Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32215.t1 | XP_003608257.1 | 98.8 | 512 | 6 | 0 | 1 | 512 | 1 | 512 | 1.90E-288 | 1001.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32215.t1 | P23586 | 81.6 | 515 | 95 | 0 | 1 | 515 | 1 | 515 | 3.9e-245 | 848.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32215.t1 | G7JRW3 | 98.8 | 512 | 6 | 0 | 1 | 512 | 1 | 512 | 1.4e-288 | 1001.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050463 | MS.gene32215 | 0.803082 | 4.13E-49 | -1.69E-46 |
MS.gene050496 | MS.gene32215 | -0.815881 | 7.37E-52 | -1.69E-46 |
MS.gene050528 | MS.gene32215 | 0.806322 | 8.70E-50 | -1.69E-46 |
MS.gene050868 | MS.gene32215 | -0.806122 | 9.59E-50 | -1.69E-46 |
MS.gene050871 | MS.gene32215 | -0.806016 | 1.01E-49 | -1.69E-46 |
MS.gene051044 | MS.gene32215 | 0.800582 | 1.35E-48 | -1.69E-46 |
MS.gene051946 | MS.gene32215 | 0.805491 | 1.30E-49 | -1.69E-46 |
MS.gene052566 | MS.gene32215 | 0.932765 | 5.21E-95 | -1.69E-46 |
MS.gene053561 | MS.gene32215 | 0.80597 | 1.03E-49 | -1.69E-46 |
MS.gene055776 | MS.gene32215 | -0.805565 | 1.26E-49 | -1.69E-46 |
MS.gene05589 | MS.gene32215 | -0.817132 | 3.86E-52 | -1.69E-46 |
MS.gene055942 | MS.gene32215 | 0.836983 | 6.80E-57 | -1.69E-46 |
MS.gene056504 | MS.gene32215 | -0.815065 | 1.12E-51 | -1.69E-46 |
MS.gene057014 | MS.gene32215 | 0.824019 | 1.01E-53 | -1.69E-46 |
MS.gene058171 | MS.gene32215 | 0.810437 | 1.15E-50 | -1.69E-46 |
MS.gene058175 | MS.gene32215 | 0.810632 | 1.05E-50 | -1.69E-46 |
MS.gene058628 | MS.gene32215 | 0.811937 | 5.45E-51 | -1.69E-46 |
MS.gene05884 | MS.gene32215 | 0.876009 | 1.96E-68 | -1.69E-46 |
MS.gene059022 | MS.gene32215 | -0.803727 | 3.04E-49 | -1.69E-46 |
MS.gene059701 | MS.gene32215 | 0.826298 | 2.93E-54 | -1.69E-46 |
MS.gene059865 | MS.gene32215 | -0.814303 | 1.65E-51 | -1.69E-46 |
MS.gene06012 | MS.gene32215 | 0.805444 | 1.33E-49 | -1.69E-46 |
MS.gene060703 | MS.gene32215 | -0.804135 | 2.50E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32215.t1 | MTR_4g091370 | 98.828 | 512 | 6 | 0 | 1 | 512 | 1 | 512 | 0.0 | 1030 |
MS.gene32215.t1 | MTR_4g090600 | 83.789 | 512 | 83 | 0 | 1 | 512 | 1 | 512 | 0.0 | 837 |
MS.gene32215.t1 | MTR_5g041550 | 68.031 | 513 | 163 | 1 | 1 | 512 | 1 | 513 | 0.0 | 696 |
MS.gene32215.t1 | MTR_3g093010 | 69.428 | 507 | 153 | 2 | 1 | 506 | 1 | 506 | 0.0 | 695 |
MS.gene32215.t1 | MTR_0009s0370 | 63.968 | 494 | 177 | 1 | 11 | 503 | 9 | 502 | 0.0 | 674 |
MS.gene32215.t1 | MTR_3g007910 | 64.427 | 506 | 144 | 4 | 1 | 502 | 1 | 474 | 0.0 | 650 |
MS.gene32215.t1 | MTR_5g082540 | 63.347 | 502 | 180 | 3 | 1 | 501 | 1 | 499 | 0.0 | 644 |
MS.gene32215.t1 | MTR_3g023480 | 61.972 | 497 | 188 | 1 | 14 | 509 | 12 | 508 | 0.0 | 640 |
MS.gene32215.t1 | MTR_1g038630 | 63.189 | 508 | 183 | 3 | 1 | 507 | 1 | 505 | 0.0 | 639 |
MS.gene32215.t1 | MTR_5g006070 | 59.802 | 505 | 198 | 4 | 14 | 515 | 13 | 515 | 0.0 | 615 |
MS.gene32215.t1 | MTR_3g008160 | 58.824 | 510 | 204 | 3 | 1 | 509 | 1 | 505 | 0.0 | 614 |
MS.gene32215.t1 | MTR_3g093060 | 64.523 | 451 | 158 | 1 | 50 | 498 | 1 | 451 | 0.0 | 598 |
MS.gene32215.t1 | MTR_1g038600 | 60.827 | 508 | 177 | 4 | 1 | 507 | 1 | 487 | 0.0 | 598 |
MS.gene32215.t1 | MTR_1g104750 | 55.090 | 501 | 222 | 2 | 1 | 500 | 1 | 499 | 0.0 | 589 |
MS.gene32215.t1 | MTR_1g104770 | 56.175 | 502 | 216 | 3 | 1 | 500 | 1 | 500 | 0.0 | 586 |
MS.gene32215.t1 | MTR_1g104780 | 58.300 | 506 | 205 | 5 | 1 | 504 | 1 | 502 | 0.0 | 570 |
MS.gene32215.t1 | MTR_0204s0020 | 55.761 | 486 | 210 | 3 | 14 | 499 | 12 | 492 | 0.0 | 568 |
MS.gene32215.t1 | MTR_5g006070 | 59.488 | 469 | 185 | 4 | 50 | 515 | 1 | 467 | 0.0 | 564 |
MS.gene32215.t1 | MTR_5g094760 | 56.600 | 500 | 208 | 4 | 1 | 496 | 1 | 495 | 0.0 | 561 |
MS.gene32215.t1 | MTR_7g091690 | 56.800 | 500 | 207 | 4 | 1 | 496 | 1 | 495 | 0.0 | 560 |
