AlfalfaGEDB | MS.gene29240

M. sativa cultivar XinJiangDaYe / MS.gene29240

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29240.t1	XP_003589734.2	97.3	512	14	0	1	512	1	512	1.10E-285	991.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29240.t1	Q9LT15	71.0	510	144	3	1	507	1	509	3.6e-208	725.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29240.t1	G7IBF1	97.3	512	14	0	1	512	1	512	8.0e-286	991.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene29240	MS.gene017905	PPI
MS.gene29240	MS.gene026188	PPI
MS.gene29240	MS.gene018060	PPI
MS.gene29240	MS.gene90685	PPI
MS.gene29240	MS.gene55173	PPI
MS.gene29240	MS.gene00961	PPI
MS.gene29240	MS.gene066530	PPI
MS.gene29240	MS.gene80690	PPI
MS.gene29240	MS.gene004491	PPI
MS.gene29240	MS.gene068273	PPI
MS.gene29240	MS.gene57358	PPI
MS.gene29240	MS.gene072436	PPI
MS.gene29240	MS.gene29241	PPI
MS.gene29240	MS.gene78329	PPI
MS.gene055946	MS.gene29240	PPI
MS.gene026190	MS.gene29240	PPI
MS.gene29240	MS.gene32188	PPI
MS.gene29240	MS.gene006547	PPI
MS.gene29240	MS.gene91109	PPI
MS.gene29240	MS.gene56212	PPI
MS.gene29240	MS.gene24951	PPI
MS.gene29240	MS.gene014127	PPI
MS.gene29240	MS.gene78327	PPI
MS.gene29240	MS.gene064881	PPI
MS.gene29240	MS.gene058372	PPI
MS.gene29240	MS.gene33740	PPI
MS.gene29240	MS.gene009409	PPI
MS.gene29240	MS.gene062929	PPI
MS.gene84416	MS.gene29240	PPI
MS.gene29240	MS.gene052538	PPI
MS.gene29240	MS.gene81380	PPI
MS.gene29240	MS.gene066532	PPI
MS.gene29240	MS.gene57711	PPI
MS.gene29240	MS.gene72918	PPI
MS.gene29240	MS.gene91108	PPI
MS.gene29240	MS.gene011944	PPI
MS.gene29240	MS.gene55171	PPI
MS.gene29240	MS.gene52737	PPI
MS.gene29240	MS.gene98665	PPI
MS.gene29240	MS.gene04694	PPI
MS.gene29240	MS.gene065882	PPI
MS.gene29240	MS.gene006546	PPI
MS.gene29240	MS.gene017222	PPI
MS.gene29240	MS.gene23356	PPI
MS.gene29240	MS.gene48055	PPI
MS.gene29240	MS.gene45698	PPI
MS.gene29240	MS.gene66840	PPI
MS.gene29240	MS.gene88586	PPI
MS.gene29240	MS.gene52719	PPI
MS.gene29240	MS.gene88585	PPI
MS.gene29240	MS.gene88587	PPI
MS.gene29240	MS.gene30558	PPI
MS.gene006547	MS.gene29240	PPI
MS.gene29240	MS.gene003775	PPI
MS.gene29240	MS.gene060358	PPI
MS.gene29240	MS.gene78328	PPI
MS.gene29240	MS.gene29303	PPI
MS.gene29240	MS.gene24272	PPI
MS.gene29240	MS.gene004000	PPI
MS.gene29240	MS.gene020721	PPI
MS.gene29240	MS.gene068492	PPI
MS.gene29240	MS.gene069970	PPI
MS.gene25807	MS.gene29240	PPI
MS.gene29240	MS.gene044198	PPI
MS.gene29240	MS.gene041500	PPI
MS.gene29240	MS.gene80819	PPI
MS.gene29240	MS.gene42509	PPI
MS.gene29240	MS.gene63888	PPI
MS.gene29240	MS.gene002806	PPI
MS.gene29240	MS.gene018043	PPI
MS.gene29240	MS.gene014297	PPI
MS.gene29240	MS.gene58760	PPI
MS.gene29304	MS.gene29240	PPI
MS.gene29240	MS.gene47969	PPI
MS.gene29240	MS.gene50704	PPI
MS.gene29240	MS.gene78842	PPI
MS.gene29240	MS.gene27999	PPI
MS.gene29240	MS.gene32215	PPI
MS.gene29240	MS.gene003641	PPI
MS.gene29240	MS.gene29239	PPI
MS.gene70727	MS.gene29240	PPI
MS.gene29240	MS.gene073258	PPI
MS.gene062929	MS.gene29240	PPI
MS.gene29240	MS.gene021157	PPI
MS.gene27308	MS.gene29240	PPI
MS.gene29240	MS.gene066531	PPI
MS.gene29240	MS.gene031757	PPI
MS.gene29240	MS.gene049813	PPI
MS.gene29240	MS.gene26272	PPI
MS.gene29240	MS.gene036548	PPI
MS.gene29240	MS.gene04695	PPI
MS.gene29240	MS.gene041419	PPI
MS.gene29240	MS.gene50065	PPI
MS.gene29240	MS.gene33406	PPI
MS.gene29240	MS.gene04674	PPI
MS.gene29240	MS.gene28665	PPI
MS.gene29240	MS.gene28482	PPI
MS.gene29240	MS.gene91107	PPI
MS.gene29240	MS.gene26968	PPI
MS.gene29240	MS.gene056687	PPI
MS.gene29240	MS.gene41130	PPI
MS.gene030874	MS.gene29240	PPI
MS.gene29240	MS.gene56211	PPI
MS.gene29240	MS.gene42511	PPI
MS.gene29240	MS.gene065799	PPI
MS.gene29240	MS.gene29636	PPI
MS.gene29240	MS.gene76380	PPI
MS.gene29240	MS.gene026189	PPI
MS.gene29240	MS.gene036638	PPI
MS.gene29240	MS.gene072437	PPI
MS.gene29240	MS.gene87411	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29240.t1	MTR_1g038630	97.266	512	14	0	1	512	1	512	0.0	1021
MS.gene29240.t1	MTR_1g038600	94.141	512	12	1	1	512	1	494	0.0	978
MS.gene29240.t1	MTR_5g082540	78.304	507	110	0	1	507	1	507	0.0	813
MS.gene29240.t1	MTR_4g091370	64.706	493	168	4	13	500	13	504	0.0	615
MS.gene29240.t1	MTR_3g008160	59.109	494	196	4	13	503	13	503	0.0	607
MS.gene29240.t1	MTR_0009s0370	59.000	500	200	3	1	497	1	498	0.0	600
MS.gene29240.t1	MTR_5g041550	62.124	499	185	3	3	497	2	500	0.0	598
MS.gene29240.t1	MTR_3g093010	59.608	510	200	3	3	506	2	511	0.0	597
MS.gene29240.t1	MTR_4g090600	62.475	493	180	4	11	500	11	501	0.0	588
MS.gene29240.t1	MTR_5g006070	55.689	501	212	4	14	511	13	506	0.0	585
MS.gene29240.t1	MTR_0204s0020	56.173	486	208	3	14	498	12	493	0.0	580
MS.gene29240.t1	MTR_0204s0020	55.761	486	207	4	14	498	12	490	0.0	571
MS.gene29240.t1	MTR_5g094760	54.563	504	219	4	3	500	2	501	0.0	571
MS.gene29240.t1	MTR_3g023480	57.959	490	203	2	14	500	12	501	0.0	568
MS.gene29240.t1	MTR_1g104770	55.600	500	218	3	1	497	1	499	0.0	567
MS.gene29240.t1	MTR_1g104750	54.200	500	224	4	1	497	1	498	0.0	563
MS.gene29240.t1	MTR_7g091690	56.289	485	207	4	15	498	19	499	0.0	562
MS.gene29240.t1	MTR_3g008170	56.687	501	210	5	1	497	1	498	0.0	558
MS.gene29240.t1	MTR_3g008160	59.081	457	181	4	50	503	1	454	0.0	554
MS.gene29240.t1	MTR_6g087040	53.346	508	229	5	1	503	1	505	0.0	546
MS.gene29240.t1	MTR_6g088375	53.346	508	229	5	1	503	1	505	0.0	546
