Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260610 | XP_003597798.2 | 91.041 | 413 | 33 | 3 | 1 | 412 | 1 | 410 | 0.0 | 719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260610 | sp|Q5KQI4|Y5814_ORYSJ | 45.522 | 268 | 134 | 6 | 16 | 280 | 18 | 276 | 1.09e-65 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260610 | G7IMD4 | 91.041 | 413 | 33 | 3 | 1 | 412 | 1 | 410 | 0.0 | 719 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0260610 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007480 | Msa0260610 | 0.800848 | 1.188728e-48 | -8.615850e-47 |
| Msa0012080 | Msa0260610 | 0.814205 | 1.734912e-51 | -8.615850e-47 |
| Msa0016670 | Msa0260610 | 0.803155 | 3.989021e-49 | -8.615850e-47 |
| Msa0017510 | Msa0260610 | 0.848666 | 5.301176e-60 | -8.615850e-47 |
| Msa0028420 | Msa0260610 | 0.831005 | 2.133298e-55 | -8.615850e-47 |
| Msa0028640 | Msa0260610 | 0.853087 | 3.012797e-61 | -8.615850e-47 |
| Msa0029270 | Msa0260610 | 0.811972 | 5.357532e-51 | -8.615850e-47 |
| Msa0032090 | Msa0260610 | 0.803374 | 3.594673e-49 | -8.615850e-47 |
| Msa0032430 | Msa0260610 | 0.830993 | 2.146890e-55 | -8.615850e-47 |
| Msa0034270 | Msa0260610 | 0.827215 | 1.769210e-54 | -8.615850e-47 |
| Msa0061290 | Msa0260610 | 0.812276 | 4.600125e-51 | -8.615850e-47 |
| Msa0061380 | Msa0260610 | 0.809574 | 1.769159e-50 | -8.615850e-47 |
| Msa0074240 | Msa0260610 | 0.806137 | 9.521269e-50 | -8.615850e-47 |
| Msa0075220 | Msa0260610 | 0.813647 | 2.303075e-51 | -8.615850e-47 |
| Msa0076250 | Msa0260610 | 0.828239 | 1.004069e-54 | -8.615850e-47 |
| Msa0079380 | Msa0260610 | 0.817689 | 2.894976e-52 | -8.615850e-47 |
| Msa0089630 | Msa0260610 | 0.819518 | 1.113659e-52 | -8.615850e-47 |
| Msa0090590 | Msa0260610 | 0.802673 | 5.018539e-49 | -8.615850e-47 |
| Msa0094120 | Msa0260610 | 0.820212 | 7.729634e-53 | -8.615850e-47 |
| Msa0094130 | Msa0260610 | 0.803395 | 3.558673e-49 | -8.615850e-47 |
| Msa0094140 | Msa0260610 | 0.967688 | 1.268358e-127 | -8.615850e-47 |
| Msa0110970 | Msa0260610 | 0.851345 | 9.428735e-61 | -8.615850e-47 |
| Msa0115080 | Msa0260610 | 0.802978 | 4.340656e-49 | -8.615850e-47 |
| Msa0118570 | Msa0260610 | 0.803347 | 3.640254e-49 | -8.615850e-47 |
| Msa0124060 | Msa0260610 | 0.814169 | 1.766544e-51 | -8.615850e-47 |
| Msa0124280 | Msa0260610 | 0.824522 | 7.713659e-54 | -8.615850e-47 |
| Msa0124340 | Msa0260610 | 0.807801 | 4.232067e-50 | -8.615850e-47 |
| Msa0127050 | Msa0260610 | 0.810482 | 1.127623e-50 | -8.615850e-47 |
| Msa0146260 | Msa0260610 | 0.814793 | 1.285705e-51 | -8.615850e-47 |
| Msa0152430 | Msa0260610 | 0.805809 | 1.115828e-49 | -8.615850e-47 |
| Msa0157290 | Msa0260610 | 0.849036 | 4.184208e-60 | -8.615850e-47 |
| Msa0167520 | Msa0260610 | 0.807576 | 4.726080e-50 | -8.615850e-47 |
| Msa0168500 | Msa0260610 | 0.825979 | 3.488429e-54 | -8.615850e-47 |
| Msa0169310 | Msa0260610 | 0.800949 | 1.133570e-48 | -8.615850e-47 |
| Msa0172070 | Msa0260610 | 0.828142 | 1.059586e-54 | -8.615850e-47 |
| Msa0173660 | Msa0260610 | 0.810620 | 1.052974e-50 | -8.615850e-47 |
| Msa0192540 | Msa0260610 | 0.818623 | 1.779364e-52 | -8.615850e-47 |
| Msa0197420 | Msa0260610 | 0.801264 | 9.774805e-49 | -8.615850e-47 |
| Msa0202950 | Msa0260610 | 0.804759 | 1.851485e-49 | -8.615850e-47 |
| Msa0203030 | Msa0260610 | 0.806977 | 6.329118e-50 | -8.615850e-47 |
| Msa0216910 | Msa0260610 | 0.807480 | 4.951833e-50 | -8.615850e-47 |
| Msa0223690 | Msa0260610 | 0.820915 | 5.328961e-53 | -8.615850e-47 |
| Msa0225680 | Msa0260610 | 0.800362 | 1.493521e-48 | -8.615850e-47 |
| Msa0225740 | Msa0260610 | 0.822757 | 1.996793e-53 | -8.615850e-47 |
| Msa0225750 | Msa0260610 | 0.808595 | 2.866998e-50 | -8.615850e-47 |
| Msa0225760 | Msa0260610 | 0.968019 | 4.382197e-128 | -8.615850e-47 |
| Msa0230740 | Msa0260610 | 0.801142 | 1.035054e-48 | -8.615850e-47 |
| Msa0239190 | Msa0260610 | 0.819090 | 1.393617e-52 | -8.615850e-47 |
| Msa0243100 | Msa0260610 | 0.821678 | 3.553894e-53 | -8.615850e-47 |
| Msa0244860 | Msa0260610 | 0.818824 | 1.601836e-52 | -8.615850e-47 |
| Msa0248970 | Msa0260610 | 0.806875 | 6.651340e-50 | -8.615850e-47 |
| Msa0255090 | Msa0260610 | 0.804033 | 2.622488e-49 | -8.615850e-47 |
| Msa0259380 | Msa0260610 | 0.806548 | 7.796543e-50 | -8.615850e-47 |
| Msa0260610 | Msa0260670 | 0.993589 | 8.502766e-201 | -8.615850e-47 |
| Msa0260610 | Msa0261340 | 0.847547 | 1.079668e-59 | -8.615850e-47 |
| Msa0260610 | Msa0264870 | 0.824463 | 7.961976e-54 | -8.615850e-47 |
| Msa0260610 | Msa0277180 | 0.832958 | 7.023780e-56 | -8.615850e-47 |
| Msa0260610 | Msa0283450 | 0.826546 | 2.556967e-54 | -8.615850e-47 |
| Msa0260610 | Msa0283520 | 0.832795 | 7.710323e-56 | -8.615850e-47 |
| Msa0260610 | Msa0284420 | 0.812158 | 4.880028e-51 | -8.615850e-47 |
| Msa0260610 | Msa0292400 | 0.854495 | 1.185078e-61 | -8.615850e-47 |
| Msa0260610 | Msa0300690 | 0.814929 | 1.199548e-51 | -8.615850e-47 |
| Msa0260610 | Msa0302000 | 0.807597 | 4.676347e-50 | -8.615850e-47 |
| Msa0260610 | Msa0316810 | 0.836159 | 1.101776e-56 | -8.615850e-47 |
| Msa0260610 | Msa0332000 | 0.840606 | 7.860110e-58 | -8.615850e-47 |
| Msa0260610 | Msa0337620 | 0.810682 | 1.020908e-50 | -8.615850e-47 |
| Msa0260610 | Msa0363070 | 0.836065 | 1.164113e-56 | -8.615850e-47 |
| Msa0260610 | Msa0363200 | 0.837799 | 4.199432e-57 | -8.615850e-47 |
| Msa0260610 | Msa0366240 | 0.821335 | 4.265399e-53 | -8.615850e-47 |
| Msa0260610 | Msa0369170 | 0.803358 | 3.621869e-49 | -8.615850e-47 |
| Msa0260610 | Msa0371110 | 0.801072 | 1.069882e-48 | -8.615850e-47 |
| Msa0260610 | Msa0376350 | 0.804157 | 2.472118e-49 | -8.615850e-47 |
| Msa0260610 | Msa0392510 | 0.816186 | 6.296649e-52 | -8.615850e-47 |
| Msa0260610 | Msa0402650 | 0.813822 | 2.107206e-51 | -8.615850e-47 |
| Msa0260610 | Msa0410500 | 0.809900 | 1.505566e-50 | -8.615850e-47 |
| Msa0260610 | Msa0410650 | 0.811862 | 5.661504e-51 | -8.615850e-47 |
| Msa0260610 | Msa0417270 | 0.803100 | 4.095410e-49 | -8.615850e-47 |
| Msa0260610 | Msa0417880 | 0.852915 | 3.373170e-61 | -8.615850e-47 |
| Msa0260610 | Msa0419820 | 0.812751 | 3.620603e-51 | -8.615850e-47 |