MS.gene32215.t1 | MTR_3g008160 | 59.002 | 461 | 183 | 3 | 50 | 509 | 1 | 456 | 0.0 | 559 |
MS.gene32215.t1 | MTR_0204s0020 | 55.144 | 486 | 210 | 4 | 14 | 499 | 12 | 489 | 0.0 | 558 |
MS.gene32215.t1 | MTR_3g008170 | 55.800 | 500 | 214 | 4 | 12 | 507 | 12 | 508 | 0.0 | 556 |
MS.gene32215.t1 | MTR_0204s0040 | 52.590 | 502 | 227 | 5 | 1 | 496 | 1 | 497 | 0.0 | 544 |
MS.gene32215.t1 | MTR_4g116770 | 52.590 | 502 | 227 | 5 | 1 | 496 | 197 | 693 | 0.0 | 544 |
MS.gene32215.t1 | MTR_4g116790 | 52.716 | 497 | 230 | 3 | 3 | 499 | 7 | 498 | 0.0 | 542 |
MS.gene32215.t1 | MTR_6g087040 | 53.021 | 513 | 233 | 4 | 1 | 509 | 1 | 509 | 0.0 | 535 |
MS.gene32215.t1 | MTR_6g088375 | 53.021 | 513 | 233 | 4 | 1 | 509 | 1 | 509 | 0.0 | 535 |
MS.gene32215.t1 | MTR_3g074390 | 52.263 | 486 | 226 | 5 | 17 | 500 | 22 | 503 | 0.0 | 526 |
MS.gene32215.t1 | MTR_8g102860 | 51.600 | 500 | 236 | 4 | 15 | 512 | 18 | 513 | 1.65e-179 | 515 |
MS.gene32215.t1 | MTR_3g074410 | 50.389 | 514 | 240 | 8 | 1 | 507 | 1 | 506 | 1.64e-176 | 508 |
MS.gene32215.t1 | MTR_3g074270 | 49.900 | 501 | 226 | 4 | 1 | 500 | 1 | 477 | 2.54e-172 | 496 |
MS.gene32215.t1 | MTR_8g102860 | 51.398 | 465 | 220 | 4 | 50 | 512 | 1 | 461 | 1.56e-163 | 473 |
MS.gene32215.t1 | MTR_4g116790 | 51.524 | 361 | 173 | 2 | 3 | 363 | 7 | 365 | 3.83e-134 | 395 |
MS.gene32215.t1 | MTR_3g074380 | 52.571 | 350 | 161 | 4 | 17 | 364 | 20 | 366 | 5.57e-125 | 371 |
MS.gene32215.t1 | MTR_3g074320 | 48.726 | 314 | 157 | 4 | 192 | 503 | 22 | 333 | 1.39e-104 | 317 |
MS.gene32215.t1 | MTR_3g074340 | 48.726 | 314 | 157 | 4 | 192 | 503 | 22 | 333 | 1.99e-104 | 317 |
MS.gene32215.t1 | MTR_3g074370 | 48.553 | 311 | 157 | 3 | 192 | 500 | 22 | 331 | 2.39e-104 | 317 |
MS.gene32215.t1 | MTR_3g074400 | 38.950 | 457 | 219 | 9 | 50 | 483 | 1 | 420 | 8.40e-95 | 295 |
MS.gene32215.t1 | MTR_5g096000 | 66.848 | 184 | 41 | 3 | 1 | 184 | 1 | 164 | 1.21e-67 | 221 |
MS.gene32215.t1 | MTR_5g096000 | 69.565 | 138 | 38 | 1 | 369 | 502 | 168 | 305 | 4.34e-53 | 182 |
MS.gene32215.t1 | MTR_0064s0040 | 71.523 | 151 | 31 | 1 | 2 | 152 | 3 | 141 | 4.05e-67 | 214 |
MS.gene32215.t1 | MTR_6g088450 | 28.571 | 476 | 298 | 9 | 18 | 479 | 53 | 500 | 1.28e-58 | 203 |
MS.gene32215.t1 | MTR_3g084110 | 29.228 | 479 | 308 | 10 | 20 | 492 | 25 | 478 | 7.44e-58 | 201 |
MS.gene32215.t1 | MTR_1g116650 | 29.697 | 495 | 299 | 12 | 20 | 503 | 75 | 531 | 3.53e-57 | 200 |
MS.gene32215.t1 | MTR_8g077890 | 30.754 | 504 | 303 | 12 | 11 | 492 | 6 | 485 | 3.78e-57 | 199 |
MS.gene32215.t1 | MTR_4g069500 | 27.485 | 513 | 316 | 11 | 27 | 514 | 34 | 515 | 5.37e-57 | 199 |
MS.gene32215.t1 | MTR_7g005910 | 29.293 | 495 | 313 | 11 | 20 | 503 | 30 | 498 | 3.77e-56 | 196 |
MS.gene32215.t1 | MTR_1g116660 | 29.350 | 477 | 308 | 10 | 21 | 492 | 33 | 485 | 3.08e-55 | 194 |
MS.gene32215.t1 | MTR_4g069500 | 28.859 | 447 | 282 | 9 | 93 | 514 | 30 | 465 | 1.38e-54 | 191 |
MS.gene32215.t1 | MTR_5g075300 | 29.193 | 483 | 297 | 10 | 28 | 489 | 24 | 482 | 4.77e-53 | 188 |
MS.gene32215.t1 | MTR_4g072030 | 27.561 | 537 | 323 | 13 | 22 | 535 | 26 | 519 | 7.87e-53 | 187 |
MS.gene32215.t1 | MTR_3g116240 | 26.962 | 497 | 316 | 9 | 12 | 486 | 17 | 488 | 1.41e-52 | 187 |
MS.gene32215.t1 | MTR_7g446340 | 27.379 | 515 | 322 | 12 | 14 | 515 | 45 | 520 | 1.82e-52 | 187 |
MS.gene32215.t1 | MTR_6g007340 | 27.379 | 515 | 322 | 12 | 14 | 515 | 45 | 520 | 1.82e-52 | 187 |
MS.gene32215.t1 | MTR_6g018790 | 28.370 | 497 | 303 | 11 | 11 | 492 | 87 | 545 | 2.21e-51 | 184 |
MS.gene32215.t1 | MTR_7g082270 | 28.033 | 478 | 297 | 10 | 17 | 487 | 63 | 500 | 2.13e-50 | 181 |
MS.gene32215.t1 | MTR_1g038620 | 55.696 | 158 | 53 | 1 | 204 | 361 | 50 | 190 | 1.23e-49 | 169 |
MS.gene32215.t1 | MTR_3g074310 | 56.604 | 159 | 61 | 2 | 1 | 152 | 1 | 158 | 7.32e-49 | 167 |
