Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006721.t1 | XP_004293968.1 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 1.20E-96 | 362.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006721.t1 | P46287 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.8e-99 | 362.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006721.t1 | A0A0S3SAC0 | 98.9 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 1.9e-96 | 361.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006721.t1 | MTR_8g046140 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 1.44e-132 | 369 |
| MS.gene006721.t1 | MTR_4g080740 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 1.77e-132 | 368 |
| MS.gene006721.t1 | MTR_3g007700 | 99.441 | 179 | 1 | 0 | 3 | 181 | 4 | 182 | 3.84e-132 | 367 |
| MS.gene006721.t1 | MTR_3g007690 | 80.663 | 181 | 33 | 2 | 2 | 180 | 61 | 241 | 1.63e-101 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006721.t1 | AT2G42740 | 95.580 | 181 | 8 | 0 | 1 | 181 | 1 | 181 | 4.92e-129 | 360 |
| MS.gene006721.t1 | AT5G45775 | 95.028 | 181 | 9 | 0 | 1 | 181 | 1 | 181 | 2.14e-128 | 358 |
| MS.gene006721.t1 | AT4G18730 | 95.028 | 181 | 9 | 0 | 1 | 181 | 1 | 181 | 2.14e-128 | 358 |
| MS.gene006721.t1 | AT3G58700 | 95.028 | 181 | 9 | 0 | 1 | 181 | 1 | 181 | 2.14e-128 | 358 |
| MS.gene006721.t1 | AT5G45775 | 95.322 | 171 | 8 | 0 | 11 | 181 | 1 | 171 | 9.31e-121 | 338 |
Find 55 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCCTTCTACTGGTATTTA+TGG | 0.148591 | 4.1:+26018139 | MS.gene006721:CDS |
| AATGGATTTCTTTGTTGTTC+TGG | 0.273830 | 4.1:+26018162 | MS.gene006721:CDS |
| TTGCTTTGGATTTGGTATTC+AGG | 0.280202 | 4.1:+26017646 | MS.gene006721:CDS |
| TTCAGTGATACTGGTTGCTT+TGG | 0.301811 | 4.1:+26017632 | MS.gene006721:CDS |
| TATTCAGGAGCATATTGATT+TGG | 0.317273 | 4.1:+26017661 | MS.gene006721:CDS |
| TGACAAGGCAATGCAGCTTT+TGG | 0.318529 | 4.1:+26017565 | MS.gene006721:CDS |
| TGAACCTTGATCTCCCTCAT+TGG | 0.332362 | 4.1:-26016624 | None:intergenic |
| ATTCAGGAGCATATTGATTT+GGG | 0.344346 | 4.1:+26017662 | MS.gene006721:CDS |
| AGGAGGAACTTCAGTGATAC+TGG | 0.352064 | 4.1:+26017623 | MS.gene006721:CDS |
| GAACCTTGATCTCCCTCATT+GGG | 0.354507 | 4.1:-26016623 | None:intergenic |
| ATTCCATAAATACCAGTAGA+AGG | 0.360196 | 4.1:-26018142 | None:intergenic |
| CAATTGCCTGGGATTTGTTA+AGG | 0.361161 | 4.1:-26018303 | None:intergenic |
| GATACTGGTTGCTTTGGATT+TGG | 0.362752 | 4.1:+26017638 | MS.gene006721:CDS |
| TTTGACCTGGAACCACTTCA+TGG | 0.374960 | 4.1:-26018266 | None:intergenic |
| TGATGCCATGAAGTGGTTCC+AGG | 0.388963 | 4.1:+26018261 | MS.gene006721:CDS |
