AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76380.t1 MTR_8g077890 98.603 501 7 0 1 501 1 501 0.0 999
MS.gene76380.t1 MTR_5g075300 83.200 500 83 1 1 499 1 500 0.0 865
MS.gene76380.t1 MTR_4g069500 60.494 486 188 3 16 499 27 510 0.0 596
MS.gene76380.t1 MTR_3g116240 60.625 480 184 4 7 484 17 493 0.0 583
MS.gene76380.t1 MTR_4g072030 59.743 467 185 2 16 482 24 487 0.0 570
MS.gene76380.t1 MTR_4g069500 59.740 462 182 3 40 499 1 460 0.0 559
MS.gene76380.t1 MTR_5g019870 55.925 481 209 2 11 489 7 486 0.0 537
MS.gene76380.t1 MTR_6g088450 52.677 467 210 2 8 474 47 502 2.64e-169 488
MS.gene76380.t1 MTR_8g103500 51.346 483 225 4 2 484 1 473 1.98e-162 470
MS.gene76380.t1 MTR_2g013310 48.148 486 236 5 16 501 50 519 1.42e-154 451
MS.gene76380.t1 MTR_7g446340 44.910 501 258 6 2 501 38 521 6.17e-152 444
MS.gene76380.t1 MTR_6g007340 44.910 501 258 6 2 501 38 521 6.17e-152 444
MS.gene76380.t1 MTR_2g013310 47.835 462 225 6 40 501 1 446 4.27e-144 421
MS.gene76380.t1 MTR_4g069500 56.832 322 136 2 180 499 1 321 1.72e-129 380
MS.gene76380.t1 MTR_3g084110 33.196 485 288 9 16 490 25 483 1.30e-74 244
MS.gene76380.t1 MTR_1g116650 32.720 489 287 7 9 490 67 520 4.06e-73 241
MS.gene76380.t1 MTR_1g116660 34.016 488 293 8 16 496 32 497 1.50e-72 239
MS.gene76380.t1 MTR_7g005910 32.106 489 305 8 8 490 20 487 2.77e-71 235
MS.gene76380.t1 MTR_4g077740 29.448 489 316 7 5 479 24 497 3.66e-62 211
MS.gene76380.t1 MTR_3g074410 30.891 505 291 11 12 485 15 492 2.42e-61 209
MS.gene76380.t1 MTR_6g018790 32.051 468 280 9 25 486 111 546 5.60e-58 201
MS.gene76380.t1 MTR_0009s0370 33.710 442 263 9 65 499 88 506 1.88e-57 199
MS.gene76380.t1 MTR_5g077580 28.571 560 283 11 16 486 23 554 4.41e-57 199
MS.gene76380.t1 MTR_7g082270 31.702 470 279 10 25 486 71 506 6.04e-56 195
MS.gene76380.t1 MTR_5g041550 29.862 509 308 12 3 485 8 493 1.57e-54 191
MS.gene76380.t1 MTR_3g023480 31.678 423 264 7 67 485 90 491 3.44e-54 190
MS.gene76380.t1 MTR_5g020270 29.247 465 296 8 22 482 53 488 7.10e-54 189
MS.gene76380.t1 MTR_3g093010 28.820 517 322 11 5 496 8 503 5.42e-53 187
MS.gene76380.t1 MTR_1g022315 27.623 467 304 8 21 482 51 488 9.26e-53 186
MS.gene76380.t1 MTR_8g077310 29.247 465 290 10 22 479 50 482 1.79e-52 185
MS.gene76380.t1 MTR_3g008160 29.472 492 300 12 24 491 28 496 2.65e-52 185
MS.gene76380.t1 MTR_5g006070 30.353 425 267 7 59 478 35 435 3.48e-52 184
MS.gene76380.t1 MTR_4g090600 30.171 527 310 14 3 495 8 510 3.54e-52 185
MS.gene76380.t1 MTR_3g008170 29.666 509 313 10 7 489 11 500 3.87e-52 184
MS.gene76380.t1 MTR_3g007910 28.226 496 300 10 5 486 8 461 5.09e-52 184
MS.gene76380.t1 MTR_5g006070 30.353 425 267 7 59 478 83 483 1.05e-51 184
MS.gene76380.t1 MTR_3g008160 30.394 431 273 9 65 491 40 447 1.67e-51 182
MS.gene76380.t1 MTR_3g074390 31.106 434 255 8 65 485 93 495 1.97e-51 182
MS.gene76380.t1 MTR_8g102860 29.058 499 309 12 18 494 26 501 1.46e-50 181
MS.gene76380.t1 MTR_2g049020 35.143 350 207 6 16 361 23 356 2.91e-50 181
MS.gene76380.t1 MTR_2g049020 33.962 106 70 0 381 486 452 557 1.82e-13 73.2
MS.gene76380.t1 MTR_8g102860 30.324 432 277 8 65 494 40 449 4.98e-50 178
MS.gene76380.t1 MTR_3g093060 30.365 438 279 9 65 497 42 458 7.84e-50 177
MS.gene76380.t1 MTR_4g091370 29.800 500 305 10 7 482 12 489 9.76e-50 178
MS.gene76380.t1 MTR_5g020270 30.216 417 258 8 70 482 1 388 2.25e-49 174
MS.gene76380.t1 MTR_7g113960 28.992 476 300 9 30 501 38 479 4.29e-49 176
MS.gene76380.t1 MTR_4g118610 30.752 452 272 13 34 479 67 483 5.99e-49 176
MS.gene76380.t1 MTR_0204s0020 28.600 500 312 12 8 485 9 485 2.22e-48 174
MS.gene76380.t1 MTR_0204s0020 28.773 497 312 12 8 485 9 482 2.45e-48 174
MS.gene76380.t1 MTR_2g048720 36.158 354 203 7 16 365 23 357 2.85e-48 175
MS.gene76380.t1 MTR_1g038630 30.346 491 291 12 18 482 22 487 8.07e-48 173
MS.gene76380.t1 MTR_8g077300 27.119 472 309 9 18 484 38 479 1.13e-47 172
MS.gene76380.t1 MTR_1g104750 29.314 481 291 11 23 478 27 483 1.40e-47 172
MS.gene76380.t1 MTR_3g074270 28.512 484 282 10 24 485 28 469 1.76e-47 171
MS.gene76380.t1 MTR_8g077310 29.736 417 254 10 70 479 1 385 2.06e-47 169
MS.gene76380.t1 MTR_1g038600 30.126 478 291 11 18 482 22 469 2.24e-47 171
MS.gene76380.t1 MTR_1g104780 29.778 450 281 8 59 500 83 505 3.75e-47 171
MS.gene76380.t1 MTR_6g087040 28.671 429 282 7 65 491 92 498 4.29e-47 171
MS.gene76380.t1 MTR_6g088375 28.671 429 282 7 65 491 92 498 4.29e-47 171
MS.gene76380.t1 MTR_0204s0040 27.778 504 318 11 4 485 14 493 9.81e-47 170
MS.gene76380.t1 MTR_7g113970 27.311 476 301 8 15 489 71 502 1.95e-46 169
MS.gene76380.t1 MTR_1g022315 27.751 418 268 8 70 482 1 389 2.07e-46 166
MS.gene76380.t1 MTR_3g080240 28.602 472 304 9 19 486 93 535 2.65e-46 169
MS.gene76380.t1 MTR_7g094450 29.167 480 304 11 3 479 24 470 3.40e-46 167
MS.gene76380.t1 MTR_1g104770 30.698 430 268 9 55 478 79 484 4.29e-46 168
MS.gene76380.t1 MTR_2g020710 30.248 443 260 12 47 479 77 480 9.96e-46 167
MS.gene76380.t1 MTR_4g116770 27.778 504 318 11 4 485 210 689 1.64e-45 169
MS.gene76380.t1 MTR_5g020270 27.527 465 283 9 22 482 53 467 3.22e-45 165
MS.gene76380.t1 MTR_7g082270 31.785 409 237 10 25 425 71 445 6.03e-45 164
MS.gene76380.t1 MTR_2g020710 30.516 426 247 12 64 479 5 391 9.75e-44 159
MS.gene76380.t1 MTR_2g026160 31.467 375 231 8 7 370 10 369 1.51e-43 162
