AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020721

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020721.t1 MTR_5g094760 96.825 504 16 0 1 504 1 504 0.0 993
MS.gene020721.t1 MTR_7g091690 92.262 504 39 0 1 504 1 504 0.0 927
MS.gene020721.t1 MTR_0204s0020 84.049 489 78 0 11 499 5 493 0.0 848
MS.gene020721.t1 MTR_0204s0020 83.436 489 78 1 11 499 5 490 0.0 837
MS.gene020721.t1 MTR_4g116770 79.523 503 101 1 1 501 197 699 0.0 827
MS.gene020721.t1 MTR_0204s0040 79.523 503 101 1 1 501 1 503 0.0 825
MS.gene020721.t1 MTR_4g116790 80.080 497 98 1 9 504 8 504 0.0 812
MS.gene020721.t1 MTR_5g006070 58.859 491 197 4 19 504 14 504 0.0 618
MS.gene020721.t1 MTR_6g087040 57.822 505 210 3 1 503 1 504 0.0 615
MS.gene020721.t1 MTR_6g088375 57.822 505 210 3 1 503 1 504 0.0 615
MS.gene020721.t1 MTR_3g008160 58.025 486 201 3 19 501 15 500 0.0 605
MS.gene020721.t1 MTR_8g102860 58.300 494 202 3 14 504 13 505 0.0 603
MS.gene020721.t1 MTR_1g104770 57.000 500 206 5 1 495 1 496 0.0 599
MS.gene020721.t1 MTR_1g104750 55.912 499 212 5 1 495 1 495 0.0 587
MS.gene020721.t1 MTR_4g116790 78.492 358 76 1 9 365 8 365 0.0 587
MS.gene020721.t1 MTR_1g104780 58.200 500 199 6 1 495 1 495 0.0 573
MS.gene020721.t1 MTR_5g006070 58.333 456 185 4 54 504 1 456 0.0 569
MS.gene020721.t1 MTR_5g082540 55.010 489 215 3 11 495 7 494 0.0 563
MS.gene020721.t1 MTR_3g008170 54.658 483 215 4 20 498 16 498 0.0 556
MS.gene020721.t1 MTR_3g008160 57.206 451 190 3 54 501 1 451 0.0 555
MS.gene020721.t1 MTR_5g041550 55.600 500 212 4 1 494 1 496 0.0 553
MS.gene020721.t1 MTR_0009s0370 55.488 492 211 4 9 494 5 494 0.0 552
MS.gene020721.t1 MTR_1g038630 54.418 498 218 4 1 494 1 493 0.0 551
MS.gene020721.t1 MTR_8g102860 58.150 454 186 3 54 504 1 453 0.0 551
MS.gene020721.t1 MTR_3g093010 54.890 501 215 4 1 495 1 496 0.0 543
MS.gene020721.t1 MTR_4g091370 57.588 481 199 3 19 494 15 495 0.0 531
MS.gene020721.t1 MTR_3g023480 51.904 499 230 4 14 504 8 504 0.0 525
MS.gene020721.t1 MTR_1g038600 52.286 503 217 5 1 501 1 482 0.0 523
MS.gene020721.t1 MTR_3g074390 51.566 479 227 4 21 495 22 499 2.01e-177 508
MS.gene020721.t1 MTR_4g090600 56.557 488 207 3 19 501 15 502 4.49e-176 505
MS.gene020721.t1 MTR_3g074410 50.501 499 238 6 1 494 1 495 6.25e-176 504
MS.gene020721.t1 MTR_3g007910 50.902 499 206 5 1 495 1 464 1.13e-174 500
MS.gene020721.t1 MTR_3g093060 54.911 448 195 3 54 494 1 448 1.91e-171 491
MS.gene020721.t1 MTR_3g074270 48.992 496 229 5 1 495 1 473 1.56e-166 479
MS.gene020721.t1 MTR_3g074380 50.681 367 177 4 1 365 1 365 3.69e-120 357
MS.gene020721.t1 MTR_3g074320 48.867 309 153 4 191 495 20 327 4.67e-106 320
MS.gene020721.t1 MTR_3g074370 48.544 309 154 4 191 495 20 327 1.26e-105 319
MS.gene020721.t1 MTR_3g074340 48.544 309 154 4 191 495 20 327 1.80e-105 318
MS.gene020721.t1 MTR_3g074400 38.616 448 222 9 54 479 1 417 7.20e-93 289
MS.gene020721.t1 MTR_6g088450 29.046 482 301 14 12 478 45 500 4.11e-57 198
MS.gene020721.t1 MTR_3g084110 27.515 487 320 9 17 491 13 478 1.06e-51 183
MS.gene020721.t1 MTR_8g103500 27.642 492 310 10 12 484 3 467 4.62e-51 181
MS.gene020721.t1 MTR_4g069500 25.911 494 324 9 20 492 23 495 2.31e-48 175
MS.gene020721.t1 MTR_7g005910 26.582 474 317 10 26 491 32 482 3.95e-48 174
MS.gene020721.t1 MTR_4g077740 29.167 504 305 11 7 484 19 496 6.18e-48 173
MS.gene020721.t1 MTR_4g072030 27.143 490 303 13 30 490 29 493 6.96e-48 173
MS.gene020721.t1 MTR_1g116650 28.151 476 295 10 26 491 77 515 7.01e-47 171
MS.gene020721.t1 MTR_5g096000 47.668 193 78 2 1 193 1 170 8.29e-47 165
MS.gene020721.t1 MTR_5g096000 53.333 135 62 1 361 495 162 295 8.15e-37 138
MS.gene020721.t1 MTR_1g116660 25.979 485 330 10 17 491 20 485 7.58e-46 167
MS.gene020721.t1 MTR_4g069500 26.444 450 301 8 64 492 5 445 9.31e-46 166
MS.gene020721.t1 MTR_7g446340 24.746 493 333 9 11 491 39 505 2.43e-44 164
MS.gene020721.t1 MTR_6g007340 24.746 493 333 9 11 491 39 505 2.43e-44 164
MS.gene020721.t1 MTR_5g075300 26.378 508 325 12 7 491 4 485 2.45e-43 160
MS.gene020721.t1 MTR_8g077890 27.846 492 309 11 24 491 16 485 3.57e-43 160
MS.gene020721.t1 MTR_3g116240 26.971 482 301 12 30 484 30 487 5.47e-43 160
MS.gene020721.t1 MTR_1g038620 46.203 158 68 1 206 363 50 190 9.03e-43 150
MS.gene020721.t1 MTR_1g022315 29.397 398 268 5 97 489 1 390 1.56e-41 153
MS.gene020721.t1 MTR_6g018790 27.991 468 303 10 20 484 102 538 2.52e-41 155
MS.gene020721.t1 MTR_1g022315 29.177 401 271 5 94 489 97 489 3.16e-41 154
MS.gene020721.t1 MTR_5g077580 25.766 555 297 13 26 491 25 553 1.80e-40 154
MS.gene020721.t1 MTR_3g074330 49.383 162 71 2 1 155 1 158 1.86e-40 144
MS.gene020721.t1 MTR_3g074360 49.383 162 71 2 1 155 1 158 1.86e-40 144
MS.gene020721.t1 MTR_8g077310 27.368 475 308 9 22 489 42 486 3.46e-40 151
MS.gene020721.t1 MTR_3g074310 49.383 162 71 2 1 155 1 158 5.39e-40 143
MS.gene020721.t1 MTR_2g049020 30.861 337 207 6 26 354 25 343 1.22e-39 151
MS.gene020721.t1 MTR_8g077310 28.750 400 267 7 97 489 1 389 1.55e-39 147
MS.gene020721.t1 MTR_2g013310 25.684 475 316 11 28 490 53 502 3.32e-39 149
MS.gene020721.t1 MTR_7g082270 26.230 488 320 10 6 484 42 498 1.41e-38 147
MS.gene020721.t1 MTR_2g048720 31.025 361 218 10 26 379 25 361 5.13e-38 147
MS.gene020721.t1 MTR_2g013310 25.854 410 287 8 92 490 26 429 9.37e-38 144
MS.gene020721.t1 MTR_8g077300 26.124 467 306 9 26 484 38 473 1.78e-36 141
MS.gene020721.t1 MTR_5g020270 27.387 398 275 6 97 489 1 389 7.07e-36 137
MS.gene020721.t1 MTR_5g020270 27.182 401 278 6 94 489 98 489 1.15e-35 139
MS.gene020721.t1 MTR_7g113960 26.809 470 296 11 24 484 24 454 1.71e-35 138
MS.gene020721.t1 MTR_0064s0040 44.444 153 73 2 17 169 14 154 1.24e-33 125
MS.gene020721.t1 MTR_7g082270 26.047 430 283 8 6 429 42 442 1.50e-33 132
MS.gene020721.t1 MTR_7g113970 27.317 410 263 9 88 484 104 491 5.18e-33 132
MS.gene020721.t1 MTR_2g026160 26.455 378 243 6 24 387 24 380 6.84e-33 132
MS.gene020721.t1 MTR_2g026160 33.333 105 69 1 387 490 454 558 8.64e-12 67.8
MS.gene020721.t1 MTR_2g020710 28.329 413 256 15 88 484 2 390 1.70e-32 128
MS.gene020721.t1 MTR_3g080240 23.904 456 318 9 32 484 98 527 2.07e-32 130
MS.gene020721.t1 MTR_2g020710 28.436 422 259 16 82 484 82 479 2.41e-32 129
MS.gene020721.t1 MTR_6g087910 26.786 392 271 7 97 484 103 482 3.72e-32 129
MS.gene020721.t1 MTR_4g118610 28.395 405 266 10 88 484 94 482 6.45e-32 128
MS.gene020721.t1 MTR_7g094450 25.871 402 279 6 88 484 82 469 1.28e-30 124
MS.gene020721.t1 MTR_5g020270 25.436 401 264 7 94 489 98 468 5.78e-30 122
MS.gene020721.t1 MTR_7g094110 28.000 350 235 6 139 484 135 471 1.18e-29 122