MS.gene32215.t1 | MTR_4g077740 | 29.661 | 472 | 289 | 11 | 31 | 486 | 53 | 497 | 1.01e-48 | 176 |
MS.gene32215.t1 | MTR_8g103500 | 26.488 | 521 | 339 | 10 | 10 | 513 | 5 | 498 | 5.10e-48 | 174 |
MS.gene32215.t1 | MTR_3g074330 | 55.975 | 159 | 62 | 2 | 1 | 152 | 1 | 158 | 6.09e-48 | 164 |
MS.gene32215.t1 | MTR_3g074360 | 55.975 | 159 | 62 | 2 | 1 | 152 | 1 | 158 | 6.09e-48 | 164 |
MS.gene32215.t1 | MTR_2g013310 | 27.040 | 429 | 287 | 8 | 89 | 503 | 26 | 442 | 7.52e-46 | 167 |
MS.gene32215.t1 | MTR_2g048720 | 34.125 | 337 | 197 | 6 | 21 | 352 | 24 | 340 | 9.54e-46 | 169 |
MS.gene32215.t1 | MTR_2g013310 | 25.963 | 493 | 316 | 12 | 27 | 503 | 56 | 515 | 1.39e-45 | 168 |
MS.gene32215.t1 | MTR_7g113970 | 28.330 | 473 | 292 | 10 | 21 | 486 | 60 | 492 | 4.41e-45 | 166 |
MS.gene32215.t1 | MTR_5g077580 | 26.876 | 573 | 289 | 18 | 21 | 497 | 24 | 562 | 1.12e-44 | 166 |
MS.gene32215.t1 | MTR_7g082270 | 28.605 | 423 | 256 | 9 | 17 | 433 | 63 | 445 | 2.47e-44 | 163 |
MS.gene32215.t1 | MTR_8g077300 | 28.358 | 469 | 300 | 10 | 22 | 486 | 38 | 474 | 6.99e-43 | 159 |
MS.gene32215.t1 | MTR_2g049020 | 31.563 | 339 | 206 | 5 | 21 | 352 | 24 | 343 | 5.39e-42 | 159 |
MS.gene32215.t1 | MTR_1g022315 | 26.829 | 410 | 289 | 4 | 83 | 490 | 89 | 489 | 8.47e-42 | 157 |
MS.gene32215.t1 | MTR_8g077310 | 26.638 | 473 | 301 | 10 | 23 | 486 | 47 | 482 | 1.53e-41 | 156 |
MS.gene32215.t1 | MTR_1g022315 | 26.817 | 399 | 281 | 4 | 94 | 490 | 1 | 390 | 3.04e-41 | 153 |
MS.gene32215.t1 | MTR_7g113960 | 27.833 | 406 | 274 | 5 | 83 | 486 | 67 | 455 | 4.21e-41 | 154 |
MS.gene32215.t1 | MTR_8g077310 | 28.358 | 402 | 262 | 8 | 94 | 486 | 1 | 385 | 8.25e-41 | 152 |
MS.gene32215.t1 | MTR_5g020270 | 26.601 | 406 | 286 | 5 | 83 | 486 | 90 | 485 | 2.17e-38 | 147 |
MS.gene32215.t1 | MTR_5g020270 | 27.820 | 399 | 268 | 7 | 94 | 486 | 1 | 385 | 6.69e-38 | 144 |
MS.gene32215.t1 | MTR_5g019870 | 27.830 | 424 | 272 | 10 | 92 | 489 | 64 | 479 | 1.36e-37 | 145 |
MS.gene32215.t1 | MTR_2g026160 | 28.448 | 348 | 210 | 7 | 20 | 352 | 24 | 347 | 4.66e-37 | 145 |
MS.gene32215.t1 | MTR_7g094450 | 26.859 | 417 | 272 | 9 | 80 | 486 | 77 | 470 | 6.14e-37 | 143 |
MS.gene32215.t1 | MTR_4g118610 | 28.398 | 412 | 277 | 7 | 83 | 491 | 92 | 488 | 1.63e-36 | 142 |
MS.gene32215.t1 | MTR_2g020710 | 27.073 | 410 | 273 | 8 | 84 | 486 | 1 | 391 | 3.71e-36 | 139 |
MS.gene32215.t1 | MTR_2g020710 | 26.923 | 416 | 278 | 8 | 83 | 491 | 89 | 485 | 5.59e-36 | 140 |
MS.gene32215.t1 | MTR_7g094110 | 26.601 | 406 | 281 | 6 | 83 | 486 | 82 | 472 | 2.38e-35 | 138 |
MS.gene32215.t1 | MTR_7g113970 | 29.851 | 335 | 201 | 7 | 21 | 352 | 60 | 363 | 3.89e-32 | 128 |
MS.gene32215.t1 | MTR_4g069500 | 26.567 | 335 | 210 | 9 | 205 | 514 | 3 | 326 | 5.60e-31 | 123 |
MS.gene32215.t1 | MTR_3g080240 | 24.468 | 470 | 315 | 12 | 28 | 491 | 98 | 533 | 6.42e-31 | 126 |
MS.gene32215.t1 | MTR_5g020270 | 24.816 | 407 | 271 | 7 | 83 | 486 | 90 | 464 | 1.54e-30 | 124 |
MS.gene32215.t1 | MTR_4g064820 | 28.729 | 362 | 226 | 7 | 23 | 367 | 96 | 442 | 1.81e-30 | 124 |
MS.gene32215.t1 | MTR_7g113960 | 30.515 | 272 | 177 | 4 | 83 | 352 | 67 | 328 | 9.62e-30 | 121 |
MS.gene32215.t1 | MTR_1g114280 | 43.137 | 153 | 67 | 3 | 347 | 499 | 21 | 153 | 3.43e-29 | 113 |
MS.gene32215.t1 | MTR_4g013205 | 23.649 | 444 | 319 | 6 | 47 | 486 | 42 | 469 | 1.76e-28 | 119 |
MS.gene32215.t1 | MTR_6g087910 | 25.063 | 395 | 282 | 5 | 93 | 486 | 102 | 483 | 2.80e-28 | 118 |
MS.gene32215.t1 | MTR_8g077310 | 25.862 | 348 | 227 | 6 | 23 | 368 | 47 | 365 | 3.38e-28 | 117 |
MS.gene32215.t1 | MTR_7g094110 | 24.631 | 406 | 269 | 6 | 83 | 486 | 82 | 452 | 3.66e-27 | 114 |
MS.gene32215.t1 | MTR_2g026140 | 26.706 | 337 | 200 | 8 | 29 | 352 | 30 | 332 | 1.51e-26 | 114 |