MS.gene76380.t1 MTR_2g026160 38.095 105 65 0 380 484 454 558 7.08e-16 80.9
MS.gene76380.t1 MTR_4g116790 27.273 506 322 11 2 485 10 491 5.17e-43 160
MS.gene76380.t1 MTR_7g094110 29.668 482 299 13 6 479 23 472 9.23e-43 158
MS.gene76380.t1 MTR_5g094760 28.221 489 307 11 18 485 26 491 6.71e-42 156
MS.gene76380.t1 MTR_7g091690 27.789 511 325 11 2 491 10 497 9.72e-42 156
MS.gene76380.t1 MTR_5g082540 27.600 500 293 15 18 482 22 487 1.23e-41 156
MS.gene76380.t1 MTR_6g087910 28.571 490 302 14 1 480 33 484 1.71e-39 149
MS.gene76380.t1 MTR_4g013205 28.747 487 301 13 7 480 17 470 4.65e-39 148
MS.gene76380.t1 MTR_3g074370 31.548 336 186 10 177 496 30 337 9.34e-36 136
MS.gene76380.t1 MTR_4g064820 29.620 368 239 8 7 361 80 440 1.07e-35 139
MS.gene76380.t1 MTR_8g077310 28.075 374 238 6 22 393 50 394 1.44e-35 137
MS.gene76380.t1 MTR_3g074340 31.988 322 178 9 177 485 30 323 1.83e-35 135
MS.gene76380.t1 MTR_3g074320 31.677 322 179 9 177 485 30 323 5.60e-35 134
MS.gene76380.t1 MTR_2g026140 28.804 368 227 9 7 366 10 350 1.52e-34 137
MS.gene76380.t1 MTR_2g026140 36.190 105 67 0 380 484 439 543 8.07e-12 68.2
MS.gene76380.t1 MTR_4g118610 29.231 390 236 12 25 408 58 413 9.44e-34 132
MS.gene76380.t1 MTR_7g094110 27.917 480 290 12 6 479 23 452 1.36e-33 132
MS.gene76380.t1 MTR_3g074380 28.852 357 213 8 24 361 31 365 2.06e-33 130
MS.gene76380.t1 MTR_2g020710 29.032 372 216 11 47 408 77 410 1.02e-32 129
MS.gene76380.t1 MTR_2g020710 29.111 371 215 11 47 407 77 409 1.58e-32 129
MS.gene76380.t1 MTR_3g116060 35.294 204 129 2 17 219 2 203 6.24e-32 130
MS.gene76380.t1 MTR_3g116060 30.315 254 149 8 254 490 487 729 3.43e-21 97.8
MS.gene76380.t1 MTR_7g113960 28.402 338 206 7 34 369 46 349 2.75e-29 119
MS.gene76380.t1 MTR_7g113970 25.843 356 221 6 15 369 71 384 2.64e-27 114
MS.gene76380.t1 MTR_3g074400 27.335 439 235 12 65 476 39 420 1.02e-26 112
MS.gene76380.t1 MTR_5g044910 28.390 236 163 4 23 254 8 241 4.71e-26 112
MS.gene76380.t1 MTR_5g044910 30.303 231 127 5 264 476 487 701 1.13e-17 86.7
MS.gene76380.t1 MTR_2g020710 28.571 329 188 10 47 365 77 368 4.94e-26 109
MS.gene76380.t1 MTR_4g116790 24.317 366 235 7 2 347 10 353 4.43e-25 107
MS.gene76380.t1 MTR_5g024740 30.252 238 156 5 23 254 8 241 4.53e-25 109
MS.gene76380.t1 MTR_5g024740 27.935 247 145 7 247 476 473 703 7.20e-16 80.9
MS.gene76380.t1 MTR_3g118530 31.140 228 147 5 30 251 15 238 1.80e-24 107
MS.gene76380.t1 MTR_3g118530 26.339 224 145 5 264 476 507 721 4.00e-17 85.1
MS.gene76380.t1 MTR_3g118530 32.828 198 124 4 30 222 15 208 2.01e-24 107
MS.gene76380.t1 MTR_8g073100 30.392 204 135 4 23 222 8 208 3.69e-24 106
MS.gene76380.t1 MTR_8g073100 25.225 222 150 3 264 476 485 699 3.22e-14 75.9
MS.gene76380.t1 MTR_5g096000 28.931 159 112 1 5 162 8 166 3.96e-13 70.5
MS.gene76380.t1 MTR_4g005090 22.246 463 297 14 47 477 57 488 5.75e-13 71.2
MS.gene76380.t1 MTR_8g077130 49.398 83 14 2 180 261 27 82 6.70e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76380.t1 AT4G36670 67.500 480 152 2 16 492 14 492 0.0 670
MS.gene76380.t1 AT2G18480 70.675 474 137 2 9 482 12 483 0.0 658
MS.gene76380.t1 AT3G18830 58.974 468 191 1 16 483 33 499 0.0 590
MS.gene76380.t1 AT2G16120 56.098 492 213 3 7 496 14 504 0.0 565
MS.gene76380.t1 AT2G16130 56.289 485 210 2 7 490 14 497 0.0 565
MS.gene76380.t1 AT2G20780 45.090 499 254 5 4 501 40 519 5.73e-151 441
MS.gene76380.t1 AT2G20780 44.880 459 233 5 44 501 22 461 1.29e-135 400
MS.gene76380.t1 AT2G43330 31.447 477 306 5 16 489 28 486 8.28e-66 221
MS.gene76380.t1 AT1G75220 30.258 466 292 6 21 482 50 486 5.75e-59 202
MS.gene76380.t1 AT5G16150 32.974 464 277 8 25 484 111 544 1.42e-58 203
MS.gene76380.t1 AT5G16150 32.974 464 277 8 25 484 111 544 1.42e-58 203
MS.gene76380.t1 AT5G16150 32.974 464 277 8 25 484 111 544 1.42e-58 203
MS.gene76380.t1 AT5G17010 33.735 415 252 6 69 479 104 499 3.07e-58 201
MS.gene76380.t1 AT5G17010 33.735 415 252 6 69 479 104 499 3.07e-58 201
MS.gene76380.t1 AT5G17010 33.735 415 252 6 69 479 104 499 3.07e-58 201
MS.gene76380.t1 AT5G26250 30.661 499 304 10 1 479 4 480 7.75e-58 200
MS.gene76380.t1 AT1G11260 30.470 489 290 13 20 482 25 489 1.19e-56 197
MS.gene76380.t1 AT3G03090 31.938 454 285 9 34 479 62 499 8.37e-56 194
MS.gene76380.t1 AT5G27350 29.006 493 310 9 2 490 16 472 2.46e-55 192
MS.gene76380.t1 AT3G05160 28.893 488 305 9 1 483 5 455 6.98e-55 191
MS.gene76380.t1 AT1G50310 28.889 495 298 13 24 490 30 498 8.38e-55 192
MS.gene76380.t1 AT5G59250 30.043 466 301 7 24 479 103 553 4.28e-54 191
MS.gene76380.t1 AT5G27360 28.657 499 304 10 2 490 20 476 5.62e-54 189
MS.gene76380.t1 AT3G19930 30.841 428 258 9 65 482 88 487 5.66e-54 190
MS.gene76380.t1 AT3G19930 30.841 428 258 9 65 482 88 487 5.66e-54 190
MS.gene76380.t1 AT1G19450 29.211 469 295 7 20 482 50 487 8.51e-54 189
MS.gene76380.t1 AT3G05960 30.722 485 288 12 18 479 20 479 1.06e-53 189
MS.gene76380.t1 AT5G27360 28.657 499 304 10 2 490 68 524 1.83e-53 189
MS.gene76380.t1 AT3G19940 29.652 489 291 11 24 485 30 492 3.45e-52 185
MS.gene76380.t1 AT4G02050 29.307 505 311 11 9 491 17 497 4.75e-52 184
MS.gene76380.t1 AT4G02050 29.307 505 311 11 9 491 17 497 4.75e-52 184
MS.gene76380.t1 AT3G05165 28.685 502 294 11 1 486 14 467 5.74e-52 183
MS.gene76380.t1 AT3G05165 28.685 502 294 11 1 486 14 467 5.74e-52 183