| Msa0260610 | Msa0422850 | 0.805498 | 1.296738e-49 | -8.615850e-47 |
| Msa0260610 | Msa0422930 | 0.807294 | 5.422659e-50 | -8.615850e-47 |
| Msa0260610 | Msa0424790 | 0.810106 | 1.359003e-50 | -8.615850e-47 |
| Msa0260610 | Msa0428150 | 0.803824 | 2.898649e-49 | -8.615850e-47 |
| Msa0260610 | Msa0462500 | 0.803844 | 2.870847e-49 | -8.615850e-47 |
| Msa0260610 | Msa0464680 | 0.800660 | 1.298314e-48 | -8.615850e-47 |
| Msa0260610 | Msa0467300 | 0.818202 | 2.217041e-52 | -8.615850e-47 |
| Msa0260610 | Msa0467490 | 0.820727 | 5.886805e-53 | -8.615850e-47 |
| Msa0260610 | Msa0468290 | 0.810169 | 1.317191e-50 | -8.615850e-47 |
| Msa0260610 | Msa0475790 | 0.802207 | 6.259969e-49 | -8.615850e-47 |
| Msa0260610 | Msa0498060 | 0.824446 | 8.037629e-54 | -8.615850e-47 |
| Msa0260610 | Msa0507680 | 0.810111 | 1.355610e-50 | -8.615850e-47 |
| Msa0260610 | Msa0509610 | 0.812482 | 4.147231e-51 | -8.615850e-47 |
| Msa0260610 | Msa0510980 | 0.803668 | 3.122880e-49 | -8.615850e-47 |
| Msa0260610 | Msa0511270 | 0.803814 | 2.912650e-49 | -8.615850e-47 |
| Msa0260610 | Msa0524190 | 0.826580 | 2.509942e-54 | -8.615850e-47 |
| Msa0260610 | Msa0532070 | 0.801284 | 9.682605e-49 | -8.615850e-47 |
| Msa0260610 | Msa0535040 | 0.806525 | 7.884646e-50 | -8.615850e-47 |
| Msa0260610 | Msa0546680 | 0.833980 | 3.904160e-56 | -8.615850e-47 |
| Msa0260610 | Msa0557070 | 0.800569 | 1.355589e-48 | -8.615850e-47 |
| Msa0260610 | Msa0569200 | 0.842761 | 2.122334e-58 | -8.615850e-47 |
| Msa0260610 | Msa0574890 | 0.803110 | 4.076536e-49 | -8.615850e-47 |
| Msa0260610 | Msa0594310 | 0.810598 | 1.064577e-50 | -8.615850e-47 |
| Msa0260610 | Msa0615590 | 0.801924 | 7.155218e-49 | -8.615850e-47 |
| Msa0260610 | Msa0616220 | 0.852693 | 3.904683e-61 | -8.615850e-47 |
| Msa0260610 | Msa0625720 | 0.804372 | 2.229581e-49 | -8.615850e-47 |
| Msa0260610 | Msa0639430 | 0.814072 | 1.856216e-51 | -8.615850e-47 |
| Msa0260610 | Msa0647130 | 0.809739 | 1.630334e-50 | -8.615850e-47 |
| Msa0260610 | Msa0649940 | 0.807963 | 3.909543e-50 | -8.615850e-47 |
| Msa0260610 | Msa0650020 | 0.859178 | 4.949014e-63 | -8.615850e-47 |
| Msa0260610 | Msa0657970 | 0.802058 | 6.715661e-49 | -8.615850e-47 |
| Msa0260610 | Msa0661790 | 0.800605 | 1.332878e-48 | -8.615850e-47 |
| Msa0260610 | Msa0677410 | 0.834162 | 3.515125e-56 | -8.615850e-47 |
| Msa0260610 | Msa0682330 | 0.820582 | 6.355878e-53 | -8.615850e-47 |
| Msa0260610 | Msa0683510 | 0.810284 | 1.244259e-50 | -8.615850e-47 |
| Msa0260610 | Msa0683570 | 0.827342 | 1.649295e-54 | -8.615850e-47 |
| Msa0260610 | Msa0689520 | 0.804784 | 1.829402e-49 | -8.615850e-47 |
| Msa0260610 | Msa0691980 | 0.865695 | 4.898959e-65 | -8.615850e-47 |
| Msa0260610 | Msa0699550 | 0.838334 | 3.058773e-57 | -8.615850e-47 |
| Msa0260610 | Msa0704600 | 0.814365 | 1.599252e-51 | -8.615850e-47 |
| Msa0260610 | Msa0741240 | 0.816870 | 4.425229e-52 | -8.615850e-47 |
| Msa0260610 | Msa0754520 | 0.831047 | 2.082716e-55 | -8.615850e-47 |
| Msa0260610 | Msa0770720 | 0.828390 | 9.235410e-55 | -8.615850e-47 |
| Msa0260610 | Msa0813740 | 0.804985 | 1.660933e-49 | -8.615850e-47 |
| Msa0260610 | Msa0828560 | 0.846286 | 2.388696e-59 | -8.615850e-47 |
| Msa0260610 | Msa0833220 | 0.828645 | 8.011272e-55 | -8.615850e-47 |
| Msa0260610 | Msa0850960 | 0.805466 | 1.316686e-49 | -8.615850e-47 |
| Msa0260610 | Msa0856920 | 0.803909 | 2.783971e-49 | -8.615850e-47 |
| Msa0260610 | Msa0861510 | 0.808846 | 2.534329e-50 | -8.615850e-47 |
| Msa0260610 | Msa0861600 | 0.812671 | 3.770916e-51 | -8.615850e-47 |
| Msa0260610 | Msa0861870 | 0.818478 | 1.920071e-52 | -8.615850e-47 |
| Msa0260610 | Msa0870640 | 0.811538 | 6.660492e-51 | -8.615850e-47 |
| Msa0260610 | Msa0871270 | 0.812115 | 4.985634e-51 | -8.615850e-47 |
| Msa0260610 | Msa0880140 | 0.844688 | 6.476151e-59 | -8.615850e-47 |
| Msa0260610 | Msa0896540 | 0.824233 | 9.017020e-54 | -8.615850e-47 |
| Msa0260610 | Msa0906200 | 0.803725 | 3.040131e-49 | -8.615850e-47 |
| Msa0260610 | Msa0909230 | 0.805748 | 1.149221e-49 | -8.615850e-47 |
| Msa0260610 | Msa0925180 | 0.820472 | 6.736776e-53 | -8.615850e-47 |
| Msa0260610 | Msa0935710 | 0.807763 | 4.311837e-50 | -8.615850e-47 |
| Msa0260610 | Msa0938220 | 0.808530 | 2.959528e-50 | -8.615850e-47 |
| Msa0260610 | Msa0945110 | 0.828947 | 6.773091e-55 | -8.615850e-47 |
| Msa0260610 | Msa0959310 | 0.803995 | 2.670635e-49 | -8.615850e-47 |
| Msa0260610 | Msa0959360 | 0.803017 | 4.259590e-49 | -8.615850e-47 |
| Msa0260610 | Msa0975340 | 0.805503 | 1.293502e-49 | -8.615850e-47 |
| Msa0260610 | Msa0979730 | 0.812536 | 4.035715e-51 | -8.615850e-47 |
| Msa0260610 | Msa1003750 | 0.801724 | 7.868319e-49 | -8.615850e-47 |
| Msa0260610 | Msa1007270 | 0.804215 | 2.403591e-49 | -8.615850e-47 |
| Msa0260610 | Msa1019430 | 0.810423 | 1.161524e-50 | -8.615850e-47 |
| Msa0260610 | Msa1019470 | 0.800577 | 1.350191e-48 | -8.615850e-47 |
| Msa0260610 | Msa1020510 | 0.802197 | 6.290123e-49 | -8.615850e-47 |
| Msa0260610 | Msa1045140 | 0.831092 | 2.030122e-55 | -8.615850e-47 |
| Msa0260610 | Msa1048920 | 0.811734 | 6.037225e-51 | -8.615850e-47 |
| Msa0260610 | Msa1051830 | 0.800830 | 1.199146e-48 | -8.615850e-47 |
| Msa0260610 | Msa1074810 | 0.804448 | 2.150178e-49 | -8.615850e-47 |
| Msa0260610 | Msa1084960 | 0.803750 | 3.003491e-49 | -8.615850e-47 |
| Msa0260610 | Msa1085200 | 0.806464 | 8.122451e-50 | -8.615850e-47 |
| Msa0260610 | Msa1097640 | 0.804750 | 1.859532e-49 | -8.615850e-47 |
| Msa0260610 | Msa1103500 | 0.808250 | 3.396524e-50 | -8.615850e-47 |
| Msa0260610 | Msa1108160 | 0.803066 | 4.162270e-49 | -8.615850e-47 |
| Msa0260610 | Msa1139810 | 0.819961 | 8.820631e-53 | -8.615850e-47 |
| Msa0260610 | Msa1140210 | 0.812314 | 4.512309e-51 | -8.615850e-47 |
| Msa0260610 | Msa1147900 | 0.817400 | 3.363062e-52 | -8.615850e-47 |
| Msa0260610 | Msa1171710 | 0.810371 | 1.191751e-50 | -8.615850e-47 |
| Msa0260610 | Msa1182860 | 0.827001 | 1.991173e-54 | -8.615850e-47 |
| Msa0260610 | Msa1201650 | 0.821806 | 3.319751e-53 | -8.615850e-47 |
| Msa0260610 | Msa1209460 | 0.839864 | 1.227612e-57 | -8.615850e-47 |
| Msa0260610 | Msa1222850 | 0.815793 | 7.706396e-52 | -8.615850e-47 |
