAGAAAAATCAG+TGG - chr1_1:62210746-62210765 None:intergenic 25.0%
!! CTGATTTTTCTCTTGTATAT+AGG + chr1_1:62210746-62210765 Msa0034270:three_prime_UTR 25.0%
! CAAATATCAACAAAGCAAAA+AGG - chr1_1:62210821-62210840 None:intergenic 25.0%
!!! ATTTTTTTCTTCTATGAGTG+TGG + chr1_1:62210853-62210872 Msa0034270:three_prime_UTR 25.0%
!!! TTTTTTTCTTCTATGAGTGT+GGG + chr1_1:62210854-62210873 Msa0034270:three_prime_UTR 25.0%
! AAAAGGAGTTGAGTTAATAT+AGG - chr1_1:62209141-62209160 None:intergenic 25.0%
! TTAAGACCTGATTTAAAAAG+AGG + chr1_1:62209533-62209552 Msa0034270:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG - chr1_1:62209542-62209561 None:intergenic 25.0%
!! TTCATTTTCTTCTTATCAGA+TGG + chr1_1:62209754-62209773 Msa0034270:intron 25.0%
! TCATTGGATAATAATATCTC+TGG - chr1_1:62209954-62209973 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG - chr1_1:62209970-62209989 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG + chr1_1:62210090-62210109 Msa0034270:CDS 25.0%
! TTTGTATAACTCATTTGAAG+TGG - chr1_1:62210149-62210168 None:intergenic 25.0%
!! TATCAAAAGATTTTCCAGTT+TGG - chr1_1:62210229-62210248 None:intergenic 25.0%
! AAAAGAATTAGGAAGAAACA+TGG - chr1_1:62210297-62210316 None:intergenic 25.0%
!!! TGTTGTTTTTTCTTTAGTAC+AGG + chr1_1:62210711-62210730 Msa0034270:three_prime_UTR 25.0%
! ATATACAAGAGAAAAATCAG+TGG - chr1_1:62210746-62210765 None:intergenic 25.0%
!! CTGATTTTTCTCTTGTATAT+AGG + chr1_1:62210746-62210765 Msa0034270:three_prime_UTR 25.0%
! CAAATATCAACAAAGCAAAA+AGG - chr1_1:62210821-62210840 None:intergenic 25.0%
!!! ATTTTTTTCTTCTATGAGTG+TGG + chr1_1:62210853-62210872 Msa0034270:three_prime_UTR 25.0%
!!! TTTTTTTCTTCTATGAGTGT+GGG + chr1_1:62210854-62210873 Msa0034270:three_prime_UTR 25.0%
TTAGTGATAGAGAGAATTGA+AGG - chr1_1:62209188-62209207 None:intergenic 30.0%
TGAGAAGAAAAATGAAGCAA+TGG - chr1_1:62209212-62209231 None:intergenic 30.0%
!! TGCTTCATTTTTCTTCTCAT+AGG + chr1_1:62209213-62209232 Msa0034270:intron 30.0%
CTCATAGGAAAATTCACAAA+TGG + chr1_1:62209228-62209247 Msa0034270:intron 30.0%
TAGGAAAATTCACAAATGGA+AGG + chr1_1:62209232-62209251 Msa0034270:intron 30.0%
! AGTAGTTTTTCATCTTCTTC+TGG - chr1_1:62209303-62209322 None:intergenic 30.0%
AAGAAGATGAAAAACTACTG+AGG + chr1_1:62209304-62209323 Msa0034270:CDS 30.0%
CATATAACAAAGTATGGTCA+TGG + chr1_1:62209327-62209346 Msa0034270:CDS 30.0%
TTATTCTCAATCTCAGACAA+TGG - chr1_1:62209894-62209913 None:intergenic 30.0%
! TTGTCTGAGATTGAGAATAA+TGG + chr1_1:62209894-62209913 Msa0034270:CDS 30.0%
TTGAACTCTCTGATTTCAAA+AGG - chr1_1:62209983-62210002 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG - chr1_1:62210056-62210075 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG + chr1_1:62210055-62210074 Msa0034270:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG - chr1_1:62210125-62210144 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG - chr1_1:62210126-62210145 None:intergenic 30.0%