MS.gene76380.t1 AT3G05165 28.685 502 294 11 1 486 14 467 5.74e-52 183
MS.gene76380.t1 AT4G21480 29.084 502 308 11 6 482 9 487 4.08e-51 182
MS.gene76380.t1 AT5G26340 30.247 486 294 11 24 485 28 492 4.23e-51 182
MS.gene76380.t1 AT5G23270 29.287 519 300 14 2 485 7 493 6.95e-51 181
MS.gene76380.t1 AT3G05150 31.013 474 278 14 25 485 37 474 2.36e-50 179
MS.gene76380.t1 AT1G30220 36.932 352 198 7 16 361 25 358 3.37e-50 181
MS.gene76380.t1 AT1G30220 37.755 98 61 0 389 486 463 560 4.32e-15 78.6
MS.gene76380.t1 AT5G18840 28.807 486 309 11 7 486 28 482 9.45e-50 177
MS.gene76380.t1 AT3G05150 30.901 466 275 13 25 479 37 466 1.53e-49 177
MS.gene76380.t1 AT3G05150 30.901 466 275 13 25 479 37 466 1.53e-49 177
MS.gene76380.t1 AT3G05160 29.358 436 276 7 49 483 2 406 7.26e-49 173
MS.gene76380.t1 AT3G05160 29.358 436 276 7 49 483 2 406 7.26e-49 173
MS.gene76380.t1 AT1G77210 29.389 507 301 13 18 496 26 503 7.34e-49 176
MS.gene76380.t1 AT1G77210 29.389 507 301 13 18 496 26 503 7.34e-49 176
MS.gene76380.t1 AT1G54730 29.350 477 299 10 7 479 20 462 4.93e-48 172
MS.gene76380.t1 AT1G08900 27.879 495 297 13 7 486 13 462 1.32e-46 169
MS.gene76380.t1 AT1G08900 27.879 495 297 13 7 486 13 462 1.32e-46 169
MS.gene76380.t1 AT5G61520 27.692 520 315 14 1 485 1 494 1.35e-46 170
MS.gene76380.t1 AT1G08900 28.791 455 264 13 47 486 11 420 2.11e-46 167
MS.gene76380.t1 AT1G08930 28.211 475 307 12 7 479 46 488 2.42e-46 169
MS.gene76380.t1 AT1G08930 28.211 475 307 12 7 479 46 488 2.42e-46 169
MS.gene76380.t1 AT1G08900 28.791 455 264 13 47 486 45 454 2.73e-46 167
MS.gene76380.t1 AT5G61520 28.604 437 281 8 65 496 47 457 1.90e-45 166
MS.gene76380.t1 AT1G07340 29.545 484 290 12 20 478 24 481 3.36e-45 166
MS.gene76380.t1 AT1G05030 30.063 479 290 13 19 487 79 522 3.85e-45 166
MS.gene76380.t1 AT1G34580 28.834 489 298 11 24 485 29 494 5.80e-44 162
MS.gene76380.t1 AT4G04750 27.778 450 279 10 47 487 64 476 6.97e-44 162
MS.gene76380.t1 AT4G04750 27.778 450 279 10 47 487 64 476 6.97e-44 162
MS.gene76380.t1 AT1G34580 29.907 428 271 8 65 485 39 444 1.01e-43 160
MS.gene76380.t1 AT4G04750 27.778 450 279 10 47 487 108 520 1.42e-43 162
MS.gene76380.t1 AT2G35740 32.172 373 226 10 2 361 1 359 1.79e-43 162
MS.gene76380.t1 AT2G35740 37.374 99 62 0 381 479 458 556 1.06e-13 73.9
MS.gene76380.t1 AT3G05165 27.600 500 287 11 1 484 14 454 8.85e-43 159
MS.gene76380.t1 AT4G16480 32.240 366 226 8 5 361 8 360 1.28e-42 160
MS.gene76380.t1 AT4G16480 37.374 99 62 0 381 479 459 557 2.22e-14 76.3
MS.gene76380.t1 AT4G16480 32.240 366 226 8 5 361 8 360 1.28e-42 160
MS.gene76380.t1 AT4G16480 37.374 99 62 0 381 479 459 557 2.22e-14 76.3
MS.gene76380.t1 AT4G16480 32.240 366 226 8 5 361 8 360 1.28e-42 160
MS.gene76380.t1 AT4G16480 37.374 99 62 0 381 479 459 557 2.22e-14 76.3
MS.gene76380.t1 AT1G08890 28.294 463 286 12 25 479 33 457 1.68e-42 157
MS.gene76380.t1 AT1G67300 30.181 497 300 14 1 485 32 493 7.20e-42 156
MS.gene76380.t1 AT3G05155 27.158 475 307 8 8 479 17 455 9.08e-42 155
MS.gene76380.t1 AT1G54730 29.032 434 271 9 7 436 20 420 9.20e-42 155
MS.gene76380.t1 AT5G27360 28.325 406 253 7 89 490 1 372 1.18e-41 153
MS.gene76380.t1 AT5G27360 28.325 406 253 7 89 490 1 372 1.18e-41 153
MS.gene76380.t1 AT1G67300 29.920 498 299 15 1 485 32 492 1.46e-41 155
MS.gene76380.t1 AT1G67300 29.920 498 299 15 1 485 32 492 1.46e-41 155
MS.gene76380.t1 AT2G48020 27.329 483 303 11 6 481 19 460 1.52e-41 155
MS.gene76380.t1 AT2G48020 27.329 483 303 11 6 481 19 460 1.52e-41 155
MS.gene76380.t1 AT3G05165 28.670 436 248 10 1 420 14 402 7.33e-41 153
MS.gene76380.t1 AT3G05165 28.670 436 248 10 1 420 14 402 7.33e-41 153
MS.gene76380.t1 AT1G54730 27.883 477 285 11 7 479 20 441 8.64e-41 152
MS.gene76380.t1 AT1G05030 29.412 459 279 13 39 487 47 470 5.67e-40 150
MS.gene76380.t1 AT1G79820 29.814 483 296 13 6 480 41 488 1.33e-39 150
MS.gene76380.t1 AT1G79820 29.814 483 296 13 6 480 41 488 1.33e-39 150
MS.gene76380.t1 AT1G50310 29.076 368 227 11 131 490 14 355 2.20e-39 147
MS.gene76380.t1 AT5G27360 27.635 427 258 9 2 418 20 405 1.04e-38 146
MS.gene76380.t1 AT4G04760 25.474 475 300 9 18 485 43 470 1.18e-38 147
MS.gene76380.t1 AT4G04760 25.676 444 289 7 49 485 2 411 1.58e-38 145
MS.gene76380.t1 AT1G77210 29.630 378 230 9 127 496 5 354 4.16e-37 140
MS.gene76380.t1 AT1G08900 27.376 442 266 11 8 436 14 413 6.12e-37 141
MS.gene76380.t1 AT1G67300 30.365 438 255 15 1 425 32 432 6.88e-37 142
MS.gene76380.t1 AT1G67300 30.365 438 255 15 1 425 32 432 6.88e-37 142
MS.gene76380.t1 AT1G67300 30.769 429 247 15 1 416 32 423 1.29e-36 140
MS.gene76380.t1 AT1G67300 30.769 429 247 15 1 416 32 423 1.29e-36 140
MS.gene76380.t1 AT1G54730 29.877 405 249 10 7 408 20 392 3.38e-36 139
MS.gene76380.t1 AT1G54730 29.877 405 249 10 7 408 20 392 3.38e-36 139
MS.gene76380.t1 AT3G05400 24.324 481 329 9 6 484 14 461 1.33e-35 138
MS.gene76380.t1 AT1G08920 25.466 483 322 10 8 484 17 467 9.35e-35 136
MS.gene76380.t1 AT1G54730 27.880 434 255 10 7 436 20 399 1.24e-34 135
MS.gene76380.t1 AT1G79820 29.882 425 261 11 6 425 41 433 1.16e-33 132
MS.gene76380.t1 AT1G08920 25.306 490 321 11 8 484 17 474 1.89e-33 132
MS.gene76380.t1 AT4G04760 24.686 478 297 10 18 485 43 467 2.64e-33 132
MS.gene76380.t1 AT5G17010 28.675 415 209 8 69 479 105 436 1.64e-32 129
MS.gene76380.t1 AT1G20840 31.325 249 161 5 17 261 2 244 4.58e-31 127