MS.gene29240.t1	MTR_4g116790	51.303	499	238	4	2	499	6	500	0.0	543
MS.gene29240.t1	MTR_1g104780	54.274	503	221	4	13	507	12	513	0.0	540
MS.gene29240.t1	MTR_0204s0040	51.600	500	237	4	4	502	10	505	0.0	538
MS.gene29240.t1	MTR_8g102860	53.479	503	226	5	15	512	18	517	0.0	538
MS.gene29240.t1	MTR_5g006070	55.699	465	196	4	50	511	1	458	0.0	536
MS.gene29240.t1	MTR_4g116770	51.600	500	237	4	4	502	206	701	0.0	536
MS.gene29240.t1	MTR_3g007910	55.315	508	191	7	3	506	2	477	0.0	533
MS.gene29240.t1	MTR_3g093060	58.980	451	181	3	50	496	1	451	0.0	517
MS.gene29240.t1	MTR_3g074390	49.287	491	245	3	14	502	19	507	9.83e-178	509
MS.gene29240.t1	MTR_3g074410	48.790	496	249	4	14	507	16	508	9.64e-172	494
MS.gene29240.t1	MTR_8g102860	52.778	468	213	5	50	512	1	465	1.28e-171	492
MS.gene29240.t1	MTR_3g074270	46.988	498	241	3	1	497	1	476	1.46e-165	478
MS.gene29240.t1	MTR_4g116790	51.381	362	173	3	2	362	6	365	6.57e-133	390
MS.gene29240.t1	MTR_3g074380	49.858	351	172	3	14	362	17	365	1.31e-121	361
MS.gene29240.t1	MTR_3g074320	45.714	315	169	2	189	501	20	334	1.82e-100	306
MS.gene29240.t1	MTR_3g074340	45.397	315	170	2	189	501	20	334	1.89e-99	303
MS.gene29240.t1	MTR_3g074370	45.397	315	170	2	189	501	20	334	2.70e-99	303
MS.gene29240.t1	MTR_3g074400	37.391	460	227	12	50	485	1	423	1.58e-86	273
MS.gene29240.t1	MTR_1g038620	80.380	158	14	1	203	360	50	190	6.05e-80	248
MS.gene29240.t1	MTR_4g069500	28.298	523	323	9	1	495	1	499	3.28e-58	201
MS.gene29240.t1	MTR_6g088450	30.372	484	285	11	13	476	48	499	1.34e-56	197
MS.gene29240.t1	MTR_4g072030	29.505	505	304	12	27	508	31	506	1.92e-55	194
MS.gene29240.t1	MTR_4g069500	30.000	440	284	6	77	495	13	449	5.29e-55	192
MS.gene29240.t1	MTR_5g096000	54.144	181	63	1	3	183	2	162	6.34e-54	184
MS.gene29240.t1	MTR_5g096000	56.329	158	63	3	355	506	151	308	5.28e-39	144
MS.gene29240.t1	MTR_3g084110	27.621	496	326	9	20	507	25	495	6.56e-53	187
MS.gene29240.t1	MTR_3g116240	27.723	505	314	10	7	484	8	488	8.41e-53	187
MS.gene29240.t1	MTR_5g075300	31.496	508	294	12	7	487	2	482	1.61e-52	186
MS.gene29240.t1	MTR_6g018790	29.645	479	298	8	16	490	102	545	2.77e-52	186
MS.gene29240.t1	MTR_1g116660	27.521	476	316	9	21	490	33	485	4.75e-51	182
MS.gene29240.t1	MTR_7g446340	27.181	493	314	12	12	490	44	505	5.03e-51	182
MS.gene29240.t1	MTR_6g007340	27.181	493	314	12	12	490	44	505	5.03e-51	182
MS.gene29240.t1	MTR_8g103500	29.032	496	299	13	13	487	8	471	6.90e-51	181
MS.gene29240.t1	MTR_1g116650	28.092	477	301	9	20	490	75	515	6.03e-50	179
MS.gene29240.t1	MTR_7g005910	27.521	476	317	7	20	490	30	482	1.29e-49	178
MS.gene29240.t1	MTR_1g114280	59.091	154	44	2	346	499	21	155	1.45e-49	167
MS.gene29240.t1	MTR_8g077890	29.234	496	290	11	22	487	18	482	1.51e-49	177
MS.gene29240.t1	MTR_7g082270	28.541	473	301	8	16	485	62	500	2.51e-49	177
MS.gene29240.t1	MTR_5g077580	26.270	571	303	13	21	500	24	567	4.46e-47	172
MS.gene29240.t1	MTR_2g013310	28.125	480	304	12	22	489	52	502	7.26e-47	171
MS.gene29240.t1	MTR_2g013310	30.340	412	267	10	90	489	26	429	2.28e-46	168
MS.gene29240.t1	MTR_2g048720	33.036	336	201	5	21	351	24	340	1.01e-45	169
MS.gene29240.t1	MTR_4g077740	29.299	471	290	9	31	484	53	497	1.28e-44	164
MS.gene29240.t1	MTR_7g082270	28.706	425	269	7	16	440	62	452	3.81e-44	162
MS.gene29240.t1	MTR_2g049020	29.096	354	226	5	21	367	24	359	6.49e-44	164
MS.gene29240.t1	MTR_2g026160	30.145	345	207	7	20	351	24	347	2.40e-41	156
MS.gene29240.t1	MTR_0064s0040	50.000	150	61	2	13	162	14	149	3.92e-41	145
MS.gene29240.t1	MTR_7g113970	27.623	467	301	8	21	484	60	492	5.85e-41	154
MS.gene29240.t1	MTR_1g022315	27.505	469	309	8	23	488	49	489	9.34e-41	153
MS.gene29240.t1	MTR_3g074330	47.500	160	75	2	1	153	1	158	1.18e-40	144
MS.gene29240.t1	MTR_3g074360	47.500	160	75	2	1	153	1	158	1.18e-40	144
MS.gene29240.t1	MTR_3g074310	47.500	160	75	2	1	153	1	158	2.97e-40	144
MS.gene29240.t1	MTR_1g022315	28.463	397	274	5	95	488	1	390	7.81e-40	149
MS.gene29240.t1	MTR_8g077300	27.907	473	295	11	22	484	38	474	5.79e-39	148
MS.gene29240.t1	MTR_7g094450	27.623	467	302	9	21	484	37	470	9.99e-39	147
MS.gene29240.t1	MTR_8g077310	26.013	469	317	6	18	484	42	482	1.42e-38	147
MS.gene29240.t1	MTR_7g094110	28.017	464	299	8	23	484	42	472	2.03e-37	144
MS.gene29240.t1	MTR_5g020270	26.752	471	301	9	23	484	50	485	4.54e-37	143
MS.gene29240.t1	MTR_7g113960	27.273	407	272	8	84	484	67	455	9.94e-37	142
MS.gene29240.t1	MTR_8g077310	27.041	392	277	4	95	484	1	385	2.20e-36	139
MS.gene29240.t1	MTR_4g118610	26.763	482	313	8	13	489	42	488	3.59e-36	140
MS.gene29240.t1	MTR_2g020710	25.153	489	324	8	2	484	28	480	7.95e-36	139
MS.gene29240.t1	MTR_5g019870	27.356	435	289	9	77	487	48	479	3.31e-35	138
MS.gene29240.t1	MTR_2g020710	26.355	406	278	6	85	484	1	391	4.07e-35	135
MS.gene29240.t1	MTR_5g020270	27.569	399	266	7	95	484	1	385	8.97e-35	135
MS.gene29240.t1	MTR_4g069500	28.939	311	199	5	204	495	3	310	1.55e-32	127
MS.gene29240.t1	MTR_7g094110	27.253	466	280	10	23	484	42	452	6.01e-31	125
MS.gene29240.t1	MTR_8g077310	28.205	351	222	6	18	366	42	364	6.40e-31	124
MS.gene29240.t1	MTR_3g080240	25.610	410	281	11	89	489	139	533	2.15e-30	124
MS.gene29240.t1	MTR_2g026140	28.696	345	197	9	20	351	24	332	7.66e-30	123
MS.gene29240.t1	MTR_4g064820	27.577	359	229	5	23	364	96	440	2.59e-29	121
MS.gene29240.t1	MTR_5g020270	24.841	471	289	10	23	484	50	464	2.77e-29	120
MS.gene29240.t1	MTR_2g020710	25.476	420	271	8	2	415	28	411	9.58e-29	118
MS.gene29240.t1	MTR_7g113970	28.529	333	207	6	21	351	60	363	1.24e-28	118