CTACTAGTGTTTGAATCATT+TGG - chr1_1:62210191-62210210 None:intergenic 30.0%
TTGTTGCAGCAAAAAGAATT+AGG - chr1_1:62210308-62210327 None:intergenic 30.0%
! AACTTTGTACCAGATAGTTT+TGG + chr1_1:62210538-62210557 Msa0034270:three_prime_UTR 30.0%
AAAATAGCTCCAAAACTATC+TGG - chr1_1:62210550-62210569 None:intergenic 30.0%
!! AACAGTGTGAAGATTTTTAG+AGG + chr1_1:62210688-62210707 Msa0034270:three_prime_UTR 30.0%
!!! TTTTTTCTTCTATGAGTGTG+GGG + chr1_1:62210855-62210874 Msa0034270:three_prime_UTR 30.0%
TTAGTGATAGAGAGAATTGA+AGG - chr1_1:62209188-62209207 None:intergenic 30.0%
TGAGAAGAAAAATGAAGCAA+TGG - chr1_1:62209212-62209231 None:intergenic 30.0%
!! TGCTTCATTTTTCTTCTCAT+AGG + chr1_1:62209213-62209232 Msa0034270:intron 30.0%
CTCATAGGAAAATTCACAAA+TGG + chr1_1:62209228-62209247 Msa0034270:intron 30.0%
TAGGAAAATTCACAAATGGA+AGG + chr1_1:62209232-62209251 Msa0034270:intron 30.0%
! AGTAGTTTTTCATCTTCTTC+TGG - chr1_1:62209303-62209322 None:intergenic 30.0%
AAGAAGATGAAAAACTACTG+AGG + chr1_1:62209304-62209323 Msa0034270:CDS 30.0%
CATATAACAAAGTATGGTCA+TGG + chr1_1:62209327-62209346 Msa0034270:CDS 30.0%
TTATTCTCAATCTCAGACAA+TGG - chr1_1:62209894-62209913 None:intergenic 30.0%
! TTGTCTGAGATTGAGAATAA+TGG + chr1_1:62209894-62209913 Msa0034270:CDS 30.0%
TTGAACTCTCTGATTTCAAA+AGG - chr1_1:62209983-62210002 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG - chr1_1:62210056-62210075 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG + chr1_1:62210055-62210074 Msa0034270:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG - chr1_1:62210125-62210144 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG - chr1_1:62210126-62210145 None:intergenic 30.0%
CTACTAGTGTTTGAATCATT+TGG - chr1_1:62210191-62210210 None:intergenic 30.0%
TTGTTGCAGCAAAAAGAATT+AGG - chr1_1:62210308-62210327 None:intergenic 30.0%
! AACTTTGTACCAGATAGTTT+TGG + chr1_1:62210538-62210557 Msa0034270:three_prime_UTR 30.0%
AAAATAGCTCCAAAACTATC+TGG - chr1_1:62210550-62210569 None:intergenic 30.0%
!! AACAGTGTGAAGATTTTTAG+AGG + chr1_1:62210688-62210707 Msa0034270:three_prime_UTR 30.0%
!!! TTTTTTCTTCTATGAGTGTG+GGG + chr1_1:62210855-62210874 Msa0034270:three_prime_UTR 30.0%
TGATAGAGAGAATTGAAGGA+AGG - chr1_1:62209184-62209203 None:intergenic 35.0%
CTGAGGCATATAACAAAGTA+TGG + chr1_1:62209321-62209340 Msa0034270:CDS 35.0%
GATAATTTACCTGCTTGCTT+AGG - chr1_1:62209369-62209388 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG + chr1_1:62209479-62209498 Msa0034270:intron 35.0%
TTGAACTTCATGCAGTACTA+GGG + chr1_1:62209588-62209607 Msa0034270:CDS 35.0%
TATCACTCTTGCTTAACCAT+AGG - chr1_1:62209660-62209679 None:intergenic 35.0%
ATGGTTAAGCAAGAGTGATA+AGG + chr1_1:62209660-62209679 Msa0034270:intron 35.0%