MS.gene76380.t1 AT1G20840 28.295 258 157 6 254 496 489 733 9.17e-17 84.0
MS.gene76380.t1 AT1G20840 31.325 249 161 5 17 261 2 244 4.58e-31 127
MS.gene76380.t1 AT1G20840 28.295 258 157 6 254 496 489 733 9.17e-17 84.0
MS.gene76380.t1 AT3G05400 23.800 479 310 10 8 484 16 441 5.78e-31 125
MS.gene76380.t1 AT3G20460 23.790 496 316 14 4 484 40 488 7.52e-30 122
MS.gene76380.t1 AT3G51490 30.196 255 153 8 23 258 8 256 9.11e-30 124
MS.gene76380.t1 AT3G51490 29.961 257 155 8 249 492 486 730 2.49e-21 98.2
MS.gene76380.t1 AT3G51490 30.196 255 153 8 23 258 8 256 1.05e-29 124
MS.gene76380.t1 AT3G51490 29.839 248 159 6 249 492 486 722 2.05e-19 92.0
MS.gene76380.t1 AT1G54730 27.901 405 236 11 7 408 20 371 2.33e-29 119
MS.gene76380.t1 AT1G08920 25.057 435 289 8 8 436 17 420 1.55e-28 118
MS.gene76380.t1 AT1G54730 28.280 343 214 7 7 347 20 332 1.38e-27 113
MS.gene76380.t1 AT3G05155 26.377 345 216 7 8 349 17 326 5.17e-26 108
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.323 198 125 4 30 222 15 208 6.50e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 456 727 2.85e-20 94.7
MS.gene76380.t1 AT4G35300 32.821 195 122 4 30 219 15 205 6.76e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 446 717 3.14e-20 94.7
MS.gene76380.t1 AT4G35300 32.821 195 122 4 30 219 15 205 6.76e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 446 717 3.14e-20 94.7
MS.gene76380.t1 AT4G35300 32.821 195 122 4 30 219 15 205 6.76e-26 112
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 446 717 3.14e-20 94.7
MS.gene76380.t1 AT3G51490 33.333 198 113 6 76 258 13 206 7.13e-25 108
MS.gene76380.t1 AT3G51490 29.961 257 155 8 249 492 436 680 2.23e-21 98.2
MS.gene76380.t1 AT1G54730 28.155 309 194 6 7 313 20 302 3.01e-24 103
MS.gene76380.t1 AT1G54730 28.155 309 194 6 7 313 20 302 3.01e-24 103
MS.gene76380.t1 AT2G48020 26.260 377 234 9 6 375 19 358 7.87e-24 103
MS.gene76380.t1 AT2G48020 25.429 350 219 8 6 350 19 331 7.30e-21 94.4
MS.gene76380.t1 AT4G35300 27.682 289 179 7 208 483 259 530 4.10e-20 94.0
MS.gene76380.t1 AT1G79820 30.275 218 141 5 6 218 41 252 5.62e-17 83.6
MS.gene76380.t1 AT1G76430 21.429 532 342 14 18 495 18 527 3.61e-11 65.9

Find 102 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATGGTGTCCATCGTTTC+TGG 0.167687 8.1:-30005639 MS.gene76380:CDS
TATGTTGCTTTCTTTAATAT+TGG 0.219271 8.1:-30003370 MS.gene76380:CDS
AAAGCTTTGCCTTTAGTTTC+AGG 0.224380 8.1:+30003133 None:intergenic
GTTGTTCATAAAGGAAGATT+TGG 0.239451 8.1:-30004403 MS.gene76380:CDS
ATGTTGCTTTCTTTAATATT+GGG 0.247224 8.1:-30003369 MS.gene76380:CDS
CATCCTTGGTGCAGGTCTAA+TGG 0.255622 8.1:-30004247 MS.gene76380:CDS
ACCATTAAAATCGCGTAGTT+TGG 0.273263 8.1:+30004216 None:intergenic
GATTATTGGGCTTACGCTAT+TGG 0.276072 8.1:-30003473 MS.gene76380:CDS
AGCACCGGAGGAATGATTAT+TGG 0.277723 8.1:-30003487 MS.gene76380:CDS
GTGTCCATCGTTTCTGGTTA+TGG 0.291709 8.1:-30005633 MS.gene76380:intron
GCTTTCTTTAATATTGGGCT+TGG 0.305984 8.1:-30003364 MS.gene76380:CDS
GAACTATAAACCCAAGTAAT+AGG 0.312160 8.1:+30003340 None:intergenic
ATCCTTGGTGCAGGTCTAAT+GGG 0.322241 8.1:-30004246 MS.gene76380:CDS
TTGGGCTTGGGCCTATTACT+TGG 0.331261 8.1:-30003351 MS.gene76380:CDS
ATTGGTATTGGAATCTTGTT+AGG 0.334944 8.1:-30004075 MS.gene76380:CDS
CCTGAACTTTGTATTGGTAT+TGG 0.335903 8.1:-30004087 MS.gene76380:CDS
AACTAAAGGCAAAGCTTTAG+AGG 0.338165 8.1:-30003128 MS.gene76380:CDS
GCACCGGAGGAATGATTATT+GGG 0.356340 8.1:-30003486 MS.gene76380:CDS
ATTATTGGGCTTACGCTATT+GGG 0.356624 8.1:-30003472 MS.gene76380:CDS
CTCACCAAGGTGAAGGGGTT+TGG 0.362291 8.1:-30003765 MS.gene76380:CDS
AGGCAAAGCTTTAGAGGAAA+TGG 0.362549 8.1:-30003122 MS.gene76380:CDS
CTTTCTTTAATATTGGGCTT+GGG 0.375420 8.1:-30003363 MS.gene76380:CDS
GCCTCAATATTGTTCATCCT+TGG 0.375575 8.1:-30004261 MS.gene76380:CDS
CATGGAAACAACAGCATTCA+TGG 0.381043 8.1:+30003255 None:intergenic
TTGTTCATAAAGGAAGATTT+GGG 0.381071 8.1:-30004402 MS.gene76380:CDS
GGAGGTTCTTCCGGCTGTTA+AGG 0.389503 8.1:+30004317 None:intergenic
GGACACCATTGAAGCAACTA+TGG 0.409338 8.1:+30005650 None:intergenic
TTGTGCCATAGTTGCTTCAA+TGG 0.411172 8.1:-30005655 MS.gene76380:CDS
ATTTGTTGAACGTGTTCGTT+TGG 0.417351 8.1:+30005688 None:intergenic
TCTTTGCCTGAACTTTGTAT+TGG 0.418955 8.1:-30004093 MS.gene76380:CDS
TGGGCTTGGGCCTATTACTT+GGG 0.420201 8.1:-30003350 MS.gene76380:CDS
GATATTTCCTTTGAAGTTGA+GGG 0.420965 8.1:-30003314 MS.gene76380:CDS
GGAAGATGTGTTTGTGGTGT+AGG 0.426049 8.1:-30004192 MS.gene76380:CDS
TGGAGCAATGTTGTTCATAA+AGG 0.432311 8.1:-30004412 MS.gene76380:CDS
GAAATTTCAGCTGAATAAAC+CGG 0.433520 8.1:+30004144 None:intergenic
CCAATACCAATACAAAGTTC+AGG 0.435753 8.1:+30004087 None:intergenic
ATCTATAAAGCTATCACAAT+AGG 0.446017 8.1:-30003220 MS.gene76380:CDS
TTGGTTATGCAAGGTCAATT+AGG 0.450727 8.1:-30003919 MS.gene76380:CDS
GGCCCATAAAACGTTTCCAT+TGG 0.462640 8.1:+30003423 None:intergenic
ACATACTAGACCTTCTGTAT+TGG 0.463685 8.1:+30003046 None:intergenic
TTAAACCTATGTGCATTAGT+AGG 0.465555 8.1:-30004342 MS.gene76380:CDS
ATTTGAGTTTGAAACTTGGT+TGG 0.470871 8.1:-30004023 MS.gene76380:CDS
ATTTCTTCTGCTTCATCAAG+AGG 0.475582 8.1:-30004126 MS.gene76380:CDS
AATGTAATCGGAGGTTCTTC+CGG 0.477347 8.1:+30004308 None:intergenic
ATATTGTTCATCCTTGGTGC+AGG 0.483894 8.1:-30004255 MS.gene76380:CDS
TGTGTTTGTGGTGTAGGTGT+TGG 0.486277 8.1:-30004186 MS.gene76380:CDS