| TGGGTTCGCCAGTTTCTTCT+CGG | 0.418287 | 4.1:-26016604 | None:intergenic |
| AGGTACACTGTGCGATCCTT+TGG | 0.421779 | 4.1:+26017497 | MS.gene006721:CDS |
| CAACACGGGCCTTGCATCTA+CGG | 0.426608 | 4.1:-26018213 | None:intergenic |
| GGAGAGTGGTTTAAAGGTGA+AGG | 0.433325 | 4.1:+26017586 | MS.gene006721:CDS |
| AATGGCTTCCGAGAAGAAAC+TGG | 0.445897 | 4.1:+26016596 | None:intergenic |
| TTCTACTGGTATTTATGGAA+TGG | 0.448616 | 4.1:+26018144 | MS.gene006721:CDS |
| CTCATTTCTTCTGATTCCAA+AGG | 0.457634 | 4.1:-26017513 | None:intergenic |
| AGTTTAACTAAACAATTGCC+TGG | 0.470565 | 4.1:-26018315 | None:intergenic |
| TTTGTTGTTCTGGAACGTCC+TGG | 0.481018 | 4.1:+26018172 | MS.gene006721:CDS |
| TCCAGGTATGACCCTTCTAC+TGG | 0.482968 | 4.1:+26018130 | MS.gene006721:intron |
| CGACGACCCACACGATAACC+AGG | 0.522163 | 4.1:-26018190 | None:intergenic |
| GTGGTTCCAGGTCAAATATG+AGG | 0.522922 | 4.1:+26018273 | MS.gene006721:CDS |
| AACATCTCCGTCGGTGAGAG+TGG | 0.528749 | 4.1:+26016660 | MS.gene006721:CDS |
| GAACGTCCTGGTTATCGTGT+GGG | 0.532113 | 4.1:+26018184 | MS.gene006721:CDS |
| GAACCCAATGAGGGAGATCA+AGG | 0.532538 | 4.1:+26016620 | MS.gene006721:CDS |
| TAGGTGCTGGAACAACTTAG+TGG | 0.535243 | 4.1:+26016801 | MS.gene006721:intron |
| AACTAACCTTTGGAGAACAC+TGG | 0.544806 | 4.1:-26016831 | None:intergenic |
| GGAACGTCCTGGTTATCGTG+TGG | 0.550259 | 4.1:+26018183 | MS.gene006721:CDS |
| GTTTAACTAAACAATTGCCT+GGG | 0.556618 | 4.1:-26018314 | None:intergenic |
| TCGTCTCACCAGAGCTGCAA+AGG | 0.558754 | 4.1:+26016686 | MS.gene006721:CDS |
| ACTAACCTTTGGAGAACACT+GGG | 0.563850 | 4.1:-26016830 | None:intergenic |
| TGGCATCATCCTTCGTGACA+CGG | 0.570122 | 4.1:-26018246 | None:intergenic |
| GGGTCGTCGCCGTAGATGCA+AGG | 0.575968 | 4.1:+26018204 | MS.gene006721:CDS |
| CGTAGATGCAAGGCCCGTGT+TGG | 0.590250 | 4.1:+26018214 | MS.gene006721:CDS |
| CTCGTTCTCAACATCTCCGT+CGG | 0.591586 | 4.1:+26016651 | MS.gene006721:CDS |
| TTCCATAAATACCAGTAGAA+GGG | 0.597500 | 4.1:-26018141 | None:intergenic |
| CACGGTGTTGAATTCCAACA+CGG | 0.601715 | 4.1:-26018228 | None:intergenic |
| CGAAGGATGATGCCATGAAG+TGG | 0.606576 | 4.1:+26018254 | MS.gene006721:CDS |
| AGTGATCCTTAACAAATCCC+AGG | 0.615373 | 4.1:+26018297 | MS.gene006721:CDS |
| TGTTACTGTCAGAGGTGACA+AGG | 0.617824 | 4.1:+26017550 | MS.gene006721:CDS |
| TCACTCCCTCATATTTGACC+TGG | 0.621443 | 4.1:-26018279 | None:intergenic |
| TGGTTCCAGGTCAAATATGA+GGG | 0.622773 | 4.1:+26018274 | MS.gene006721:CDS |
| GCATGCTATGTTACTGTCAG+AGG | 0.636257 | 4.1:+26017542 | MS.gene006721:CDS |
| CAAACCCCAGTGTTCTCCAA+AGG | 0.636410 | 4.1:+26016825 | MS.gene006721:CDS |
| GAAACTGGCGAACCCAATGA+GGG | 0.640398 | 4.1:+26016611 | MS.gene006721:CDS |