MS.gene020721.t1 MTR_5g019870 25.562 489 314 14 30 491 17 482 2.20e-29 121
MS.gene020721.t1 MTR_4g064820 28.158 380 240 8 6 367 75 439 2.49e-29 121
MS.gene020721.t1 MTR_4g013205 24.615 390 280 5 98 484 90 468 3.81e-29 120
MS.gene020721.t1 MTR_4g069500 27.124 306 201 6 207 492 3 306 3.35e-28 115
MS.gene020721.t1 MTR_8g077310 26.371 383 248 8 22 400 42 394 5.77e-27 113
MS.gene020721.t1 MTR_1g114280 35.443 158 81 3 349 504 21 159 6.43e-26 103
MS.gene020721.t1 MTR_2g026140 25.893 336 202 8 33 354 30 332 9.11e-25 108
MS.gene020721.t1 MTR_5g024740 28.720 289 169 8 27 309 4 261 6.84e-24 105
MS.gene020721.t1 MTR_7g094110 26.857 350 219 7 139 484 135 451 2.52e-23 103
MS.gene020721.t1 MTR_3g118530 32.353 170 114 1 94 262 54 223 8.05e-21 96.7
MS.gene020721.t1 MTR_3g118530 27.660 235 151 6 260 482 494 721 5.39e-11 65.5
MS.gene020721.t1 MTR_7g113960 25.714 350 215 8 24 363 24 338 9.82e-21 94.4
MS.gene020721.t1 MTR_8g073100 26.877 253 159 5 93 336 53 288 1.02e-20 96.3
MS.gene020721.t1 MTR_2g020710 27.762 353 212 16 82 415 82 410 1.40e-20 94.4
MS.gene020721.t1 MTR_3g118530 32.164 171 115 1 94 263 54 224 2.37e-20 94.7
MS.gene020721.t1 MTR_2g020710 27.841 352 211 16 82 414 82 409 2.59e-20 93.6
MS.gene020721.t1 MTR_3g116060 28.452 239 145 6 28 262 5 221 2.61e-20 95.1
MS.gene020721.t1 MTR_3g116060 27.311 238 154 7 260 485 484 714 3.03e-11 66.2
MS.gene020721.t1 MTR_5g044910 28.500 200 133 4 66 262 31 223 6.31e-20 93.6
MS.gene020721.t1 MTR_4g118610 27.761 335 220 10 88 415 94 413 7.80e-20 92.4
MS.gene020721.t1 MTR_2g020710 27.599 279 170 11 88 353 91 350 2.25e-18 87.4
MS.gene020721.t1 MTR_7g113970 26.374 273 182 6 88 354 104 363 4.97e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020721.t1 AT4G02050 78.131 503 110 0 1 503 1 503 0.0 833
MS.gene020721.t1 AT4G02050 78.131 503 110 0 1 503 1 503 0.0 833
MS.gene020721.t1 AT5G26340 59.528 509 197 5 1 504 1 505 0.0 633
MS.gene020721.t1 AT1G77210 58.551 497 203 3 1 495 1 496 0.0 622
MS.gene020721.t1 AT1G77210 58.551 497 203 3 1 495 1 496 0.0 622
MS.gene020721.t1 AT3G19940 53.968 504 227 3 1 501 1 502 0.0 580
MS.gene020721.t1 AT1G11260 57.114 499 205 5 1 494 1 495 0.0 571
MS.gene020721.t1 AT1G50310 54.257 505 225 4 1 501 1 503 0.0 567
MS.gene020721.t1 AT3G19930 54.455 505 221 4 1 501 1 500 0.0 560
MS.gene020721.t1 AT3G19930 54.455 505 221 4 1 501 1 500 0.0 560
MS.gene020721.t1 AT5G23270 56.112 499 211 4 1 494 1 496 0.0 557
MS.gene020721.t1 AT4G21480 55.285 492 215 3 7 494 3 493 0.0 547
MS.gene020721.t1 AT3G05960 52.016 496 236 2 11 504 5 500 0.0 541
MS.gene020721.t1 AT5G26250 51.724 493 237 1 13 504 8 500 0.0 537
MS.gene020721.t1 AT1G34580 50.598 502 237 5 1 495 1 498 9.78e-180 514
MS.gene020721.t1 AT5G61520 49.695 491 239 3 21 504 18 507 3.47e-174 500
MS.gene020721.t1 AT1G34580 51.002 449 212 4 54 495 1 448 7.15e-163 469
MS.gene020721.t1 AT1G07340 49.398 498 244 6 1 495 1 493 4.76e-161 466
MS.gene020721.t1 AT5G61520 49.455 459 224 3 53 504 2 459 1.64e-158 459
MS.gene020721.t1 AT1G77210 56.433 342 148 1 155 495 6 347 9.87e-148 427
MS.gene020721.t1 AT1G50310 53.429 350 160 2 155 501 11 360 1.10e-139 407
MS.gene020721.t1 AT2G18480 29.574 470 279 14 41 484 36 479 2.08e-48 174
MS.gene020721.t1 AT2G43330 28.049 492 315 10 14 493 20 484 2.51e-48 174
MS.gene020721.t1 AT3G18830 27.344 512 316 12 22 502 31 517 1.37e-47 173
MS.gene020721.t1 AT4G36670 27.236 492 313 11 23 491 13 482 1.50e-47 172
MS.gene020721.t1 AT2G16120 27.846 492 313 8 15 484 14 485 3.64e-46 169
MS.gene020721.t1 AT2G16130 26.829 492 318 8 15 484 14 485 5.09e-46 168
MS.gene020721.t1 AT5G17010 28.628 503 309 12 7 484 21 498 1.05e-44 164
MS.gene020721.t1 AT5G17010 28.628 503 309 12 7 484 21 498 1.05e-44 164
MS.gene020721.t1 AT5G17010 28.628 503 309 12 7 484 21 498 1.05e-44 164
MS.gene020721.t1 AT1G75220 29.630 432 274 7 78 489 66 487 1.16e-43 161
MS.gene020721.t1 AT5G59250 29.668 482 292 12 25 484 96 552 1.37e-43 162
MS.gene020721.t1 AT5G27350 28.778 483 293 12 12 484 19 460 6.28e-43 159
MS.gene020721.t1 AT5G27360 27.801 482 299 10 12 484 23 464 9.96e-43 158
MS.gene020721.t1 AT5G27360 27.801 482 299 10 12 484 71 512 4.72e-42 157
MS.gene020721.t1 AT5G16150 27.234 470 304 10 20 484 102 538 2.89e-40 153
MS.gene020721.t1 AT5G16150 27.234 470 304 10 20 484 102 538 2.89e-40 153
MS.gene020721.t1 AT5G16150 27.234 470 304 10 20 484 102 538 2.89e-40 153
MS.gene020721.t1 AT2G20780 26.220 492 319 12 12 489 40 501 3.14e-40 152
MS.gene020721.t1 AT3G05165 27.027 481 304 11 12 484 18 459 4.15e-40 151
MS.gene020721.t1 AT3G05165 27.027 481 304 11 12 484 18 459 4.15e-40 151
MS.gene020721.t1 AT3G05165 27.027 481 304 11 12 484 18 459 4.15e-40 151
MS.gene020721.t1 AT1G08890 25.963 493 319 10 1 484 1 456 5.39e-40 150
MS.gene020721.t1 AT1G08900 27.543 403 271 6 88 484 25 412 9.79e-40 149
MS.gene020721.t1 AT1G08930 26.186 485 310 11 10 484 41 487 1.55e-39 150
MS.gene020721.t1 AT1G08930 26.186 485 310 11 10 484 41 487 1.55e-39 150
MS.gene020721.t1 AT1G08900 27.543 403 271 6 88 484 59 446 2.33e-39 149
MS.gene020721.t1 AT1G08900 27.543 403 271 6 88 484 67 454 3.56e-39 148
MS.gene020721.t1 AT1G08900 27.543 403 271 6 88 484 67 454 3.56e-39 148
MS.gene020721.t1 AT1G19450 28.868 433 276 8 78 489 67 488 5.55e-39 148
MS.gene020721.t1 AT5G27360 30.726 358 231 7 131 484 16 360 9.91e-39 145
MS.gene020721.t1 AT5G27360 30.726 358 231 7 131 484 16 360 9.91e-39 145
MS.gene020721.t1 AT3G03090 26.378 508 320 13 4 484 18 498 2.57e-38 147
MS.gene020721.t1 AT3G05160 26.653 484 302 11 12 484 9 450 1.71e-37 144
MS.gene020721.t1 AT1G05030 26.580 459 300 11 33 484 85 513 2.01e-37 144
MS.gene020721.t1 AT3G05160 28.293 410 263 8 86 484 12 401 2.45e-37 142
MS.gene020721.t1 AT3G05160 28.293 410 263 8 86 484 12 401 2.45e-37 142
MS.gene020721.t1 AT2G20780 27.494 411 277 10 91 489 42 443 1.10e-35 139
MS.gene020721.t1 AT1G05030 26.573 429 290 10 63 484 51 461 1.39e-35 138
MS.gene020721.t1 AT2G35740 27.913 369 237 8 26 383 25 375 2.11e-35 139
MS.gene020721.t1 AT1G30220 30.205 341 204 8 26 354 27 345 2.01e-34 137
MS.gene020721.t1 AT3G05165 26.591 440 276 11 12 443 18 418 2.11e-34 135
MS.gene020721.t1 AT4G16480 29.444 360 221 8 24 370 24 363 3.18e-34 136
MS.gene020721.t1 AT4G16480 29.444 360 221 8 24 370 24 363 3.18e-34 136
MS.gene020721.t1 AT4G16480 29.444 360 221 8 24 370 24 363 3.18e-34 136
MS.gene020721.t1 AT3G05400 25.700 393 275 7 96 484 76 455 3.76e-34 134
MS.gene020721.t1 AT3G05165 26.807 429 267 11 12 432 18 407 5.62e-34 134