AAATATTTGAGTTTGAAACT+TGG 0.488815 8.1:-30004027 MS.gene76380:CDS
GTATTGGAGTTGCTGTGAAT+AGG 0.501629 8.1:-30003279 MS.gene76380:CDS
GGTGCAGGTCTAATGGGGTA+TGG 0.502064 8.1:-30004240 MS.gene76380:CDS
GTAGCGACGTCCAATGTAAT+CGG 0.502796 8.1:+30004296 None:intergenic
CAAAACGCTACTACAAATGA+AGG 0.504432 8.1:+30003973 None:intergenic
CCTTTGAAGTTGAGGGCACA+AGG 0.507181 8.1:-30003307 MS.gene76380:CDS
AGATATTTCCTTTGAAGTTG+AGG 0.507195 8.1:-30003315 MS.gene76380:CDS
ATCATCATGATAACAAATCA+AGG 0.511062 8.1:-30005723 None:intergenic
TTACTTGCAACTATTGGAGT+AGG 0.513606 8.1:-30003586 MS.gene76380:CDS
AATATTAAAGAAAGCAACAT+AGG 0.515377 8.1:+30003372 None:intergenic
CATACGTTGCGACGATGCTA+AGG 0.516022 8.1:+30003395 None:intergenic
CAAAAGTCTCACCAAGGTGA+AGG 0.519691 8.1:-30003772 MS.gene76380:CDS
ATGGTTGGAAGATGTGTTTG+TGG 0.525527 8.1:-30004198 MS.gene76380:CDS
ACCAACCACCTTGGTGACTC+AGG 0.530664 8.1:+30003937 None:intergenic
CTTGGTTGGAGATTAATGCT+TGG 0.531239 8.1:-30004009 MS.gene76380:CDS
ATAGATTGAAATAAAAGTCA+TGG 0.531568 8.1:+30003237 None:intergenic
AGGGCACAAGGAGCAAGTAT+TGG 0.532018 8.1:-30003295 MS.gene76380:CDS
CTTTCCAAACCCCTTCACCT+TGG 0.537035 8.1:+30003761 None:intergenic
AAAAGTCTCACCAAGGTGAA+GGG 0.542978 8.1:-30003771 MS.gene76380:CDS
TGCGACGATGCTAAGGATCA+AGG 0.543348 8.1:+30003402 None:intergenic
CTTTGCTCTTATGATAGCAC+CGG 0.543480 8.1:-30004163 MS.gene76380:CDS
CCTTGTGCCCTCAACTTCAA+AGG 0.544461 8.1:+30003307 None:intergenic
AAGCCCAATAATCATTCCTC+CGG 0.546220 8.1:+30003483 None:intergenic
TATAAAGCTATCACAATAGG+TGG 0.548135 8.1:-30003217 MS.gene76380:CDS
AGCTTTAGAGGAAATGGAGA+TGG 0.549739 8.1:-30003116 MS.gene76380:CDS
AGCAACTATGGCACAAGCAA+AGG 0.549760 8.1:+30005662 None:intergenic
CTTTGCCTTTAGTTTCAGGA+AGG 0.554311 8.1:+30003137 None:intergenic
TCAGATACTGGTGTTATGAG+TGG 0.559878 8.1:-30004432 MS.gene76380:intron
TGGATGTTAATTGCTGCGGT+TGG 0.560539 8.1:-30003706 MS.gene76380:CDS
GACCAACGCCTTCTGTACGT+TGG 0.561189 8.1:-30003726 MS.gene76380:CDS
AGAAGCAGAACTTCGTCTCA+AGG 0.568665 8.1:-30003854 MS.gene76380:CDS
GGAAGAACCTCCGATTACAT+TGG 0.573049 8.1:-30004306 MS.gene76380:CDS
GCCTGAGTCACCAAGGTGGT+TGG 0.573571 8.1:-30003938 MS.gene76380:CDS
TAACATAACAGCTTCAATAC+CGG 0.576140 8.1:+30003660 None:intergenic
TTAGTAGGATCCTTAACAGC+CGG 0.586504 8.1:-30004327 MS.gene76380:CDS
ACACAACAAGAGGTTCTAGC+AGG 0.599568 8.1:-30004369 MS.gene76380:CDS
AGAAATGGATCCAATACAGA+AGG 0.599938 8.1:-30003056 MS.gene76380:CDS
CCAAGGTGGTTGGTTATGCA+AGG 0.600557 8.1:-30003928 MS.gene76380:CDS
AATACAAAGTTCAGGCAAAG+AGG 0.601400 8.1:+30004095 None:intergenic
CCTTGCATAACCAACCACCT+TGG 0.601505 8.1:+30003928 None:intergenic
ACCAAGGATGAACAATATTG+AGG 0.606197 8.1:+30004260 None:intergenic
ATTAACATCCAACGTACAGA+AGG 0.606833 8.1:+30003718 None:intergenic
TCCTTGGTGCAGGTCTAATG+GGG 0.608348 8.1:-30004245 MS.gene76380:CDS
AGGATCCTACTAATGCACAT+AGG 0.612414 8.1:+30004337 None:intergenic
ACTGTGGTAGATAAATCCAA+TGG 0.612575 8.1:-30003439 MS.gene76380:CDS
AAAGTCTCACCAAGGTGAAG+GGG 0.615900 8.1:-30003770 MS.gene76380:CDS
AATCAGCGACACACAACAAG+AGG 0.618953 8.1:-30004379 MS.gene76380:CDS
TAACAATGCCTGAGTCACCA+AGG 0.652487 8.1:-30003945 MS.gene76380:CDS
ATTGGGTCTTAGCTTGACTG+TGG 0.661644 8.1:-30003455 MS.gene76380:CDS
CGTACCATAACCAGAAACGA+TGG 0.664147 8.1:+30005629 None:intergenic
ATCCAACGTACAGAAGGCGT+TGG 0.670561 8.1:+30003724 None:intergenic
GCGACGTCCAATGTAATCGG+AGG 0.683787 8.1:+30004299 None:intergenic
ACGTTGGATGTTAATTGCTG+CGG 0.688098 8.1:-30003710 MS.gene76380:CDS
ACCCCATTAGACCTGCACCA+AGG 0.701724 8.1:+30004244 None:intergenic
TTACCTCAAAAGTCTCACCA+AGG 0.718107 8.1:-30003778 MS.gene76380:CDS
CAATGCCTGAGTCACCAAGG+TGG 0.763732 8.1:-30003942 MS.gene76380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAAATAAAATTAAAAG+TGG + chr8.1:30003190-30003209 None:intergenic 10.0%
!! ACAAAAGAAAAAAAAATTAT+TGG + chr8.1:30003238-30003257 None:intergenic 10.0%
!!! ATTATAAACGAAAAATTTTT+AGG - chr8.1:30003314-30003333 MS.gene76380:CDS 10.0%
!!! TAAGTAAAAAAACTTTTTTT+AGG + chr8.1:30003393-30003412 None:intergenic 10.0%
!!! TATATATCAAACTATTTTTT+GGG - chr8.1:30004717-30004736 MS.gene76380:intron 10.0%
!!! TTATATATCAAACTATTTTT+TGG - chr8.1:30004716-30004735 MS.gene76380:intron 10.0%
!! AAAATGAAAAAATTGAATAG+AGG - chr8.1:30003560-30003579 MS.gene76380:CDS 15.0%
!! AAATTGCATTGAAAATTAAA+TGG + chr8.1:30004034-30004053 None:intergenic 15.0%
!! TGATATTTCATTCATAATAA+TGG - chr8.1:30003665-30003684 MS.gene76380:CDS 15.0%
!!! AATAAATTAACTTGAAGAAA+AGG + chr8.1:30003604-30003623 None:intergenic 15.0%
!!! AATTTGAGTTTTTATTTTGA+GGG - chr8.1:30003723-30003742 MS.gene76380:CDS 15.0%
!!! AGAACAAATTTTTTTGTTTT+CGG - chr8.1:30003916-30003935 MS.gene76380:CDS 15.0%
!!! TAATTTGAGTTTTTATTTTG+AGG - chr8.1:30003722-30003741 MS.gene76380:CDS 15.0%
!!! TTCAAGTTAATTTATTTTGA+GGG - chr8.1:30003608-30003627 MS.gene76380:CDS 15.0%
!!! TTTTTACTTATATTAATGAC+CGG - chr8.1:30003403-30003422 MS.gene76380:CDS 15.0%
!! AATATTAAAGAAAGCAACAT+AGG + chr8.1:30005399-30005418 None:intergenic 20.0%
!! ATAATGGTAACAATAAAAGA+AGG - chr8.1:30003681-30003700 MS.gene76380:CDS 20.0%
!! ATAGATTGAAATAAAAGTCA+TGG + chr8.1:30005534-30005553 None:intergenic 20.0%
!! TGAGTCAAAAAAAATATTTG+TGG + chr8.1:30003459-30003478 None:intergenic 20.0%
!!! AAATATTTGAGTTTGAAACT+TGG - chr8.1:30004741-30004760 MS.gene76380:intron 20.0%