| ACGATCTCCACTCTCACCGA+CGG | 0.655877 | 4.1:-26016667 | None:intergenic |
| AGAAACTGGCGAACCCAATG+AGG | 0.672801 | 4.1:+26016610 | MS.gene006721:CDS |
| ACGGTGTTGAATTCCAACAC+GGG | 0.675200 | 4.1:-26018227 | None:intergenic |
| AATTCAACACCGTGTCACGA+AGG | 0.700404 | 4.1:+26018237 | MS.gene006721:CDS |
| CTAACCTTTGGAGAACACTG+GGG | 0.723201 | 4.1:-26016829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTATTGAAACATTAT+TGG | + | chr4.1:26018085-26018104 | MS.gene006721:intron | 10.0% |
| !! | TATTATATAATCTTATAAAC+TGG | + | chr4.1:26017411-26017430 | MS.gene006721:intron | 10.0% |
| !!! | AATTACATGTTTATTTTTAT+AGG | + | chr4.1:26016921-26016940 | MS.gene006721:intron | 10.0% |
| !!! | ACAAATATTTTCTATTAATT+TGG | - | chr4.1:26017818-26017837 | None:intergenic | 10.0% |
| !!! | ATAAACTTTATTATCAATTT+TGG | + | chr4.1:26016947-26016966 | MS.gene006721:intron | 10.0% |
| !!! | TAAACTTTATTATCAATTTT+GGG | + | chr4.1:26016948-26016967 | MS.gene006721:intron | 10.0% |
| !! | AAAATAAATCCAAAAAAGAA+AGG | - | chr4.1:26018023-26018042 | None:intergenic | 15.0% |
| !!! | ATAATAAAGTTTGCTTTATA+TGG | + | chr4.1:26017874-26017893 | MS.gene006721:intron | 15.0% |
| !!! | ATATATTTTTTTTGTGTTGT+AGG | + | chr4.1:26016782-26016801 | MS.gene006721:intron | 15.0% |
| !! | AAAGAAATGAAAGATGTTTA+CGG | + | chr4.1:26017281-26017300 | MS.gene006721:intron | 20.0% |
| !! | AAATTGCAAAAACAGATAAT+TGG | - | chr4.1:26017969-26017988 | None:intergenic | 20.0% |
| !! | CATATAATATTGGATAAATG+TGG | + | chr4.1:26017438-26017457 | MS.gene006721:intron | 20.0% |
| !! | TATGAAATCAAACATTTATG+AGG | - | chr4.1:26018053-26018072 | None:intergenic | 20.0% |
| !! | TCAGACAAAAAAATTAACTT+GGG | + | chr4.1:26017022-26017041 | MS.gene006721:intron | 20.0% |
| !! | TTCAGACAAAAAAATTAACT+TGG | + | chr4.1:26017021-26017040 | MS.gene006721:intron | 20.0% |
| !!! | TAGTTTGATTTTGTAGTTAT+TGG | + | chr4.1:26017149-26017168 | MS.gene006721:intron | 20.0% |
| !!! | TCTAATTTAGGGTTAATTAT+GGG | + | chr4.1:26017058-26017077 | MS.gene006721:intron | 20.0% |
| !!! | TTTTGTAGAAATTTATCACT+GGG | + | chr4.1:26016852-26016871 | MS.gene006721:intron | 20.0% |
| ! | AACTGGCTATCATATAATAT+TGG | + | chr4.1:26017428-26017447 | MS.gene006721:intron | 25.0% |
| ! | ATTTCTACAAAACTAACCTT+TGG | - | chr4.1:26016844-26016863 | None:intergenic | 25.0% |
| ! | TTGGTATGTAGTCTAATTTA+GGG | + | chr4.1:26017047-26017066 | MS.gene006721:intron | 25.0% |
| ! | TTTATTATTCCTTGCTTTGT+TGG | + | chr4.1:26017846-26017865 | MS.gene006721:intron | 25.0% |
| !! | AATGTGAAAGCTTGATAATA+GGG | + | chr4.1:26017117-26017136 | MS.gene006721:intron | 25.0% |