MS.gene32215.t1 | MTR_2g020710 | 26.686 | 341 | 224 | 8 | 83 | 416 | 89 | 410 | 7.21e-26 | 110 |
MS.gene32215.t1 | MTR_2g020710 | 26.765 | 340 | 223 | 8 | 83 | 415 | 89 | 409 | 8.88e-26 | 110 |
MS.gene32215.t1 | MTR_4g118610 | 28.190 | 337 | 224 | 7 | 83 | 416 | 92 | 413 | 1.72e-25 | 109 |
MS.gene32215.t1 | MTR_2g020710 | 28.000 | 275 | 177 | 7 | 83 | 350 | 89 | 349 | 4.82e-23 | 101 |
MS.gene32215.t1 | MTR_1g093115 | 69.841 | 63 | 18 | 1 | 161 | 222 | 1 | 63 | 7.97e-21 | 86.7 |
MS.gene32215.t1 | MTR_3g116060 | 31.088 | 193 | 123 | 4 | 74 | 259 | 31 | 220 | 8.59e-18 | 87.4 |
MS.gene32215.t1 | MTR_3g116060 | 23.767 | 223 | 151 | 4 | 272 | 483 | 497 | 711 | 2.65e-11 | 66.6 |
MS.gene32215.t1 | MTR_5g024740 | 26.383 | 235 | 151 | 5 | 23 | 255 | 4 | 218 | 5.37e-16 | 81.6 |
MS.gene32215.t1 | MTR_3g118530 | 32.353 | 170 | 113 | 2 | 91 | 259 | 54 | 222 | 1.96e-15 | 80.1 |
MS.gene32215.t1 | MTR_3g118530 | 23.767 | 223 | 151 | 4 | 272 | 483 | 507 | 721 | 6.16e-11 | 65.5 |
MS.gene32215.t1 | MTR_5g044910 | 27.168 | 173 | 124 | 2 | 84 | 255 | 47 | 218 | 2.95e-15 | 79.3 |
MS.gene32215.t1 | MTR_3g118530 | 32.353 | 170 | 113 | 2 | 91 | 259 | 54 | 222 | 4.17e-15 | 78.6 |
MS.gene32215.t1 | MTR_8g073100 | 26.446 | 242 | 142 | 6 | 23 | 255 | 4 | 218 | 7.79e-15 | 78.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32215.t1 | AT1G11260 | 81.553 | 515 | 95 | 0 | 1 | 515 | 1 | 515 | 0.0 | 854 |
MS.gene32215.t1 | AT4G21480 | 77.800 | 500 | 109 | 1 | 1 | 500 | 1 | 498 | 0.0 | 779 |
MS.gene32215.t1 | AT3G19940 | 65.073 | 481 | 166 | 2 | 19 | 499 | 21 | 499 | 0.0 | 651 |
MS.gene32215.t1 | AT1G50310 | 63.527 | 499 | 175 | 4 | 19 | 516 | 21 | 513 | 0.0 | 650 |
MS.gene32215.t1 | AT5G23270 | 63.817 | 503 | 179 | 3 | 1 | 501 | 1 | 502 | 0.0 | 642 |
MS.gene32215.t1 | AT3G19930 | 62.062 | 514 | 189 | 3 | 1 | 514 | 1 | 508 | 0.0 | 637 |
MS.gene32215.t1 | AT3G19930 | 62.062 | 514 | 189 | 3 | 1 | 514 | 1 | 508 | 0.0 | 637 |
MS.gene32215.t1 | AT5G26340 | 59.646 | 508 | 198 | 5 | 1 | 504 | 1 | 505 | 0.0 | 617 |
MS.gene32215.t1 | AT4G02050 | 56.287 | 501 | 210 | 4 | 1 | 497 | 1 | 496 | 0.0 | 568 |
MS.gene32215.t1 | AT4G02050 | 56.287 | 501 | 210 | 4 | 1 | 497 | 1 | 496 | 0.0 | 568 |
MS.gene32215.t1 | AT1G77210 | 52.268 | 507 | 234 | 4 | 1 | 503 | 1 | 503 | 0.0 | 533 |
MS.gene32215.t1 | AT1G77210 | 52.268 | 507 | 234 | 4 | 1 | 503 | 1 | 503 | 0.0 | 533 |
MS.gene32215.t1 | AT5G26250 | 52.705 | 499 | 230 | 4 | 6 | 503 | 5 | 498 | 0.0 | 520 |
MS.gene32215.t1 | AT1G34580 | 51.670 | 509 | 230 | 7 | 1 | 500 | 1 | 502 | 0.0 | 519 |
MS.gene32215.t1 | AT5G61520 | 54.158 | 493 | 215 | 4 | 17 | 503 | 18 | 505 | 2.35e-179 | 515 |
MS.gene32215.t1 | AT3G05960 | 52.419 | 496 | 230 | 5 | 15 | 509 | 13 | 503 | 7.08e-179 | 513 |
MS.gene32215.t1 | AT1G07340 | 50.800 | 500 | 239 | 5 | 1 | 498 | 1 | 495 | 7.55e-173 | 498 |
MS.gene32215.t1 | AT1G50310 | 63.388 | 366 | 127 | 4 | 152 | 516 | 11 | 370 | 1.47e-165 | 474 |
MS.gene32215.t1 | AT1G34580 | 51.096 | 456 | 214 | 5 | 50 | 500 | 1 | 452 | 4.99e-163 | 471 |
MS.gene32215.t1 | AT5G61520 | 53.362 | 461 | 204 | 4 | 49 | 503 | 2 | 457 | 4.22e-162 | 469 |
MS.gene32215.t1 | AT1G77210 | 52.691 | 353 | 162 | 3 | 152 | 503 | 6 | 354 | 3.24e-127 | 376 |
MS.gene32215.t1 | AT2G16130 | 30.632 | 506 | 299 | 11 | 12 | 492 | 14 | 492 | 2.19e-65 | 221 |
MS.gene32215.t1 | AT2G16120 | 30.435 | 506 | 300 | 11 | 12 | 492 | 14 | 492 | 9.26e-65 | 219 |
MS.gene32215.t1 | AT4G36670 | 30.382 | 497 | 302 | 10 | 14 | 490 | 8 | 480 | 3.34e-59 | 204 |
MS.gene32215.t1 | AT2G18480 | 30.882 | 476 | 278 | 12 | 37 | 489 | 36 | 483 | 9.33e-59 | 203 |
MS.gene32215.t1 | AT3G18830 | 28.926 | 484 | 300 | 8 | 27 | 490 | 40 | 499 | 1.26e-57 | 201 |
MS.gene32215.t1 | AT2G43330 | 29.622 | 476 | 301 | 10 | 27 | 494 | 35 | 484 | 1.48e-52 | 187 |