!!! ATGTTGCTTTCTTTAATATT+GGG - chr8.1:30005399-30005418 MS.gene76380:intron 20.0%
!!! ATTTTTACCACTTGATTTTT+TGG + chr8.1:30005684-30005703 None:intergenic 20.0%
!!! CTTCAAGTTAATTTATTTTG+AGG - chr8.1:30003607-30003626 MS.gene76380:CDS 20.0%
!!! TATGTTGCTTTCTTTAATAT+TGG - chr8.1:30005398-30005417 MS.gene76380:intron 20.0%
!!! TTTTCGTTTATAATTGTGAT+CGG + chr8.1:30003308-30003327 None:intergenic 20.0%
! AAAATCAAGTGGTAAAAATG+TGG - chr8.1:30005685-30005704 MS.gene76380:CDS 25.0%
! AATACGATGCTTATTTAAGA+CGG - chr8.1:30004239-30004258 MS.gene76380:CDS 25.0%
! AATATGCACTTAAACAACAA+GGG + chr8.1:30003778-30003797 None:intergenic 25.0%
! ACAAAAACATGAATGTAACT+AGG - chr8.1:30003496-30003515 MS.gene76380:CDS 25.0%
! ACATGATTAATTTCAGATAC+TGG - chr8.1:30004324-30004343 MS.gene76380:CDS 25.0%
! ATCTATAAAGCTATCACAAT+AGG - chr8.1:30005548-30005567 MS.gene76380:intron 25.0%
! CATTTAACAATTAGTGTATG+TGG - chr8.1:30003339-30003358 MS.gene76380:CDS 25.0%
! GTGGTTAATTGAACTTTATA+TGG - chr8.1:30003531-30003550 MS.gene76380:CDS 25.0%
! TAAAAATGTGGCAATAGAAA+TGG - chr8.1:30005697-30005716 MS.gene76380:CDS 25.0%
! TTGTTCATAAAGGAAGATTT+GGG - chr8.1:30004366-30004385 MS.gene76380:CDS 25.0%
!! GTTTTTACCAAAAAATCAAG+TGG - chr8.1:30005674-30005693 MS.gene76380:CDS 25.0%
!!! GTTTTTGTTTCTGATTTTTG+TGG + chr8.1:30003484-30003503 None:intergenic 25.0%
!!! TTGTTTTTACTTGACAAACT+TGG - chr8.1:30005236-30005255 MS.gene76380:intron 25.0%
ATATGCACTTAAACAACAAG+GGG + chr8.1:30003777-30003796 None:intergenic 30.0%
CAATATGCACTTAAACAACA+AGG + chr8.1:30003779-30003798 None:intergenic 30.0%
CTTTCTTTAATATTGGGCTT+GGG - chr8.1:30005405-30005424 MS.gene76380:intron 30.0%
GAAATTTCAGCTGAATAAAC+CGG + chr8.1:30004627-30004646 None:intergenic 30.0%
GAACTATAAACCCAAGTAAT+AGG + chr8.1:30005431-30005450 None:intergenic 30.0%
GTTGTTCATAAAGGAAGATT+TGG - chr8.1:30004365-30004384 MS.gene76380:CDS 30.0%
TAACATAACAGCTTCAATAC+CGG + chr8.1:30005111-30005130 None:intergenic 30.0%
TATAAAGCTATCACAATAGG+TGG - chr8.1:30005551-30005570 MS.gene76380:intron 30.0%
TCACAAATAAAACACAGACA+TGG - chr8.1:30004271-30004290 MS.gene76380:CDS 30.0%
TTAAACCTATGTGCATTAGT+AGG - chr8.1:30004426-30004445 MS.gene76380:CDS 30.0%
TTACTTATATTAATGACCGG+AGG - chr8.1:30003406-30003425 MS.gene76380:CDS 30.0%
! AAGCTTTTACTTGCAACTAT+TGG - chr8.1:30005176-30005195 MS.gene76380:intron 30.0%
! AATCCAATGGAAACGTTTTA+TGG - chr8.1:30005342-30005361 MS.gene76380:intron 30.0%
! ATACGATGCTTATTTAAGAC+GGG - chr8.1:30004240-30004259 MS.gene76380:CDS 30.0%
! ATCCAATGGAAACGTTTTAT+GGG - chr8.1:30005343-30005362 MS.gene76380:intron 30.0%
! ATTGGTATTGGAATCTTGTT+AGG - chr8.1:30004693-30004712 MS.gene76380:intron 30.0%
! ATTTGAGTTTGAAACTTGGT+TGG - chr8.1:30004745-30004764 MS.gene76380:intron 30.0%
! CCAAGAATTTTCAAAAAAGC+AGG - chr8.1:30005137-30005156 MS.gene76380:intron 30.0%
! TCAAACGTGAAACTTCTTTT+GGG + chr8.1:30003980-30003999 None:intergenic 30.0%
! TTCAAACGTGAAACTTCTTT+TGG + chr8.1:30003981-30004000 None:intergenic 30.0%
! TTTTTCCTTCCTGAAACTAA+AGG - chr8.1:30005626-30005645 MS.gene76380:intron 30.0%
!! AGATATTTCCTTTGAAGTTG+AGG - chr8.1:30005453-30005472 MS.gene76380:intron 30.0%
!! GATATTTCCTTTGAAGTTGA+GGG - chr8.1:30005454-30005473 MS.gene76380:intron 30.0%
!!! AACTAGGTATTGTTTTTACG+TGG - chr8.1:30003512-30003531 MS.gene76380:CDS 30.0%
!!! CCTGCTTTTTTGAAAATTCT+TGG + chr8.1:30005140-30005159 None:intergenic 30.0%
AAGGATATAAAAATCGCTGC+TGG - chr8.1:30004933-30004952 MS.gene76380:intron 35.0%
AATACAAAGTTCAGGCAAAG+AGG + chr8.1:30004676-30004695 None:intergenic 35.0%
ACCAAGGATGAACAATATTG+AGG + chr8.1:30004511-30004530 None:intergenic 35.0%
ACCATTAAAATCGCGTAGTT+TGG + chr8.1:30004555-30004574 None:intergenic 35.0%
ACTGTGGTAGATAAATCCAA+TGG - chr8.1:30005329-30005348 MS.gene76380:intron 35.0%
AGAAATGGATCCAATACAGA+AGG - chr8.1:30005712-30005731 MS.gene76380:CDS 35.0%
ATTAACATCCAACGTACAGA+AGG + chr8.1:30005053-30005072 None:intergenic 35.0%
ATTATTGGGCTTACGCTATT+GGG - chr8.1:30005296-30005315 MS.gene76380:intron 35.0%
ATTTCTTCTGCTTCATCAAG+AGG - chr8.1:30004642-30004661 MS.gene76380:intron 35.0%
CAAAACGCTACTACAAATGA+AGG + chr8.1:30004798-30004817 None:intergenic 35.0%
CCAATACCAATACAAAGTTC+AGG + chr8.1:30004684-30004703 None:intergenic 35.0%
GCTTTCTTTAATATTGGGCT+TGG - chr8.1:30005404-30005423 MS.gene76380:intron 35.0%
TCGATGAGTAAGTAAGGTAT+GGG + chr8.1:30003369-30003388 None:intergenic 35.0%
TCGTTTATAATTGTGATCGG+AGG + chr8.1:30003305-30003324 None:intergenic 35.0%
TCTTTGCCTGAACTTTGTAT+TGG - chr8.1:30004675-30004694 MS.gene76380:intron 35.0%
TGGAGCAATGTTGTTCATAA+AGG - chr8.1:30004356-30004375 MS.gene76380:CDS 35.0%
TTACTTGCAACTATTGGAGT+AGG - chr8.1:30005182-30005201 MS.gene76380:intron 35.0%
TTAGGTTCGATGAGTAAGTA+AGG + chr8.1:30003375-30003394 None:intergenic 35.0%
TTCGATGAGTAAGTAAGGTA+TGG + chr8.1:30003370-30003389 None:intergenic 35.0%
TTGGTTATGCAAGGTCAATT+AGG - chr8.1:30004849-30004868 MS.gene76380:intron 35.0%
! AAAGCTTTGCCTTTAGTTTC+AGG + chr8.1:30005638-30005657 None:intergenic 35.0%
! AACTAAAGGCAAAGCTTTAG+AGG - chr8.1:30005640-30005659 MS.gene76380:CDS 35.0%
! AGACTTTTGCAAATTAGCAC+CGG - chr8.1:30005266-30005285 MS.gene76380:intron 35.0%
! ATGTTACTTGATCCCACTTA+GGG + chr8.1:30003946-30003965 None:intergenic 35.0%