| !! | CAGACAAAAAAATTAACTTG+GGG | + | chr4.1:26017023-26017042 | MS.gene006721:intron | 25.0% |
| !! | GTCTAATTTAGGGTTAATTA+TGG | + | chr4.1:26017057-26017076 | MS.gene006721:intron | 25.0% |
| !! | GTTTTGTAGAAATTTATCAC+TGG | + | chr4.1:26016851-26016870 | MS.gene006721:intron | 25.0% |
| !!! | GTACATTAGATTTTTTAGCA+TGG | - | chr4.1:26017368-26017387 | None:intergenic | 25.0% |
| !!! | TAGTTATTGGTAATGATGAA+AGG | + | chr4.1:26017162-26017181 | MS.gene006721:intron | 25.0% |
| AAATCCAAAAAAGAAAGGCA+TGG | - | chr4.1:26018018-26018037 | None:intergenic | 30.0% | |
| AAATTGTGGTAAGGTTGTTA+CGG | + | chr4.1:26017201-26017220 | MS.gene006721:intron | 30.0% | |
| ATTCCATAAATACCAGTAGA+AGG | - | chr4.1:26018145-26018164 | None:intergenic | 30.0% | |
| CATTACACTTTCAAATCACT+AGG | - | chr4.1:26016998-26017017 | None:intergenic | 30.0% | |
| CTTGGTATGTAGTCTAATTT+AGG | + | chr4.1:26017046-26017065 | MS.gene006721:intron | 30.0% | |
| TGAACTTGTGACTAAAATTG+TGG | + | chr4.1:26017187-26017206 | MS.gene006721:intron | 30.0% | |
| TTCCATAAATACCAGTAGAA+GGG | - | chr4.1:26018144-26018163 | None:intergenic | 30.0% | |
| TTCTACTGGTATTTATGGAA+TGG | + | chr4.1:26018144-26018163 | MS.gene006721:CDS | 30.0% | |
| TTGTGACTAAAATTGTGGTA+AGG | + | chr4.1:26017192-26017211 | MS.gene006721:intron | 30.0% | |
| ! | AAAAAAATTAACTTGGGGCT+TGG | + | chr4.1:26017028-26017047 | MS.gene006721:intron | 30.0% |
| ! | CAATGTGAAAGCTTGATAAT+AGG | + | chr4.1:26017116-26017135 | MS.gene006721:intron | 30.0% |
| ! | CATTTCTTTTCTTACATGTG+TGG | - | chr4.1:26017270-26017289 | None:intergenic | 30.0% |
| ! | CTGTCAGAGATTAACATTTT+AGG | + | chr4.1:26017737-26017756 | MS.gene006721:intron | 30.0% |
| ! | TATTCAGGAGCATATTGATT+TGG | + | chr4.1:26017661-26017680 | MS.gene006721:CDS | 30.0% |
| !! | AATGGATTTCTTTGTTGTTC+TGG | + | chr4.1:26018162-26018181 | MS.gene006721:CDS | 30.0% |
| !! | ATTCAGGAGCATATTGATTT+GGG | + | chr4.1:26017662-26017681 | MS.gene006721:CDS | 30.0% |
| !!! | GATTTTTTAGCATGGAAACT+AGG | - | chr4.1:26017360-26017379 | None:intergenic | 30.0% |
| AATTGTGGTAAGGTTGTTAC+GGG | + | chr4.1:26017202-26017221 | MS.gene006721:intron | 35.0% | |
| ACCTCGCTGTAAAAATTCAA+AGG | - | chr4.1:26017481-26017500 | None:intergenic | 35.0% | |
| CTCATTTCTTCTGATTCCAA+AGG | - | chr4.1:26017516-26017535 | None:intergenic | 35.0% | |
| GTAAGCTTAAGAACAACTCT+TGG | + | chr4.1:26017691-26017710 | MS.gene006721:intron | 35.0% | |
| TGACATAGATTGTGTACTTG+TGG | + | chr4.1:26017777-26017796 | MS.gene006721:intron | 35.0% | |
| TTATATGCACCAACAAAGCA+AGG | - | chr4.1:26017858-26017877 | None:intergenic | 35.0% | |