| Msa0260610 | Msa1223470 | 0.808440 | 3.093823e-50 | -8.615850e-47 |
| Msa0260610 | Msa1225250 | 0.800346 | 1.504828e-48 | -8.615850e-47 |
| Msa0260610 | Msa1231550 | 0.827658 | 1.385194e-54 | -8.615850e-47 |
| Msa0260610 | Msa1232710 | 0.809781 | 1.596503e-50 | -8.615850e-47 |
| Msa0260610 | Msa1242230 | 0.802510 | 5.420592e-49 | -8.615850e-47 |
| Msa0260610 | Msa1242240 | 0.805788 | 1.127342e-49 | -8.615850e-47 |
| Msa0260610 | Msa1252190 | 0.814423 | 1.552131e-51 | -8.615850e-47 |
| Msa0260610 | Msa1261010 | 0.807997 | 3.845590e-50 | -8.615850e-47 |
| Msa0260610 | Msa1269480 | 0.814070 | 1.857815e-51 | -8.615850e-47 |
| Msa0260610 | Msa1272900 | 0.803985 | 2.683979e-49 | -8.615850e-47 |
| Msa0260610 | Msa1283840 | 0.806118 | 9.608537e-50 | -8.615850e-47 |
| Msa0260610 | Msa1284260 | 0.803172 | 3.957513e-49 | -8.615850e-47 |
| Msa0260610 | Msa1292830 | 0.801498 | 8.752587e-49 | -8.615850e-47 |
| Msa0260610 | Msa1298820 | 0.823587 | 1.278103e-53 | -8.615850e-47 |
| Msa0260610 | Msa1300490 | 0.830927 | 2.229527e-55 | -8.615850e-47 |
| Msa0260610 | Msa1302830 | 0.819743 | 9.896518e-53 | -8.615850e-47 |
| Msa0260610 | Msa1313300 | 0.802772 | 4.788199e-49 | -8.615850e-47 |
| Msa0260610 | Msa1330410 | 0.836909 | 7.096828e-57 | -8.615850e-47 |
| Msa0260610 | Msa1331590 | 0.803583 | 3.253372e-49 | -8.615850e-47 |
| Msa0260610 | Msa1346370 | 0.820255 | 7.553256e-53 | -8.615850e-47 |
| Msa0260610 | Msa1367370 | 0.829417 | 5.207991e-55 | -8.615850e-47 |
| Msa0260610 | Msa1369550 | 0.808833 | 2.550096e-50 | -8.615850e-47 |
| Msa0260610 | Msa1370010 | 0.852018 | 6.077769e-61 | -8.615850e-47 |
| Msa0260610 | Msa1372230 | 0.810500 | 1.117843e-50 | -8.615850e-47 |
| Msa0260610 | Msa1374040 | 0.808152 | 3.564355e-50 | -8.615850e-47 |
| Msa0260610 | Msa1374550 | 0.822448 | 2.355907e-53 | -8.615850e-47 |
| Msa0260610 | Msa1391770 | 0.809674 | 1.683393e-50 | -8.615850e-47 |
| Msa0260610 | Msa1398340 | 0.800478 | 1.414522e-48 | -8.615850e-47 |
| Msa0260610 | Msa1409870 | 0.820835 | 5.560753e-53 | -8.615850e-47 |
| Msa0260610 | Msa1417420 | 0.817486 | 3.217227e-52 | -8.615850e-47 |
| Msa0260610 | Msa1420860 | 0.800228 | 1.590482e-48 | -8.615850e-47 |
| Msa0260610 | Msa1422420 | 0.800140 | 1.656988e-48 | -8.615850e-47 |
| Msa0260610 | Msa1426000 | 0.800353 | 1.499708e-48 | -8.615850e-47 |
| Msa0260610 | Msa1427060 | 0.800113 | 1.678625e-48 | -8.615850e-47 |
| Msa0260610 | Msa1443110 | 0.831979 | 1.227860e-55 | -8.615850e-47 |
| Msa0260610 | Msa1446830 | 0.804616 | 1.983204e-49 | -8.615850e-47 |
| Msa0260610 | Msa1453740 | 0.823483 | 1.351596e-53 | -8.615850e-47 |
| Msa0260610 | Msa1459380 | 0.823277 | 1.510514e-53 | -8.615850e-47 |
| Msa0260610 | Msa1459690 | 0.801406 | 9.140634e-49 | -8.615850e-47 |
| Msa0260610 | Msa1460020 | 0.827183 | 1.800403e-54 | -8.615850e-47 |
| Msa0260610 | Msa1461300 | 0.819439 | 1.160866e-52 | -8.615850e-47 |
| Msa0260610 | Msa1464810 | 0.805221 | 1.482232e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260610 | MtrunA17_Chr2g0332121 | 91.041 | 413 | 33 | 3 | 1 | 412 | 1 | 410 | 0.0 | 719 |
| Msa0260610 | MtrunA17_Chr4g0002411 | 76.129 | 155 | 37 | 0 | 82 | 236 | 18 | 172 | 1.65e-70 | 219 |
| Msa0260610 | MtrunA17_Chr3g0133791 | 41.485 | 229 | 128 | 2 | 9 | 237 | 5 | 227 | 4.98e-48 | 163 |
| Msa0260610 | MtrunA17_Chr8g0375001 | 57.143 | 105 | 45 | 0 | 130 | 234 | 34 | 138 | 4.08e-38 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260610 | AT5G58280.3 | 46.875 | 256 | 104 | 4 | 12 | 240 | 5 | 255 | 7.67e-66 | 213 |
| Msa0260610 | AT5G58280.2 | 46.484 | 256 | 106 | 4 | 12 | 240 | 5 | 256 | 9.19e-65 | 210 |
| Msa0260610 | AT5G58280.1 | 46.522 | 230 | 111 | 3 | 12 | 240 | 5 | 223 | 4.68e-59 | 194 |
| Msa0260610 | AT3G19184.1 | 43.496 | 246 | 125 | 4 | 12 | 255 | 8 | 241 | 1.94e-48 | 166 |
| Msa0260610 | AT3G19184.2 | 43.496 | 246 | 125 | 4 | 12 | 255 | 8 | 241 | 2.12e-48 | 166 |
| Msa0260610 | AT5G42700.1 | 41.228 | 228 | 117 | 4 | 10 | 234 | 7 | 220 | 1.12e-44 | 155 |
| Msa0260610 | AT5G42700.2 | 53.333 | 120 | 55 | 1 | 116 | 234 | 56 | 175 | 2.47e-36 | 131 |
Find 89 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTTCTGTCAATGTTT+TGG | 0.183464 | 2_2:-58302449 | None:intergenic |
| ACAAGATTAGTCATTGATTT+TGG | 0.193878 | 2_2:-58302593 | None:intergenic |
| ATTTGCATTGAAACATAAAT+TGG | 0.234518 | 2_2:+58303618 | Msa0260610:CDS |
| GGTTGAAGCAGCAAGATTTA+AGG | 0.234558 | 2_2:+58303669 | Msa0260610:CDS |
| TCGAGGTGTGCATCCTCTTT+TGG | 0.264938 | 2_2:-58305079 | None:intergenic |
| GGCCGCTTCATACTTGTTAC+TGG | 0.280232 | 2_2:-58301574 | None:intergenic |
| ACAAATTTATCATCTGTCTT+TGG | 0.306337 | 2_2:-58303517 | None:intergenic |
| AGTCTTGGAGACCAGTTAAA+AGG | 0.309121 | 2_2:+58305350 | Msa0260610:exon |
| CTCCTTGTTCCCTTGTTATG+AGG | 0.311462 | 2_2:+58305435 | Msa0260610:three_prime_UTR |
| ATACGAAGGAACTGTGTTTC+TGG | 0.317329 | 2_2:-58302642 | None:intergenic |
| ATCAATGACTAATCTTGTTC+TGG | 0.319215 | 2_2:+58302598 | Msa0260610:CDS |
| TGTATCTGAGAAGATTCTTT+TGG | 0.324472 | 2_2:+58305165 | Msa0260610:CDS |
| TTAAATCAGAGGAAACTTCT+AGG | 0.340932 | 2_2:+58304996 | Msa0260610:CDS |
| TCGAAGACTGCAAATTGAAT+TGG | 0.346865 | 2_2:-58303258 | None:intergenic |
| TTGAAAAGATTGAGCTGAAA+AGG | 0.354176 | 2_2:-58301243 | None:intergenic |
| TTCCTCAAGTCTTTGTTCTC+TGG | 0.355734 | 2_2:-58301595 | None:intergenic |
| AACATTAAACTCTTATTTAG+TGG | 0.358356 | 2_2:+58305510 | Msa0260610:three_prime_UTR |
| GGCAACTTTGTAGCTGCCTC+TGG | 0.368043 | 2_2:-58305112 | None:intergenic |
| AAAAGAAGAAATCGATGCTT+TGG | 0.405663 | 2_2:+58304841 | Msa0260610:CDS |
| TTTACCGTAGATTTCTTTGC+TGG | 0.411866 | 2_2:-58302475 | None:intergenic |
| AGCTGAAAAGGAGAAAGAAA+AGG | 0.416394 | 2_2:-58301231 | None:intergenic |
| AGCATTGACTTGATAAATGA+TGG | 0.425290 | 2_2:-58303283 | None:intergenic |
| TTAGAAAGAGAGGTTAGTCT+TGG | 0.427459 | 2_2:+58305335 | Msa0260610:exon |
| CCTCTGGTTTCACTGTTTCG+AGG | 0.427493 | 2_2:-58305096 | None:intergenic |
| ATGTTCCTCACAAAATCTAC+TGG | 0.429660 | 2_2:-58303491 | None:intergenic |
| CTATATTTGCCTGTGGGTGA+TGG | 0.437247 | 2_2:+58305470 | Msa0260610:three_prime_UTR |