MS.gene29240.t1	MTR_4g118610	27.073	410	259	8	13	417	42	416	2.26e-28	117
MS.gene29240.t1	MTR_4g013205	25.255	392	282	4	94	484	88	469	3.07e-28	117
MS.gene29240.t1	MTR_6g087910	25.160	469	309	9	21	484	52	483	1.49e-27	115
MS.gene29240.t1	MTR_2g020710	25.359	418	270	8	2	413	28	409	3.15e-27	114
MS.gene29240.t1	MTR_7g113960	29.603	277	179	5	84	355	67	332	4.13e-27	113
MS.gene29240.t1	MTR_2g020710	25.606	371	238	7	2	366	28	366	6.60e-25	106
MS.gene29240.t1	MTR_3g116060	31.414	191	125	3	75	259	31	221	2.02e-19	92.4
MS.gene29240.t1	MTR_5g024740	26.667	240	153	5	23	259	4	223	1.70e-18	89.4
MS.gene29240.t1	MTR_8g073100	25.078	319	197	9	23	333	4	288	6.45e-18	87.4
MS.gene29240.t1	MTR_5g044910	28.814	177	124	2	85	259	47	223	3.54e-17	85.1
MS.gene29240.t1	MTR_3g118530	30.588	170	116	2	92	259	54	223	5.67e-16	81.6
MS.gene29240.t1	MTR_3g118530	30.994	171	116	2	92	260	54	224	1.33e-15	80.1
MS.gene29240.t1	MTR_4g030040	28.177	181	126	3	88	266	121	299	1.40e-11	67.0
MS.gene29240.t1	MTR_4g030040	28.177	181	126	3	88	266	120	298	1.64e-11	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29240.t1	AT3G19940	71.748	492	137	2	19	509	21	511	0.0	739
MS.gene29240.t1	AT1G50310	70.363	496	143	4	19	511	21	515	0.0	719
MS.gene29240.t1	AT5G23270	67.134	499	161	2	1	496	1	499	0.0	684
MS.gene29240.t1	AT3G19930	65.415	506	170	3	3	505	2	505	0.0	675
MS.gene29240.t1	AT3G19930	65.415	506	170	3	3	505	2	505	0.0	675
MS.gene29240.t1	AT1G11260	61.554	502	189	3	1	499	1	501	0.0	639
MS.gene29240.t1	AT4G21480	63.190	489	178	2	10	497	10	497	0.0	616
MS.gene29240.t1	AT5G26340	57.455	503	210	3	1	500	1	502	0.0	605
MS.gene29240.t1	AT4G02050	55.159	504	217	5	1	499	1	500	0.0	573
MS.gene29240.t1	AT4G02050	55.159	504	217	5	1	499	1	500	0.0	573
MS.gene29240.t1	AT1G77210	53.770	504	225	5	1	499	1	501	0.0	547
MS.gene29240.t1	AT1G77210	53.770	504	225	5	1	499	1	501	0.0	547
MS.gene29240.t1	AT1G50310	71.191	361	101	3	153	510	11	371	0.0	539
MS.gene29240.t1	AT1G34580	50.800	500	239	3	2	496	3	500	0.0	531
MS.gene29240.t1	AT5G26250	53.388	487	221	4	13	497	12	494	0.0	530
MS.gene29240.t1	AT3G05960	51.503	499	233	5	7	500	5	499	0.0	520
MS.gene29240.t1	AT5G61520	51.860	484	226	3	17	495	18	499	6.01e-176	505
MS.gene29240.t1	AT1G07340	53.082	503	227	6	1	499	1	498	9.08e-176	504
MS.gene29240.t1	AT1G34580	51.106	452	214	3	50	496	1	450	5.81e-168	483
MS.gene29240.t1	AT5G61520	51.770	452	211	3	49	495	2	451	2.11e-160	464
MS.gene29240.t1	AT1G77210	54.441	349	155	4	153	499	6	352	6.56e-130	382
MS.gene29240.t1	AT2G16120	29.577	497	305	9	16	490	19	492	1.58e-56	197
MS.gene29240.t1	AT3G18830	28.846	520	306	12	22	512	35	519	4.80e-55	193
MS.gene29240.t1	AT4G36670	30.785	497	288	12	19	488	13	480	6.45e-55	192
MS.gene29240.t1	AT2G16130	29.175	497	307	9	16	490	19	492	1.20e-54	192
MS.gene29240.t1	AT2G18480	29.895	475	282	12	37	487	36	483	2.35e-54	191
MS.gene29240.t1	AT2G20780	28.690	481	304	10	18	488	50	501	2.04e-50	181
MS.gene29240.t1	AT5G16150	29.237	472	301	7	16	484	98	539	1.41e-49	179
MS.gene29240.t1	AT5G16150	29.237	472	301	7	16	484	98	539	1.41e-49	179
MS.gene29240.t1	AT5G16150	29.237	472	301	7	16	484	98	539	1.41e-49	179
MS.gene29240.t1	AT2G20780	30.244	410	268	8	89	488	42	443	7.32e-47	170
MS.gene29240.t1	AT2G43330	28.481	474	313	7	22	490	30	482	8.81e-47	170
MS.gene29240.t1	AT1G30220	30.383	339	211	5	20	351	25	345	1.29e-45	168
MS.gene29240.t1	AT5G59250	27.859	481	303	8	23	484	98	553	3.46e-44	164
MS.gene29240.t1	AT5G17010	28.085	470	297	8	31	484	55	499	2.24e-42	158
MS.gene29240.t1	AT5G17010	28.085	470	297	8	31	484	55	499	2.24e-42	158
MS.gene29240.t1	AT5G17010	28.085	470	297	8	31	484	55	499	2.24e-42	158
MS.gene29240.t1	AT1G08930	27.463	477	299	10	16	484	51	488	2.79e-42	157
MS.gene29240.t1	AT1G08930	27.463	477	299	10	16	484	51	488	2.79e-42	157
MS.gene29240.t1	AT2G35740	29.577	355	222	6	21	365	24	360	1.78e-41	157
MS.gene29240.t1	AT1G75220	27.143	490	318	7	1	488	35	487	1.86e-41	155
MS.gene29240.t1	AT3G05155	25.895	475	315	9	13	485	17	456	3.51e-41	154
MS.gene29240.t1	AT1G08900	28.818	406	269	7	84	484	23	413	4.98e-41	152
MS.gene29240.t1	AT1G08890	28.256	407	272	8	84	485	67	458	7.27e-41	153
MS.gene29240.t1	AT1G08900	28.818	406	269	7	84	484	57	447	8.98e-41	152
MS.gene29240.t1	AT1G08900	28.818	406	269	7	84	484	65	455	1.39e-40	152
MS.gene29240.t1	AT1G08900	28.818	406	269	7	84	484	65	455	1.39e-40	152
MS.gene29240.t1	AT1G54730	25.813	461	303	8	28	484	37	462	1.42e-40	152
MS.gene29240.t1	AT4G16480	28.691	359	222	6	20	365	24	361	2.52e-39	151
MS.gene29240.t1	AT4G16480	28.691	359	222	6	20	365	24	361	2.52e-39	151
MS.gene29240.t1	AT4G16480	28.691	359	222	6	20	365	24	361	2.52e-39	151
MS.gene29240.t1	AT5G18840	26.237	465	307	7	23	484	44	475	3.14e-39	149
MS.gene29240.t1	AT1G19450	27.176	471	307	7	23	488	49	488	3.72e-39	149
MS.gene29240.t1	AT3G03090	27.872	470	298	8	31	484	55	499	3.88e-39	149
MS.gene29240.t1	AT5G27360	26.556	482	303	11	13	484	25	465	1.06e-38	147
MS.gene29240.t1	AT3G05165	26.216	473	310	8	16	484	23	460	1.56e-38	147
MS.gene29240.t1	AT3G05165	26.216	473	310	8	16	484	23	460	1.56e-38	147
MS.gene29240.t1	AT3G05165	26.216	473	310	8	16	484	23	460	1.56e-38	147
MS.gene29240.t1	AT5G27360	26.556	482	303	11	13	484	73	513	2.37e-38	147
MS.gene29240.t1	AT3G05160	27.061	473	306	9	16	484	14	451	2.00e-37	144
MS.gene29240.t1	AT2G48020	27.696	408	275	7	84	486	68	460	2.67e-37	143
MS.gene29240.t1	AT2G48020	27.696	408	275	7	84	486	68	460	2.67e-37	143