| ! | CAGAGATTAACATTTTAGGC+AGG | + | chr4.1:26017741-26017760 | MS.gene006721:intron | 35.0% |
| ! | GGTAATGAGTGTGGATTTTA+GGG | + | chr4.1:26016890-26016909 | MS.gene006721:intron | 35.0% |
| ! | GTTTGCTTTATATGGTCTTG+AGG | + | chr4.1:26017882-26017901 | MS.gene006721:intron | 35.0% |
| ! | TCCTTTGAATTTTTACAGCG+AGG | + | chr4.1:26017477-26017496 | MS.gene006721:intron | 35.0% |
| ! | TTATATGGTCTTGAGGAACA+AGG | + | chr4.1:26017889-26017908 | MS.gene006721:intron | 35.0% |
| ! | TTGCTTTGGATTTGGTATTC+AGG | + | chr4.1:26017646-26017665 | MS.gene006721:CDS | 35.0% |
| !! | TGAAGGAGTATGAACTTTTG+AGG | + | chr4.1:26017603-26017622 | MS.gene006721:CDS | 35.0% |
| !! | TGGTAATGAGTGTGGATTTT+AGG | + | chr4.1:26016889-26016908 | MS.gene006721:intron | 35.0% |
| !!! | TTTTTTTGTGTTGTAGGTGC+TGG | + | chr4.1:26016788-26016807 | MS.gene006721:intron | 35.0% |
| ACTGGGTTCTTATGTAATGC+TGG | + | chr4.1:26016869-26016888 | MS.gene006721:intron | 40.0% | |
| AGTGATCCTTAACAAATCCC+AGG | + | chr4.1:26018297-26018316 | MS.gene006721:CDS | 40.0% | |
| GACCCTTCTACTGGTATTTA+TGG | + | chr4.1:26018139-26018158 | MS.gene006721:CDS | 40.0% | |
| TGGTTCCAGGTCAAATATGA+GGG | + | chr4.1:26018274-26018293 | MS.gene006721:CDS | 40.0% | |
| ! | AACTAACCTTTGGAGAACAC+TGG | - | chr4.1:26016834-26016853 | None:intergenic | 40.0% |
| ! | ACTAACCTTTGGAGAACACT+GGG | - | chr4.1:26016833-26016852 | None:intergenic | 40.0% |
| ! | GATACTGGTTGCTTTGGATT+TGG | + | chr4.1:26017638-26017657 | MS.gene006721:CDS | 40.0% |
| ! | TGTAATGCTGGTAATGAGTG+TGG | + | chr4.1:26016881-26016900 | MS.gene006721:intron | 40.0% |
| ! | TTCAGTGATACTGGTTGCTT+TGG | + | chr4.1:26017632-26017651 | MS.gene006721:CDS | 40.0% |
| !! | AGGAGTATGAACTTTTGAGG+AGG | + | chr4.1:26017606-26017625 | MS.gene006721:CDS | 40.0% |
| !! | CAATTGCCTGGGATTTGTTA+AGG | - | chr4.1:26018306-26018325 | None:intergenic | 40.0% |
| !! | GCTTTTGGAGAGTGGTTTAA+AGG | + | chr4.1:26017580-26017599 | MS.gene006721:CDS | 40.0% |
| !!! | ACTGCCATGCCTTTCTTTTT+TGG | + | chr4.1:26018011-26018030 | MS.gene006721:intron | 40.0% |
| AACAAGGACTTGTGTAGGCT+AGG | + | chr4.1:26017905-26017924 | MS.gene006721:intron | 45.0% | |
| AACTCAGATCCAGTGAGAAG+AGG | - | chr4.1:26016720-26016739 | None:intergenic | 45.0% | |
| AAGGTTGTTACGGGTCTTAG+AGG | + | chr4.1:26017211-26017230 | MS.gene006721:intron | 45.0% | |
| AATTCAACACCGTGTCACGA+AGG | + | chr4.1:26018237-26018256 | MS.gene006721:CDS | 45.0% | |
| ACTCAGATCCAGTGAGAAGA+GGG | - | chr4.1:26016719-26016738 | None:intergenic | 45.0% | |
| AGGAGGAACTTCAGTGATAC+TGG | + | chr4.1:26017623-26017642 | MS.gene006721:CDS | 45.0% | |