TATCAGATGGTCTCAAATTG+CGG + chr1_1:62209767-62209786 Msa0034270:intron 35.0%
AAGAAGAGACTGAGACAAAA+AGG + chr1_1:62209846-62209865 Msa0034270:CDS 35.0%
! TGAGATTGAGAATAATGGAG+AGG + chr1_1:62209899-62209918 Msa0034270:CDS 35.0%
! GAGAATAATGGAGAGGAAAA+TGG + chr1_1:62209906-62209925 Msa0034270:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG + chr1_1:62210049-62210068 Msa0034270:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG + chr1_1:62210116-62210135 Msa0034270:CDS 35.0%
CAAACACTAGTAGTAACCAT+TGG + chr1_1:62210198-62210217 Msa0034270:CDS 35.0%
ATGGTTGTTGATGTTGTTGT+GGG - chr1_1:62210278-62210297 None:intergenic 35.0%
! CAACAATTTTTCTTCTTGGG+AGG + chr1_1:62210403-62210422 Msa0034270:CDS 35.0%
TTTCTTCTTGGGAGGATTAA+TGG + chr1_1:62210411-62210430 Msa0034270:CDS 35.0%
ATCATACAGAAGAAGCTAAG+TGG + chr1_1:62210437-62210456 Msa0034270:three_prime_UTR 35.0%
TCATACAGAAGAAGCTAAGT+GGG + chr1_1:62210438-62210457 Msa0034270:three_prime_UTR 35.0%
CAGAAGCAAGCATTAAGATA+GGG - chr1_1:62210483-62210502 None:intergenic 35.0%
TCAGAAGCAAGCATTAAGAT+AGG - chr1_1:62210484-62210503 None:intergenic 35.0%
TCTGGTACAAAGTTCATCAA+TGG - chr1_1:62210532-62210551 None:intergenic 35.0%
TCTTGTTCTTGCTTTGTATG+AGG - chr1_1:62210574-62210593 None:intergenic 35.0%
GAGATATGTGAACATGATTG+TGG + chr1_1:62210656-62210675 Msa0034270:three_prime_UTR 35.0%
TGATAGAGAGAATTGAAGGA+AGG - chr1_1:62209184-62209203 None:intergenic 35.0%
CTGAGGCATATAACAAAGTA+TGG + chr1_1:62209321-62209340 Msa0034270:CDS 35.0%
GATAATTTACCTGCTTGCTT+AGG - chr1_1:62209369-62209388 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG + chr1_1:62209479-62209498 Msa0034270:intron 35.0%
TTGAACTTCATGCAGTACTA+GGG + chr1_1:62209588-62209607 Msa0034270:CDS 35.0%
TATCACTCTTGCTTAACCAT+AGG - chr1_1:62209660-62209679 None:intergenic 35.0%
ATGGTTAAGCAAGAGTGATA+AGG + chr1_1:62209660-62209679 Msa0034270:intron 35.0%
TATCAGATGGTCTCAAATTG+CGG + chr1_1:62209767-62209786 Msa0034270:intron 35.0%
AAGAAGAGACTGAGACAAAA+AGG + chr1_1:62209846-62209865 Msa0034270:CDS 35.0%
! TGAGATTGAGAATAATGGAG+AGG + chr1_1:62209899-62209918 Msa0034270:CDS 35.0%
! GAGAATAATGGAGAGGAAAA+TGG + chr1_1:62209906-62209925 Msa0034270:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG + chr1_1:62210049-62210068 Msa0034270:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG + chr1_1:62210116-62210135 Msa0034270:CDS 35.0%
CAAACACTAGTAGTAACCAT+TGG + chr1_1:62210198-62210217 Msa0034270:CDS 35.0%
ATGGTTGTTGATGTTGTTGT+GGG - chr1_1:62210278-62210297 None:intergenic 35.0%
! CAACAATTTTTCTTCTTGGG+AGG + chr1_1:62210403-62210422 Msa0034270:CDS 35.0%
TTTCTTCTTGGGAGGATTAA+TGG + chr1_1:62210411-62210430 Msa0034270:CDS 35.0%
ATCATACAGAAGAAGCTAAG+TGG + chr1_1:62210437-62210456 Msa0034270:three_prime_UTR 35.0%