MS.gene29240.t1	AT5G27350	25.726	482	307	9	13	484	21	461	4.11e-37	143
MS.gene29240.t1	AT3G05150	26.846	447	297	9	59	497	58	482	1.18e-36	142
MS.gene29240.t1	AT3G05150	26.914	431	288	8	59	484	58	466	2.38e-36	140
MS.gene29240.t1	AT3G05150	26.914	431	288	8	59	484	58	466	2.38e-36	140
MS.gene29240.t1	AT3G05160	27.830	424	280	8	65	484	1	402	8.52e-36	138
MS.gene29240.t1	AT3G05160	27.830	424	280	8	65	484	1	402	8.52e-36	138
MS.gene29240.t1	AT3G05400	25.420	476	316	10	13	484	16	456	1.63e-35	138
MS.gene29240.t1	AT1G08920	26.186	485	295	12	16	484	25	462	5.24e-34	134
MS.gene29240.t1	AT1G08920	26.392	485	301	12	16	484	25	469	5.98e-34	134
MS.gene29240.t1	AT1G54730	24.837	459	289	10	28	484	37	441	1.12e-33	133
MS.gene29240.t1	AT4G04750	26.096	479	314	11	10	484	26	468	1.86e-33	133
MS.gene29240.t1	AT4G04750	26.096	479	314	11	10	484	26	468	1.86e-33	133
MS.gene29240.t1	AT1G54730	25.298	419	274	8	28	442	37	420	2.51e-33	131
MS.gene29240.t1	AT4G04750	26.096	479	314	11	10	484	70	512	4.03e-33	132
MS.gene29240.t1	AT3G05165	25.556	450	296	8	16	461	23	437	1.35e-32	130
MS.gene29240.t1	AT1G08900	27.989	368	245	7	84	446	65	417	1.37e-32	129
MS.gene29240.t1	AT4G04760	26.230	427	290	7	65	486	1	407	2.23e-32	129
MS.gene29240.t1	AT4G04760	25.858	437	299	7	59	490	54	470	2.49e-32	129
MS.gene29240.t1	AT3G05165	26.265	415	267	8	16	426	23	402	4.29e-32	129
MS.gene29240.t1	AT3G05165	26.265	415	267	8	16	426	23	402	4.29e-32	129
MS.gene29240.t1	AT1G54730	26.087	391	250	8	28	414	37	392	1.71e-31	126
MS.gene29240.t1	AT1G54730	26.087	391	250	8	28	414	37	392	1.71e-31	126
MS.gene29240.t1	AT1G79820	25.630	476	304	12	18	484	53	487	7.13e-31	125
MS.gene29240.t1	AT1G79820	25.630	476	304	12	18	484	53	487	7.13e-31	125
MS.gene29240.t1	AT5G27360	26.914	405	245	11	14	408	26	389	5.10e-30	122
MS.gene29240.t1	AT5G27360	26.509	381	250	8	114	484	1	361	9.41e-30	120
MS.gene29240.t1	AT5G27360	26.509	381	250	8	114	484	1	361	9.41e-30	120
MS.gene29240.t1	AT1G05030	24.946	465	305	12	29	484	85	514	1.09e-29	122
MS.gene29240.t1	AT3G05400	26.712	438	285	13	66	484	16	436	2.15e-29	120
MS.gene29240.t1	AT1G08920	25.951	447	268	12	16	446	25	424	2.95e-29	120
MS.gene29240.t1	AT4G04760	25.459	436	291	8	59	486	54	463	4.09e-29	120
MS.gene29240.t1	AT3G05155	25.000	340	223	6	13	351	17	325	4.91e-29	117
MS.gene29240.t1	AT1G54730	26.994	326	207	6	28	351	37	333	1.03e-28	117
MS.gene29240.t1	AT1G05030	25.182	413	287	9	80	484	64	462	1.49e-28	118
MS.gene29240.t1	AT1G67300	24.790	476	304	11	21	484	53	486	2.39e-28	118
MS.gene29240.t1	AT1G67300	24.790	476	304	11	21	484	53	486	2.39e-28	118
MS.gene29240.t1	AT1G67300	24.895	474	307	11	21	484	53	487	7.48e-28	117
MS.gene29240.t1	AT1G67300	24.882	422	264	10	21	431	53	432	4.95e-27	114
MS.gene29240.t1	AT1G67300	24.882	422	264	10	21	431	53	432	4.95e-27	114
MS.gene29240.t1	AT1G67300	25.882	340	210	8	21	351	53	359	8.98e-27	112
MS.gene29240.t1	AT1G67300	25.882	340	210	8	21	351	53	359	8.98e-27	112
MS.gene29240.t1	AT1G54730	24.221	417	260	10	28	442	37	399	1.18e-26	112
MS.gene29240.t1	AT1G79820	25.355	422	266	11	18	431	53	433	2.64e-26	112
MS.gene29240.t1	AT2G48020	29.066	289	190	5	84	370	68	343	1.29e-25	108
MS.gene29240.t1	AT1G54730	26.000	300	194	5	28	325	37	310	1.64e-25	107
MS.gene29240.t1	AT1G54730	26.000	300	194	5	28	325	37	310	1.64e-25	107
MS.gene29240.t1	AT2G48020	29.259	270	181	4	84	351	68	329	4.64e-25	106
MS.gene29240.t1	AT1G54730	24.936	389	236	10	28	414	37	371	5.61e-25	107
MS.gene29240.t1	AT3G51490	28.870	239	149	5	23	259	4	223	5.28e-23	103
MS.gene29240.t1	AT3G51490	28.870	239	149	5	23	259	4	223	5.63e-23	103
MS.gene29240.t1	AT5G17010	25.478	471	248	14	31	484	52	436	6.31e-23	101
MS.gene29240.t1	AT3G20460	20.723	415	291	7	84	484	93	483	9.67e-22	98.6
MS.gene29240.t1	AT3G51490	34.104	173	111	3	89	259	2	173	1.58e-21	99.0
MS.gene29240.t1	AT1G79820	23.739	476	265	10	18	484	53	439	2.50e-21	97.1
MS.gene29240.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.35e-17	86.7
MS.gene29240.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.35e-17	86.7
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.33e-17	85.5
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.60e-17	85.1
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.60e-17	85.1
MS.gene29240.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.60e-17	85.1
MS.gene29240.t1	AT1G79820	23.944	355	199	7	137	484	87	377	8.97e-16	79.7

Find 102 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGATTTGTAGGTTATTAT+TGG	0.155816	1.1:+23179620	MS.gene29240:intron
CTTATTGGTGCAATACTAAA+TGG	0.189051	1.1:+23178423	MS.gene29240:CDS
GGTTATGATCTTGGTATTAC+TGG	0.224651	1.1:+23178171	MS.gene29240:CDS
ATAATTGGTCGTCTACTTCT+AGG	0.240972	1.1:+23178471	MS.gene29240:CDS
CGCAAGGCCTCGATGTTTCT+TGG	0.247718	1.1:+23178387	MS.gene29240:CDS
GTCTTCACAGTAGACAAATT+TGG	0.247973	1.1:+23179436	MS.gene29240:CDS
GCCTCTTTCAATCAAGGAAT+TGG	0.266641	1.1:-23179098	None:intergenic
ATCCTAATTGCATCAAAGTT+TGG	0.279050	1.1:+23179644	MS.gene29240:CDS
TCTGGAAGTCACATTGGTTT+TGG	0.285918	1.1:+23180005	MS.gene29240:CDS
TGGAGAGTCTCTTTGGGTCT+TGG	0.294554	1.1:+23179022	MS.gene29240:CDS
AAATGGATGGAGAGTCTCTT+TGG	0.299432	1.1:+23179015	MS.gene29240:CDS
TGCTGCATTTGCATGGTCTT+GGG	0.301815	1.1:+23179736	MS.gene29240:CDS
GCCGCAAATCTGATTAATTA+TGG	0.310183	1.1:+23178977	MS.gene29240:CDS
AACGTTGAAATGCTAATAAT+TGG	0.313941	1.1:+23178456	MS.gene29240:CDS