| GCTGAAAAGGAGAAAGAAAA+GGG | 0.445227 | 2_2:-58301230 | None:intergenic |
| TCCTTGTTCCCTTGTTATGA+GGG | 0.446813 | 2_2:+58305436 | Msa0260610:three_prime_UTR |
| ACGTGCTTGGGATGCGGCAG+AGG | 0.447956 | 2_2:+58303231 | Msa0260610:CDS |
| CTTGACCTCCTCTGCAATTG+TGG | 0.451277 | 2_2:-58303043 | None:intergenic |
| AAAGGGGCAATAGTGTCTTT+TGG | 0.454116 | 2_2:-58301188 | None:intergenic |
| CAAAGTTGCCAAACAAGAAA+AGG | 0.458834 | 2_2:+58305125 | Msa0260610:CDS |
| TTCATACTTGTTACTGGTAG+TGG | 0.459676 | 2_2:-58301568 | None:intergenic |
| AGGTTGTTTGAAATACTGAT+TGG | 0.460286 | 2_2:+58305396 | Msa0260610:three_prime_UTR |
| CTCAAGAAAGAAAACGTGCT+TGG | 0.462354 | 2_2:+58303218 | Msa0260610:CDS |
| GATTTAACAGTTTCAGACTT+TGG | 0.463466 | 2_2:-58304980 | None:intergenic |
| CGCTTACGCTGCGAGGCCAC+TGG | 0.471761 | 2_2:+58303174 | Msa0260610:CDS |
| GGAAAACAAGAAGAGGTTTG+AGG | 0.478514 | 2_2:+58301614 | Msa0260610:CDS |
| TCAAGAAAGAAAACGTGCTT+GGG | 0.482815 | 2_2:+58303219 | Msa0260610:CDS |
| CTAATCTTGTTCTGGAACCT+AGG | 0.484454 | 2_2:+58302606 | Msa0260610:CDS |
| TGAATATGAAGAGGTGGAAA+GGG | 0.485746 | 2_2:-58301205 | None:intergenic |
| AAAGAAAACTAGAATGCAAA+AGG | 0.490045 | 2_2:+58304934 | Msa0260610:CDS |
| TCGACATCAACATCCTCAAC+AGG | 0.494792 | 2_2:-58305235 | None:intergenic |
| GTCAAGGTCAAGTTCGTCAT+GGG | 0.498280 | 2_2:+58303066 | Msa0260610:CDS |
| ACCTCCTCTGCAATTGTGGA+AGG | 0.511132 | 2_2:-58303039 | None:intergenic |
| GTTTGTAAGCAGATGGCAAA+GGG | 0.511659 | 2_2:+58301540 | Msa0260610:intron |
| GAAGACTGACTTAGAGAAGA+AGG | 0.513775 | 2_2:+58305207 | Msa0260610:CDS |
| TTGAATATGAAGAGGTGGAA+AGG | 0.514612 | 2_2:-58301206 | None:intergenic |
| AAAATGGGCTTAGTGGTGGC+TGG | 0.515469 | 2_2:+58303590 | Msa0260610:CDS |
| AAGAAAAGGAAGGCAAAAGA+AGG | 0.525873 | 2_2:+58305139 | Msa0260610:CDS |
| TACTGCAATTGAGCCAAAAG+AGG | 0.526506 | 2_2:+58305066 | Msa0260610:CDS |
| GGGCTTAGTGGTGGCTGGAG+AGG | 0.533204 | 2_2:+58303595 | Msa0260610:CDS |
| AGTTCCTTCGTATGCTGAAG+AGG | 0.549926 | 2_2:+58302652 | Msa0260610:CDS |
| ATTTGAAAATATAGATGTAG+AGG | 0.552770 | 2_2:+58304814 | Msa0260610:CDS |
| ATCGATGCTTTGGTGGAAGA+CGG | 0.557466 | 2_2:+58304851 | Msa0260610:CDS |
| AGAAGAAATCGATGCTTTGG+TGG | 0.560673 | 2_2:+58304844 | Msa0260610:CDS |
| AAGCAATATCCCTCATAACA+AGG | 0.563428 | 2_2:-58305445 | None:intergenic |
| ATCTCTTAGCCATCACCCAC+AGG | 0.563702 | 2_2:-58305479 | None:intergenic |
| ACCTTCCACAATTGCAGAGG+AGG | 0.564311 | 2_2:+58303038 | Msa0260610:CDS |
| CACAATTGCAGAGGAGGTCA+AGG | 0.568720 | 2_2:+58303044 | Msa0260610:CDS |
| TTGAAACATAAATTGGATGA+TGG | 0.570936 | 2_2:+58303625 | Msa0260610:CDS |
| AACAGCTATAAACATGAGAC+CGG | 0.574078 | 2_2:-58303306 | None:intergenic |
| AAGAAAACGTGCTTGGGATG+CGG | 0.574526 | 2_2:+58303225 | Msa0260610:CDS |
| CATTTATCAAGTCAATGCTC+CGG | 0.576831 | 2_2:+58303287 | Msa0260610:CDS |
| GCTACTTTGATTTCATCCAG+TGG | 0.577540 | 2_2:-58303190 | None:intergenic |
| GGTCAAGTTCGTCATGGGGA+AGG | 0.581595 | 2_2:+58303071 | Msa0260610:CDS |
| GTCTGAAACTGTTAAATCAG+AGG | 0.582113 | 2_2:+58304985 | Msa0260610:CDS |
| GGTCAAGGTCAAGTTCGTCA+TGG | 0.586271 | 2_2:+58303065 | Msa0260610:CDS |
| TCCCTCATAACAAGGGAACA+AGG | 0.592424 | 2_2:-58305437 | None:intergenic |
| GACTTGAGGAAAACAAGAAG+AGG | 0.599382 | 2_2:+58301607 | Msa0260610:CDS |
| CTGGCACGAGAAGAGCGCCT+AGG | 0.600809 | 2_2:-58302623 | None:intergenic |
| TGTTTGTAAGCAGATGGCAA+AGG | 0.604493 | 2_2:+58301539 | Msa0260610:intron |
| TACCAGTAACAAGTATGAAG+CGG | 0.609161 | 2_2:+58301572 | Msa0260610:CDS |
| TGTTCCTCACAAAATCTACT+GGG | 0.611018 | 2_2:-58303490 | None:intergenic |
| TGCAGAGGAGGTCAAGGTCA+AGG | 0.611775 | 2_2:+58303050 | Msa0260610:CDS |
| ATCTAAAACTGTGAAACCGA+AGG | 0.611948 | 2_2:+58304904 | Msa0260610:CDS |
| GAAGAAGGAAGAACCTGTTG+AGG | 0.612004 | 2_2:+58305222 | Msa0260610:CDS |
| AAGTCCAGCAAAGAAATCTA+CGG | 0.612501 | 2_2:+58302471 | Msa0260610:CDS |
| AGGGTTTGAATATGAAGAGG+TGG | 0.614688 | 2_2:-58301211 | None:intergenic |
| AAAAGGGTTTGAATATGAAG+AGG | 0.616077 | 2_2:-58301214 | None:intergenic |
| GAATATGAAGAGGTGGAAAG+GGG | 0.618095 | 2_2:-58301204 | None:intergenic |
| AGCAATATCCCTCATAACAA+GGG | 0.635861 | 2_2:-58305444 | None:intergenic |
| GTTGCCAAACAAGAAAAGGA+AGG | 0.644080 | 2_2:+58305129 | Msa0260610:CDS |
| TCAGTTACGCTTACGCTGCG+AGG | 0.662896 | 2_2:+58303167 | Msa0260610:intron |
| TCAAGGTCAAGTTCGTCATG+GGG | 0.675645 | 2_2:+58303067 | Msa0260610:CDS |
| GGCCAGAGAACAAAGACTTG+AGG | 0.687082 | 2_2:+58301593 | Msa0260610:CDS |
| CAGACCTTCCACAATTGCAG+AGG | 0.690855 | 2_2:+58303035 | Msa0260610:CDS |
| CTTACCTCTTCAGCATACGA+AGG | 0.705335 | 2_2:-58302656 | None:intergenic |
| CCTCGAAACAGTGAAACCAG+AGG | 0.741911 | 2_2:+58305096 | Msa0260610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAATAATTAACTTATTT+TGG | + | chr2_2:58303824-58303843 | Msa0260610:intron | 10.0% |
| !!! | GATTTTAAAATATTACAAAA+AGG | - | chr2_2:58304029-58304048 | None:intergenic | 10.0% |
| !! | TTAAAATCTTCAAATTTAAA+AGG | + | chr2_2:58304041-58304060 | Msa0260610:intron | 10.0% |
| !!! | GTTTTTCAATAAATTTATAT+TGG | - | chr2_2:58304439-58304458 | None:intergenic | 10.0% |
| !! | GAAAAATATAAATTTATTGA+AGG | + | chr2_2:58304482-58304501 | Msa0260610:intron | 10.0% |
| !!! | TTTTCTTTAACACAAAAAAA+GGG | - | chr2_2:58301347-58301366 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTAACACAAAAAA+AGG | - | chr2_2:58301348-58301367 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTGTTAAAGAAAA+TGG | + | chr2_2:58301347-58301366 | Msa0260610:intron | 15.0% |
| !!! | TTTTTCAATAGAAAATCAAA+AGG | - | chr2_2:58301434-58301453 | None:intergenic | 15.0% |
| !! | TTATATATACTACTCAATAT+AGG | - | chr2_2:58302078-58302097 | None:intergenic | 15.0% |
| !!! | AAACTTGCAATTTTTTTATT+TGG | + | chr2_2:58302495-58302514 | Msa0260610:intron | 15.0% |
| !! | TTATATATTCCATTATACAA+AGG | - | chr2_2:58302769-58302788 | None:intergenic | 15.0% |
| !! | AGTAGAAAAATATAAATACT+AGG | + | chr2_2:58302808-58302827 | Msa0260610:intron | 15.0% |
| !!! | TATATTATCTTTATTTTGTC+AGG | + | chr2_2:58303462-58303481 | Msa0260610:intron | 15.0% |
| !!! | ATATTATCTTTATTTTGTCA+GGG | + | chr2_2:58303463-58303482 | Msa0260610:intron | 15.0% |