MS.gene32215.t1 | AT5G16150 | 28.452 | 478 | 303 | 9 | 12 | 486 | 98 | 539 | 2.31e-50 | 181 |
MS.gene32215.t1 | AT5G16150 | 28.452 | 478 | 303 | 9 | 12 | 486 | 98 | 539 | 2.31e-50 | 181 |
MS.gene32215.t1 | AT5G16150 | 28.452 | 478 | 303 | 9 | 12 | 486 | 98 | 539 | 2.31e-50 | 181 |
MS.gene32215.t1 | AT1G75220 | 30.254 | 433 | 274 | 7 | 75 | 490 | 66 | 487 | 1.12e-48 | 176 |
MS.gene32215.t1 | AT2G20780 | 27.311 | 476 | 311 | 8 | 22 | 490 | 54 | 501 | 2.79e-47 | 172 |
MS.gene32215.t1 | AT2G20780 | 29.024 | 410 | 276 | 6 | 88 | 490 | 42 | 443 | 7.36e-47 | 170 |
MS.gene32215.t1 | AT5G17010 | 28.964 | 473 | 291 | 11 | 31 | 486 | 55 | 499 | 1.66e-46 | 170 |
MS.gene32215.t1 | AT5G17010 | 28.964 | 473 | 291 | 11 | 31 | 486 | 55 | 499 | 1.66e-46 | 170 |
MS.gene32215.t1 | AT5G17010 | 28.964 | 473 | 291 | 11 | 31 | 486 | 55 | 499 | 1.66e-46 | 170 |
MS.gene32215.t1 | AT3G05155 | 26.625 | 477 | 311 | 10 | 13 | 487 | 17 | 456 | 6.58e-46 | 167 |
MS.gene32215.t1 | AT5G59250 | 30.453 | 486 | 286 | 13 | 23 | 486 | 98 | 553 | 9.46e-45 | 166 |
MS.gene32215.t1 | AT1G08930 | 28.431 | 408 | 271 | 7 | 83 | 486 | 98 | 488 | 9.17e-44 | 162 |
MS.gene32215.t1 | AT1G08930 | 28.431 | 408 | 271 | 7 | 83 | 486 | 98 | 488 | 9.17e-44 | 162 |
MS.gene32215.t1 | AT3G03090 | 29.175 | 473 | 290 | 13 | 31 | 486 | 55 | 499 | 1.04e-43 | 162 |
MS.gene32215.t1 | AT1G19450 | 30.254 | 433 | 274 | 7 | 75 | 490 | 67 | 488 | 1.67e-43 | 161 |
MS.gene32215.t1 | AT1G30220 | 30.663 | 362 | 219 | 8 | 4 | 352 | 3 | 345 | 1.47e-42 | 160 |
MS.gene32215.t1 | AT4G16480 | 31.653 | 357 | 215 | 6 | 20 | 366 | 24 | 361 | 4.14e-42 | 159 |
MS.gene32215.t1 | AT4G16480 | 31.653 | 357 | 215 | 6 | 20 | 366 | 24 | 361 | 4.14e-42 | 159 |
MS.gene32215.t1 | AT4G16480 | 31.653 | 357 | 215 | 6 | 20 | 366 | 24 | 361 | 4.14e-42 | 159 |
MS.gene32215.t1 | AT2G35740 | 30.641 | 359 | 216 | 7 | 21 | 367 | 24 | 361 | 1.08e-41 | 158 |
MS.gene32215.t1 | AT5G18840 | 29.245 | 424 | 278 | 10 | 68 | 486 | 69 | 475 | 1.51e-40 | 153 |
MS.gene32215.t1 | AT1G54730 | 27.922 | 462 | 292 | 9 | 29 | 486 | 38 | 462 | 7.87e-39 | 148 |
MS.gene32215.t1 | AT5G27360 | 26.230 | 488 | 315 | 10 | 12 | 493 | 24 | 472 | 8.24e-39 | 148 |
MS.gene32215.t1 | AT2G48020 | 27.536 | 414 | 271 | 6 | 83 | 488 | 68 | 460 | 1.75e-38 | 147 |
MS.gene32215.t1 | AT2G48020 | 27.536 | 414 | 271 | 6 | 83 | 488 | 68 | 460 | 1.75e-38 | 147 |
MS.gene32215.t1 | AT3G05160 | 29.176 | 425 | 274 | 10 | 65 | 486 | 2 | 402 | 2.22e-38 | 145 |
MS.gene32215.t1 | AT3G05160 | 29.176 | 425 | 274 | 10 | 65 | 486 | 2 | 402 | 2.22e-38 | 145 |
MS.gene32215.t1 | AT3G05165 | 28.571 | 406 | 273 | 7 | 83 | 486 | 70 | 460 | 2.49e-38 | 147 |
MS.gene32215.t1 | AT3G05165 | 28.571 | 406 | 273 | 7 | 83 | 486 | 70 | 460 | 2.49e-38 | 147 |
MS.gene32215.t1 | AT3G05165 | 28.571 | 406 | 273 | 7 | 83 | 486 | 70 | 460 | 2.49e-38 | 147 |
MS.gene32215.t1 | AT5G27360 | 26.230 | 488 | 315 | 10 | 12 | 493 | 72 | 520 | 2.50e-38 | 147 |
MS.gene32215.t1 | AT1G08890 | 26.290 | 407 | 283 | 5 | 83 | 487 | 67 | 458 | 3.13e-38 | 146 |
MS.gene32215.t1 | AT3G05160 | 29.176 | 425 | 274 | 10 | 65 | 486 | 51 | 451 | 4.52e-38 | 145 |
MS.gene32215.t1 | AT1G08900 | 26.601 | 406 | 281 | 6 | 83 | 486 | 23 | 413 | 5.09e-38 | 145 |
MS.gene32215.t1 | AT1G08900 | 26.601 | 406 | 281 | 6 | 83 | 486 | 57 | 447 | 8.90e-38 | 145 |
MS.gene32215.t1 | AT1G08900 | 26.601 | 406 | 281 | 6 | 83 | 486 | 65 | 455 | 9.91e-38 | 145 |
MS.gene32215.t1 | AT1G08900 | 26.601 | 406 | 281 | 6 | 83 | 486 | 65 | 455 | 9.91e-38 | 145 |
MS.gene32215.t1 | AT5G27350 | 26.337 | 486 | 317 | 11 | 12 | 493 | 20 | 468 | 2.47e-37 | 144 |
MS.gene32215.t1 | AT3G05400 | 25.052 | 479 | 320 | 10 | 11 | 486 | 14 | 456 | 3.08e-37 | 144 |
MS.gene32215.t1 | AT4G04760 | 28.058 | 417 | 278 | 7 | 83 | 493 | 12 | 412 | 3.27e-37 | 142 |