MS.gene020721.t1 AT3G05165 26.807 429 267 11 12 432 18 407 5.62e-34 134
MS.gene020721.t1 AT5G18840 28.505 428 265 12 82 491 77 481 1.19e-33 133
MS.gene020721.t1 AT1G08900 27.624 362 241 6 88 443 67 413 3.44e-33 131
MS.gene020721.t1 AT3G05155 25.245 408 276 9 86 484 67 454 3.81e-33 131
MS.gene020721.t1 AT3G05400 28.075 374 248 8 119 484 75 435 6.79e-33 130
MS.gene020721.t1 AT4G04750 28.079 406 267 8 88 484 78 467 8.73e-33 130
MS.gene020721.t1 AT4G04750 28.079 406 267 8 88 484 78 467 8.73e-33 130
MS.gene020721.t1 AT4G04750 28.079 406 267 8 88 484 122 511 9.69e-33 131
MS.gene020721.t1 AT2G48020 25.296 423 299 6 66 484 48 457 2.04e-32 129
MS.gene020721.t1 AT2G48020 25.296 423 299 6 66 484 48 457 2.04e-32 129
MS.gene020721.t1 AT4G04760 28.431 408 264 8 88 484 14 404 1.51e-31 126
MS.gene020721.t1 AT1G54730 26.638 458 300 12 33 486 38 463 3.17e-31 126
MS.gene020721.t1 AT4G04760 28.431 408 264 8 88 484 73 463 3.51e-31 126
MS.gene020721.t1 AT1G08920 25.182 413 268 7 88 484 74 461 1.66e-30 124
MS.gene020721.t1 AT5G27360 26.005 423 256 10 12 421 23 401 1.55e-29 120
MS.gene020721.t1 AT1G08920 24.762 420 268 7 88 484 74 468 2.10e-29 121
MS.gene020721.t1 AT1G79820 25.127 394 273 8 98 484 108 486 2.20e-29 121
MS.gene020721.t1 AT1G79820 25.127 394 273 8 98 484 108 486 2.20e-29 121
MS.gene020721.t1 AT4G04760 27.451 408 265 9 88 484 73 460 3.29e-28 117
MS.gene020721.t1 AT1G67300 24.685 397 274 9 98 484 105 486 2.61e-27 115
MS.gene020721.t1 AT1G67300 24.685 397 273 8 98 484 105 485 4.63e-27 114
MS.gene020721.t1 AT1G67300 24.685 397 273 8 98 484 105 485 4.63e-27 114
MS.gene020721.t1 AT1G54730 25.383 457 286 11 33 486 38 442 3.42e-26 111
MS.gene020721.t1 AT1G67300 24.709 344 234 7 98 432 105 432 4.94e-26 110
MS.gene020721.t1 AT1G67300 24.709 344 234 7 98 432 105 432 4.94e-26 110
MS.gene020721.t1 AT1G08920 24.731 372 239 7 88 443 74 420 4.94e-26 110
MS.gene020721.t1 AT1G79820 24.556 338 240 6 98 432 108 433 6.88e-26 110
MS.gene020721.t1 AT1G54730 25.783 415 272 12 33 443 38 420 7.40e-26 110
MS.gene020721.t1 AT1G67300 25.150 334 225 7 98 422 105 422 9.58e-26 109
MS.gene020721.t1 AT1G67300 25.150 334 225 7 98 422 105 422 9.58e-26 109
MS.gene020721.t1 AT5G17010 25.050 503 267 14 7 484 18 435 2.14e-24 105
MS.gene020721.t1 AT3G05150 25.180 417 274 11 86 487 75 468 2.68e-24 106
MS.gene020721.t1 AT3G05150 25.180 417 274 11 86 487 75 468 2.82e-24 105
MS.gene020721.t1 AT3G05150 25.180 417 274 11 86 487 75 468 2.82e-24 105
MS.gene020721.t1 AT3G51490 28.571 238 150 5 27 262 4 223 4.42e-23 103
MS.gene020721.t1 AT3G51490 28.571 238 150 5 27 262 4 223 5.39e-23 103
MS.gene020721.t1 AT3G51490 30.588 170 117 1 94 262 4 173 1.09e-21 99.4
MS.gene020721.t1 AT1G54730 24.396 414 258 11 33 443 38 399 7.24e-21 95.1
MS.gene020721.t1 AT1G79820 23.096 394 233 7 98 484 108 438 8.77e-21 95.5
MS.gene020721.t1 AT1G54730 25.323 387 253 12 33 415 38 392 1.27e-20 94.4
MS.gene020721.t1 AT1G54730 25.323 387 253 12 33 415 38 392 1.27e-20 94.4
MS.gene020721.t1 AT3G05155 25.000 276 183 7 86 354 67 325 2.55e-20 92.4
MS.gene020721.t1 AT3G20460 23.039 408 298 8 82 484 86 482 1.74e-19 91.7
MS.gene020721.t1 AT1G54730 25.231 325 211 9 33 354 38 333 4.98e-18 85.9
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.42e-17 86.7
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 484 713 9.41e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.42e-17 86.7
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 484 713 9.41e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.42e-17 86.7
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 484 713 9.41e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT4G35300 29.000 200 136 3 65 263 30 224 1.58e-17 86.3
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 494 723 9.23e-11 65.1
MS.gene020721.t1 AT1G54730 25.436 287 185 8 33 316 38 298 6.04e-17 82.4
MS.gene020721.t1 AT1G54730 25.436 287 185 8 33 316 38 298 6.04e-17 82.4
MS.gene020721.t1 AT2G48020 24.051 316 225 5 66 377 48 352 1.01e-16 82.4
MS.gene020721.t1 AT1G54730 25.436 287 185 8 33 316 38 298 1.46e-16 82.0
MS.gene020721.t1 AT1G20840 28.108 185 130 2 83 266 43 225 1.67e-16 83.2
MS.gene020721.t1 AT1G20840 28.108 185 130 2 83 266 43 225 1.67e-16 83.2
MS.gene020721.t1 AT1G79820 23.288 365 210 7 127 484 75 376 1.83e-16 81.6
MS.gene020721.t1 AT2G48020 24.415 299 203 5 64 354 46 329 6.36e-16 79.7
MS.gene020721.t1 AT4G35300 27.731 238 152 7 260 485 297 526 9.58e-11 64.7

Find 135 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATGTTGGAATTTC+AGG 0.114749 5.3:-76960837 MS.gene020721:intron
ATAGCCAATATGGTGAATTT+TGG 0.146641 5.3:-76958654 MS.gene020721:CDS
ATAGGAATACCTTTGGTTTC+AGG 0.203561 5.3:+76957605 None:intergenic
CTTCTATGCTCATTCAAGTT+TGG 0.222443 5.3:-76957689 MS.gene020721:CDS
CTCGGCATTGGCATTGGATT+TGG 0.233409 5.3:-76959147 MS.gene020721:CDS
CTGCAGGGAAGAATTCTTTA+AGG 0.234256 5.3:+76959412 None:intergenic
TGTTTCAAAGCATGGGCTTT+GGG 0.239156 5.3:-76958281 MS.gene020721:CDS
ACCTCTTCTTTATACATTGC+TGG 0.270344 5.3:-76959318 MS.gene020721:CDS
CTCCAAAGGCTATTCAATAT+TGG 0.271747 5.3:-76957882 MS.gene020721:CDS
TTCTATGCTCATTCAAGTTT+GGG 0.284634 5.3:-76957688 MS.gene020721:CDS
GTTATAGTTGCAATAATTCT+TGG 0.286580 5.3:-76957932 MS.gene020721:CDS
TTGTTTCAAAGCATGGGCTT+TGG 0.290520 5.3:-76958282 MS.gene020721:CDS
AACCTCTCAATGTTGATCTT+TGG 0.291362 5.3:-76959180 MS.gene020721:CDS
TGTTCCAAAATTCACCATAT+TGG 0.291524 5.3:+76958650 None:intergenic
ACTCTGGCCTATACCTTCTT+TGG 0.291969 5.3:+76958379 None:intergenic
GGTGGTATTAGCTTTCTAAT+TGG 0.297261 5.3:-76959228 MS.gene020721:CDS
ATAATTCTTGGAGTCAAGTT+TGG 0.307631 5.3:-76957920 MS.gene020721:CDS
TGCCTATTTGTTGTAGCATT+TGG 0.311203 5.3:-76957845 MS.gene020721:CDS
TAATTCTTGGAGTCAAGTTT+GGG 0.322575 5.3:-76957919 MS.gene020721:CDS
CCTCGTTCTATTAAGCTGTT+TGG 0.327634 5.3:+76958531 None:intergenic
AATAGCCTTTGGAGAGTTCC+TGG 0.329603 5.3:+76957891 None:intergenic
GAACGAGGATCACAAGAAAA+AGG 0.352296 5.3:-76958516 MS.gene020721:CDS
TGTGGAGGAAGCATTGGTTC+TGG 0.368859 5.3:-76957565 MS.gene020721:CDS
GAAAGGGCAGAGCTTTATAA+AGG 0.371840 5.3:-76960921 MS.gene020721:CDS
TTCAATATTGGTTGTAGTTG+TGG 0.376102 5.3:-76957870 MS.gene020721:CDS
CCTGCTGAACGAATTTCTAA+TGG 0.376766 5.3:+76957776 None:intergenic
ATCCAAATGCTACAACAAAT+AGG 0.379073 5.3:+76957843 None:intergenic
TCCGGTGTTGTTTCAAAGCA+TGG 0.390290 5.3:-76958289 MS.gene020721:CDS
ATAAATGTCATCTCTTCAAT+AGG 0.390541 5.3:+76957587 None:intergenic
GGATGGTCATGGGGTCCTCT+TGG 0.396597 5.3:-76957824 MS.gene020721:CDS