TCATACAGAAGAAGCTAAGT+GGG + chr1_1:62210438-62210457 Msa0034270:three_prime_UTR 35.0%
CAGAAGCAAGCATTAAGATA+GGG - chr1_1:62210483-62210502 None:intergenic 35.0%
TCAGAAGCAAGCATTAAGAT+AGG - chr1_1:62210484-62210503 None:intergenic 35.0%
TCTGGTACAAAGTTCATCAA+TGG - chr1_1:62210532-62210551 None:intergenic 35.0%
TCTTGTTCTTGCTTTGTATG+AGG - chr1_1:62210574-62210593 None:intergenic 35.0%
GAGATATGTGAACATGATTG+TGG + chr1_1:62210656-62210675 Msa0034270:three_prime_UTR 35.0%
TTGAAGGAAGGAAAGTGAAG+TGG - chr1_1:62209172-62209191 None:intergenic 40.0%
GTTGTTACAAGCAGAAGCTT+AGG + chr1_1:62209262-62209281 Msa0034270:intron 40.0%
TACAAGCAGAAGCTTAGGAA+AGG + chr1_1:62209267-62209286 Msa0034270:intron 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG + chr1_1:62209274-62209293 Msa0034270:intron 40.0%
CAAAGTATGGTCATGGATGT+TGG + chr1_1:62209334-62209353 Msa0034270:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG + chr1_1:62209550-62209569 Msa0034270:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG + chr1_1:62209587-62209606 Msa0034270:CDS 40.0%
TTCATGCAGTACTAGGGAAT+AGG + chr1_1:62209594-62209613 Msa0034270:CDS 40.0%
GTTAAGCAAGAGTGATAAGG+AGG + chr1_1:62209663-62209682 Msa0034270:intron 40.0%
GACAATGGTTTATGAGTCAC+AGG - chr1_1:62209879-62209898 None:intergenic 40.0%
GCATATGCAATGGAAATGGA+AGG + chr1_1:62210059-62210078 Msa0034270:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG + chr1_1:62210115-62210134 Msa0034270:CDS 40.0%
!! AACCATTGGTTCAACCAAAC+TGG + chr1_1:62210212-62210231 Msa0034270:CDS 40.0%
TTCCAGTTTGGTTGAACCAA+TGG - chr1_1:62210217-62210236 None:intergenic 40.0%
CATGGTTGTTGATGTTGTTG+TGG - chr1_1:62210279-62210298 None:intergenic 40.0%
TCTGTGGAAACATTGTCAGA+GGG - chr1_1:62210344-62210363 None:intergenic 40.0%
GGTACAAAGTTCATCAATGG+AGG - chr1_1:62210529-62210548 None:intergenic 40.0%
TCTGAGTTTCTGAATGTCCT+TGG - chr1_1:62210626-62210645 None:intergenic 40.0%
! CAGAAACTCAGAGAAGCTTT+TGG + chr1_1:62210634-62210653 Msa0034270:three_prime_UTR 40.0%
TGGGGTAGAATTGGTGAATA+AGG + chr1_1:62210873-62210892 Msa0034270:three_prime_UTR 40.0%
TTGAAGGAAGGAAAGTGAAG+TGG - chr1_1:62209172-62209191 None:intergenic 40.0%
GTTGTTACAAGCAGAAGCTT+AGG + chr1_1:62209262-62209281 Msa0034270:intron 40.0%
TACAAGCAGAAGCTTAGGAA+AGG + chr1_1:62209267-62209286 Msa0034270:intron 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG + chr1_1:62209274-62209293 Msa0034270:intron 40.0%
CAAAGTATGGTCATGGATGT+TGG + chr1_1:62209334-62209353 Msa0034270:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG + chr1_1:62209550-62209569 Msa0034270:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG + chr1_1:62209587-62209606 Msa0034270:CDS 40.0%
TTCATGCAGTACTAGGGAAT+AGG + chr1_1:62209594-62209613 Msa0034270:CDS 40.0%
GTTAAGCAAGAGTGATAAGG+AGG + chr1_1:62209663-62209682 Msa0034270:intron 40.0%