| !! | AATTTATTGAAGGTTAATTT+AGG | + | chr2_2:58304492-58304511 | Msa0260610:intron | 15.0% |
| !! | TAAGATTATCTTAAACAAAG+TGG | - | chr2_2:58301646-58301665 | None:intergenic | 20.0% |
| !! | TCATTTATTTACCTTAATCA+TGG | + | chr2_2:58301677-58301696 | Msa0260610:intron | 20.0% |
| !!! | AAATCAAGGTTTTTAAATAG+TGG | + | chr2_2:58301755-58301774 | Msa0260610:intron | 20.0% |
| !! | TTTGATATATACTACTCAAT+CGG | - | chr2_2:58301900-58301919 | None:intergenic | 20.0% |
| !! | ATATATAAAGCTAGTATGAA+TGG | + | chr2_2:58302781-58302800 | Msa0260610:intron | 20.0% |
| !! | ATATAAATACTAGGAATATG+TGG | + | chr2_2:58302817-58302836 | Msa0260610:intron | 20.0% |
| !! | ATATTTGAATTCAAGAATCA+AGG | - | chr2_2:58302936-58302955 | None:intergenic | 20.0% |
| !! | TATTTCACTTTATTACAGTT+TGG | + | chr2_2:58303010-58303029 | Msa0260610:intron | 20.0% |
| !!! | AGATGATAAATTTGTTTTAG+AGG | + | chr2_2:58303525-58303544 | Msa0260610:CDS | 20.0% |
| !! | ATTTGCATTGAAACATAAAT+TGG | + | chr2_2:58303618-58303637 | Msa0260610:CDS | 20.0% |
| !!! | ATTTTGAAAAAACTAAACTG+TGG | + | chr2_2:58303864-58303883 | Msa0260610:intron | 20.0% |
| !!! | AAAAACTTGTTCTATAAGAA+AGG | + | chr2_2:58304453-58304472 | Msa0260610:intron | 20.0% |
| !! | ATTTGAAAATATAGATGTAG+AGG | + | chr2_2:58304814-58304833 | Msa0260610:CDS | 20.0% |
| !!! | TTTAGATTTTTTGATTGCTT+TGG | - | chr2_2:58304891-58304910 | None:intergenic | 20.0% |
| !!! | AACATTAAACTCTTATTTAG+TGG | + | chr2_2:58305510-58305529 | Msa0260610:three_prime_UTR | 20.0% |
| ! | TATGCATTTGTAAAATGCTT+AGG | + | chr2_2:58301716-58301735 | Msa0260610:intron | 25.0% |
| !! | TTTCATGTTGATTGAAATCA+AGG | + | chr2_2:58301741-58301760 | Msa0260610:intron | 25.0% |
| ! | ATAAACATCAAAAACCTTGA+TGG | + | chr2_2:58301837-58301856 | Msa0260610:intron | 25.0% |
| ! | TTGATATATACTACTCAATC+GGG | - | chr2_2:58301899-58301918 | None:intergenic | 25.0% |
| !!! | TAAGTCATGGTTTTAAATTG+TGG | + | chr2_2:58301990-58302009 | Msa0260610:intron | 25.0% |
| ! | AATATTCAAGAGTTTCATGT+TGG | + | chr2_2:58302146-58302165 | Msa0260610:intron | 25.0% |
| !!! | TTTCATGTTGGTTTATATCA+TGG | + | chr2_2:58302158-58302177 | Msa0260610:intron | 25.0% |
| !! | TGATAATAGTTGTGATAATG+AGG | + | chr2_2:58302283-58302302 | Msa0260610:intron | 25.0% |
| ! | TAACACTAAAACTATACTAG+TGG | - | chr2_2:58302349-58302368 | None:intergenic | 25.0% |
| !!! | ACAAGATTAGTCATTGATTT+TGG | - | chr2_2:58302596-58302615 | None:intergenic | 25.0% |
| ! | TATATTCCATTATACAAAGG+TGG | - | chr2_2:58302766-58302785 | None:intergenic | 25.0% |
| !! | ATTCTCATACTTTTGTCTTA+GGG | - | chr2_2:58302858-58302877 | None:intergenic | 25.0% |
| !! | AATTCTCATACTTTTGTCTT+AGG | - | chr2_2:58302859-58302878 | None:intergenic | 25.0% |
| ! | AAAGTATGAGAATTTATCTC+TGG | + | chr2_2:58302865-58302884 | Msa0260610:intron | 25.0% |
| ! | AAATTGAAATGTTAGTGACA+TGG | + | chr2_2:58303133-58303152 | Msa0260610:intron | 25.0% |
| ! | ACAAATTTATCATCTGTCTT+TGG | - | chr2_2:58303520-58303539 | None:intergenic | 25.0% |
| !!! | TTTGTTTTAGAGGATGAAAA+AGG | + | chr2_2:58303535-58303554 | Msa0260610:CDS | 25.0% |
| ! | TTGAAACATAAATTGGATGA+TGG | + | chr2_2:58303625-58303644 | Msa0260610:CDS | 25.0% |
| ! | AATAATAACTAAAACCAGCT+TGG | + | chr2_2:58303782-58303801 | Msa0260610:intron | 25.0% |
| !!! | GTTTTTTCAAAATCAGATCA+TGG | - | chr2_2:58303857-58303876 | None:intergenic | 25.0% |
| !!! | AATTTAAGTTTCTAGTCTTG+AGG | + | chr2_2:58303890-58303909 | Msa0260610:intron | 25.0% |
| ! | TGAATATCAAAGTTCATTAG+TGG | - | chr2_2:58303941-58303960 | None:intergenic | 25.0% |
| ! | AAGAAGAAACTCAATATCAA+AGG | - | chr2_2:58303991-58304010 | None:intergenic | 25.0% |
| ! | TGACCAAATTAATTCTTACA+AGG | + | chr2_2:58304107-58304126 | Msa0260610:intron | 25.0% |
| !! | AAGCCTTGTAAGAATTAATT+TGG | - | chr2_2:58304113-58304132 | None:intergenic | 25.0% |
| !!! | ACCATTTTAGAATTTGAGAA+GGG | - | chr2_2:58304189-58304208 | None:intergenic | 25.0% |
| !!! | TACCATTTTAGAATTTGAGA+AGG | - | chr2_2:58304190-58304209 | None:intergenic | 25.0% |
| !! | CCTACTTATAACAACTATTT+TGG | - | chr2_2:58304333-58304352 | None:intergenic | 25.0% |
| ! | CCAAAATAGTTGTTATAAGT+AGG | + | chr2_2:58304330-58304349 | Msa0260610:intron | 25.0% |
| !!! | AACTTTTGGAGTTTACTTTT+AGG | + | chr2_2:58304374-58304393 | Msa0260610:intron | 25.0% |
| !!! | ACTTTTGGAGTTTACTTTTA+GGG | + | chr2_2:58304375-58304394 | Msa0260610:intron | 25.0% |
| !!! | TACTTTTAGGGTTGAAATTA+TGG | + | chr2_2:58304387-58304406 | Msa0260610:intron | 25.0% |
| ! | TTTGCAAACAAAAAACAAGT+GGG | - | chr2_2:58304629-58304648 | None:intergenic | 25.0% |
| ! | ATTTGCAAACAAAAAACAAG+TGG | - | chr2_2:58304630-58304649 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTGCAAATGTTCT+CGG | + | chr2_2:58304635-58304654 | Msa0260610:intron | 25.0% |
| ! | AAAGAAAACTAGAATGCAAA+AGG | + | chr2_2:58304934-58304953 | Msa0260610:CDS | 25.0% |
| ! | TTCTCATAACAAAAAGCAAA+AGG | + | chr2_2:58305030-58305049 | Msa0260610:CDS | 25.0% |
| !! | GTATTTCATAACCTTTTAAC+TGG | - | chr2_2:58305364-58305383 | None:intergenic | 25.0% |
| !! | TGAAATACTGATGCATTTTA+AGG | + | chr2_2:58305376-58305395 | Msa0260610:three_prime_UTR | 25.0% |
| !! | TTTTGATATATGTAGCAGAA+TGG | + | chr2_2:58305542-58305561 | Msa0260610:three_prime_UTR | 25.0% |
| AAAAGGGTTTGAATATGAAG+AGG | - | chr2_2:58301217-58301236 | None:intergenic | 30.0% | |
| TTGAAAAGATTGAGCTGAAA+AGG | - | chr2_2:58301246-58301265 | None:intergenic | 30.0% | |
| ! | ACTTTTCTTTCTCTCAATCA+AGG | + | chr2_2:58301265-58301284 | Msa0260610:five_prime_UTR | 30.0% |
| ATTCATTGTTTGTAAGCAGA+TGG | + | chr2_2:58301533-58301552 | Msa0260610:intron | 30.0% | |
| AAAGTTTCAAGCCATGATTA+AGG | - | chr2_2:58301691-58301710 | None:intergenic | 30.0% | |
| AAAGAAATAGTTGTCAGATG+TGG | + | chr2_2:58301800-58301819 | Msa0260610:intron | 30.0% | |
| ! | ATAACCCGCAAAAACATTTT+AGG | - | chr2_2:58301868-58301887 | None:intergenic | 30.0% |
| AAAATTCAAGACTTCTGTGT+TGG | + | chr2_2:58301965-58301984 | Msa0260610:intron | 30.0% | |
| ! | TTTTACACAGACATTTACAC+TGG | - | chr2_2:58302128-58302147 | None:intergenic | 30.0% |
| ! | ATGATTTTGTAACACAGTTG+AGG | - | chr2_2:58302212-58302231 | None:intergenic | 30.0% |