AACCAATATTGAATAGCCTT+TGG 0.397977 5.3:+76957880 None:intergenic
CTCTTCAATAGGAATACCTT+TGG 0.400912 5.3:+76957598 None:intergenic
TGATGCAGAGTTTGAAGATA+TGG 0.403313 5.3:-76958454 MS.gene020721:CDS
TGGCATTGGATTTGGAAATC+AGG 0.404411 5.3:-76959139 MS.gene020721:intron
AACACAAAGGATTAAACCTT+GGG 0.410026 5.3:-76958631 MS.gene020721:CDS
CCATTAGAAATTCGTTCAGC+AGG 0.416217 5.3:-76957776 MS.gene020721:CDS
TATTAAGCTGTTTGGAGTAT+CGG 0.419839 5.3:+76958539 None:intergenic
GGCCGTATTATGCTCGGCAT+TGG 0.425382 5.3:-76959159 MS.gene020721:CDS
CTATACTCCTCGGCTTTGAC+TGG 0.430131 5.3:-76958246 MS.gene020721:CDS
GGTCATGGGGTCCTCTTGGT+TGG 0.438718 5.3:-76957820 MS.gene020721:CDS
CCAACTTCACAAATCTTAAC+CGG 0.440160 5.3:-76958336 MS.gene020721:CDS
ACATACTCCAAAGAAGGTAT+AGG 0.440812 5.3:-76958386 MS.gene020721:CDS
CATTGCAACAGTTGATAAGC+TGG 0.442286 5.3:-76958193 MS.gene020721:CDS
ATTAAGCTGTTTGGAGTATC+GGG 0.443684 5.3:+76958540 None:intergenic
ATCTTTGGCCGTATTATGCT+CGG 0.444676 5.3:-76959165 MS.gene020721:CDS
GCATGCATTGTTGCTGCTAC+AGG 0.448543 5.3:-76960873 MS.gene020721:CDS
TTGTAGCATTTGGATGGTCA+TGG 0.450333 5.3:-76957835 MS.gene020721:CDS
CATTTATGTGGAGGAAGCAT+TGG 0.450376 5.3:-76957571 MS.gene020721:CDS
ATTATGCTCGGCATTGGCAT+TGG 0.452407 5.3:-76959153 MS.gene020721:CDS
TTTGGAGTATGTTACGAAAC+GGG 0.453525 5.3:+76958397 None:intergenic
CCGGTGTTGTTTCAAAGCAT+GGG 0.455864 5.3:-76958288 MS.gene020721:CDS
AAGCTCCTAGAGAAAATTAG+AGG 0.455916 5.3:-76958489 MS.gene020721:CDS
TATGGTTGAAGCAAGCGAAT+TGG 0.459129 5.3:-76958436 MS.gene020721:CDS
TCTACCATTACAAGGACATA+TGG 0.468383 5.3:-76959273 MS.gene020721:CDS
TGCCAATGCCGAGCATAATA+CGG 0.469492 5.3:+76959157 None:intergenic
CCGGTATTGCAGCCAAGCCT+AGG 0.471523 5.3:+76958595 None:intergenic
CCTAGGCTTGGCTGCAATAC+CGG 0.472600 5.3:-76958595 MS.gene020721:CDS
AGGTAAATGCCGCAAGGCCC+TGG 0.473138 5.3:+76959337 None:intergenic
CCGGTTAAGATTTGTGAAGT+TGG 0.477239 5.3:+76958336 None:intergenic
TTTCACTTTCATAATCGCTC+AGG 0.477538 5.3:-76957723 MS.gene020721:CDS
CTTTGGAGTATGTTACGAAA+CGG 0.482175 5.3:+76958396 None:intergenic
TCCGCTTTATTTGTCAGAGA+TGG 0.483803 5.3:-76958742 MS.gene020721:CDS
ACAATTGCCATCACCAACTC+TGG 0.484629 5.3:+76958363 None:intergenic
GTTTCAAAGCATGGGCTTTG+GGG 0.484868 5.3:-76958280 MS.gene020721:CDS
TGTAGCATTTGGATGGTCAT+GGG 0.485689 5.3:-76957834 MS.gene020721:CDS
TACAAGGACATATGGACGTC+GGG 0.502753 5.3:-76959265 MS.gene020721:CDS
GAACACAAAGGATTAAACCT+TGG 0.504403 5.3:-76958632 MS.gene020721:CDS
TTGAAGAGATGACATTTATG+TGG 0.507920 5.3:-76957583 MS.gene020721:CDS
TGTTTGCATCTACCATTACA+AGG 0.512056 5.3:-76959281 MS.gene020721:CDS
TGCCATTCTCTTCTACGCTC+CGG 0.512993 5.3:-76958307 MS.gene020721:CDS
CAGCTTATCAACTGTTGCAA+TGG 0.516946 5.3:+76958194 None:intergenic
TGTTCAATCCTCCTCGCAGG+TGG 0.517855 5.3:+76958712 None:intergenic
ATGGAGATTATCCCTAGGCT+TGG 0.521704 5.3:-76958607 MS.gene020721:CDS
CAGGTAATGTGGACAACGAA+AGG 0.522698 5.3:-76960938 MS.gene020721:CDS
AATCCTCCTCGCAGGTGGGT+CGG 0.524075 5.3:+76958717 None:intergenic
TCTAATGGAAATATCTCACT+TGG 0.527139 5.3:+76957791 None:intergenic
TATTTGTTGTAGCATTTGGA+TGG 0.530147 5.3:-76957841 MS.gene020721:CDS
TTCTTTAAGGAAGTCATCCA+TGG 0.537977 5.3:+76959425 None:intergenic
GAAGAGAATGGCATTTATGC+CGG 0.539983 5.3:+76958317 None:intergenic
AATACAAATGATCACATGTC+AGG 0.541695 5.3:-76958142 MS.gene020721:intron
AGTCAAGTTTGGGGATAACC+AGG 0.542457 5.3:-76957909 MS.gene020721:CDS
TTCGTAACATACTCCAAAGA+AGG 0.546688 5.3:-76958392 MS.gene020721:CDS
ACGTCCATATGTCCTTGTAA+TGG 0.550116 5.3:+76959269 None:intergenic
AGGAGAATCAAGAATATGGC+TGG 0.553594 5.3:-76960975 None:intergenic
TACTCCTCGGCTTTGACTGG+TGG 0.554215 5.3:-76958243 MS.gene020721:CDS
CTGTTCTTGCCTGAAACCAA+AGG 0.555129 5.3:-76957614 MS.gene020721:CDS
AGAATTCTTCTTATCAGTGG+TGG 0.556292 5.3:-76958165 MS.gene020721:CDS
AAAGGGCAGAGCTTTATAAA+GGG 0.558906 5.3:-76960920 MS.gene020721:CDS
TTACTGCAAGTACGACAACC+AGG 0.562937 5.3:-76959355 MS.gene020721:CDS
CCTATCGTCATTAAAAGAGC+CGG 0.569789 5.3:+76958576 None:intergenic
AGGTAATGTGGACAACGAAA+GGG 0.572836 5.3:-76960937 MS.gene020721:CDS
AACAGGCGGGGTGACTTCCA+TGG 0.574590 5.3:-76959442 MS.gene020721:intron
CATTAGAAATTCGTTCAGCA+GGG 0.576921 5.3:-76957775 MS.gene020721:CDS
ATTGCAACAGTTGATAAGCT+GGG 0.577739 5.3:-76958192 MS.gene020721:CDS
ACCAGCAATGTATAAAGAAG+AGG 0.579296 5.3:+76959317 None:intergenic
ATTGAACATGATGTTTCAAG+TGG 0.581559 5.3:-76958697 MS.gene020721:CDS
AAGAGATGACATTTATGTGG+AGG 0.583705 5.3:-76957580 MS.gene020721:CDS
CACCGGAGCGTAGAAGAGAA+TGG 0.585916 5.3:+76958305 None:intergenic
TTTCAAAGCATGGGCTTTGG+GGG 0.587267 5.3:-76958279 MS.gene020721:CDS
TCATGTTCAATCCTCCTCGC+AGG 0.587735 5.3:+76958709 None:intergenic
CAACAGTTGATAAGCTGGGA+AGG 0.589487 5.3:-76958188 MS.gene020721:CDS
TGGGGATGGAGATTATCCCT+AGG 0.590460 5.3:-76958612 MS.gene020721:CDS
AGGAGAATTCTTCTTATCAG+TGG 0.597322 5.3:-76958168 MS.gene020721:CDS
CGGTATTGCAGCCAAGCCTA+GGG 0.597757 5.3:+76958596 None:intergenic
AGACGCTTCACTATACTCCT+CGG 0.600675 5.3:-76958256 MS.gene020721:CDS
GAATCAAGAATATGGCTGGT+GGG 0.605823 5.3:-76960971 None:intergenic
GGCAGAGCTTTATAAAGGGA+GGG 0.608920 5.3:-76960916 MS.gene020721:CDS
AGAATCAAGAATATGGCTGG+TGG 0.611570 5.3:-76960972 None:intergenic
TGTAATGGTAGATGCAAACA+AGG 0.616084 5.3:+76959284 None:intergenic
GGGCAGAGCTTTATAAAGGG+AGG 0.616910 5.3:-76960917 MS.gene020721:CDS
AAAGGATTAAACCTTGGGGA+TGG 0.617923 5.3:-76958626 MS.gene020721:CDS
GTTCAATCCTCCTCGCAGGT+GGG 0.620696 5.3:+76958713 None:intergenic
AAGAAGGTATAGGCCAGAGT+TGG 0.622934 5.3:-76958376 MS.gene020721:CDS
GGCCAAAGATCAACATTGAG+AGG 0.626669 5.3:+76959178 None:intergenic
TGCATTGTTGCTGCTACAGG+AGG 0.628396 5.3:-76960870 MS.gene020721:CDS
GTAGCATTTGGATGGTCATG+GGG 0.629140 5.3:-76957833 MS.gene020721:CDS
GCCATCTCTGACAAATAAAG+CGG 0.641615 5.3:+76958741 None:intergenic
GTATAGGCCAGAGTTGGTGA+TGG 0.643752 5.3:-76958370 MS.gene020721:CDS
GTACGACAACCAGGGCCTTG+CGG 0.646710 5.3:-76959346 MS.gene020721:CDS
CTTGGAACTGTCCAACCAAG+AGG 0.647782 5.3:+76957809 None:intergenic
CGGGCAAGTATCATCAGTGG+TGG 0.647876 5.3:-76959246 MS.gene020721:CDS
CCAAACAGCTTAATAGAACG+AGG 0.650358 5.3:-76958531 MS.gene020721:CDS
AATTCTTGGAGTCAAGTTTG+GGG 0.652664 5.3:-76957918 MS.gene020721:CDS
GCACCGACCCACCTGCGAGG+AGG 0.654672 5.3:-76958720 MS.gene020721:CDS
CCCATGCTTTGAAACAACAC+CGG 0.655757 5.3:+76958288 None:intergenic
AGGGATAATCTCCATCCCCA+AGG 0.661215 5.3:+76958615 None:intergenic
GATAACCAGGAACTCTCCAA+AGG 0.663329 5.3:-76957896 MS.gene020721:CDS
TTACAAGGACATATGGACGT+CGG 0.663941 5.3:-76959266 MS.gene020721:CDS