MS.gene32215.t1 | AT4G04760 | 28.058 | 417 | 278 | 7 | 83 | 493 | 71 | 471 | 6.59e-37 | 143 |
MS.gene32215.t1 | AT4G04750 | 26.988 | 415 | 282 | 8 | 83 | 492 | 76 | 474 | 1.23e-36 | 142 |
MS.gene32215.t1 | AT4G04750 | 26.988 | 415 | 282 | 8 | 83 | 492 | 76 | 474 | 1.23e-36 | 142 |
MS.gene32215.t1 | AT4G04750 | 27.184 | 412 | 279 | 8 | 83 | 489 | 120 | 515 | 1.28e-36 | 143 |
MS.gene32215.t1 | AT5G27360 | 28.165 | 387 | 253 | 8 | 113 | 493 | 1 | 368 | 3.30e-35 | 136 |
MS.gene32215.t1 | AT5G27360 | 28.165 | 387 | 253 | 8 | 113 | 493 | 1 | 368 | 3.30e-35 | 136 |
MS.gene32215.t1 | AT3G05165 | 27.937 | 383 | 259 | 7 | 83 | 463 | 70 | 437 | 1.31e-33 | 134 |
MS.gene32215.t1 | AT1G54730 | 26.304 | 460 | 281 | 10 | 29 | 486 | 38 | 441 | 2.25e-33 | 132 |
MS.gene32215.t1 | AT4G04760 | 27.660 | 423 | 269 | 9 | 83 | 493 | 71 | 468 | 5.04e-33 | 132 |
MS.gene32215.t1 | AT1G54730 | 27.381 | 420 | 264 | 9 | 29 | 444 | 38 | 420 | 6.67e-33 | 130 |
MS.gene32215.t1 | AT3G05150 | 27.586 | 435 | 270 | 12 | 83 | 499 | 75 | 482 | 7.23e-33 | 131 |
MS.gene32215.t1 | AT3G05400 | 24.217 | 479 | 304 | 12 | 11 | 486 | 14 | 436 | 8.76e-33 | 130 |
MS.gene32215.t1 | AT1G05030 | 25.486 | 463 | 307 | 11 | 29 | 486 | 85 | 514 | 1.69e-32 | 131 |
MS.gene32215.t1 | AT3G05165 | 28.736 | 348 | 231 | 7 | 83 | 428 | 70 | 402 | 2.35e-32 | 130 |
MS.gene32215.t1 | AT3G05165 | 28.736 | 348 | 231 | 7 | 83 | 428 | 70 | 402 | 2.35e-32 | 130 |
MS.gene32215.t1 | AT3G05150 | 27.685 | 419 | 261 | 11 | 83 | 486 | 75 | 466 | 2.46e-32 | 130 |
MS.gene32215.t1 | AT3G05150 | 27.685 | 419 | 261 | 11 | 83 | 486 | 75 | 466 | 2.46e-32 | 130 |
MS.gene32215.t1 | AT1G08920 | 25.304 | 411 | 280 | 9 | 83 | 486 | 72 | 462 | 2.79e-32 | 129 |
MS.gene32215.t1 | AT1G08900 | 26.359 | 368 | 254 | 6 | 83 | 448 | 65 | 417 | 9.29e-32 | 127 |
MS.gene32215.t1 | AT1G05030 | 25.990 | 404 | 280 | 9 | 88 | 486 | 73 | 462 | 2.68e-31 | 127 |
MS.gene32215.t1 | AT1G08920 | 25.182 | 413 | 285 | 9 | 83 | 486 | 72 | 469 | 7.53e-31 | 125 |
MS.gene32215.t1 | AT1G79820 | 27.114 | 402 | 267 | 9 | 90 | 486 | 107 | 487 | 1.24e-29 | 122 |
MS.gene32215.t1 | AT1G79820 | 27.114 | 402 | 267 | 9 | 90 | 486 | 107 | 487 | 1.24e-29 | 122 |
MS.gene32215.t1 | AT3G05155 | 25.513 | 341 | 221 | 7 | 13 | 352 | 17 | 325 | 1.41e-29 | 119 |
MS.gene32215.t1 | AT1G67300 | 24.169 | 451 | 324 | 8 | 47 | 493 | 57 | 493 | 2.29e-29 | 121 |
MS.gene32215.t1 | AT1G67300 | 24.169 | 451 | 324 | 8 | 47 | 493 | 57 | 493 | 2.29e-29 | 121 |
MS.gene32215.t1 | AT1G67300 | 24.612 | 451 | 323 | 9 | 47 | 493 | 57 | 494 | 4.11e-29 | 120 |
MS.gene32215.t1 | AT5G27360 | 25.659 | 417 | 265 | 10 | 12 | 422 | 24 | 401 | 4.83e-28 | 117 |
MS.gene32215.t1 | AT1G54730 | 27.041 | 392 | 245 | 9 | 29 | 416 | 38 | 392 | 7.16e-28 | 116 |
MS.gene32215.t1 | AT1G54730 | 27.041 | 392 | 245 | 9 | 29 | 416 | 38 | 392 | 7.16e-28 | 116 |
MS.gene32215.t1 | AT1G54730 | 25.598 | 418 | 253 | 10 | 29 | 444 | 38 | 399 | 1.36e-27 | 115 |
MS.gene32215.t1 | AT1G67300 | 24.103 | 390 | 279 | 7 | 47 | 433 | 57 | 432 | 1.70e-27 | 115 |
MS.gene32215.t1 | AT1G67300 | 24.103 | 390 | 279 | 7 | 47 | 433 | 57 | 432 | 1.70e-27 | 115 |
MS.gene32215.t1 | AT1G08920 | 25.201 | 373 | 252 | 9 | 83 | 448 | 72 | 424 | 3.66e-27 | 114 |
MS.gene32215.t1 | AT1G54730 | 28.221 | 326 | 202 | 6 | 29 | 352 | 38 | 333 | 4.84e-27 | 112 |
MS.gene32215.t1 | AT1G67300 | 23.958 | 384 | 275 | 7 | 47 | 427 | 57 | 426 | 6.70e-27 | 113 |
MS.gene32215.t1 | AT1G67300 | 23.958 | 384 | 275 | 7 | 47 | 427 | 57 | 426 | 6.70e-27 | 113 |
MS.gene32215.t1 | AT5G17010 | 26.526 | 475 | 240 | 15 | 31 | 486 | 52 | 436 | 7.53e-26 | 110 |
MS.gene32215.t1 | AT2G48020 | 28.866 | 291 | 182 | 6 | 83 | 364 | 68 | 342 | 1.33e-24 | 106 |