! ATTTGTTGAACGTGTTCGTT+TGG + chr8.1:30003083-30003102 None:intergenic 35.0%
! CCTGAACTTTGTATTGGTAT+TGG - chr8.1:30004681-30004700 MS.gene76380:intron 35.0%
! TACGATGCTTATTTAAGACG+GGG - chr8.1:30004241-30004260 MS.gene76380:CDS 35.0%
! TATGTTACTTGATCCCACTT+AGG + chr8.1:30003947-30003966 None:intergenic 35.0%
! TCCAAACTACGCGATTTTAA+TGG - chr8.1:30004551-30004570 MS.gene76380:intron 35.0%
! TTTTGTCTTGAGTAATCCTC+CGG + chr8.1:30003425-30003444 None:intergenic 35.0%
!! AACTACGCGATTTTAATGGT+TGG - chr8.1:30004555-30004574 MS.gene76380:intron 35.0%
!!! CATTTTTTCGAACATGCAAC+CGG - chr8.1:30005089-30005108 MS.gene76380:intron 35.0%
!!! CTGGTATATCTGTTTTAGCT+TGG - chr8.1:30005591-30005610 MS.gene76380:intron 35.0%
!!! GGAAGTTTTTTCATGTTTGC+TGG - chr8.1:30005572-30005591 MS.gene76380:intron 35.0%
AAAAGTCTCACCAAGGTGAA+GGG - chr8.1:30004997-30005016 MS.gene76380:intron 40.0%
AAGCCCAATAATCATTCCTC+CGG + chr8.1:30005288-30005307 None:intergenic 40.0%
AATGTAATCGGAGGTTCTTC+CGG + chr8.1:30004463-30004482 None:intergenic 40.0%
ACGTTGGATGTTAATTGCTG+CGG - chr8.1:30005058-30005077 MS.gene76380:intron 40.0%
AGGATCCTACTAATGCACAT+AGG + chr8.1:30004434-30004453 None:intergenic 40.0%
ATGGTTGGAAGATGTGTTTG+TGG - chr8.1:30004570-30004589 MS.gene76380:intron 40.0%
CATGGAAACAACAGCATTCA+TGG + chr8.1:30005516-30005535 None:intergenic 40.0%
CGATGAGTAAGTAAGGTATG+GGG + chr8.1:30003368-30003387 None:intergenic 40.0%
CTTGGTTGGAGATTAATGCT+TGG - chr8.1:30004759-30004778 MS.gene76380:intron 40.0%
CTTTGCTCTTATGATAGCAC+CGG - chr8.1:30004605-30004624 MS.gene76380:intron 40.0%
GATTATTGGGCTTACGCTAT+TGG - chr8.1:30005295-30005314 MS.gene76380:intron 40.0%
GCCTCAATATTGTTCATCCT+TGG - chr8.1:30004507-30004526 MS.gene76380:intron 40.0%
GTATTGGAGTTGCTGTGAAT+AGG - chr8.1:30005489-30005508 MS.gene76380:intron 40.0%
TTACCTCAAAAGTCTCACCA+AGG - chr8.1:30004990-30005009 MS.gene76380:intron 40.0%
TTAGTAGGATCCTTAACAGC+CGG - chr8.1:30004441-30004460 MS.gene76380:intron 40.0%
TTGTGCCATAGTTGCTTCAA+TGG - chr8.1:30003113-30003132 MS.gene76380:CDS 40.0%
! ACGATGCTTATTTAAGACGG+GGG - chr8.1:30004242-30004261 MS.gene76380:CDS 40.0%
! AGGGATTCAAGTTTAGTGAC+CGG - chr8.1:30003742-30003761 MS.gene76380:CDS 40.0%
! ATATTGTTCATCCTTGGTGC+AGG - chr8.1:30004513-30004532 MS.gene76380:intron 40.0%
! CTTTGCCTTTAGTTTCAGGA+AGG + chr8.1:30005634-30005653 None:intergenic 40.0%
! GTTTTCGGTTTTCCCTAAGT+GGG - chr8.1:30003931-30003950 MS.gene76380:CDS 40.0%
! TGTTTTCGGTTTTCCCTAAG+TGG - chr8.1:30003930-30003949 MS.gene76380:CDS 40.0%
!! ACGTGAAACTTCTTTTGGGA+AGG + chr8.1:30003976-30003995 None:intergenic 40.0%
!! AGCTTTAGAGGAAATGGAGA+TGG - chr8.1:30005652-30005671 MS.gene76380:CDS 40.0%
!! AGGCAAAGCTTTAGAGGAAA+TGG - chr8.1:30005646-30005665 MS.gene76380:CDS 40.0%
!! GAAACTTCTTTTGGGAAGGA+GGG + chr8.1:30003972-30003991 None:intergenic 40.0%
!! TCAGATACTGGTGTTATGAG+TGG - chr8.1:30004336-30004355 MS.gene76380:CDS 40.0%
!! TGAAACTTCTTTTGGGAAGG+AGG + chr8.1:30003973-30003992 None:intergenic 40.0%
AAAGTCTCACCAAGGTGAAG+GGG - chr8.1:30004998-30005017 MS.gene76380:intron 45.0%
AATCAGCGACACACAACAAG+AGG - chr8.1:30004389-30004408 MS.gene76380:CDS 45.0%
AGAAGCAGAACTTCGTCTCA+AGG - chr8.1:30004914-30004933 MS.gene76380:intron 45.0%
AGCAACTATGGCACAAGCAA+AGG + chr8.1:30003109-30003128 None:intergenic 45.0%
CAAAAGTCTCACCAAGGTGA+AGG - chr8.1:30004996-30005015 MS.gene76380:intron 45.0%
CAACAAGGGGATCAAGAAAC+CGG + chr8.1:30003764-30003783 None:intergenic 45.0%
CGTACCATAACCAGAAACGA+TGG + chr8.1:30003142-30003161 None:intergenic 45.0%
GCACCGGAGGAATGATTATT+GGG - chr8.1:30005282-30005301 MS.gene76380:intron 45.0%
GGAAGAACCTCCGATTACAT+TGG - chr8.1:30004462-30004481 MS.gene76380:intron 45.0%
GGAAGATGTGTTTGTGGTGT+AGG - chr8.1:30004576-30004595 MS.gene76380:intron 45.0%
GGACACCATTGAAGCAACTA+TGG + chr8.1:30003121-30003140 None:intergenic 45.0%
GGCCCATAAAACGTTTCCAT+TGG + chr8.1:30005348-30005367 None:intergenic 45.0%
GTAGCGACGTCCAATGTAAT+CGG + chr8.1:30004475-30004494 None:intergenic 45.0%
TAACAATGCCTGAGTCACCA+AGG - chr8.1:30004823-30004842 MS.gene76380:intron 45.0%
TCAATGGTGTCCATCGTTTC+TGG - chr8.1:30003129-30003148 MS.gene76380:CDS 45.0%
TGGATGTTAATTGCTGCGGT+TGG - chr8.1:30005062-30005081 MS.gene76380:intron 45.0%
TGTGTTTGTGGTGTAGGTGT+TGG - chr8.1:30004582-30004601 MS.gene76380:intron 45.0%
! ACACAACAAGAGGTTCTAGC+AGG - chr8.1:30004399-30004418 MS.gene76380:CDS 45.0%
! AGCACCGGAGGAATGATTAT+TGG - chr8.1:30005281-30005300 MS.gene76380:intron 45.0%
! ATCCTTGGTGCAGGTCTAAT+GGG - chr8.1:30004522-30004541 MS.gene76380:intron 45.0%
! ATTGGGTCTTAGCTTGACTG+TGG - chr8.1:30005313-30005332 MS.gene76380:intron 45.0%
! TCACCTTGGTGAGACTTTTG+AGG + chr8.1:30004996-30005015 None:intergenic 45.0%
!! CTTTTGCAAATTAGCACCGG+AGG - chr8.1:30005269-30005288 MS.gene76380:intron 45.0%
!! GTGTCCATCGTTTCTGGTTA+TGG - chr8.1:30003135-30003154 MS.gene76380:CDS 45.0%
!! AAATTATCATTATTAATTAT+TGG + chr8.1:30004155-30004174 None:intergenic 5.0%
!! AATAATTAATAATGATAATT+TGG - chr8.1:30004154-30004173 MS.gene76380:CDS 5.0%
AGGGCACAAGGAGCAAGTAT+TGG - chr8.1:30005473-30005492 MS.gene76380:intron 50.0%
CATACGTTGCGACGATGCTA+AGG + chr8.1:30005376-30005395 None:intergenic 50.0%
CCTTGCATAACCAACCACCT+TGG + chr8.1:30004843-30004862 None:intergenic 50.0%
CCTTGTGCCCTCAACTTCAA+AGG + chr8.1:30005464-30005483 None:intergenic 50.0%