AAGAAGAGGTAAATGCCGCA+AGG 0.664887 5.3:+76959331 None:intergenic
ATGGCACCGACCCACCTGCG+AGG 0.673551 5.3:-76958723 MS.gene020721:CDS
CGTCGGGCAAGTATCATCAG+TGG 0.675182 5.3:-76959249 MS.gene020721:CDS
CAACATTGAGAGGTTAATAG+CGG 0.676224 5.3:+76959188 None:intergenic
AACGCCACCAGTCAAAGCCG+AGG 0.679011 5.3:+76958239 None:intergenic
TACTGCAAGTACGACAACCA+GGG 0.691497 5.3:-76959354 MS.gene020721:CDS
ACACAAAGGATTAAACCTTG+GGG 0.733320 5.3:-76958630 MS.gene020721:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTGTTCATAAAAAATA+TGG - chr5.3:76959645-76959664 MS.gene020721:intron 10.0%
!! TACAACTAATTAAATAATTT+GGG + chr5.3:76958797-76958816 None:intergenic 10.0%
!! TATTTGTTCATAAAAAATAT+GGG - chr5.3:76959646-76959665 MS.gene020721:intron 10.0%
!!! ATGAAAATTTAAAACTATTA+TGG - chr5.3:76957924-76957943 MS.gene020721:CDS 10.0%
!! ACAACTAATTAAATAATTTG+GGG + chr5.3:76958796-76958815 None:intergenic 15.0%
!! GTACAACTAATTAAATAATT+TGG + chr5.3:76958798-76958817 None:intergenic 15.0%
!! TTTGGTTATAACTAAATAAA+GGG + chr5.3:76960443-76960462 None:intergenic 15.0%
!!! ACATCATATTTCAATTTTTT+TGG - chr5.3:76958002-76958021 MS.gene020721:intron 15.0%
!!! TAAAACATTTTTTCCTTTAT+TGG - chr5.3:76959487-76959506 MS.gene020721:intron 15.0%
!!! TAAATTTTTTCTATGAAAGA+AGG - chr5.3:76959523-76959542 MS.gene020721:intron 15.0%
!!! TTTTGGTTATAACTAAATAA+AGG + chr5.3:76960444-76960463 None:intergenic 15.0%
!! AAAATATTTGTCAACTTTCA+AGG + chr5.3:76959695-76959714 None:intergenic 20.0%
!! AATAAAACATTCTATCATGA+TGG + chr5.3:76958168-76958187 None:intergenic 20.0%
!! AATTCTAACAGATAATGAAA+TGG + chr5.3:76958982-76959001 None:intergenic 20.0%
!! AATTTATAGAATCAGGAAAT+AGG + chr5.3:76957879-76957898 None:intergenic 20.0%
!! GAAACTGAACAAAAAATTTA+GGG - chr5.3:76960504-76960523 MS.gene020721:intron 20.0%
!! GAATGATAATTTATAGAATC+AGG + chr5.3:76957886-76957905 None:intergenic 20.0%
!! GACTAAAAGTTATTGAAATA+AGG + chr5.3:76958922-76958941 None:intergenic 20.0%
!! TGAAACTGAACAAAAAATTT+AGG - chr5.3:76960503-76960522 MS.gene020721:intron 20.0%
!!! TCTAGAGATATGTTTTAAAT+TGG + chr5.3:76959560-76959579 None:intergenic 20.0%
! AACCACTTCATTATCTATAA+AGG - chr5.3:76958465-76958484 MS.gene020721:CDS 25.0%
! ACAAGTATCAAATAGTTTGA+AGG - chr5.3:76959588-76959607 MS.gene020721:intron 25.0%
! ATAAATGTCATCTCTTCAAT+AGG + chr5.3:76960908-76960927 None:intergenic 25.0%
! ATACTAACAATCCATATGTT+GGG - chr5.3:76958541-76958560 MS.gene020721:CDS 25.0%
! ATGAATGTTATATGGTTAAC+AGG - chr5.3:76959033-76959052 MS.gene020721:intron 25.0%
! CAAGAACAGAAAAACAAATA+TGG + chr5.3:76960867-76960886 None:intergenic 25.0%
! CAAGTATCAAATAGTTTGAA+GGG - chr5.3:76959589-76959608 MS.gene020721:intron 25.0%
! CGATTATGAAAGTGAAAAAA+AGG + chr5.3:76960766-76960785 None:intergenic 25.0%
! GAAAAACAAATATGGTCATT+AGG + chr5.3:76960859-76960878 None:intergenic 25.0%
! GTGGTTTATAGATAATTTGA+AGG + chr5.3:76958451-76958470 None:intergenic 25.0%
! GTTATAACTAAATAAAGGGT+AGG + chr5.3:76960439-76960458 None:intergenic 25.0%
! GTTATAGTTGCAATAATTCT+TGG - chr5.3:76960560-76960579 MS.gene020721:intron 25.0%
! TTCATTATCTATAAAGGCTT+GGG - chr5.3:76958471-76958490 MS.gene020721:CDS 25.0%
! TTCTATCTATGATGAATTGA+TGG - chr5.3:76959449-76959468 MS.gene020721:intron 25.0%
! TTCTTCTGATGAATGTTATA+TGG - chr5.3:76959025-76959044 MS.gene020721:intron 25.0%
!! ACAATAGCTTAACACTTTTA+AGG + chr5.3:76959414-76959433 None:intergenic 25.0%
!! ACATGATTAGAATTTGTTTG+AGG + chr5.3:76960390-76960409 None:intergenic 25.0%
!! TATGGATTGTTAGTATCTAA+AGG + chr5.3:76958537-76958556 None:intergenic 25.0%
!! TCGTGTATGAACATAATTTT+TGG + chr5.3:76960461-76960480 None:intergenic 25.0%
!!! GCTAGGTTTTTTAGATTTTT+AGG + chr5.3:76957958-76957977 None:intergenic 25.0%
!!! GGATATTTATTGGTCATTTT+GGG - chr5.3:76958380-76958399 MS.gene020721:CDS 25.0%
!!! GTTAGAATTTTTTGTGTTCA+TGG - chr5.3:76958993-76959012 MS.gene020721:intron 25.0%
AAACAATGGCAAATTTCTTG+AGG + chr5.3:76958110-76958129 None:intergenic 30.0%
AAACGTTGTGAATTAAGCTT+TGG + chr5.3:76958221-76958240 None:intergenic 30.0%
AACAATGGCAAATTTCTTGA+GGG + chr5.3:76958109-76958128 None:intergenic 30.0%
AACACAAAGGATTAAACCTT+GGG - chr5.3:76959861-76959880 MS.gene020721:intron 30.0%
AACCAATATTGAATAGCCTT+TGG + chr5.3:76960615-76960634 None:intergenic 30.0%
AACGTTGTGAATTAAGCTTT+GGG + chr5.3:76958220-76958239 None:intergenic 30.0%
AATACAAATGATCACATGTC+AGG - chr5.3:76960350-76960369 MS.gene020721:intron 30.0%
AATGTTATATGGTTAACAGG+CGG - chr5.3:76959036-76959055 MS.gene020721:intron 30.0%
ACATAAATGTGTACTCTATC+AGG - chr5.3:76958733-76958752 MS.gene020721:CDS 30.0%
ACTCATATCGTCATAAACTA+AGG - chr5.3:76958836-76958855 MS.gene020721:intron 30.0%
AGCCTTTATAGATAATGAAG+TGG + chr5.3:76958470-76958489 None:intergenic 30.0%
AGTTACAACCAGAAAATAGT+CGG + chr5.3:76958034-76958053 None:intergenic 30.0%
ATAATTCTTGGAGTCAAGTT+TGG - chr5.3:76960572-76960591 MS.gene020721:intron 30.0%
ATCCAAATGCTACAACAAAT+AGG + chr5.3:76960652-76960671 None:intergenic 30.0%
ATCGTCATAAACTAAGGAAA+GGG - chr5.3:76958842-76958861 MS.gene020721:intron 30.0%
ATGCAATTTCATATCTCTTG+TGG + chr5.3:76957798-76957817 None:intergenic 30.0%
ATTGAACATGATGTTTCAAG+TGG - chr5.3:76959795-76959814 MS.gene020721:intron 30.0%
CAGATAATGAAATGGATGTA+AGG + chr5.3:76958974-76958993 None:intergenic 30.0%
CTAAGATAACCAAATCAGTA+AGG + chr5.3:76958878-76958897 None:intergenic 30.0%
CTTCATTATCTATAAAGGCT+TGG - chr5.3:76958470-76958489 MS.gene020721:CDS 30.0%
GATACTAACAATCCATATGT+TGG - chr5.3:76958540-76958559 MS.gene020721:CDS 30.0%
TAATTCTTGGAGTCAAGTTT+GGG - chr5.3:76960573-76960592 MS.gene020721:intron 30.0%
TATCGTCATAAACTAAGGAA+AGG - chr5.3:76958841-76958860 MS.gene020721:intron 30.0%
TCGACCATTTCATTTATACA+CGG + chr5.3:76958077-76958096 None:intergenic 30.0%
TCTAAAAAACCTAGCTGTAA+TGG - chr5.3:76957963-76957982 MS.gene020721:intron 30.0%
TCTAATGGAAATATCTCACT+TGG + chr5.3:76960704-76960723 None:intergenic 30.0%
TGCAATTTCATATCTCTTGT+GGG + chr5.3:76957797-76957816 None:intergenic 30.0%
TGTTCCAAAATTCACCATAT+TGG + chr5.3:76959845-76959864 None:intergenic 30.0%
TTGAAGAGATGACATTTATG+TGG - chr5.3:76960909-76960928 MS.gene020721:CDS 30.0%
! AAATGACGTTAACACTTTTG+AGG - chr5.3:76958356-76958375 MS.gene020721:CDS 30.0%
! AATGACGTTAACACTTTTGA+GGG - chr5.3:76958357-76958376 MS.gene020721:CDS 30.0%
! ACTATGTTTCCTTACTGATT+TGG - chr5.3:76958866-76958885 MS.gene020721:intron 30.0%
! ATAGCCAATATGGTGAATTT+TGG - chr5.3:76959838-76959857 MS.gene020721:intron 30.0%
! CTTGTGTTCTAAACCAATAA+AGG + chr5.3:76959503-76959522 None:intergenic 30.0%