| GAACCTTGATCTCCCTCATT+GGG | - | chr4.1:26016626-26016645 | None:intergenic | 45.0% | |
| GCATGCTATGTTACTGTCAG+AGG | + | chr4.1:26017542-26017561 | MS.gene006721:CDS | 45.0% | |
| GGAGAGTGGTTTAAAGGTGA+AGG | + | chr4.1:26017586-26017605 | MS.gene006721:CDS | 45.0% | |
| GGTAAAAACCTTTGCAGCTC+TGG | - | chr4.1:26016697-26016716 | None:intergenic | 45.0% | |
| GTGGTTCCAGGTCAAATATG+AGG | + | chr4.1:26018273-26018292 | MS.gene006721:CDS | 45.0% | |
| GTTACGGGTCTTAGAGGAAT+AGG | + | chr4.1:26017217-26017236 | MS.gene006721:intron | 45.0% | |
| TCACTCCCTCATATTTGACC+TGG | - | chr4.1:26018282-26018301 | None:intergenic | 45.0% | |
| TGAACCTTGATCTCCCTCAT+TGG | - | chr4.1:26016627-26016646 | None:intergenic | 45.0% | |
| TGAGGAACAAGGACTTGTGT+AGG | + | chr4.1:26017900-26017919 | MS.gene006721:intron | 45.0% | |
| TGTTACTGTCAGAGGTGACA+AGG | + | chr4.1:26017550-26017569 | MS.gene006721:CDS | 45.0% | |
| TTTGACCTGGAACCACTTCA+TGG | - | chr4.1:26018269-26018288 | None:intergenic | 45.0% | |
| ! | ACGGTGTTGAATTCCAACAC+GGG | - | chr4.1:26018230-26018249 | None:intergenic | 45.0% |
| ! | CACGGTGTTGAATTCCAACA+CGG | - | chr4.1:26018231-26018250 | None:intergenic | 45.0% |
| ! | CTAACCTTTGGAGAACACTG+GGG | - | chr4.1:26016832-26016851 | None:intergenic | 45.0% |
| ! | GTCGGTGTACTTGAGCATTT+TGG | + | chr4.1:26017314-26017333 | MS.gene006721:intron | 45.0% |
| ! | GTTTACGGTCTTCGACTTGT+CGG | + | chr4.1:26017296-26017315 | MS.gene006721:intron | 45.0% |
| ! | GTTTTTACCCCTCTTCTCAC+TGG | + | chr4.1:26016708-26016727 | MS.gene006721:intron | 45.0% |
| ! | TGACAAGGCAATGCAGCTTT+TGG | + | chr4.1:26017565-26017584 | MS.gene006721:CDS | 45.0% |
| !! | TAGGTGCTGGAACAACTTAG+TGG | + | chr4.1:26016801-26016820 | MS.gene006721:intron | 45.0% |
| !! | TTTGTTGTTCTGGAACGTCC+TGG | + | chr4.1:26018172-26018191 | MS.gene006721:CDS | 45.0% |
| ACCAGTAGAAGGGTCATACC+TGG | - | chr4.1:26018134-26018153 | None:intergenic | 50.0% | |
| AGAAACTGGCGAACCCAATG+AGG | + | chr4.1:26016610-26016629 | MS.gene006721:CDS | 50.0% | |
| AGGTACACTGTGCGATCCTT+TGG | + | chr4.1:26017497-26017516 | MS.gene006721:CDS | 50.0% | |
| CAAACCCCAGTGTTCTCCAA+AGG | + | chr4.1:26016825-26016844 | MS.gene006721:CDS | 50.0% | |
| CGAAGGATGATGCCATGAAG+TGG | + | chr4.1:26018254-26018273 | MS.gene006721:CDS | 50.0% | |
| CTCAGATCCAGTGAGAAGAG+GGG | - | chr4.1:26016718-26016737 | None:intergenic | 50.0% | |
| CTCGTTCTCAACATCTCCGT+CGG | + | chr4.1:26016651-26016670 | MS.gene006721:CDS | 50.0% | |
| GAAACTGGCGAACCCAATGA+GGG | + | chr4.1:26016611-26016630 | MS.gene006721:CDS | 50.0% | |
| GAACCCAATGAGGGAGATCA+AGG | + | chr4.1:26016620-26016639 | MS.gene006721:CDS | 50.0% | |