ACTCTATTCATTTCTTCAAT+TGG	0.314434	1.1:-23179983	None:intergenic
ATGCTTTGTCACTTGAAGTT+TGG	0.316796	1.1:+23179881	MS.gene29240:CDS
TTGCTGCATTTGCATGGTCT+TGG	0.324406	1.1:+23179735	MS.gene29240:CDS
CTCACAAATGTTTATTTGTC+AGG	0.326178	1.1:+23179486	MS.gene29240:CDS
CTATCAATGCAGCAAGGTAT+AGG	0.331989	1.1:-23178326	None:intergenic
ATCCAAACTTTGATGCAATT+AGG	0.340688	1.1:-23179646	None:intergenic
CCGTTCTTCCAACAACTTAC+CGG	0.340791	1.1:+23179292	MS.gene29240:CDS
CATTTAGTATTGCACCAATA+AGG	0.345996	1.1:-23178422	None:intergenic
TGCATGGTCTTGGGGACCAT+TGG	0.347323	1.1:+23179745	MS.gene29240:CDS
GGTCGTCTACTTCTAGGATT+TGG	0.352688	1.1:+23178477	MS.gene29240:CDS
CTCTATTCATTTCTTCAATT+GGG	0.356482	1.1:-23179982	None:intergenic
AAGTGAAATTTGCGCTTTAG+AGG	0.361431	1.1:+23179781	MS.gene29240:CDS
GTGAGTTGAGGCCTATATTC+TGG	0.368775	1.1:-23179253	None:intergenic
ACCAGTGTATTTATCTGAAA+TGG	0.371561	1.1:+23178889	MS.gene29240:CDS
CTCATGTCTGCGGTTATTAG+TGG	0.373226	1.1:+23179382	MS.gene29240:CDS
TACCAATTGTAATCATCATT+TGG	0.376785	1.1:-23178949	None:intergenic
TGGTGGTGGTAATAACAAAA+AGG	0.387545	1.1:+23180054	MS.gene29240:CDS
CCTCTTTCAATCAAGGAATT+GGG	0.388947	1.1:-23179097	None:intergenic
CAAAGCCTAAGATCTTAAAA+AGG	0.389887	1.1:-23179345	None:intergenic
GCATGGTCTTGGGGACCATT+GGG	0.399402	1.1:+23179746	MS.gene29240:CDS
TATCAATGCAGCAAGGTATA+GGG	0.416508	1.1:-23178325	None:intergenic
AAACATGTCATTAACACATA+TGG	0.418399	1.1:-23178120	None:intergenic
GAGAAGGTCGGCTTCACCTT+TGG	0.418457	1.1:-23179690	None:intergenic
GGTCTTGGGGACCATTGGGT+TGG	0.420130	1.1:+23179750	MS.gene29240:CDS
ATGGTTGCCTCTTTCAATCA+AGG	0.423463	1.1:-23179104	None:intergenic
CATTAATGCCGGTAAGTTGT+TGG	0.423967	1.1:-23179300	None:intergenic
CCCAATTCCTTGATTGAAAG+AGG	0.424552	1.1:+23179097	MS.gene29240:CDS
TTGGGGACCATTGGGTTGGT+TGG	0.425742	1.1:+23179754	MS.gene29240:CDS
ACCATAATTAATCAGATTTG+CGG	0.426945	1.1:-23178978	None:intergenic
TGTGATTGTGGAAGCAAAGA+AGG	0.428707	1.1:-23178352	None:intergenic
TCTTGATCAAATTCTTTCCT+CGG	0.432055	1.1:+23178217	MS.gene29240:CDS
ACATTACTCAACCAGAATAT+AGG	0.435284	1.1:+23179242	MS.gene29240:CDS
CCTAGACACAAAAGAATTGC+TGG	0.439430	1.1:-23179052	None:intergenic
CTTGATCAAATTCTTTCCTC+GGG	0.441826	1.1:+23178218	MS.gene29240:CDS
TTCCAAATGATGATTACAAT+TGG	0.443048	1.1:+23178947	MS.gene29240:CDS
TTGAAGAAATGAATAGAGTC+TGG	0.449094	1.1:+23179987	MS.gene29240:CDS
GCTTTAGAGGTTCGACCAGC+AGG	0.455770	1.1:+23179794	MS.gene29240:CDS
CAGTAGACAAATTTGGAAGA+AGG	0.456163	1.1:+23179443	MS.gene29240:CDS
AATGGATGGAGAGTCTCTTT+GGG	0.457369	1.1:+23179016	MS.gene29240:CDS
ACATTTATAGCTTGACCTGC+TGG	0.465665	1.1:-23179809	None:intergenic
AAGCAAAGGCAATGTTGAAA+AGG	0.468116	1.1:+23179131	MS.gene29240:CDS
TCAAGTGACAAAGCATGGTT+AGG	0.470864	1.1:-23179874	None:intergenic
GCATCAAAGTTTGGATTGAC+CGG	0.473334	1.1:+23179653	MS.gene29240:CDS
CCTGATCATGTTGTTGGTGG+TGG	0.485076	1.1:+23180040	MS.gene29240:CDS
CCACCACCAACAACATGATC+AGG	0.485601	1.1:-23180040	None:intergenic
TACTGGAGGAGTGACTTCTA+TGG	0.491588	1.1:+23178188	MS.gene29240:CDS
TGCTAGTGAAGAAGCTAGTA+AGG	0.497047	1.1:+23179201	MS.gene29240:CDS
TTCCACAATCACAAGAATGA+TGG	0.497068	1.1:+23178362	MS.gene29240:CDS
GGTTGAGTAATGTTCTTCCA+TGG	0.497635	1.1:-23179232	None:intergenic
TTTGGTAAATGATCCTTGTC+CGG	0.509153	1.1:-23179672	None:intergenic
AAGTTTGGATTGACCGGACA+AGG	0.515034	1.1:+23179659	MS.gene29240:CDS
AAGAAGGTTATTATTTCTTG+AGG	0.518335	1.1:+23179459	MS.gene29240:CDS
TATGTTCCTGATCATGTTGT+TGG	0.520771	1.1:+23180034	MS.gene29240:CDS
AAGGCCTCGATGTTTCTTGG+TGG	0.522913	1.1:+23178390	MS.gene29240:CDS
AGAAGGTTATTATTTCTTGA+GGG	0.523975	1.1:+23179460	MS.gene29240:CDS
AATTAATCAGATTTGCGGCT+AGG	0.524661	1.1:-23178973	None:intergenic
CTACTTCTAGGATTTGGTGT+GGG	0.532326	1.1:+23178483	MS.gene29240:CDS
GCTGCATTTGCATGGTCTTG+GGG	0.533063	1.1:+23179737	MS.gene29240:CDS
AGCAATGAAAACGGTCATGA+TGG	0.533611	1.1:-23179933	None:intergenic
GTTCCTGATCATGTTGTTGG+TGG	0.537519	1.1:+23180037	MS.gene29240:CDS
ATTAGAGGAGCACTTAACAT+TGG	0.539318	1.1:+23178923	MS.gene29240:CDS
CACTAATAACCGCAGACATG+AGG	0.542056	1.1:-23179381	None:intergenic
CATATGTTGCTGCATTTGCA+TGG	0.542826	1.1:+23179729	MS.gene29240:CDS
TCCCATCATTCTTGTGATTG+TGG	0.543740	1.1:-23178364	None:intergenic
CTAGTAAGGTGGAACATCCA+TGG	0.545991	1.1:+23179215	MS.gene29240:CDS
AAACATGATAACATTAATGC+CGG	0.548089	1.1:-23179311	None:intergenic
CCGGTAAGTTGTTGGAAGAA+CGG	0.553582	1.1:-23179292	None:intergenic
TAAGAGCACAGCAATGAAAA+CGG	0.561961	1.1:-23179942	None:intergenic
TCTAAAGCGCAAATTTCACT+TGG	0.574553	1.1:-23179779	None:intergenic
AGGTTATTATTTCTTGAGGG+TGG	0.575907	1.1:+23179463	MS.gene29240:CDS
CACAAGAATGATGGGACGCA+AGG	0.577104	1.1:+23178371	MS.gene29240:CDS
TCCACAATCACAAGAATGAT+GGG	0.581040	1.1:+23178363	MS.gene29240:CDS
ATGTCTGCGGTTATTAGTGG+TGG	0.592724	1.1:+23179385	MS.gene29240:CDS
TATGATCTTGGTATTACTGG+AGG	0.595118	1.1:+23178174	MS.gene29240:CDS
ACTAATAACCGCAGACATGA+GGG	0.599477	1.1:-23179380	None:intergenic
AAACTTCAAGTGACAAAGCA+TGG	0.605901	1.1:-23179879	None:intergenic
TCTACTTCTAGGATTTGGTG+TGG	0.607831	1.1:+23178482	MS.gene29240:CDS
ATAGAGTCTGGAAGTCACAT+TGG	0.624479	1.1:+23179999	MS.gene29240:CDS
GCCATTTCAGATAAATACAC+TGG	0.625829	1.1:-23178890	None:intergenic
CTTGGCACCAACCAACCCAA+TGG	0.625880	1.1:-23179761	None:intergenic
AGGTCAAGCTATAAATGTTG+CGG	0.633836	1.1:+23179814	MS.gene29240:CDS
TGATGCTTCCCTCATGTCTG+CGG	0.661280	1.1:+23179372	MS.gene29240:CDS