MS.gene32215.t1 | AT1G54730 | 26.752 | 314 | 200 | 6 | 29 | 340 | 38 | 323 | 2.23e-24 | 105 |
MS.gene32215.t1 | AT2G48020 | 29.137 | 278 | 173 | 5 | 83 | 352 | 68 | 329 | 2.54e-24 | 104 |
MS.gene32215.t1 | AT1G54730 | 27.393 | 303 | 191 | 5 | 29 | 329 | 38 | 313 | 2.84e-24 | 104 |
MS.gene32215.t1 | AT1G54730 | 27.393 | 303 | 191 | 5 | 29 | 329 | 38 | 313 | 2.84e-24 | 104 |
MS.gene32215.t1 | AT3G20460 | 22.660 | 406 | 297 | 6 | 83 | 486 | 93 | 483 | 2.07e-23 | 103 |
MS.gene32215.t1 | AT1G79820 | 25.862 | 348 | 233 | 8 | 90 | 433 | 107 | 433 | 8.27e-23 | 101 |
MS.gene32215.t1 | AT3G51490 | 26.778 | 239 | 153 | 5 | 23 | 259 | 4 | 222 | 6.13e-19 | 90.9 |
MS.gene32215.t1 | AT3G51490 | 23.767 | 223 | 143 | 4 | 272 | 483 | 500 | 706 | 5.37e-11 | 65.9 |
MS.gene32215.t1 | AT3G51490 | 26.778 | 239 | 153 | 5 | 23 | 259 | 4 | 222 | 6.64e-19 | 90.9 |
MS.gene32215.t1 | AT3G51490 | 25.112 | 223 | 148 | 3 | 272 | 483 | 500 | 714 | 1.70e-14 | 77.0 |
MS.gene32215.t1 | AT1G79820 | 24.439 | 401 | 231 | 8 | 90 | 486 | 107 | 439 | 5.10e-18 | 87.0 |
MS.gene32215.t1 | AT3G51490 | 30.588 | 170 | 116 | 2 | 91 | 259 | 4 | 172 | 5.89e-18 | 87.8 |
MS.gene32215.t1 | AT3G51490 | 25.112 | 223 | 148 | 3 | 272 | 483 | 450 | 664 | 1.68e-14 | 77.0 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.22e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.33e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.33e-16 | 81.6 |
MS.gene32215.t1 | AT4G35300 | 31.176 | 170 | 115 | 2 | 91 | 259 | 54 | 222 | 6.33e-16 | 81.6 |
MS.gene32215.t1 | AT1G20840 | 30.366 | 191 | 124 | 3 | 77 | 259 | 31 | 220 | 8.53e-15 | 77.8 |
MS.gene32215.t1 | AT1G20840 | 25.108 | 231 | 138 | 6 | 272 | 483 | 499 | 713 | 4.19e-11 | 66.2 |
MS.gene32215.t1 | AT1G20840 | 30.366 | 191 | 124 | 3 | 77 | 259 | 31 | 220 | 8.53e-15 | 77.8 |
MS.gene32215.t1 | AT1G20840 | 25.108 | 231 | 138 | 6 | 272 | 483 | 499 | 713 | 4.19e-11 | 66.2 |
Find 149 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTAATTCCATTGGGTTTA+AGG | 0.113122 | 4.4:-22573151 | MS.gene32215:CDS |
GCTACTTGTGTCTCAATTTA+TGG | 0.126446 | 4.4:-22573078 | MS.gene32215:CDS |
TCCCCATCCACCTTTGATTT+TGG | 0.146670 | 4.4:+22573500 | None:intergenic |
GCCATGGGTGGTTTGATCTT+TGG | 0.171803 | 4.4:-22575392 | MS.gene32215:CDS |
GGCTACGATATTGGAATTTC+AGG | 0.195679 | 4.4:-22575371 | MS.gene32215:intron |
CATTGCCTCTCTTGTTTCAT+TGG | 0.197158 | 4.4:-22572283 | MS.gene32215:CDS |
CGGTATCGGGTTTGCTAATC+AGG | 0.241591 | 4.4:-22574936 | MS.gene32215:intron |
ATTGGTATTCCTTTAGTTTC+AGG | 0.243147 | 4.4:+22572548 | None:intergenic |
GAGCACCACCTTCAAGAAAA+AGG | 0.248083 | 4.4:+22573031 | None:intergenic |
TTGATCTTTGGCTACGATAT+TGG | 0.249040 | 4.4:-22575380 | MS.gene32215:CDS |
CTTGTCGGTGCTCTTATAAA+TGG | 0.257332 | 4.4:-22575010 | MS.gene32215:CDS |
GTTTACATCGTCGTTGTATC+TGG | 0.267297 | 4.4:-22575119 | MS.gene32215:CDS |
TATAGAGGAGCATTGAATAT+TGG | 0.274205 | 4.4:-22573582 | MS.gene32215:CDS |
TTTGGAAATCACACCCCTTC+TGG | 0.289207 | 4.4:-22572508 | MS.gene32215:CDS |
TTGAAGAGATGGACAGAGTT+TGG | 0.293617 | 4.4:-22572526 | MS.gene32215:CDS |
GACAAAAGGAGTGAGGTTTC+CGG | 0.295840 | 4.4:+22575436 | None:intergenic |
ATAGAGGAGCATTGAATATT+GGG | 0.299523 | 4.4:-22573581 | MS.gene32215:CDS |
GCTGCAATTGGTGCCAAGTT+TGG | 0.313954 | 4.4:-22572872 | MS.gene32215:CDS |
CCATTCTTCCAACAATTTAC+CGG | 0.328002 | 4.4:-22573207 | MS.gene32215:CDS |
GAAATTGCAGTTCAAAATTA+CGG | 0.333654 | 4.4:-22572318 | MS.gene32215:intron |
CCACGTTCGATCATTGAGTT+AGG | 0.339334 | 4.4:+22573402 | None:intergenic |
TCTTGCTTGGATTCGGTATC+GGG | 0.343600 | 4.4:-22574949 | MS.gene32215:CDS |
ATGCTTTGTCACATGAAGTT+TGG | 0.347336 | 4.4:-22572632 | MS.gene32215:CDS |
CCTGTGCTATTTAATTCCAT+TGG | 0.361798 | 4.4:-22573159 | MS.gene32215:CDS |
ATGGGGTCCTCTTGGTTGGT+TGG | 0.362889 | 4.4:-22572759 | MS.gene32215:CDS |