CTTTCCAAACCCCTTCACCT+TGG + chr8.1:30005010-30005029 None:intergenic 50.0%
TGCGACGATGCTAAGGATCA+AGG + chr8.1:30005369-30005388 None:intergenic 50.0%
TGGGCTTGGGCCTATTACTT+GGG - chr8.1:30005418-30005437 MS.gene76380:intron 50.0%
TTGGGCTTGGGCCTATTACT+TGG - chr8.1:30005417-30005436 MS.gene76380:intron 50.0%
! ATCCAACGTACAGAAGGCGT+TGG + chr8.1:30005047-30005066 None:intergenic 50.0%
! CATCCTTGGTGCAGGTCTAA+TGG - chr8.1:30004521-30004540 MS.gene76380:intron 50.0%
! CCAAGGTGGTTGGTTATGCA+AGG - chr8.1:30004840-30004859 MS.gene76380:intron 50.0%
! TCCTTGGTGCAGGTCTAATG+GGG - chr8.1:30004523-30004542 MS.gene76380:intron 50.0%
!! CCTTTGAAGTTGAGGGCACA+AGG - chr8.1:30005461-30005480 MS.gene76380:intron 50.0%
ACCCCATTAGACCTGCACCA+AGG + chr8.1:30004527-30004546 None:intergenic 55.0%
CAATGCCTGAGTCACCAAGG+TGG - chr8.1:30004826-30004845 MS.gene76380:intron 55.0%
CTCACCAAGGTGAAGGGGTT+TGG - chr8.1:30005003-30005022 MS.gene76380:intron 55.0%
GACCAACGCCTTCTGTACGT+TGG - chr8.1:30005042-30005061 MS.gene76380:intron 55.0%
GCGACGTCCAATGTAATCGG+AGG + chr8.1:30004472-30004491 None:intergenic 55.0%
GGAGGTTCTTCCGGCTGTTA+AGG + chr8.1:30004454-30004473 None:intergenic 55.0%
GGTGCAGGTCTAATGGGGTA+TGG - chr8.1:30004528-30004547 MS.gene76380:intron 55.0%
! ACCAACCACCTTGGTGACTC+AGG + chr8.1:30004834-30004853 None:intergenic 55.0%
GCCTGAGTCACCAAGGTGGT+TGG - chr8.1:30004830-30004849 MS.gene76380:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 30003051 30005739 30003051 ID=MS.gene76380
chr8.1 mRNA 30003051 30005739 30003051 ID=MS.gene76380.t1;Parent=MS.gene76380
chr8.1 exon 30005634 30005739 30005634 ID=MS.gene76380.t1.exon1;Parent=MS.gene76380.t1
chr8.1 CDS 30005634 30005739 30005634 ID=cds.MS.gene76380.t1;Parent=MS.gene76380.t1
chr8.1 exon 30003051 30004450 30003051 ID=MS.gene76380.t1.exon2;Parent=MS.gene76380.t1
chr8.1 CDS 30003051 30004450 30003051 ID=cds.MS.gene76380.t1;Parent=MS.gene76380.t1
Gene Sequence

>MS.gene76380

ATGATAACAAATCAAGGTGATAAAGAAGACCAAACGAACACGTTCAACAAATATGCCTTTGCTTGTGCCATAGTTGCTTCAATGGTGTCCATCGTTTCTGGTTATGGTACGTAATTATCGCATTCTCTAATCTCTTCCACTTTTAATTTTATTTACTTTCGCTATTGTTTCACTATTCATTGTTCCAATAATTTTTTTTTCTTTTGTAGTTTTCACTAATTTGTTATCTCTACATGTCAAAATACATACTTCCTCCGATCACAATTATAAACGAAAAATTTTTAGGTTCATTTAACAATTAGTGTATGTGGTGACCCCATACCTTACTTACTCATCGAACCTAAAAAAAGTTTTTTTACTTATATTAATGACCGGAGGATTACTCAAGACAAAACGTTCAAGTAGCCACAAATATTTTTTTTGACTCAAACCACAAAAATCAGAAACAAAAACATGAATGTAACTAGGTATTGTTTTTACGTGGTTAATTGAACTTTATATGGTAAACTAAAATGAAAAAATTGAATAGAGGTTGTGTTTCATATCAAAACCTTTTCTTCAAGTTAATTTATTTTGAGGGATTCGATTTTTTTTTATTTACACAAATAAACTTATGATATTTCATTCATAATAATGGTAACAATAAAAGAAGGAACGAATCACTTGAAAGTTAATTTGAGTTTTTATTTTGAGGGATTCAAGTTTAGTGACCGGTTTCTTGATCCCCTTGTTGTTTAAGTGCATATTGAAAGAAATCTTTTATGCAACTAGTTTGCGTACTCATTGTACTCTTGATAACATATTTTGCTTATTCAAAAAAATCAAACTTTTTCTAGTTAACATCAATGTTTTTGTTGTTGTTGTAAGAACAAATTTTTTTGTTTTCGGTTTTCCCTAAGTGGGATCAAGTAACATACTCCCTCCTTCCCAAAAGAAGTTTCACGTTTGAAAAAAAATAATTTGTTTCAAAAATAATTTTTCCATTTAATTTTCAATGCAATTTTAATTTTTTTTTTAACTTACTCTCAAATTAATATTATGTATATTATTCTCAATTTATTTTGTTTACTTTGAATTTATGATGATTAGAATTTGAATACGCCAATAATTAATAATGATAATTTGGTAAAATTATTATTTTCACTCTTTCGTGTATCTTCTTTTCTTAATATATATGTGAAATAATCAAATACGATGCTTATTTAAGACGGGGGAGACTCTCACAAATAAAACACAGACATGGTAGACATATTTGACTCTAACTATTACACGTACATGATTAATTTCAGATACTGGTGTTATGAGTGGAGCAATGTTGTTCATAAAGGAAGATTTGGGAATCAGCGACACACAACAAGAGGTTCTAGCAGGAATCTTAAACCTATGTGCATTAGTAGGATCCTTAACAGCCGGAAGAACCTCCGATTACATTGGACGTCGCTACACAATCTTCTTAGCCTCAATATTGTTCATCCTTGGTGCAGGTCTAATGGGGTATGGTCCAAACTACGCGATTTTAATGGTTGGAAGATGTGTTTGTGGTGTAGGTGTTGGCTTTGCTCTTATGATAGCACCGGTTTATTCAGCTGAAATTTCTTCTGCTTCATCAAGAGGCTTCTTAACCTCTTTGCCTGAACTTTGTATTGGTATTGGAATCTTGTTAGGTTATATATCAAACTATTTTTTGGGAAAATATTTGAGTTTGAAACTTGGTTGGAGATTAATGCTTGGTATTGCAGCTTTGCCTTCATTTGTAGTAGCGTTTTGTATTTTAACAATGCCTGAGTCACCAAGGTGGTTGGTTATGCAAGGTCAATTAGGAAAAGCAAAAAAAGTTCTATTGCAAGTTTCAAACACAACGCAAGAAGCAGAACTTCGTCTCAAGGATATAAAAATCGCTGCTGGTTTAGACGAAAATTGTAACGATGAAATTGTGAAGTTACCTCAAAAGTCTCACCAAGGTGAAGGGGTTTGGAAAGAGTTGATTTTAAGACCAACGCCTTCTGTACGTTGGATGTTAATTGCTGCGGTTGGAATTCATTTTTTCGAACATGCAACCGGTATTGAAGCTGTTATGTTATATAGTCCAAGAATTTTCAAAAAAGCAGGTGTTACAAGTAAAGAAAAGCTTTTACTTGCAACTATTGGAGTAGGTTTAACAAAAATTGTTTTTCTTTTAATTGCTTTGTTTTTACTTGACAAACTTGGTAGAAGAAGACTTTTGCAAATTAGCACCGGAGGAATGATTATTGGGCTTACGCTATTGGGTCTTAGCTTGACTGTGGTAGATAAATCCAATGGAAACGTTTTATGGGCCTTGATCCTTAGCATCGTCGCAACGTATGCCTATGTTGCTTTCTTTAATATTGGGCTTGGGCCTATTACTTGGGTTTATAGTTCAGAGATATTTCCTTTGAAGTTGAGGGCACAAGGAGCAAGTATTGGAGTTGCTGTGAATAGGACCATGAATGCTGTTGTTTCCATGACTTTTATTTCAATCTATAAAGCTATCACAATAGGTGGAAGTTTTTTCATGTTTGCTGGTATATCTGTTTTAGCTTGGTTGTTTTTCTACTTTTTCCTTCCTGAAACTAAAGGCAAAGCTTTAGAGGAAATGGAGATGGTTTTTACCAAAAAATCAAGTGGTAAAAATGTGGCAATAGAAATGGATCCAATACAGAAGGTCTAG

Protein sequence

>MS.gene76380.t1

MITNQGDKEDQTNTFNKYAFACAIVASMVSIVSGYDTGVMSGAMLFIKEDLGISDTQQEVLAGILNLCALVGSLTAGRTSDYIGRRYTIFLASILFILGAGLMGYGPNYAILMVGRCVCGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYISNYFLGKYLSLKLGWRLMLGIAALPSFVVAFCILTMPESPRWLVMQGQLGKAKKVLLQVSNTTQEAELRLKDIKIAAGLDENCNDEIVKLPQKSHQGEGVWKELILRPTPSVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKEKLLLATIGVGLTKIVFLLIALFLLDKLGRRRLLQISTGGMIIGLTLLGLSLTVVDKSNGNVLWALILSIVATYAYVAFFNIGLGPITWVYSSEIFPLKLRAQGASIGVAVNRTMNAVVSMTFISIYKAITIGGSFFMFAGISVLAWLFFYFFLPETKGKALEEMEMVFTKKSSGKNVAIEMDPIQKV