AGGAAGCTATCAATGCAGCA+AGG	0.676637	1.1:-23178332	None:intergenic
AAACTGACGAAAGTGAGTTG+AGG	0.682636	1.1:-23179265	None:intergenic
GGACAAGGATCATTTACCAA+AGG	0.690139	1.1:+23179674	MS.gene29240:CDS
TAGTGAAGAAGCTAGTAAGG+TGG	0.692736	1.1:+23179204	MS.gene29240:CDS
GCAATGTTGAAAAGGATCCG+CGG	0.695814	1.1:+23179139	MS.gene29240:CDS
TAAGCCACCAAGAAACATCG+AGG	0.754385	1.1:-23178394	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAATATAGATATTTTTTAC+CGG	+	chr1.1:23178736-23178755	MS.gene29240:intron	10.0%
!!!	ATAATTAATCTATGATTTGT+AGG	+	chr1.1:23179610-23179629	MS.gene29240:intron	15.0%
!!!	TGTATTTTAAATAATGTATG+TGG	+	chr1.1:23178593-23178612	MS.gene29240:intron	15.0%
!!	AGTGGAATAAAAAATTATGA+GGG	+	chr1.1:23178087-23178106	MS.gene29240:CDS	20.0%
!!!	ATATTCTTCATCAACATTTT+CGG	-	chr1.1:23179167-23179186	None:intergenic	20.0%
!!!	TATGATTTGTAGGTTATTAT+TGG	+	chr1.1:23179620-23179639	MS.gene29240:intron	20.0%
!	AAACATGATAACATTAATGC+CGG	-	chr1.1:23179314-23179333	None:intergenic	25.0%
!	AAACATGTCATTAACACATA+TGG	-	chr1.1:23178123-23178142	None:intergenic	25.0%
!	AACGTTGAAATGCTAATAAT+TGG	+	chr1.1:23178456-23178475	MS.gene29240:CDS	25.0%
!	AATGTATGTGGTCTTTATTA+TGG	+	chr1.1:23178605-23178624	MS.gene29240:intron	25.0%
!	ACCATAATTAATCAGATTTG+CGG	-	chr1.1:23178981-23179000	None:intergenic	25.0%
!	ACTCTATTCATTTCTTCAAT+TGG	-	chr1.1:23179986-23180005	None:intergenic	25.0%
!	CATTCATTAAATGATGTATG+TGG	-	chr1.1:23178632-23178651	None:intergenic	25.0%
!	CTCTATTCATTTCTTCAATT+GGG	-	chr1.1:23179985-23180004	None:intergenic	25.0%
!	GAGTGGAATAAAAAATTATG+AGG	+	chr1.1:23178086-23178105	MS.gene29240:CDS	25.0%
!	TACCAATTGTAATCATCATT+TGG	-	chr1.1:23178952-23178971	None:intergenic	25.0%
!	TTCCAAATGATGATTACAAT+TGG	+	chr1.1:23178947-23178966	MS.gene29240:CDS	25.0%
!!	AAGAAGGTTATTATTTCTTG+AGG	+	chr1.1:23179459-23179478	MS.gene29240:CDS	25.0%
!!	AGAAGGTTATTATTTCTTGA+GGG	+	chr1.1:23179460-23179479	MS.gene29240:CDS	25.0%
!!	GTTTTGCTTATAATAGTTAC+CGG	-	chr1.1:23178571-23178590	None:intergenic	25.0%
!!!	GCGTAAAACTTTTTATTTTG+CGG	-	chr1.1:23178765-23178784	None:intergenic	25.0%
	AACCAGCAAAGAAAAAGAAA+AGG	-	chr1.1:23179907-23179926	None:intergenic	30.0%
	AAGTTATAATATACACCCTC+CGG	+	chr1.1:23178549-23178568	MS.gene29240:intron	30.0%
	ACATTACTCAACCAGAATAT+AGG	+	chr1.1:23179242-23179261	MS.gene29240:CDS	30.0%
	ACCAGTGTATTTATCTGAAA+TGG	+	chr1.1:23178889-23178908	MS.gene29240:CDS	30.0%
	ATCCAAACTTTGATGCAATT+AGG	-	chr1.1:23179649-23179668	None:intergenic	30.0%
	ATCCTAATTGCATCAAAGTT+TGG	+	chr1.1:23179644-23179663	MS.gene29240:CDS	30.0%
	CAAAGCCTAAGATCTTAAAA+AGG	-	chr1.1:23179348-23179367	None:intergenic	30.0%
	CACAGATAAAAAACAAGAGA+AGG	-	chr1.1:23179709-23179728	None:intergenic	30.0%
	CATTTAGTATTGCACCAATA+AGG	-	chr1.1:23178425-23178444	None:intergenic	30.0%
	CTCACAAATGTTTATTTGTC+AGG	+	chr1.1:23179486-23179505	MS.gene29240:CDS	30.0%
	CTTATTGGTGCAATACTAAA+TGG	+	chr1.1:23178423-23178442	MS.gene29240:CDS	30.0%
	GATAAAAAACAAGAGAAGGT+CGG	-	chr1.1:23179705-23179724	None:intergenic	30.0%
	GTTATGCTTATAATAGTGAC+CGG	+	chr1.1:23178667-23178686	MS.gene29240:intron	30.0%
	TCTTGATCAAATTCTTTCCT+CGG	+	chr1.1:23178217-23178236	MS.gene29240:CDS	30.0%
	TTGAAGAAATGAATAGAGTC+TGG	+	chr1.1:23179987-23180006	MS.gene29240:CDS	30.0%
	TTGTCTATTGTCTAAACAGT+CGG	+	chr1.1:23178865-23178884	MS.gene29240:intron	30.0%
!	TTCTTCAATTGGGACATTTT+TGG	-	chr1.1:23179975-23179994	None:intergenic	30.0%
!!!	CTTCTTTTTGGTTATGATCT+TGG	+	chr1.1:23178162-23178181	MS.gene29240:CDS	30.0%
!!!	CTTTTTAAGATCTTAGGCTT+TGG	+	chr1.1:23179346-23179365	MS.gene29240:CDS	30.0%
	AAACTTCAAGTGACAAAGCA+TGG	-	chr1.1:23179882-23179901	None:intergenic	35.0%
	AAGCAAAGGCAATGTTGAAA+AGG	+	chr1.1:23179131-23179150	MS.gene29240:CDS	35.0%
	AAGTGAAATTTGCGCTTTAG+AGG	+	chr1.1:23179781-23179800	MS.gene29240:CDS	35.0%
	AATTAATCAGATTTGCGGCT+AGG	-	chr1.1:23178976-23178995	None:intergenic	35.0%
	AGGTCAAGCTATAAATGTTG+CGG	+	chr1.1:23179814-23179833	MS.gene29240:CDS	35.0%
	ATAATTGGTCGTCTACTTCT+AGG	+	chr1.1:23178471-23178490	MS.gene29240:CDS	35.0%
	CAGTAGACAAATTTGGAAGA+AGG	+	chr1.1:23179443-23179462	MS.gene29240:CDS	35.0%
	CCTAAGATCTTAAAAAGGAC+GGG	-	chr1.1:23179343-23179362	None:intergenic	35.0%
	CCTCTTTCAATCAAGGAATT+GGG	-	chr1.1:23179100-23179119	None:intergenic	35.0%
	CTTCCAAGCATAAAAATGGA+TGG	+	chr1.1:23179002-23179021	MS.gene29240:CDS	35.0%
	CTTGATCAAATTCTTTCCTC+GGG	+	chr1.1:23178218-23178237	MS.gene29240:CDS	35.0%
	GCCATTTCAGATAAATACAC+TGG	-	chr1.1:23178893-23178912	None:intergenic	35.0%
	GCCGCAAATCTGATTAATTA+TGG	+	chr1.1:23178977-23178996	MS.gene29240:CDS	35.0%
	GCCTAAGATCTTAAAAAGGA+CGG	-	chr1.1:23179344-23179363	None:intergenic	35.0%
	GGGTGTTTCACCTAAAAAAA+GGG	-	chr1.1:23179080-23179099	None:intergenic	35.0%
	GGTACTTCCAAGCATAAAAA+TGG	+	chr1.1:23178998-23179017	MS.gene29240:CDS	35.0%
	GGTTATGATCTTGGTATTAC+TGG	+	chr1.1:23178171-23178190	MS.gene29240:CDS	35.0%
	GTCTTCACAGTAGACAAATT+TGG	+	chr1.1:23179436-23179455	MS.gene29240:CDS	35.0%
	TATCAATGCAGCAAGGTATA+GGG	-	chr1.1:23178328-23178347	None:intergenic	35.0%
	TATGATCTTGGTATTACTGG+AGG	+	chr1.1:23178174-23178193	MS.gene29240:CDS	35.0%
	TATGTTCCTGATCATGTTGT+TGG	+	chr1.1:23180034-23180053	MS.gene29240:CDS	35.0%
	TCCACAATCACAAGAATGAT+GGG	+	chr1.1:23178363-23178382	MS.gene29240:CDS	35.0%
	TGCTTATAATAGTTACCGGA+GGG	-	chr1.1:23178567-23178586	None:intergenic	35.0%
	TGGGTGTTTCACCTAAAAAA+AGG	-	chr1.1:23179081-23179100	None:intergenic	35.0%