! GGGATATTTATTGGTCATTT+TGG - chr5.3:76958379-76958398 MS.gene020721:CDS 30.0%
! TAGTTCCTCTAATTTTCTCT+AGG + chr5.3:76960011-76960030 None:intergenic 30.0%
! TATTAAGCTGTTTGGAGTAT+CGG + chr5.3:76959956-76959975 None:intergenic 30.0%
! TGATTAGAATTTGTTTGAGG+CGG + chr5.3:76960387-76960406 None:intergenic 30.0%
! TTCAATATTGGTTGTAGTTG+TGG - chr5.3:76960622-76960641 MS.gene020721:intron 30.0%
! TTCTATGCTCATTCAAGTTT+GGG - chr5.3:76960804-76960823 MS.gene020721:intron 30.0%
!! TATTTGTTGTAGCATTTGGA+TGG - chr5.3:76960651-76960670 MS.gene020721:intron 30.0%
!!! TCACTTTTTGGTTATGATGT+TGG - chr5.3:76957646-76957665 MS.gene020721:CDS 30.0%
AACCTCTCAATGTTGATCTT+TGG - chr5.3:76959312-76959331 MS.gene020721:CDS 35.0%
AAGACTTAAGGGTCAAGAAT+TGG - chr5.3:76958254-76958273 MS.gene020721:CDS 35.0%
AAGAGATGACATTTATGTGG+AGG - chr5.3:76960912-76960931 MS.gene020721:CDS 35.0%
AAGCTCCTAGAGAAAATTAG+AGG - chr5.3:76960003-76960022 MS.gene020721:intron 35.0%
AATCTCAACCGAAGACTTAA+GGG - chr5.3:76958243-76958262 MS.gene020721:CDS 35.0%
AATTCTTGGAGTCAAGTTTG+GGG - chr5.3:76960574-76960593 MS.gene020721:intron 35.0%
ACACAAAGGATTAAACCTTG+GGG - chr5.3:76959862-76959881 MS.gene020721:intron 35.0%
ACCAGCAATGTATAAAGAAG+AGG + chr5.3:76959178-76959197 None:intergenic 35.0%
ACCTCTTCTTTATACATTGC+TGG - chr5.3:76959174-76959193 MS.gene020721:CDS 35.0%
AGAATTCTTCTTATCAGTGG+TGG - chr5.3:76960327-76960346 MS.gene020721:intron 35.0%
AGACTTAAGGGTCAAGAATT+GGG - chr5.3:76958255-76958274 MS.gene020721:CDS 35.0%
AGGAGAATTCTTCTTATCAG+TGG - chr5.3:76960324-76960343 MS.gene020721:intron 35.0%
ATGTCGCCAATAATTGACAA+TGG + chr5.3:76958296-76958315 None:intergenic 35.0%
ATGTTATATGGTTAACAGGC+GGG - chr5.3:76959037-76959056 MS.gene020721:intron 35.0%
ATTCTTGACCCTTAAGTCTT+CGG + chr5.3:76958254-76958273 None:intergenic 35.0%
ATTGTCAATTATTGGCGACA+TGG - chr5.3:76958295-76958314 MS.gene020721:CDS 35.0%
CAACATTGAGAGGTTAATAG+CGG + chr5.3:76959307-76959326 None:intergenic 35.0%
CATTAGAAATTCGTTCAGCA+GGG - chr5.3:76960717-76960736 MS.gene020721:intron 35.0%
CCAACTTCACAAATCTTAAC+CGG - chr5.3:76960156-76960175 MS.gene020721:intron 35.0%
CTCCAAAGGCTATTCAATAT+TGG - chr5.3:76960610-76960629 MS.gene020721:intron 35.0%
CTCTTCAATAGGAATACCTT+TGG + chr5.3:76960897-76960916 None:intergenic 35.0%
GAACACAAAGGATTAAACCT+TGG - chr5.3:76959860-76959879 MS.gene020721:intron 35.0%
GCAAGCTGATAGTAAAACAA+TGG + chr5.3:76958124-76958143 None:intergenic 35.0%
GGTAGGATAATAAGTGTTTG+TGG + chr5.3:76960422-76960441 None:intergenic 35.0%
GGTTATGATGTTGGAATTTC+AGG - chr5.3:76957655-76957674 MS.gene020721:CDS 35.0%
TAAATGTGTACTCTATCAGG+AGG - chr5.3:76958736-76958755 MS.gene020721:CDS 35.0%
TAATCTCAACCGAAGACTTA+AGG - chr5.3:76958242-76958261 MS.gene020721:CDS 35.0%
TCTACCATTACAAGGACATA+TGG - chr5.3:76959219-76959238 MS.gene020721:CDS 35.0%
TGATGCAGAGTTTGAAGATA+TGG - chr5.3:76960038-76960057 MS.gene020721:intron 35.0%
TGTAATGGTAGATGCAAACA+AGG + chr5.3:76959211-76959230 None:intergenic 35.0%
TGTTTGCATCTACCATTACA+AGG - chr5.3:76959211-76959230 MS.gene020721:CDS 35.0%
TTCGTAACATACTCCAAAGA+AGG - chr5.3:76960100-76960119 MS.gene020721:intron 35.0%
TTGTCAATTATTGGCGACAT+GGG - chr5.3:76958296-76958315 MS.gene020721:CDS 35.0%
TTTCACTTTCATAATCGCTC+AGG - chr5.3:76960769-76960788 MS.gene020721:intron 35.0%
! AAAGGGCAGAGCTTTATAAA+GGG - chr5.3:76957572-76957591 MS.gene020721:CDS 35.0%
! ACATACTCCAAAGAAGGTAT+AGG - chr5.3:76960106-76960125 MS.gene020721:intron 35.0%
! ATAGGAATACCTTTGGTTTC+AGG + chr5.3:76960890-76960909 None:intergenic 35.0%
! ATGACGTTAACACTTTTGAG+GGG - chr5.3:76958358-76958377 MS.gene020721:CDS 35.0%
! ATTAAGCTGTTTGGAGTATC+GGG + chr5.3:76959955-76959974 None:intergenic 35.0%
! CTTCTATGCTCATTCAAGTT+TGG - chr5.3:76960803-76960822 MS.gene020721:intron 35.0%
! GTCTTTTACAACAGGTAATG+TGG - chr5.3:76957543-76957562 MS.gene020721:CDS 35.0%
! TGCCTTCAAAAAAAGCATGA+GGG + chr5.3:76959728-76959747 None:intergenic 35.0%
! TGCGATTTTCATAGCCAATA+TGG - chr5.3:76959828-76959847 MS.gene020721:intron 35.0%
! TGTTGTTTACCATTACAGCT+AGG + chr5.3:76957975-76957994 None:intergenic 35.0%
! TTCTTTAAGGAAGTCATCCA+TGG + chr5.3:76959070-76959089 None:intergenic 35.0%
! TTGCCTTCAAAAAAAGCATG+AGG + chr5.3:76959729-76959748 None:intergenic 35.0%
! TTTGGAGTATGTTACGAAAC+GGG + chr5.3:76960098-76960117 None:intergenic 35.0%
!! ATTGCAACAGTTGATAAGCT+GGG - chr5.3:76960300-76960319 MS.gene020721:intron 35.0%
!! CTTTGGAGTATGTTACGAAA+CGG + chr5.3:76960099-76960118 None:intergenic 35.0%
!! CTTTTGAGGGGGATATTTAT+TGG - chr5.3:76958370-76958389 MS.gene020721:CDS 35.0%
!! GGTGGTATTAGCTTTCTAAT+TGG - chr5.3:76959264-76959283 MS.gene020721:CDS 35.0%
!! TACTATCAGCTTGCTATAGA+TGG - chr5.3:76958130-76958149 MS.gene020721:intron 35.0%
!! TGCCTATTTGTTGTAGCATT+TGG - chr5.3:76960647-76960666 MS.gene020721:intron 35.0%
!!! TCTTTCTCTTTTTTGCTGGT+TGG - chr5.3:76960828-76960847 MS.gene020721:intron 35.0%
!!! TGGTGAATTTTGGAACACAA+AGG - chr5.3:76959848-76959867 MS.gene020721:intron 35.0%
AAAGGATTAAACCTTGGGGA+TGG - chr5.3:76959866-76959885 MS.gene020721:intron 40.0%
AACCTAATGACCGATCAATC+TGG + chr5.3:76958634-76958653 None:intergenic 40.0%
ACGTCCATATGTCCTTGTAA+TGG + chr5.3:76959226-76959245 None:intergenic 40.0%
AGATTGATCGGTCATTAGGT+TGG - chr5.3:76958633-76958652 MS.gene020721:CDS 40.0%
AGGTAATGTGGACAACGAAA+GGG - chr5.3:76957555-76957574 MS.gene020721:CDS 40.0%
ATCAAACATCCACCAACTGA+TGG + chr5.3:76958604-76958623 None:intergenic 40.0%
ATCTATAAAGGCTTGGGACT+TGG - chr5.3:76958477-76958496 MS.gene020721:CDS 40.0%
ATCTTTGGCCGTATTATGCT+CGG - chr5.3:76959327-76959346 MS.gene020721:CDS 40.0%
CAGCTTATCAACTGTTGCAA+TGG + chr5.3:76960301-76960320 None:intergenic 40.0%
CCAAACAGCTTAATAGAACG+AGG - chr5.3:76959961-76959980 MS.gene020721:intron 40.0%
CCATTAGAAATTCGTTCAGC+AGG - chr5.3:76960716-76960735 MS.gene020721:intron 40.0%
CCGGTTAAGATTTGTGAAGT+TGG + chr5.3:76960159-76960178 None:intergenic 40.0%
CCTATCGTCATTAAAAGAGC+CGG + chr5.3:76959919-76959938 None:intergenic 40.0%
CCTCGTTCTATTAAGCTGTT+TGG + chr5.3:76959964-76959983 None:intergenic 40.0%
CCTGCTGAACGAATTTCTAA+TGG + chr5.3:76960719-76960738 None:intergenic 40.0%
CGAGCCGTGTATAAATGAAA+TGG - chr5.3:76958070-76958089 MS.gene020721:intron 40.0%
CTGCAGGGAAGAATTCTTTA+AGG + chr5.3:76959083-76959102 None:intergenic 40.0%
GAACGAGGATCACAAGAAAA+AGG - chr5.3:76959976-76959995 MS.gene020721:intron 40.0%
GAAGAGAATGGCATTTATGC+CGG + chr5.3:76960178-76960197 None:intergenic 40.0%
GAGGATCACAAGAAAAAGGA+AGG - chr5.3:76959980-76959999 MS.gene020721:intron 40.0%