GACAATGGTTTATGAGTCAC+AGG - chr1_1:62209879-62209898 None:intergenic 40.0%
GCATATGCAATGGAAATGGA+AGG + chr1_1:62210059-62210078 Msa0034270:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG + chr1_1:62210115-62210134 Msa0034270:CDS 40.0%
!! AACCATTGGTTCAACCAAAC+TGG + chr1_1:62210212-62210231 Msa0034270:CDS 40.0%
TTCCAGTTTGGTTGAACCAA+TGG - chr1_1:62210217-62210236 None:intergenic 40.0%
CATGGTTGTTGATGTTGTTG+TGG - chr1_1:62210279-62210298 None:intergenic 40.0%
TCTGTGGAAACATTGTCAGA+GGG - chr1_1:62210344-62210363 None:intergenic 40.0%
GGTACAAAGTTCATCAATGG+AGG - chr1_1:62210529-62210548 None:intergenic 40.0%
TCTGAGTTTCTGAATGTCCT+TGG - chr1_1:62210626-62210645 None:intergenic 40.0%
! CAGAAACTCAGAGAAGCTTT+TGG + chr1_1:62210634-62210653 Msa0034270:three_prime_UTR 40.0%
TGGGGTAGAATTGGTGAATA+AGG + chr1_1:62210873-62210892 Msa0034270:three_prime_UTR 40.0%
GTGAAGTGGCAGCTAAGAAA+AGG - chr1_1:62209158-62209177 None:intergenic 45.0%
AGTTCAGTACCTAAGCAAGC+AGG + chr1_1:62209357-62209376 Msa0034270:CDS 45.0%
AAAGATGTGGTAAGAGCTGC+AGG + chr1_1:62209492-62209511 Msa0034270:CDS 45.0%
AAGAGTGATAAGGAGGTCGA+GGG + chr1_1:62209670-62209689 Msa0034270:intron 45.0%
ATTTCATTGTCTGTCCTCCC+CGG - chr1_1:62209801-62209820 None:intergenic 45.0%
CTCTGTGGAAACATTGTCAG+AGG - chr1_1:62210345-62210364 None:intergenic 45.0%
CTATGAGTGTGGGGTAGAAT+TGG + chr1_1:62210864-62210883 Msa0034270:three_prime_UTR 45.0%
GTGAAGTGGCAGCTAAGAAA+AGG - chr1_1:62209158-62209177 None:intergenic 45.0%
AGTTCAGTACCTAAGCAAGC+AGG + chr1_1:62209357-62209376 Msa0034270:CDS 45.0%
AAAGATGTGGTAAGAGCTGC+AGG + chr1_1:62209492-62209511 Msa0034270:CDS 45.0%
AAGAGTGATAAGGAGGTCGA+GGG + chr1_1:62209670-62209689 Msa0034270:intron 45.0%
ATTTCATTGTCTGTCCTCCC+CGG - chr1_1:62209801-62209820 None:intergenic 45.0%
CTCTGTGGAAACATTGTCAG+AGG - chr1_1:62210345-62210364 None:intergenic 45.0%
CTATGAGTGTGGGGTAGAAT+TGG + chr1_1:62210864-62210883 Msa0034270:three_prime_UTR 45.0%
CAAGAGTGATAAGGAGGTCG+AGG + chr1_1:62209669-62209688 Msa0034270:intron 50.0%
TCAAATTGCGGCGCAATTGC+CGG + chr1_1:62209779-62209798 Msa0034270:CDS 50.0%
! GCTGCTAGTTCTCATCTCTG+TGG - chr1_1:62210360-62210379 None:intergenic 50.0%
CAAGAGTGATAAGGAGGTCG+AGG + chr1_1:62209669-62209688 Msa0034270:intron 50.0%
TCAAATTGCGGCGCAATTGC+CGG + chr1_1:62209779-62209798 Msa0034270:CDS 50.0%
! GCTGCTAGTTCTCATCTCTG+TGG - chr1_1:62210360-62210379 None:intergenic 50.0%
GTGGTAAGAGCTGCAGGCTT+AGG + chr1_1:62209498-62209517 Msa0034270:CDS 55.0%
GTAAGAGCTGCAGGCTTAGG+TGG + chr1_1:62209501-62209520 Msa0034270:CDS 55.0%
CAAATTGCGGCGCAATTGCC+GGG + chr1_1:62209780-62209799 Msa0034270:CDS 55.0%
AAATTGCGGCGCAATTGCCG+GGG + chr1_1:62209781-62209800 Msa0034270:CDS 55.0%
GTGGTAAGAGCTGCAGGCTT+AGG + chr1_1:62209498-62209517 Msa0034270:CDS 55.0%
GTAAGAGCTGCAGGCTTAGG+TGG + chr1_1:62209501-62209520 Msa0034270:CDS 55.0%