	TTCCACAATCACAAGAATGA+TGG	+	chr1.1:23178362-23178381	MS.gene29240:CDS	35.0%
	TTGCTTATAATAGTTACCGG+AGG	-	chr1.1:23178568-23178587	None:intergenic	35.0%
	TTTGGTAAATGATCCTTGTC+CGG	-	chr1.1:23179675-23179694	None:intergenic	35.0%
!	AGGTTATTATTTCTTGAGGG+TGG	+	chr1.1:23179463-23179482	MS.gene29240:CDS	35.0%
!	ATGCTTTGTCACTTGAAGTT+TGG	+	chr1.1:23179881-23179900	MS.gene29240:CDS	35.0%
!	TAAGAGCACAGCAATGAAAA+CGG	-	chr1.1:23179945-23179964	None:intergenic	35.0%
!	TCTAAAGCGCAAATTTCACT+TGG	-	chr1.1:23179782-23179801	None:intergenic	35.0%
!	TTCATTCTTTTATACACCCG+AGG	-	chr1.1:23178237-23178256	None:intergenic	35.0%
!!	ATTAGAGGAGCACTTAACAT+TGG	+	chr1.1:23178923-23178942	MS.gene29240:CDS	35.0%
!!	GGTGGCTTATTTTTCCTTAT+TGG	+	chr1.1:23178408-23178427	MS.gene29240:CDS	35.0%
!!	TCTCCATCCATTTTTATGCT+TGG	-	chr1.1:23179008-23179027	None:intergenic	35.0%
!!	TGGTGGTGGTAATAACAAAA+AGG	+	chr1.1:23180054-23180073	MS.gene29240:CDS	35.0%
!!!	AATTGGGACATTTTTGGTCT+CGG	-	chr1.1:23179969-23179988	None:intergenic	35.0%
!!!	ACATTGCCTTTGCTTTTTCA+TGG	-	chr1.1:23179126-23179145	None:intergenic	35.0%
!!!	ACTTTTTATTTTGCGGAAGC+CGG	-	chr1.1:23178758-23178777	None:intergenic	35.0%
!!!	CTTTTTCTTTGCTGGTTTTG+TGG	+	chr1.1:23179910-23179929	MS.gene29240:CDS	35.0%
!!!	TGTCTAGGATCCCTTTTTTT+AGG	+	chr1.1:23179067-23179086	MS.gene29240:CDS	35.0%
	AAACTGACGAAAGTGAGTTG+AGG	-	chr1.1:23179268-23179287	None:intergenic	40.0%
	AAATGGATGGAGAGTCTCTT+TGG	+	chr1.1:23179015-23179034	MS.gene29240:CDS	40.0%
	AATGGATGGAGAGTCTCTTT+GGG	+	chr1.1:23179016-23179035	MS.gene29240:CDS	40.0%
	ACAAACGAGGACACACATAT+AGG	-	chr1.1:23179567-23179586	None:intergenic	40.0%
	ACATTTATAGCTTGACCTGC+TGG	-	chr1.1:23179812-23179831	None:intergenic	40.0%
	ACTAATAACCGCAGACATGA+GGG	-	chr1.1:23179383-23179402	None:intergenic	40.0%
	AGCAATGAAAACGGTCATGA+TGG	-	chr1.1:23179936-23179955	None:intergenic	40.0%
	AGGCAACCATGAAAAAGCAA+AGG	+	chr1.1:23179117-23179136	MS.gene29240:CDS	40.0%
	ATAGAGTCTGGAAGTCACAT+TGG	+	chr1.1:23179999-23180018	MS.gene29240:CDS	40.0%
	ATGCTTATAATAGTGACCGG+AGG	+	chr1.1:23178670-23178689	MS.gene29240:intron	40.0%
	ATGGCTCCAGCAAAAATTAG+AGG	+	chr1.1:23178908-23178927	MS.gene29240:CDS	40.0%
	ATGGTTGCCTCTTTCAATCA+AGG	-	chr1.1:23179107-23179126	None:intergenic	40.0%
	CATATGTTGCTGCATTTGCA+TGG	+	chr1.1:23179729-23179748	MS.gene29240:CDS	40.0%
	CATTAATGCCGGTAAGTTGT+TGG	-	chr1.1:23179303-23179322	None:intergenic	40.0%
	CCCAATTCCTTGATTGAAAG+AGG	+	chr1.1:23179097-23179116	MS.gene29240:CDS	40.0%
	CCTAGACACAAAAGAATTGC+TGG	-	chr1.1:23179055-23179074	None:intergenic	40.0%
	CTATCAATGCAGCAAGGTAT+AGG	-	chr1.1:23178329-23178348	None:intergenic	40.0%
	GCATCAAAGTTTGGATTGAC+CGG	+	chr1.1:23179653-23179672	MS.gene29240:CDS	40.0%
	GCCTCTTTCAATCAAGGAAT+TGG	-	chr1.1:23179101-23179120	None:intergenic	40.0%
	GGACAAGGATCATTTACCAA+AGG	+	chr1.1:23179674-23179693	MS.gene29240:CDS	40.0%
	GGTTGAGTAATGTTCTTCCA+TGG	-	chr1.1:23179235-23179254	None:intergenic	40.0%
	TAGTGAAGAAGCTAGTAAGG+TGG	+	chr1.1:23179204-23179223	MS.gene29240:CDS	40.0%
	TATGTGTGTCCTCGTTTGTA+TGG	+	chr1.1:23179568-23179587	MS.gene29240:intron	40.0%
	TCAAGTGACAAAGCATGGTT+AGG	-	chr1.1:23179877-23179896	None:intergenic	40.0%
	TCCCATCATTCTTGTGATTG+TGG	-	chr1.1:23178367-23178386	None:intergenic	40.0%
	TGAACAGTTCCATACAAACG+AGG	-	chr1.1:23179580-23179599	None:intergenic	40.0%
	TGCTAGTGAAGAAGCTAGTA+AGG	+	chr1.1:23179201-23179220	MS.gene29240:CDS	40.0%
	TGCTTATAATAGTGACCGGA+GGG	+	chr1.1:23178671-23178690	MS.gene29240:intron	40.0%
	TGTGATTGTGGAAGCAAAGA+AGG	-	chr1.1:23178355-23178374	None:intergenic	40.0%
!	ACATGTTTTGTAGCTGCCAT+GGG	+	chr1.1:23178135-23178154	MS.gene29240:CDS	40.0%
!	AGTGCTCCTCTAATTTTTGC+TGG	-	chr1.1:23178917-23178936	None:intergenic	40.0%
!	CCAGCAATTCTTTTGTGTCT+AGG	+	chr1.1:23179052-23179071	MS.gene29240:CDS	40.0%
!	GGCCTTTTCTTTTTCTTTGC+TGG	+	chr1.1:23179902-23179921	MS.gene29240:CDS	40.0%
!	GTGTTGAATTTTACACCCTC+CGG	-	chr1.1:23178689-23178708	None:intergenic	40.0%
!!	CTACTTCTAGGATTTGGTGT+GGG	+	chr1.1:23178483-23178502	MS.gene29240:CDS	40.0%
!!	TCTACTTCTAGGATTTGGTG+TGG	+	chr1.1:23178482-23178501	MS.gene29240:CDS	40.0%
!!!	ATTGGGACATTTTTGGTCTC+GGG	-	chr1.1:23179968-23179987	None:intergenic	40.0%
!!!	CCCGTCCTTTTTAAGATCTT+AGG	+	chr1.1:23179340-23179359	MS.gene29240:CDS	40.0%
!!!	TCTGGAAGTCACATTGGTTT+TGG	+	chr1.1:23180005-23180024	MS.gene29240:CDS	40.0%
	AAGTTTGGATTGACCGGACA+AGG	+	chr1.1:23179659-23179678	MS.gene29240:CDS	45.0%
	ACCAAAAAGAAGACCTCCCA+TGG	-	chr1.1:23178154-23178173	None:intergenic	45.0%
	AGGAAGCTATCAATGCAGCA+AGG	-	chr1.1:23178335-23178354	None:intergenic	45.0%
	ATGTCTGCGGTTATTAGTGG+TGG	+	chr1.1:23179385-23179404	MS.gene29240:CDS	45.0%
	CACTAATAACCGCAGACATG+AGG	-	chr1.1:23179384-23179403	None:intergenic	45.0%
	CCGGTAAGTTGTTGGAAGAA+CGG	-	chr1.1:23179295-23179314	None:intergenic	45.0%
	CCGTTCTTCCAACAACTTAC+CGG	+	chr1.1:23179292-23179311	MS.gene29240:CDS	45.0%
	CTAGTAAGGTGGAACATCCA+TGG	+	chr1.1:23179215-23179234	MS.gene29240:CDS	45.0%
	CTCATGTCTGCGGTTATTAG+TGG	+	chr1.1:23179382-23179401	MS.gene29240:CDS	45.0%
	GCAATGTTGAAAAGGATCCG+CGG	+	chr1.1:23179139-23179158	MS.gene29240:CDS	45.0%
	GTTCCTGATCATGTTGTTGG+TGG	+	chr1.1:23180037-23180056	MS.gene29240:CDS	45.0%
	TAAGCCACCAAGAAACATCG+AGG	-	chr1.1:23178397-23178416	None:intergenic	45.0%
	TACTGGAGGAGTGACTTCTA+TGG	+	chr1.1:23178188-23178207	MS.gene29240:CDS	45.0%
	TGCTGCATTTGCATGGTCTT+GGG	+	chr1.1:23179736-23179755	MS.gene29240:CDS	45.0%