GATTAGACCTCCAGATTGAT+CGG - chr5.3:76958621-76958640 MS.gene020721:CDS 40.0%
GCCAATAATTGACAATGGAG+TGG + chr5.3:76958291-76958310 None:intergenic 40.0%
GCCACTCCATTGTCAATTAT+TGG - chr5.3:76958287-76958306 MS.gene020721:CDS 40.0%
GCCATCTCTGACAAATAAAG+CGG + chr5.3:76959754-76959773 None:intergenic 40.0%
GTATGAACTGACCCAACATA+TGG + chr5.3:76958555-76958574 None:intergenic 40.0%
GTTCATACAAGACTTTGCTC+TGG - chr5.3:76958567-76958586 MS.gene020721:CDS 40.0%
TATGGTTGAAGCAAGCGAAT+TGG - chr5.3:76960056-76960075 MS.gene020721:intron 40.0%
TCTATAAAGGCTTGGGACTT+GGG - chr5.3:76958478-76958497 MS.gene020721:CDS 40.0%
TGTAGCATTTGGATGGTCAT+GGG - chr5.3:76960658-76960677 MS.gene020721:intron 40.0%
TGTTATATGGTTAACAGGCG+GGG - chr5.3:76959038-76959057 MS.gene020721:intron 40.0%
TGTTTCAAAGCATGGGCTTT+GGG - chr5.3:76960211-76960230 MS.gene020721:intron 40.0%
TTACAAGGACATATGGACGT+CGG - chr5.3:76959226-76959245 MS.gene020721:CDS 40.0%
TTGTAGCATTTGGATGGTCA+TGG - chr5.3:76960657-76960676 MS.gene020721:intron 40.0%
TTGTTTCAAAGCATGGGCTT+TGG - chr5.3:76960210-76960229 MS.gene020721:intron 40.0%
! ACTTTAAGGGTCATCCATCA+CGG - chr5.3:76958411-76958430 MS.gene020721:CDS 40.0%
! CATTTATGTGGAGGAAGCAT+TGG - chr5.3:76960921-76960940 MS.gene020721:CDS 40.0%
! CCTTCAAAAAAAGCATGAGG+GGG + chr5.3:76959726-76959745 None:intergenic 40.0%
! GAAAGGGCAGAGCTTTATAA+AGG - chr5.3:76957571-76957590 MS.gene020721:CDS 40.0%
! GCCTTCAAAAAAAGCATGAG+GGG + chr5.3:76959727-76959746 None:intergenic 40.0%
! GCTCTTTTAATGACGATAGG+AGG - chr5.3:76959919-76959938 MS.gene020721:intron 40.0%
! GGTGTAAACCGACTATTTTC+TGG - chr5.3:76958023-76958042 MS.gene020721:intron 40.0%
! GTTTTTGCACGTATACTGCA+GGG + chr5.3:76959098-76959117 None:intergenic 40.0%
! TGATGGATGACCCTTAAAGT+CGG + chr5.3:76958411-76958430 None:intergenic 40.0%
! TGGCATTGGATTTGGAAATC+AGG - chr5.3:76959353-76959372 MS.gene020721:CDS 40.0%
!! CATTGCAACAGTTGATAAGC+TGG - chr5.3:76960299-76960318 MS.gene020721:intron 40.0%
!! GATTGAGAGTGCTAAGTTGA+TGG + chr5.3:76958687-76958706 None:intergenic 40.0%
!! GCTTCATTTTTCACATGAGC+AGG - chr5.3:76960538-76960557 MS.gene020721:intron 40.0%
!! TCCGCTTTATTTGTCAGAGA+TGG - chr5.3:76959750-76959769 MS.gene020721:intron 40.0%
!! TGACGTTAACACTTTTGAGG+GGG - chr5.3:76958359-76958378 MS.gene020721:CDS 40.0%
!! TGTTTTTGCACGTATACTGC+AGG + chr5.3:76959099-76959118 None:intergenic 40.0%
!!! GGGATCTTTCTCTTTTTTGC+TGG - chr5.3:76960824-76960843 MS.gene020721:intron 40.0%
AAGAAGAGGTAAATGCCGCA+AGG + chr5.3:76959164-76959183 None:intergenic 45.0%
AATCCATAACCTGACCGTGA+TGG + chr5.3:76958428-76958447 None:intergenic 45.0%
ACAATTGCCATCACCAACTC+TGG + chr5.3:76960132-76960151 None:intergenic 45.0%
ACTCTGGCCTATACCTTCTT+TGG + chr5.3:76960116-76960135 None:intergenic 45.0%
AGACGCTTCACTATACTCCT+CGG - chr5.3:76960236-76960255 MS.gene020721:intron 45.0%
AGTCAAGTTTGGGGATAACC+AGG - chr5.3:76960583-76960602 MS.gene020721:intron 45.0%
ATGGAGATTATCCCTAGGCT+TGG - chr5.3:76959885-76959904 MS.gene020721:intron 45.0%
CAGGTAATGTGGACAACGAA+AGG - chr5.3:76957554-76957573 MS.gene020721:CDS 45.0%
CTAATGACCGATCAATCTGG+AGG + chr5.3:76958631-76958650 None:intergenic 45.0%
CTCCAGATTGATCGGTCATT+AGG - chr5.3:76958629-76958648 MS.gene020721:CDS 45.0%
CTGTTCTTGCCTGAAACCAA+AGG - chr5.3:76960878-76960897 MS.gene020721:CDS 45.0%
GATAACCAGGAACTCTCCAA+AGG - chr5.3:76960596-76960615 MS.gene020721:intron 45.0%
GATGGATGACCCTTAAAGTC+GGG + chr5.3:76958410-76958429 None:intergenic 45.0%
GGCCAAAGATCAACATTGAG+AGG + chr5.3:76959317-76959336 None:intergenic 45.0%
GTAGCATTTGGATGGTCATG+GGG - chr5.3:76960659-76960678 MS.gene020721:intron 45.0%
GTTTCAAAGCATGGGCTTTG+GGG - chr5.3:76960212-76960231 MS.gene020721:intron 45.0%
TACAAGGACATATGGACGTC+GGG - chr5.3:76959227-76959246 MS.gene020721:CDS 45.0%
TACTGCAAGTACGACAACCA+GGG - chr5.3:76959138-76959157 MS.gene020721:intron 45.0%
TGCCAATGCCGAGCATAATA+CGG + chr5.3:76959338-76959357 None:intergenic 45.0%
TTACTGCAAGTACGACAACC+AGG - chr5.3:76959137-76959156 MS.gene020721:intron 45.0%
TTGGGCGCATTATCATCTCT+AGG - chr5.3:76958496-76958515 MS.gene020721:CDS 45.0%
TTGGGTCTACCCGACTTTAA+GGG - chr5.3:76958398-76958417 MS.gene020721:CDS 45.0%
TTTGGGTCTACCCGACTTTA+AGG - chr5.3:76958397-76958416 MS.gene020721:CDS 45.0%
! AAGAAGGTATAGGCCAGAGT+TGG - chr5.3:76960116-76960135 MS.gene020721:intron 45.0%
! AATAGCCTTTGGAGAGTTCC+TGG + chr5.3:76960604-76960623 None:intergenic 45.0%
! CCGGCTCTTTTAATGACGAT+AGG - chr5.3:76959916-76959935 MS.gene020721:intron 45.0%
! GGCAGAGCTTTATAAAGGGA+GGG - chr5.3:76957576-76957595 MS.gene020721:CDS 45.0%
! TTTCAAAGCATGGGCTTTGG+GGG - chr5.3:76960213-76960232 MS.gene020721:intron 45.0%
!! ATTATGCTCGGCATTGGCAT+TGG - chr5.3:76959339-76959358 MS.gene020721:CDS 45.0%
!! CAACAGTTGATAAGCTGGGA+AGG - chr5.3:76960304-76960323 MS.gene020721:intron 45.0%
!! CCCATGCTTTGAAACAACAC+CGG + chr5.3:76960207-76960226 None:intergenic 45.0%
!! CCGGTGTTGTTTCAAAGCAT+GGG - chr5.3:76960204-76960223 MS.gene020721:intron 45.0%
!! GCTACAGGAGGATCACTTTT+TGG - chr5.3:76957634-76957653 MS.gene020721:CDS 45.0%
!! TCCGGTGTTGTTTCAAAGCA+TGG - chr5.3:76960203-76960222 MS.gene020721:intron 45.0%
!!! CCCCCTCATGCTTTTTTTGA+AGG - chr5.3:76959723-76959742 MS.gene020721:intron 45.0%
AGGGATAATCTCCATCCCCA+AGG + chr5.3:76959880-76959899 None:intergenic 50.0%
CATCCATCACGGTCAGGTTA+TGG - chr5.3:76958422-76958441 MS.gene020721:CDS 50.0%
CTTGGAACTGTCCAACCAAG+AGG + chr5.3:76960686-76960705 None:intergenic 50.0%
GCATGCATTGTTGCTGCTAC+AGG - chr5.3:76957619-76957638 MS.gene020721:CDS 50.0%
GCTTCAACTGAGCCATCAGT+TGG - chr5.3:76958589-76958608 MS.gene020721:CDS 50.0%
TCAACTGAGCCATCAGTTGG+TGG - chr5.3:76958592-76958611 MS.gene020721:CDS 50.0%
TCATGTTCAATCCTCCTCGC+AGG + chr5.3:76959786-76959805 None:intergenic 50.0%
TGCATTGTTGCTGCTACAGG+AGG - chr5.3:76957622-76957641 MS.gene020721:CDS 50.0%
TGCCATTCTCTTCTACGCTC+CGG - chr5.3:76960185-76960204 MS.gene020721:intron 50.0%
TGGGGATGGAGATTATCCCT+AGG - chr5.3:76959880-76959899 MS.gene020721:intron 50.0%
! CTATACTCCTCGGCTTTGAC+TGG - chr5.3:76960246-76960265 MS.gene020721:intron 50.0%
! GGGCAGAGCTTTATAAAGGG+AGG - chr5.3:76957575-76957594 MS.gene020721:CDS 50.0%
!! CTCGGCATTGGCATTGGATT+TGG - chr5.3:76959345-76959364 MS.gene020721:CDS 50.0%
!! GCTGGTGGGTCTTTTACAAC+AGG - chr5.3:76957535-76957554 MS.gene020721:CDS 50.0%
!! GTATAGGCCAGAGTTGGTGA+TGG - chr5.3:76960122-76960141 MS.gene020721:intron 50.0%
!! TGTGGAGGAAGCATTGGTTC+TGG - chr5.3:76960927-76960946 MS.gene020721:CDS 50.0%
AAGGGTCATCCATCACGGTC+AGG - chr5.3:76958416-76958435 MS.gene020721:CDS 55.0%