| GAACGTCCTGGTTATCGTGT+GGG | + | chr4.1:26018184-26018203 | MS.gene006721:CDS | 50.0% | |
| GAGCAGATTGTCAAGCGTCA+GGG | - | chr4.1:26018112-26018131 | None:intergenic | 50.0% | |
| TCCAGGTATGACCCTTCTAC+TGG | + | chr4.1:26018130-26018149 | MS.gene006721:intron | 50.0% | |
| TGATGCCATGAAGTGGTTCC+AGG | + | chr4.1:26018261-26018280 | MS.gene006721:CDS | 50.0% | |
| TGGCATCATCCTTCGTGACA+CGG | - | chr4.1:26018249-26018268 | None:intergenic | 50.0% | |
| TGGGTTCGCCAGTTTCTTCT+CGG | - | chr4.1:26016607-26016626 | None:intergenic | 50.0% | |
| !! | GCAATGCAGCTTTTGGAGAG+TGG | + | chr4.1:26017572-26017591 | MS.gene006721:CDS | 50.0% |
| AACATCTCCGTCGGTGAGAG+TGG | + | chr4.1:26016660-26016679 | MS.gene006721:CDS | 55.0% | |
| ACGATCTCCACTCTCACCGA+CGG | - | chr4.1:26016670-26016689 | None:intergenic | 55.0% | |
| CAACACGGGCCTTGCATCTA+CGG | - | chr4.1:26018216-26018235 | None:intergenic | 55.0% | |
| GACGCTTGACAATCTGCTCC+AGG | + | chr4.1:26018113-26018132 | MS.gene006721:intron | 55.0% | |
| GGAACGTCCTGGTTATCGTG+TGG | + | chr4.1:26018183-26018202 | MS.gene006721:CDS | 55.0% | |
| GGAGCAGATTGTCAAGCGTC+AGG | - | chr4.1:26018113-26018132 | None:intergenic | 55.0% | |
| TCGTCTCACCAGAGCTGCAA+AGG | + | chr4.1:26016686-26016705 | MS.gene006721:CDS | 55.0% | |
| CGACGACCCACACGATAACC+AGG | - | chr4.1:26018193-26018212 | None:intergenic | 60.0% | |
| CGTAGATGCAAGGCCCGTGT+TGG | + | chr4.1:26018214-26018233 | MS.gene006721:CDS | 60.0% | |
| GGGTCGTCGCCGTAGATGCA+AGG | + | chr4.1:26018204-26018223 | MS.gene006721:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 26016597 | 26018330 | 26016597 | ID=MS.gene006721 |
| chr4.1 | mRNA | 26016597 | 26018330 | 26016597 | ID=MS.gene006721.t1;Parent=MS.gene006721 |
| chr4.1 | exon | 26016597 | 26016707 | 26016597 | ID=MS.gene006721.t1.exon1;Parent=MS.gene006721.t1 |
| chr4.1 | CDS | 26016597 | 26016707 | 26016597 | ID=cds.MS.gene006721.t1;Parent=MS.gene006721.t1 |
| chr4.1 | exon | 26016804 | 26016846 | 26016804 | ID=MS.gene006721.t1.exon2;Parent=MS.gene006721.t1 |
| chr4.1 | CDS | 26016804 | 26016846 | 26016804 | ID=cds.MS.gene006721.t1;Parent=MS.gene006721.t1 |
| chr4.1 | exon | 26017495 | 26017690 | 26017495 | ID=MS.gene006721.t1.exon3;Parent=MS.gene006721.t1 |
| chr4.1 | CDS | 26017495 | 26017690 | 26017495 | ID=cds.MS.gene006721.t1;Parent=MS.gene006721.t1 |
| chr4.1 | exon | 26018135 | 26018330 | 26018135 | ID=MS.gene006721.t1.exon4;Parent=MS.gene006721.t1 |
| chr4.1 | CDS | 26018135 | 26018330 | 26018135 | ID=cds.MS.gene006721.t1;Parent=MS.gene006721.t1 |
| Gene Sequence |
| Protein sequence |