	TTGCTGCATTTGCATGGTCT+TGG	+	chr1.1:23179735-23179754	MS.gene29240:CDS	45.0%
!	CATCAACATTTTCGGTTCCG+CGG	-	chr1.1:23179159-23179178	None:intergenic	45.0%
!	GACATGTTTTGTAGCTGCCA+TGG	+	chr1.1:23178134-23178153	MS.gene29240:CDS	45.0%
!	GTGAGTTGAGGCCTATATTC+TGG	-	chr1.1:23179256-23179275	None:intergenic	45.0%
!	TGGTGTGGGATTTTGCAATC+AGG	+	chr1.1:23178497-23178516	MS.gene29240:CDS	45.0%
!!	GGTCGTCTACTTCTAGGATT+TGG	+	chr1.1:23178477-23178496	MS.gene29240:CDS	45.0%
!!	TTAGTTAATTATAAATTATT+TGG	-	chr1.1:23178833-23178852	None:intergenic	5.0%
!!!	AATTAAATTTCTTAATATTT+TGG	+	chr1.1:23178804-23178823	MS.gene29240:intron	5.0%
	AAGGCCTCGATGTTTCTTGG+TGG	+	chr1.1:23178390-23178409	MS.gene29240:CDS	50.0%
	CCACCACCAACAACATGATC+AGG	-	chr1.1:23180043-23180062	None:intergenic	50.0%
	TGATGCTTCCCTCATGTCTG+CGG	+	chr1.1:23179372-23179391	MS.gene29240:CDS	50.0%
	TGGAGAGTCTCTTTGGGTCT+TGG	+	chr1.1:23179022-23179041	MS.gene29240:CDS	50.0%
!	CACAAGAATGATGGGACGCA+AGG	+	chr1.1:23178371-23178390	MS.gene29240:CDS	50.0%
!	CCTGATCATGTTGTTGGTGG+TGG	+	chr1.1:23180040-23180059	MS.gene29240:CDS	50.0%
!	GCCATGGGAGGTCTTCTTTT+TGG	+	chr1.1:23178150-23178169	MS.gene29240:CDS	50.0%
!	GCTGCATTTGCATGGTCTTG+GGG	+	chr1.1:23179737-23179756	MS.gene29240:CDS	50.0%
!	GGAGCTTTTGTTGAGACGAG+TGG	+	chr1.1:23178069-23178088	MS.gene29240:CDS	50.0%
!	TGTTTTGTAGCTGCCATGGG+AGG	+	chr1.1:23178138-23178157	MS.gene29240:CDS	50.0%
	CGCAAGGCCTCGATGTTTCT+TGG	+	chr1.1:23178387-23178406	MS.gene29240:CDS	55.0%
	CTTGGCACCAACCAACCCAA+TGG	-	chr1.1:23179764-23179783	None:intergenic	55.0%
!	GAGAAGGTCGGCTTCACCTT+TGG	-	chr1.1:23179693-23179712	None:intergenic	55.0%
!	GCATGGTCTTGGGGACCATT+GGG	+	chr1.1:23179746-23179765	MS.gene29240:CDS	55.0%
!	TGCATGGTCTTGGGGACCAT+TGG	+	chr1.1:23179745-23179764	MS.gene29240:CDS	55.0%
!!	GCTTTAGAGGTTCGACCAGC+AGG	+	chr1.1:23179794-23179813	MS.gene29240:CDS	55.0%
!!	TTGGGGACCATTGGGTTGGT+TGG	+	chr1.1:23179754-23179773	MS.gene29240:CDS	55.0%
	GGTCTTGGGGACCATTGGGT+TGG	+	chr1.1:23179750-23179769	MS.gene29240:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	23178060	23180087	23178060	ID=MS.gene29240
chr1.1	mRNA	23178060	23180087	23178060	ID=MS.gene29240.t1;Parent=MS.gene29240
chr1.1	exon	23178060	23178518	23178060	ID=MS.gene29240.t1.exon1;Parent=MS.gene29240.t1
chr1.1	CDS	23178060	23178518	23178060	ID=cds.MS.gene29240.t1;Parent=MS.gene29240.t1
chr1.1	exon	23178884	23179507	23178884	ID=MS.gene29240.t1.exon2;Parent=MS.gene29240.t1
chr1.1	CDS	23178884	23179507	23178884	ID=cds.MS.gene29240.t1;Parent=MS.gene29240.t1
chr1.1	exon	23179632	23180087	23179632	ID=MS.gene29240.t1.exon3;Parent=MS.gene29240.t1
chr1.1	CDS	23179632	23180087	23179632	ID=cds.MS.gene29240.t1;Parent=MS.gene29240.t1

Gene Sequence

>MS.gene29240

ATGGGAGCTGGAGCTTTTGTTGAGACGAGTGGAATAAAAAATTATGAGGGAAGAGTGACTCCATATGTGTTAATGACATGTTTTGTAGCTGCCATGGGAGGTCTTCTTTTTGGTTATGATCTTGGTATTACTGGAGGAGTGACTTCTATGGATGAATTCTTGATCAAATTCTTTCCTCGGGTGTATAAAAGAATGAAAGATGAAACACATAATACAAGTCAATATTGTAAATTTGATGATCAAATTTTAACACTATTCACATCTTCCCTATACCTTGCTGCATTGATAGCTTCCTTCTTTGCTTCCACAATCACAAGAATGATGGGACGCAAGGCCTCGATGTTTCTTGGTGGCTTATTTTTCCTTATTGGTGCAATACTAAATGGATTAGCAGCTAACGTTGAAATGCTAATAATTGGTCGTCTACTTCTAGGATTTGGTGTGGGATTTTGCAATCAGGTAAGAACGTTAAAACTCACAAAAATTTAGAAGTTATAATATACACCCTCCGGTAACTATTATAAGCAAAACTTTGTATTTTAAATAATGTATGTGGTCTTTATTATGGACCACATACATCATTTAATGAATGAATCTAAAATACAAAGTTATGCTTATAATAGTGACCGGAGGGTGTAAAATTCAACACTAGTTTTGTGTAAAGTGTTAGAGACGTTAAATATAGATATTTTTTACCGGCTTCCGCAAAATAAAAAGTTTTACGCGTGTAAGTTTTATCTATTTAATTAAATTTCTTAATATTTTGGAAACCAAATAATTTATAATTAACTAATTTTAGACTTTGTTGTCTATTGTCTAAACAGTCGGTACCAGTGTATTTATCTGAAATGGCTCCAGCAAAAATTAGAGGAGCACTTAACATTGGCTTCCAAATGATGATTACAATTGGTATCCTAGCCGCAAATCTGATTAATTATGGTACTTCCAAGCATAAAAATGGATGGAGAGTCTCTTTGGGTCTTGGAGCAGTGCCAGCAATTCTTTTGTGTCTAGGATCCCTTTTTTTAGGTGAAACACCCAATTCCTTGATTGAAAGAGGCAACCATGAAAAAGCAAAGGCAATGTTGAAAAGGATCCGCGGAACCGAAAATGTTGATGAAGAATATCAAGATCTTGTTGATGCTAGTGAAGAAGCTAGTAAGGTGGAACATCCATGGAAGAACATTACTCAACCAGAATATAGGCCTCAACTCACTTTCGTCAGTTTTATTCCGTTCTTCCAACAACTTACCGGCATTAATGTTATCATGTTTTACGCTCCCGTCCTTTTTAAGATCTTAGGCTTTGGTGATGATGCTTCCCTCATGTCTGCGGTTATTAGTGGTGGCGTCAATGTTGTTGCTACACTTGTTTCTGTCTTCACAGTAGACAAATTTGGAAGAAGGTTATTATTTCTTGAGGGTGGCTCACAAATGTTTATTTGTCAGGTAAAAATTGACACATTTATTTCTTTTAGATTTTCATACATAACGCTCAAGTTAAACCTATATGTGTGTCCTCGTTTGTATGGAACTGTTCATGTACAGACTATAATTAATCTATGATTTGTAGGTTATTATTGGAATCCTAATTGCATCAAAGTTTGGATTGACCGGACAAGGATCATTTACCAAAGGTGAAGCCGACCTTCTCTTGTTTTTTATCTGTGCATATGTTGCTGCATTTGCATGGTCTTGGGGACCATTGGGTTGGTTGGTGCCAAGTGAAATTTGCGCTTTAGAGGTTCGACCAGCAGGTCAAGCTATAAATGTTGCGGTGAACATGTTCTTCACATTTATGATTGCTCAAGTCTTCCTAACCATGCTTTGTCACTTGAAGTTTGGCCTTTTCTTTTTCTTTGCTGGTTTTGTGGCCATCATGACCGTTTTCATTGCTGTGCTCTTACCCGAGACCAAAAATGTCCCAATTGAAGAAATGAATAGAGTCTGGAAGTCACATTGGTTTTGGACAAAGTATGTTCCTGATCATGTTGTTGGTGGTGGTAATAACAAAAAGGTTGATCCTTGA

Protein sequence

>MS.gene29240.t1

MGAGAFVETSGIKNYEGRVTPYVLMTCFVAAMGGLLFGYDLGITGGVTSMDEFLIKFFPRVYKRMKDETHNTSQYCKFDDQILTLFTSSLYLAALIASFFASTITRMMGRKASMFLGGLFFLIGAILNGLAANVEMLIIGRLLLGFGVGFCNQSVPVYLSEMAPAKIRGALNIGFQMMITIGILAANLINYGTSKHKNGWRVSLGLGAVPAILLCLGSLFLGETPNSLIERGNHEKAKAMLKRIRGTENVDEEYQDLVDASEEASKVEHPWKNITQPEYRPQLTFVSFIPFFQQLTGINVIMFYAPVLFKILGFGDDASLMSAVISGGVNVVATLVSVFTVDKFGRRLLFLEGGSQMFICQVIIGILIASKFGLTGQGSFTKGEADLLLFFICAYVAAFAWSWGPLGWLVPSEICALEVRPAGQAINVAVNMFFTFMIAQVFLTMLCHLKFGLFFFFAGFVAIMTVFIAVLLPETKNVPIEEMNRVWKSHWFWTKYVPDHVVGGGNNKKVDP