CACCGGAGCGTAGAAGAGAA+TGG + chr5.3:76960190-76960209 None:intergenic 55.0%
CCTAGGCTTGGCTGCAATAC+CGG - chr5.3:76959897-76959916 MS.gene020721:intron 55.0%
CGGGCAAGTATCATCAGTGG+TGG - chr5.3:76959246-76959265 MS.gene020721:CDS 55.0%
CGGTATTGCAGCCAAGCCTA+GGG + chr5.3:76959899-76959918 None:intergenic 55.0%
CGTCGGGCAAGTATCATCAG+TGG - chr5.3:76959243-76959262 MS.gene020721:CDS 55.0%
GGCCGTATTATGCTCGGCAT+TGG - chr5.3:76959333-76959352 MS.gene020721:CDS 55.0%
GTTCAATCCTCCTCGCAGGT+GGG + chr5.3:76959782-76959801 None:intergenic 55.0%
TGTTCAATCCTCCTCGCAGG+TGG + chr5.3:76959783-76959802 None:intergenic 55.0%
! TACTCCTCGGCTTTGACTGG+TGG - chr5.3:76960249-76960268 MS.gene020721:intron 55.0%
AACAGGCGGGGTGACTTCCA+TGG - chr5.3:76959050-76959069 MS.gene020721:intron 60.0%
AACGCCACCAGTCAAAGCCG+AGG + chr5.3:76960256-76960275 None:intergenic 60.0%
AATCCTCCTCGCAGGTGGGT+CGG + chr5.3:76959778-76959797 None:intergenic 60.0%
AGGTAAATGCCGCAAGGCCC+TGG + chr5.3:76959158-76959177 None:intergenic 60.0%
CCGGTATTGCAGCCAAGCCT+AGG + chr5.3:76959900-76959919 None:intergenic 60.0%
GGATGGTCATGGGGTCCTCT+TGG - chr5.3:76960668-76960687 MS.gene020721:intron 60.0%
GGTCATGGGGTCCTCTTGGT+TGG - chr5.3:76960672-76960691 MS.gene020721:intron 60.0%
GTACGACAACCAGGGCCTTG+CGG - chr5.3:76959146-76959165 MS.gene020721:CDS 60.0%
!! ATGGCACCGACCCACCTGCG+AGG - chr5.3:76959769-76959788 MS.gene020721:intron 70.0%
! GCACCGACCCACCTGCGAGG+AGG - chr5.3:76959772-76959791 MS.gene020721:intron 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 76957532 76960982 76957532 ID=MS.gene020721
chr5.3 mRNA 76957532 76960982 76957532 ID=MS.gene020721.t1;Parent=MS.gene020721
chr5.3 exon 76960838 76960982 76960838 ID=MS.gene020721.t1.exon1;Parent=MS.gene020721.t1
chr5.3 CDS 76960838 76960982 76960838 ID=cds.MS.gene020721.t1;Parent=MS.gene020721.t1
chr5.3 exon 76959140 76959459 76959140 ID=MS.gene020721.t1.exon2;Parent=MS.gene020721.t1
chr5.3 CDS 76959140 76959459 76959140 ID=cds.MS.gene020721.t1;Parent=MS.gene020721.t1
chr5.3 exon 76958143 76958769 76958143 ID=MS.gene020721.t1.exon3;Parent=MS.gene020721.t1
chr5.3 CDS 76958143 76958769 76958143 ID=cds.MS.gene020721.t1;Parent=MS.gene020721.t1
chr5.3 exon 76957532 76957954 76957532 ID=MS.gene020721.t1.exon4;Parent=MS.gene020721.t1
chr5.3 CDS 76957532 76957954 76957532 ID=cds.MS.gene020721.t1;Parent=MS.gene020721.t1
Gene Sequence

>MS.gene020721

ATGGCTGGTGGGTCTTTTACAACAGGTAATGTGGACAACGAAAGGGCAGAGCTTTATAAAGGGAGGGTCACTTCTTATGTTATCATTGCATGCATTGTTGCTGCTACAGGAGGATCACTTTTTGGTTATGATGTTGGAATTTCAGGTTCTTGCATAAATTCATTACTTGAATCATAAGTTTTTGTAGTTTTTTGTTTTCAATGCTTTTCATGCTATTTCATTGCATTATATTTTTCTTATTAATCTTTCATGAGTTGAATATCCCACAAGAGATATGAAATTGCATATATGTTGATCTTTATGTGTTTTTTTAAATGAATTTTTAAACTCAATTTGTTGATAAGCCTATTTCCTGATTCTATAAATTATCATTCTTAATTATATTTTCAAACATGAAAATTTAAAACTATTATGGCTTTGTCACCTAAAAATCTAAAAAACCTAGCTGTAATGGTAAACAACAAATTTTTACATCATATTTCAATTTTTTTGGTGTAAACCGACTATTTTCTGGTTGTAACTACAAATACTAATCTCTCGAGCCGTGTATAAATGAAATGGTCGATAAATTTCTCCCTCAAGAAATTTGCCATTGTTTTACTATCAGCTTGCTATAGATGGAAATGCAATCATCCATCATGATAGAATGTTTTATTAAATTATTGATTGTTTCTAATTATCTTCTCCCAAAGCTTAATTCACAACGTTTTTAATCTCAACCGAAGACTTAAGGGTCAAGAATTGGGCAATAACAAGCCACTCCATTGTCAATTATTGGCGACATGGGATGTGATTATATTTCTATCAACAACAAATTGATAATGAAATGACGTTAACACTTTTGAGGGGGATATTTATTGGTCATTTTGGGTCTACCCGACTTTAAGGGTCATCCATCACGGTCAGGTTATGGATTCCTTCAAATTATCTATAAACCACTTCATTATCTATAAAGGCTTGGGACTTGGGCGCATTATCATCTCTAGGTTTCAAGTTTTGAATCCTTTAGATACTAACAATCCATATGTTGGGTCAGTTCATACAAGACTTTGCTCTGGCTTCAACTGAGCCATCAGTTGGTGGATGTTTGATTAGACCTCCAGATTGATCGGTCATTAGGTTGGATATCAAGTTTAAAAAATCTATATAAAACCATCAACTTAGCACTCTCAATCACAAATAATTAAGAAAATATAGCATCACATAAATGTGTACTCTATCAGGAGGAAAATGCATGTAATTATAGCAATGCTACATGCATCCCCAAATTATTTAATTAGTTGTACAAGAAGCTTCAAAACTCAACTCATATCGTCATAAACTAAGGAAAGGGAACTATGTTTCCTTACTGATTTGGTTATCTTAGAATATTTTTCTTGATTTGTTTCCTTATTTCAATAACTTTTAGTCTTAATGTTAGTTGTTAAGATGTTGATGAACCTTACATCCATTTCATTATCTGTTAGAATTTTTTGTGTTCATGGTTTTTTTTTTTCTTCTGATGAATGTTATATGGTTAACAGGCGGGGTGACTTCCATGGATGACTTCCTTAAAGAATTCTTCCCTGCAGTATACGTGCAAAAACAACATGCACATGAAAACAATTACTGCAAGTACGACAACCAGGGCCTTGCGGCATTTACCTCTTCTTTATACATTGCTGGTTTAGTCGCATCCTTGTTTGCATCTACCATTACAAGGACATATGGACGTCGGGCAAGTATCATCAGTGGTGGTATTAGCTTTCTAATTGGATCAGCTGTAAATGCTTCCGCTATTAACCTCTCAATGTTGATCTTTGGCCGTATTATGCTCGGCATTGGCATTGGATTTGGAAATCAGGTAATAACATATTACTCTAATTTAGCTATGATCAATCCTTAAAAGTGTTAAGCTATTGTGTCAAGTATCACATTTTCTATCTATGATGAATTGATGGTCAATACTTAGCAGATAAAACATTTTTTCCTTTATTGGTTTAGAACACAAGTAAATTTTTTCTATGAAAGAAGGAAACTTTGTTTCCAATTTAAAACATATCTCTAGATTAGTCAAACAAGTATCAAATAGTTTGAAGGGAGTTAATTGTTAATAATAATAGCGTAAATGTTAATATTTGTTCATAAAAAATATGGGAAACAATGTATGTTTGAGTTATACCTTGAAAGTTGACAAATATTTTGCGATGTGCCCCCTCATGCTTTTTTTGAAGGCAATTCCGCTTTATTTGTCAGAGATGGCACCGACCCACCTGCGAGGAGGATTGAACATGATGTTTCAAGTGGCAACAACTTTTGCGATTTTCATAGCCAATATGGTGAATTTTGGAACACAAAGGATTAAACCTTGGGGATGGAGATTATCCCTAGGCTTGGCTGCAATACCGGCTCTTTTAATGACGATAGGAGGAATATTTCTTCCCGATACTCCAAACAGCTTAATAGAACGAGGATCACAAGAAAAAGGAAGGAAGCTCCTAGAGAAAATTAGAGGAACTAGCGATGTTGATGCAGAGTTTGAAGATATGGTTGAAGCAAGCGAATTGGCGAACTCAATAAAGCACCCGTTTCGTAACATACTCCAAAGAAGGTATAGGCCAGAGTTGGTGATGGCAATTGTCATGCCAACTTCACAAATCTTAACCGGCATAAATGCCATTCTCTTCTACGCTCCGGTGTTGTTTCAAAGCATGGGCTTTGGGGGAGACGCTTCACTATACTCCTCGGCTTTGACTGGTGGCGTTCTTGCTTGCTCAACATTTATTTCCATTGCAACAGTTGATAAGCTGGGAAGGAGAATTCTTCTTATCAGTGGTGGAATACAAATGATCACATGTCAGGTATGAAAAATTCCGCCTCAAACAAATTCTAATCATGTTTTAAAGATCCACAAACACTTATTATCCTACCCTTTATTTAGTTATAACCAAAAATTATGTTCATACACGAAGTAGTCTAATGCAGAAATGCTTGAAACTGAACAAAAAATTTAGGGCAACTTATTTTGCTTCATTTTTCACATGAGCAGGTTATAGTTGCAATAATTCTTGGAGTCAAGTTTGGGGATAACCAGGAACTCTCCAAAGGCTATTCAATATTGGTTGTAGTTGTGGTTTGCCTATTTGTTGTAGCATTTGGATGGTCATGGGGTCCTCTTGGTTGGACAGTTCCAAGTGAGATATTTCCATTAGAAATTCGTTCAGCAGGGCAAAGTATCACAGTATTTGTAAACCTTTTTTTCACTTTCATAATCGCTCAGGCATTTCTTACTCTTCTATGCTCATTCAAGTTTGGGATCTTTCTCTTTTTTGCTGGTTGGATTATCCTAATGACCATATTTGTTTTTCTGTTCTTGCCTGAAACCAAAGGTATTCCTATTGAAGAGATGACATTTATGTGGAGGAAGCATTGGTTCTGGAAATTGATATTGCCTGAAAACACATCACAATAA
Protein sequence

>MS.gene020721.t1

MAGGSFTTGNVDNERAELYKGRVTSYVIIACIVAATGGSLFGYDVGISGGVTSMDDFLKEFFPAVYVQKQHAHENNYCKYDNQGLAAFTSSLYIAGLVASLFASTITRTYGRRASIISGGISFLIGSAVNASAINLSMLIFGRIMLGIGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFAIFIANMVNFGTQRIKPWGWRLSLGLAAIPALLMTIGGIFLPDTPNSLIERGSQEKGRKLLEKIRGTSDVDAEFEDMVEASELANSIKHPFRNILQRRYRPELVMAIVMPTSQILTGINAILFYAPVLFQSMGFGGDASLYSSALTGGVLACSTFISIATVDKLGRRILLISGGIQMITCQVIVAIILGVKFGDNQELSKGYSILVVVVVCLFVVAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVFVNLFFTFIIAQAFLTLLCSFKFGIFLFFAGWIILMTIFVFLFLPETKGIPIEEMTFMWRKHWFWKLILPENTSQ