| CATTGAAATAGAATCCAACT+AGG | - | chr2_2:58302262-58302281 | None:intergenic | 30.0% | |
| ! | GGTAGTTTGCATAAATCTAT+GGG | - | chr2_2:58302315-58302334 | None:intergenic | 30.0% |
| ! | AGGTAGTTTGCATAAATCTA+TGG | - | chr2_2:58302316-58302335 | None:intergenic | 30.0% |
| TAAAACTATACTAGTGGTGA+GGG | - | chr2_2:58302343-58302362 | None:intergenic | 30.0% | |
| TAAATCCTTGAGAACAAAAG+GGG | - | chr2_2:58302413-58302432 | None:intergenic | 30.0% | |
| CTAAATCCTTGAGAACAAAA+GGG | - | chr2_2:58302414-58302433 | None:intergenic | 30.0% | |
| ! | TGCAATTTCTGTCAATGTTT+TGG | - | chr2_2:58302452-58302471 | None:intergenic | 30.0% |
| ATCAATGACTAATCTTGTTC+TGG | + | chr2_2:58302598-58302617 | Msa0260610:CDS | 30.0% | |
| ATGATAGTTTGAACTTTGCA+AGG | - | chr2_2:58302690-58302709 | None:intergenic | 30.0% | |
| ATCTTACCACCTTTGTATAA+TGG | + | chr2_2:58302757-58302776 | Msa0260610:intron | 30.0% | |
| !!! | AATTTATCTCTGGTTTTTGC+AGG | + | chr2_2:58302875-58302894 | Msa0260610:intron | 30.0% |
| TTTCTGCAAAACTATCATGT+TGG | - | chr2_2:58302972-58302991 | None:intergenic | 30.0% | |
| AAATGTTAGTGACATGGTTA+TGG | + | chr2_2:58303139-58303158 | Msa0260610:intron | 30.0% | |
| AATGTTAGTGACATGGTTAT+GGG | + | chr2_2:58303140-58303159 | Msa0260610:intron | 30.0% | |
| !! | AGCATTGACTTGATAAATGA+TGG | - | chr2_2:58303286-58303305 | None:intergenic | 30.0% |
| !! | CTCATGTTTATAGCTGTTTT+TGG | + | chr2_2:58303311-58303330 | Msa0260610:CDS | 30.0% |
| !!! | TGTTTATAGCTGTTTTTGGT+TGG | + | chr2_2:58303315-58303334 | Msa0260610:CDS | 30.0% |
| ACATTGAAGAATGAACAACA+AGG | - | chr2_2:58303387-58303406 | None:intergenic | 30.0% | |
| TTTACCTTGCCCATAAAAAT+GGG | + | chr2_2:58303575-58303594 | Msa0260610:CDS | 30.0% | |
| ! | TGATGCAGTAGTTTTTGAAT+TGG | + | chr2_2:58303648-58303667 | Msa0260610:CDS | 30.0% |
| !! | CTTTGAAGTTATAAGAGAGT+TGG | - | chr2_2:58303717-58303736 | None:intergenic | 30.0% |
| CAACTCTCTTATAACTTCAA+AGG | + | chr2_2:58303715-58303734 | Msa0260610:intron | 30.0% | |
| TTGGTGAAAATGTTAGTTGA+TGG | + | chr2_2:58303801-58303820 | Msa0260610:intron | 30.0% | |
| TGAGTTTCTTCTTAAGTTCA+AGG | + | chr2_2:58303998-58304017 | Msa0260610:intron | 30.0% | |
| ! | ACCCTTCTCAAATTCTAAAA+TGG | + | chr2_2:58304185-58304204 | Msa0260610:intron | 30.0% |
| CAAGTTAGTACCATTACAAA+TGG | - | chr2_2:58304245-58304264 | None:intergenic | 30.0% | |
| GACATATCACTAGTAAATGT+GGG | - | chr2_2:58304311-58304330 | None:intergenic | 30.0% | |
| ! | TTTTCCTATGTGCTAACTTT+TGG | + | chr2_2:58304360-58304379 | Msa0260610:intron | 30.0% |
| !! | AACAAAAGCATTTATATGCC+AGG | + | chr2_2:58304697-58304716 | Msa0260610:intron | 30.0% |
| ACTTCCATATGAATTCTGTT+AGG | - | chr2_2:58304746-58304765 | None:intergenic | 30.0% | |
| AAAAGAAGAAATCGATGCTT+TGG | + | chr2_2:58304841-58304860 | Msa0260610:CDS | 30.0% | |
| GATTTAACAGTTTCAGACTT+TGG | - | chr2_2:58304983-58305002 | None:intergenic | 30.0% | |
| TTAAATCAGAGGAAACTTCT+AGG | + | chr2_2:58304996-58305015 | Msa0260610:CDS | 30.0% | |
| ! | TGTATCTGAGAAGATTCTTT+TGG | + | chr2_2:58305165-58305184 | Msa0260610:CDS | 30.0% |
| ! | CCTCTCTTTCTAAAAAACTT+TGG | - | chr2_2:58305328-58305347 | None:intergenic | 30.0% |
| !!! | CCAAAGTTTTTTAGAAAGAG+AGG | + | chr2_2:58305325-58305344 | Msa0260610:CDS | 30.0% |
| ! | AGGTTGTTTGAAATACTGAT+TGG | + | chr2_2:58305396-58305415 | Msa0260610:three_prime_UTR | 30.0% |
| TGAATATGAAGAGGTGGAAA+GGG | - | chr2_2:58301208-58301227 | None:intergenic | 35.0% | |
| TTGAATATGAAGAGGTGGAA+AGG | - | chr2_2:58301209-58301228 | None:intergenic | 35.0% | |
| GCTGAAAAGGAGAAAGAAAA+GGG | - | chr2_2:58301233-58301252 | None:intergenic | 35.0% | |
| AGCTGAAAAGGAGAAAGAAA+AGG | - | chr2_2:58301234-58301253 | None:intergenic | 35.0% | |
| ! | TTCATACTTGTTACTGGTAG+TGG | - | chr2_2:58301571-58301590 | None:intergenic | 35.0% |
| TACCAGTAACAAGTATGAAG+CGG | + | chr2_2:58301572-58301591 | Msa0260610:CDS | 35.0% | |
| !! | CGTGACCTAAAATGTTTTTG+CGG | + | chr2_2:58301860-58301879 | Msa0260610:intron | 35.0% |
| !! | GTGACCTAAAATGTTTTTGC+GGG | + | chr2_2:58301861-58301880 | Msa0260610:intron | 35.0% |
| !! | TTCTGTGTTGGTTTAAGTCA+TGG | + | chr2_2:58301977-58301996 | Msa0260610:intron | 35.0% |
| CATATAAAACCTTGACGTTG+CGG | + | chr2_2:58302229-58302248 | Msa0260610:intron | 35.0% | |
| CTAAAACTATACTAGTGGTG+AGG | - | chr2_2:58302344-58302363 | None:intergenic | 35.0% | |
| ! | AATATCCCCTTTTGTTCTCA+AGG | + | chr2_2:58302405-58302424 | Msa0260610:intron | 35.0% |
| CCTAAATCCTTGAGAACAAA+AGG | - | chr2_2:58302415-58302434 | None:intergenic | 35.0% | |
| ! | CCTTTTGTTCTCAAGGATTT+AGG | + | chr2_2:58302412-58302431 | Msa0260610:intron | 35.0% |
| AAGTCCAGCAAAGAAATCTA+CGG | + | chr2_2:58302471-58302490 | Msa0260610:CDS | 35.0% | |
| TTTACCGTAGATTTCTTTGC+TGG | - | chr2_2:58302478-58302497 | None:intergenic | 35.0% | |
| CTCTGTAAAGAACCAACATT+TGG | + | chr2_2:58302523-58302542 | Msa0260610:intron | 35.0% | |
| AGCTAAGTCAAACCAAATGT+TGG | - | chr2_2:58302538-58302557 | None:intergenic | 35.0% | |
| AAGAATCAAGGATTTCACAG+AGG | - | chr2_2:58302924-58302943 | None:intergenic | 35.0% | |
| TCAAGAAAGAAAACGTGCTT+GGG | + | chr2_2:58303219-58303238 | Msa0260610:CDS | 35.0% | |
| TCGAAGACTGCAAATTGAAT+TGG | - | chr2_2:58303261-58303280 | None:intergenic | 35.0% | |
| CATTTATCAAGTCAATGCTC+CGG | + | chr2_2:58303287-58303306 | Msa0260610:CDS | 35.0% | |
| AACAGCTATAAACATGAGAC+CGG | - | chr2_2:58303309-58303328 | None:intergenic | 35.0% | |
| !!! | TATAGCTGTTTTTGGTTGGT+AGG | + | chr2_2:58303319-58303338 | Msa0260610:intron | 35.0% |
| TGTTCCTCACAAAATCTACT+GGG | - | chr2_2:58303493-58303512 | None:intergenic | 35.0% | |
| ATGTTCCTCACAAAATCTAC+TGG | - | chr2_2:58303494-58303513 | None:intergenic | 35.0% | |
| GTTTACCTTGCCCATAAAAA+TGG | + | chr2_2:58303574-58303593 | Msa0260610:CDS | 35.0% | |
| !! | ACCACTAAGCCCATTTTTAT+GGG | - | chr2_2:58303587-58303606 | None:intergenic | 35.0% |
| TAAGAGAGTTGGATGAGAAT+CGG | - | chr2_2:58303706-58303725 | None:intergenic | 35.0% | |
| TCTATCACGACAGATTGATT+GGG | - | chr2_2:58303759-58303778 | None:intergenic | 35.0% | |
| ! | AACTAACATTTTCACCAAGC+TGG | - | chr2_2:58303799-58303818 | None:intergenic | 35.0% |