CAAATTGCGGCGCAATTGCC+GGG + chr1_1:62209780-62209799 Msa0034270:CDS 55.0%
AAATTGCGGCGCAATTGCCG+GGG + chr1_1:62209781-62209800 Msa0034270:CDS 55.0%
CGAGGGCTCGATCTCACTCT+CGG + chr1_1:62209687-62209706 Msa0034270:intron 60.0%
CGAGGGCTCGATCTCACTCT+CGG + chr1_1:62209687-62209706 Msa0034270:intron 60.0%
TTGCGGCGCAATTGCCGGGG+AGG + chr1_1:62209784-62209803 Msa0034270:CDS 70.0%
TTGCGGCGCAATTGCCGGGG+AGG + chr1_1:62209784-62209803 Msa0034270:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62209116 62210940 62209116 ID=Msa0034270;Name=Msa0034270
chr1_1 mRNA 62209116 62210940 62209116 ID=Msa0034270-mRNA-1;Parent=Msa0034270;Name=Msa0034270-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.66|0.5|1|1|1|4|510|300
chr1_1 exon 62209116 62209127 62209116 ID=Msa0034270-mRNA-1:exon:19599;Parent=Msa0034270-mRNA-1
chr1_1 exon 62209276 62209378 62209276 ID=Msa0034270-mRNA-1:exon:19600;Parent=Msa0034270-mRNA-1
chr1_1 exon 62209486 62209615 62209486 ID=Msa0034270-mRNA-1:exon:19601;Parent=Msa0034270-mRNA-1
chr1_1 exon 62209773 62210940 62209773 ID=Msa0034270-mRNA-1:exon:19602;Parent=Msa0034270-mRNA-1
chr1_1 CDS 62209116 62209127 62209116 ID=Msa0034270-mRNA-1:cds;Parent=Msa0034270-mRNA-1
chr1_1 CDS 62209276 62209378 62209276 ID=Msa0034270-mRNA-1:cds;Parent=Msa0034270-mRNA-1
chr1_1 CDS 62209486 62209615 62209486 ID=Msa0034270-mRNA-1:cds;Parent=Msa0034270-mRNA-1
chr1_1 CDS 62209773 62210430 62209773 ID=Msa0034270-mRNA-1:cds;Parent=Msa0034270-mRNA-1
chr1_1 three_prime_UTR 62210431 62210940 62210431 ID=Msa0034270-mRNA-1:three_prime_utr;Parent=Msa0034270-mRNA-1
Gene Sequence

>Msa0034270

ATGAGACATAAGAAGCTTAGGAAAGGTCTATGGTCACCAGAAGAAGATGAAAAACTACTGAGGCATATAACAAAGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTTTGCAAAGATGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCTCATTGTTGAACTTCATGCAGTACTAGGGAATAGATGGTCTCAAATTGCGGCGCAATTGCCGGGGAGGACAGACAATGAAATAAAGAATTTATGGAACTCTTGTTTGAAGAAGAGACTGAGACAAAAAGGTATAGATCCTGTGACTCATAAACCATTGTCTGAGATTGAGAATAATGGAGAGGAAAATGGTAATAAGAGTCAAGAGAAAGCACCAGAGATATTATTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAGAGAACAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGGTTCATTCAACCCTCAGATTTGATGGGAAATTTTCCACTTCAAATGAGTTATACAAACACTGAAAATGATTGTTTACCAAATGATTCAAACACTAGTAGTAACCATTGGTTCAACCAAACTGGAAAATCTTTTGATATGAATACTGATCAGTTTCATTTCAATCCCACAACAACATCAACAACCATGTTTCTTCCTAATTCTTTTTGCTGCAACAATTCTCTTGATATTCCCTCTGACAATGTTTCCACAGAGATGAGAACTAGCAGCAGCAACACCTTAAACTTACATAACAACAATTTTTCTTCTTGGGAGGATTAA
Protein sequence

>Msa0034270

MRHKKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQKGIDPVTHKPLSEIENNGEENGNKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTTSSISPKAYAMEMEGSCNKEFFIDRFIQPSDLMGNFPLQMSYTNTENDCLPNDSNTSSNHWFNQTGKSFDMNTDQFHFNPTTTSTTMFLPNSFCCNNSLDIPSDNVSTEMRTSSSNTLNLHNNNFSSWED*