| GGAAGAGGAATACTTTCAAA+TGG | + | chr2_2:58303911-58303930 | Msa0260610:intron | 35.0% | |
| !!! | TCTCATGTGCTAGTTTTTGT+GGG | + | chr2_2:58304153-58304172 | Msa0260610:intron | 35.0% |
| GTTAGTACCATTACAAATGG+TGG | - | chr2_2:58304242-58304261 | None:intergenic | 35.0% | |
| GGACATATCACTAGTAAATG+TGG | - | chr2_2:58304312-58304331 | None:intergenic | 35.0% | |
| AACTCCAAAAGTTAGCACAT+AGG | - | chr2_2:58304367-58304386 | None:intergenic | 35.0% | |
| GGCACTAACTACTTAGAATT+TGG | - | chr2_2:58304418-58304437 | None:intergenic | 35.0% | |
| TGTTTATATTCGAGACCCAA+TGG | + | chr2_2:58304552-58304571 | Msa0260610:intron | 35.0% | |
| !! | AAAAGCATTTATATGCCAGG+TGG | + | chr2_2:58304700-58304719 | Msa0260610:intron | 35.0% |
| GTGTCCTAACAGAATTCATA+TGG | + | chr2_2:58304739-58304758 | Msa0260610:intron | 35.0% | |
| ! | ATCTAAAACTGTGAAACCGA+AGG | + | chr2_2:58304904-58304923 | Msa0260610:CDS | 35.0% |
| ! | GTTTTCTTTGTAGCTTCCTT+CGG | - | chr2_2:58304923-58304942 | None:intergenic | 35.0% |
| ! | GTCTGAAACTGTTAAATCAG+AGG | + | chr2_2:58304985-58305004 | Msa0260610:CDS | 35.0% |
| CAAAGTTGCCAAACAAGAAA+AGG | + | chr2_2:58305125-58305144 | Msa0260610:CDS | 35.0% | |
| ! | TTTGCCTTCCTTTTCTTGTT+TGG | - | chr2_2:58305136-58305155 | None:intergenic | 35.0% |
| AAGAAAAGGAAGGCAAAAGA+AGG | + | chr2_2:58305139-58305158 | Msa0260610:CDS | 35.0% | |
| !! | TTAGAAAGAGAGGTTAGTCT+TGG | + | chr2_2:58305335-58305354 | Msa0260610:exon | 35.0% |
| AGCAATATCCCTCATAACAA+GGG | - | chr2_2:58305447-58305466 | None:intergenic | 35.0% | |
| AAGCAATATCCCTCATAACA+AGG | - | chr2_2:58305448-58305467 | None:intergenic | 35.0% | |
| ! | TGCTTTTCTATATTTGCCTG+TGG | + | chr2_2:58305463-58305482 | Msa0260610:three_prime_UTR | 35.0% |
| ! | GCTTTTCTATATTTGCCTGT+GGG | + | chr2_2:58305464-58305483 | Msa0260610:three_prime_UTR | 35.0% |
| ! | AAAGGGGCAATAGTGTCTTT+TGG | - | chr2_2:58301191-58301210 | None:intergenic | 40.0% |
| GAATATGAAGAGGTGGAAAG+GGG | - | chr2_2:58301207-58301226 | None:intergenic | 40.0% | |
| AGGGTTTGAATATGAAGAGG+TGG | - | chr2_2:58301214-58301233 | None:intergenic | 40.0% | |
| TGTTTGTAAGCAGATGGCAA+AGG | + | chr2_2:58301539-58301558 | Msa0260610:intron | 40.0% | |
| GTTTGTAAGCAGATGGCAAA+GGG | + | chr2_2:58301540-58301559 | Msa0260610:intron | 40.0% | |
| TTCCTCAAGTCTTTGTTCTC+TGG | - | chr2_2:58301598-58301617 | None:intergenic | 40.0% | |
| GACTTGAGGAAAACAAGAAG+AGG | + | chr2_2:58301607-58301626 | Msa0260610:CDS | 40.0% | |
| GGAAAACAAGAAGAGGTTTG+AGG | + | chr2_2:58301614-58301633 | Msa0260610:CDS | 40.0% | |
| ATAGAATCCAACTAGGATCG+TGG | - | chr2_2:58302255-58302274 | None:intergenic | 40.0% | |
| CGATTCTGCACAGAGAAATA+GGG | - | chr2_2:58302563-58302582 | None:intergenic | 40.0% | |
| ACGATTCTGCACAGAGAAAT+AGG | - | chr2_2:58302564-58302583 | None:intergenic | 40.0% | |
| !! | CTAATCTTGTTCTGGAACCT+AGG | + | chr2_2:58302606-58302625 | Msa0260610:CDS | 40.0% |
| ATACGAAGGAACTGTGTTTC+TGG | - | chr2_2:58302645-58302664 | None:intergenic | 40.0% | |
| ! | GCTACTTTGATTTCATCCAG+TGG | - | chr2_2:58303193-58303212 | None:intergenic | 40.0% |
| CTCAAGAAAGAAAACGTGCT+TGG | + | chr2_2:58303218-58303237 | Msa0260610:CDS | 40.0% | |
| CAACAAGGTTAACAATGTGC+AGG | - | chr2_2:58303372-58303391 | None:intergenic | 40.0% | |
| ! | TCTTCCCAGTAGATTTTGTG+AGG | + | chr2_2:58303486-58303505 | Msa0260610:CDS | 40.0% |
| !! | TAAGCCCATTTTTATGGGCA+AGG | - | chr2_2:58303582-58303601 | None:intergenic | 40.0% |
| !! | CACCACTAAGCCCATTTTTA+TGG | - | chr2_2:58303588-58303607 | None:intergenic | 40.0% |
| ! | CATAAAAATGGGCTTAGTGG+TGG | + | chr2_2:58303586-58303605 | Msa0260610:CDS | 40.0% |
| GGTTGAAGCAGCAAGATTTA+AGG | + | chr2_2:58303669-58303688 | Msa0260610:CDS | 40.0% | |
| GTCTATCACGACAGATTGAT+TGG | - | chr2_2:58303760-58303779 | None:intergenic | 40.0% | |
| !! | AGTTTCTAGTCTTGAGGAAG+AGG | + | chr2_2:58303896-58303915 | Msa0260610:intron | 40.0% |
| AAACTAGCACATGAGACAAG+AGG | - | chr2_2:58304149-58304168 | None:intergenic | 40.0% | |
| !!! | GTCTCATGTGCTAGTTTTTG+TGG | + | chr2_2:58304152-58304171 | Msa0260610:intron | 40.0% |
| TGTCTTGTCTTGAGTGTGAA+AGG | + | chr2_2:58304283-58304302 | Msa0260610:intron | 40.0% | |
| AAGCAAGCACATACTCCATT+GGG | - | chr2_2:58304570-58304589 | None:intergenic | 40.0% | |
| AAAGCAAGCACATACTCCAT+TGG | - | chr2_2:58304571-58304590 | None:intergenic | 40.0% | |
| !! | GCAATGTTCTCTAAAACTGC+AGG | + | chr2_2:58304598-58304617 | Msa0260610:intron | 40.0% |
| AAACAAAAAACAAGTGGGCC+TGG | - | chr2_2:58304624-58304643 | None:intergenic | 40.0% | |
| ATATCATCATTCGATCCACC+TGG | - | chr2_2:58304718-58304737 | None:intergenic | 40.0% | |
| TCCTGACAATACATTACTGC+AGG | + | chr2_2:58304775-58304794 | Msa0260610:intron | 40.0% | |
| ACCTGCAGTAATGTATTGTC+AGG | - | chr2_2:58304779-58304798 | None:intergenic | 40.0% | |
| AGAAGAAATCGATGCTTTGG+TGG | + | chr2_2:58304844-58304863 | Msa0260610:CDS | 40.0% | |
| TACTGCAATTGAGCCAAAAG+AGG | + | chr2_2:58305066-58305085 | Msa0260610:CDS | 40.0% | |
| GTTGCCAAACAAGAAAAGGA+AGG | + | chr2_2:58305129-58305148 | Msa0260610:CDS | 40.0% | |
| ! | GAAGACTGACTTAGAGAAGA+AGG | + | chr2_2:58305207-58305226 | Msa0260610:CDS | 40.0% |
| AGTCTTGGAGACCAGTTAAA+AGG | + | chr2_2:58305350-58305369 | Msa0260610:exon | 40.0% | |
| ! | TCCTTGTTCCCTTGTTATGA+GGG | + | chr2_2:58305436-58305455 | Msa0260610:three_prime_UTR | 40.0% |
| !! | CATTTTAGGTCACGCCATCA+AGG | - | chr2_2:58301854-58301873 | None:intergenic | 45.0% |
| AGTTCCTTCGTATGCTGAAG+AGG | + | chr2_2:58302652-58302671 | Msa0260610:CDS | 45.0% | |
| CTTACCTCTTCAGCATACGA+AGG | - | chr2_2:58302659-58302678 | None:intergenic | 45.0% | |
| TCGTATGCTGAAGAGGTAAG+CGG | + | chr2_2:58302659-58302678 | Msa0260610:intron | 45.0% | |
| ! | TTTTGCAGGCTAGTGTTGTG+TGG | + | chr2_2:58302889-58302908 | Msa0260610:intron | 45.0% |
| GTCAAGGTCAAGTTCGTCAT+GGG | + | chr2_2:58303066-58303085 | Msa0260610:CDS | 45.0% | |
| TCAAGGTCAAGTTCGTCATG+GGG | + | chr2_2:58303067-58303086 | Msa0260610:CDS | 45.0% | |
| AAGAAAACGTGCTTGGGATG+CGG | + | chr2_2:58303225-58303244 | Msa0260610:CDS | 45.0% | |
| ! | GCCCATAAAAATGGGCTTAG+TGG | + | chr2_2:58303583-58303602 | Msa0260610:CDS | 45.0% |
| GGTCATGTCTCTAACTGATG+TGG | - | chr2_2:58304092-58304111 | None:intergenic | 45.0% | |
| AGCACATGAGACAAGAGGTA+AGG | - | chr2_2:58304144-58304163 | None:intergenic | 45.0% | |
| !!! | GTGCTAGTTTTTGTGGGTTC+AGG | + | chr2_2:58304159-58304178 | Msa0260610:intron | 45.0% |
| TGCTGAGCCACCATTTGTAA+TGG | + | chr2_2:58304232-58304251 | Msa0260610:intron | 45.0% | |
| ! | ACAAGACATCTGGAGCATGA+AGG | - | chr2_2:58304271-58304290 | None:intergenic | 45.0% |
| CACACTCAAGACAAGACATC+TGG | - | chr2_2:58304281-58304300 | None:intergenic | 45.0% | |
| ATCGATGCTTTGGTGGAAGA+CGG | + | chr2_2:58304851-58304870 | Msa0260610:CDS | 45.0% | |
| GAAGAAGGAAGAACCTGTTG+AGG | + | chr2_2:58305222-58305241 | Msa0260610:CDS | 45.0% | |
| TCGACATCAACATCCTCAAC+AGG | - | chr2_2:58305238-58305257 | None:intergenic | 45.0% | |
| AACCTGCTGCAGAAAAACCT+CGG | + | chr2_2:58305290-58305309 | Msa0260610:CDS | 45.0% | |
| !! | TTTGGAGCTCGAATTTTCCG+AGG | - | chr2_2:58305310-58305329 | None:intergenic | 45.0% |
| ! | CTCCTTGTTCCCTTGTTATG+AGG | + | chr2_2:58305435-58305454 | Msa0260610:three_prime_UTR | 45.0% |
| TCCCTCATAACAAGGGAACA+AGG | - | chr2_2:58305440-58305459 | None:intergenic | 45.0% | |
| CTATATTTGCCTGTGGGTGA+TGG | + | chr2_2:58305470-58305489 | Msa0260610:three_prime_UTR | 45.0% | |
| !! | AAATAAAGATAATATATATT+AGG | - | chr2_2:58303458-58303477 | None:intergenic | 5.0% |
| ! | GGCCGCTTCATACTTGTTAC+TGG | - | chr2_2:58301577-58301596 | None:intergenic | 50.0% |
| GGCCAGAGAACAAAGACTTG+AGG | + | chr2_2:58301593-58301612 | Msa0260610:CDS | 50.0% | |
| TGTGGTCGTGTTGTCAACTG+TGG | + | chr2_2:58302008-58302027 | Msa0260610:intron | 50.0% | |
| GTTGTCAACTGTGGTTGTCG+TGG | + | chr2_2:58302017-58302036 | Msa0260610:intron | 50.0% | |
| ATACTAGTGGTGAGGGACAC+AGG | - | chr2_2:58302336-58302355 | None:intergenic | 50.0% | |
| CAGACCTTCCACAATTGCAG+AGG | + | chr2_2:58303035-58303054 | Msa0260610:CDS | 50.0% | |
| ACCTTCCACAATTGCAGAGG+AGG | + | chr2_2:58303038-58303057 | Msa0260610:CDS | 50.0% | |
| ACCTCCTCTGCAATTGTGGA+AGG | - | chr2_2:58303042-58303061 | None:intergenic | 50.0% | |
| CTTGACCTCCTCTGCAATTG+TGG | - | chr2_2:58303046-58303065 | None:intergenic | 50.0% | |
| CACAATTGCAGAGGAGGTCA+AGG | + | chr2_2:58303044-58303063 | Msa0260610:CDS | 50.0% | |
| GGTCAAGGTCAAGTTCGTCA+TGG | + | chr2_2:58303065-58303084 | Msa0260610:CDS | 50.0% | |
| ! | AAAATGGGCTTAGTGGTGGC+TGG | + | chr2_2:58303590-58303609 | Msa0260610:CDS | 50.0% |
| !! | GTTCTCTAAAACTGCAGGCC+AGG | + | chr2_2:58304603-58304622 | Msa0260610:intron | 50.0% |
| ! | TCGAGGTGTGCATCCTCTTT+TGG | - | chr2_2:58305082-58305101 | None:intergenic | 50.0% |
| ! | CCTCTGGTTTCACTGTTTCG+AGG | - | chr2_2:58305099-58305118 | None:intergenic | 50.0% |
| CCTCGAAACAGTGAAACCAG+AGG | + | chr2_2:58305096-58305115 | Msa0260610:CDS | 50.0% | |
| ! | TTCCGAGGTTTTTCTGCAGC+AGG | - | chr2_2:58305295-58305314 | None:intergenic | 50.0% |
| ATCTCTTAGCCATCACCCAC+AGG | - | chr2_2:58305482-58305501 | None:intergenic | 50.0% | |
| TGCAGAGGAGGTCAAGGTCA+AGG | + | chr2_2:58303050-58303069 | Msa0260610:CDS | 55.0% | |
| GGTCAAGTTCGTCATGGGGA+AGG | + | chr2_2:58303071-58303090 | Msa0260610:CDS | 55.0% | |
| CAAGTTCGTCATGGGGAAGG+TGG | + | chr2_2:58303074-58303093 | Msa0260610:intron | 55.0% | |
| TCAGTTACGCTTACGCTGCG+AGG | + | chr2_2:58303167-58303186 | Msa0260610:intron | 55.0% | |
| GGCAACTTTGTAGCTGCCTC+TGG | - | chr2_2:58305115-58305134 | None:intergenic | 55.0% | |
| GTTGCGGCCACGATCCTAGT+TGG | + | chr2_2:58302245-58302264 | Msa0260610:intron | 60.0% | |
| GGATCGTGGCCGCAACGTCA+AGG | - | chr2_2:58302241-58302260 | None:intergenic | 65.0% | |
| !! | CTGGCACGAGAAGAGCGCCT+AGG | - | chr2_2:58302626-58302645 | None:intergenic | 65.0% |
| ACGTGCTTGGGATGCGGCAG+AGG | + | chr2_2:58303231-58303250 | Msa0260610:CDS | 65.0% | |
| GGGCTTAGTGGTGGCTGGAG+AGG | + | chr2_2:58303595-58303614 | Msa0260610:CDS | 65.0% | |
| CGCTTACGCTGCGAGGCCAC+TGG | + | chr2_2:58303174-58303193 | Msa0260610:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 58301184 | 58305595 | 58301184 | ID=Msa0260610;Name=Msa0260610 |
| chr2_2 | mRNA | 58301184 | 58305595 | 58301184 | ID=Msa0260610-mRNA-1;Parent=Msa0260610;Name=Msa0260610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|0.71|0.87|8|244|412 |
| chr2_2 | exon | 58301184 | 58301286 | 58301184 | ID=Msa0260610-mRNA-1:exon:17864;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58301552 | 58301635 | 58301552 | ID=Msa0260610-mRNA-1:exon:17865;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58302427 | 58302492 | 58302427 | ID=Msa0260610-mRNA-1:exon:17866;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58302578 | 58302673 | 58302578 | ID=Msa0260610-mRNA-1:exon:17867;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58303028 | 58303092 | 58303028 | ID=Msa0260610-mRNA-1:exon:17868;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58303171 | 58303336 | 58303171 | ID=Msa0260610-mRNA-1:exon:17869;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58303484 | 58303690 | 58303484 | ID=Msa0260610-mRNA-1:exon:17870;Parent=Msa0260610-mRNA-1 |
| chr2_2 | exon | 58304797 | 58305595 | 58304797 | ID=Msa0260610-mRNA-1:exon:17871;Parent=Msa0260610-mRNA-1 |
| chr2_2 | five_prime_UTR | 58301184 | 58301286 | 58301184 | ID=Msa0260610-mRNA-1:five_prime_utr;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58301552 | 58301635 | 58301552 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58302427 | 58302492 | 58302427 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58302578 | 58302673 | 58302578 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58303028 | 58303092 | 58303028 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58303171 | 58303336 | 58303171 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58303484 | 58303690 | 58303484 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | CDS | 58304797 | 58305351 | 58304797 | ID=Msa0260610-mRNA-1:cds;Parent=Msa0260610-mRNA-1 |
| chr2_2 | three_prime_UTR | 58305352 | 58305595 | 58305352 | ID=Msa0260610-mRNA-1:three_prime_utr;Parent=Msa0260610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