AAATTGCAGTTCAAAATTAC+GGG | 0.363140 | 4.4:-22572317 | MS.gene32215:intron |
ACAAAAGGAGTGAGGTTTCC+GGG | 0.368593 | 4.4:+22575437 | None:intergenic |
CGCAGGATTTGCTTGGTCAT+GGG | 0.369280 | 4.4:-22572777 | MS.gene32215:CDS |
ATGGTTTCGCTAATCACGTT+TGG | 0.372925 | 4.4:-22574991 | MS.gene32215:CDS |
CTGTGCTATTTAATTCCATT+GGG | 0.374419 | 4.4:-22573158 | MS.gene32215:CDS |
CCGACCAAACCTACGAGTTA+TGG | 0.376402 | 4.4:+22575066 | None:intergenic |
GCTGGTGGTGGAATTCCCTT+TGG | 0.395386 | 4.4:-22575479 | MS.gene32215:CDS |
ATCGTGGGTCGGATCTTGCT+TGG | 0.396454 | 4.4:-22574962 | MS.gene32215:CDS |
ATCTTGCTTGGATTCGGTAT+CGG | 0.398394 | 4.4:-22574950 | MS.gene32215:CDS |
AATGCTCCTCTATATTTGTA+AGG | 0.400089 | 4.4:+22573591 | None:intergenic |
ATATAGACCTCAGCTTACTA+TGG | 0.404147 | 4.4:-22573241 | MS.gene32215:CDS |
TTTGTTGAACATGGTGATTA+TGG | 0.406973 | 4.4:-22572479 | MS.gene32215:CDS |
GGTGGTGGAATTCCCTTTGG+AGG | 0.410734 | 4.4:-22575476 | MS.gene32215:CDS |
GCTTGGTCATGGGGTCCTCT+TGG | 0.411054 | 4.4:-22572767 | MS.gene32215:CDS |
TCGCAGGATTTGCTTGGTCA+TGG | 0.411963 | 4.4:-22572778 | MS.gene32215:CDS |
CATTGATGCCGGTAAATTGT+TGG | 0.413750 | 4.4:+22573199 | None:intergenic |
ACTACTATAGCATACCATTC+TGG | 0.413767 | 4.4:+22572824 | None:intergenic |
GGCAGTACTGGTTTGTCGAT+TGG | 0.417895 | 4.4:+22575167 | None:intergenic |
GTTTCCACTTGTTCCAAACT+TGG | 0.421857 | 4.4:+22572859 | None:intergenic |
ATCATTGAGTTAGGGGTGTC+GGG | 0.424012 | 4.4:+22573411 | None:intergenic |
GGTCGGATCTTGCTTGGATT+CGG | 0.426902 | 4.4:-22574956 | MS.gene32215:CDS |
TGGGGATGGAGATTGAGTTT+AGG | 0.430290 | 4.4:-22573483 | MS.gene32215:CDS |
GGTCATGGGGTCCTCTTGGT+TGG | 0.430760 | 4.4:-22572763 | MS.gene32215:CDS |
CCAATGGTTATTATAAGTGC+TGG | 0.431216 | 4.4:+22573447 | None:intergenic |
TTTCAATTATCAATTACAAT+TGG | 0.439512 | 4.4:-22573558 | MS.gene32215:CDS |
AAGCTACCAACGAGGACAAA+AGG | 0.450172 | 4.4:+22575092 | None:intergenic |
GACTGTCGTATTGGCAGTAC+TGG | 0.451173 | 4.4:+22575155 | None:intergenic |
CTTCTTTGCCTTCTTTGTTG+TGG | 0.453778 | 4.4:-22572600 | MS.gene32215:CDS |
TCCACCATAACTCGTAGGTT+TGG | 0.457094 | 4.4:-22575070 | MS.gene32215:CDS |
GCCAAAATCAAAGGTGGATG+GGG | 0.463053 | 4.4:-22573501 | MS.gene32215:CDS |
CCGGTAAATTGTTGGAAGAA+TGG | 0.465015 | 4.4:+22573207 | None:intergenic |
GTTGCAGTAGCAGCTGCAAT+TGG | 0.468331 | 4.4:-22572884 | MS.gene32215:CDS |
GTGGTGGAATTCCCTTTGGA+GGG | 0.473891 | 4.4:-22575475 | MS.gene32215:CDS |
ACTCTGTCCATCTCTTCAAT+TGG | 0.474849 | 4.4:+22572530 | None:intergenic |
TTCATTTGCATTTACGTCGC+AGG | 0.476982 | 4.4:-22572794 | MS.gene32215:CDS |
TGCCAAAATCAAAGGTGGAT+GGG | 0.477589 | 4.4:-22573502 | MS.gene32215:CDS |
CACGTTCGATCATTGAGTTA+GGG | 0.482418 | 4.4:+22573403 | None:intergenic |
GGTGGAATTCCCTTTGGAGG+GGG | 0.487711 | 4.4:-22575473 | MS.gene32215:CDS |
TACCATTCTGGTAAATTACC+AGG | 0.488138 | 4.4:+22572836 | None:intergenic |
CTCTGCAACAAATTTCTCCA+AGG | 0.489471 | 4.4:+22573267 | None:intergenic |
TTGCCAAAATCAAAGGTGGA+TGG | 0.491873 | 4.4:-22573503 | MS.gene32215:CDS |
GCTCAACTTAAGAGAATTCG+CGG | 0.498698 | 4.4:-22573360 | MS.gene32215:CDS |
CAATTTATGGAGTTGATAAG+TGG | 0.498954 | 4.4:-22573065 | MS.gene32215:CDS |
TTTACGTCGCAGGATTTGCT+TGG | 0.499321 | 4.4:-22572784 | MS.gene32215:CDS |
ATTGAGTTTAGGTGGTGCTA+TGG | 0.503380 | 4.4:-22573472 | MS.gene32215:CDS |
CTTGGAGAAATTTGTTGCAG+AGG | 0.508868 | 4.4:-22573266 | MS.gene32215:CDS |
CTTATGTCGGCTGTCATCAC+CGG | 0.509517 | 4.4:-22573117 | MS.gene32215:CDS |
TGCTCAAATGCTTATATGCC+AGG | 0.509755 | 4.4:-22573013 | MS.gene32215:intron |
GCCATTGTACCTTTCTGAGA+TGG | 0.510459 | 4.4:-22573616 | MS.gene32215:CDS |
GGCAGCAACGATGCATGTTA+TGG | 0.510869 | 4.4:+22575412 | None:intergenic |
CAATGCAAGTGGAAAACCCT+TGG | 0.514516 | 4.4:-22573284 | MS.gene32215:CDS |
TCAATGTCTGACTGTCGTAT+TGG | 0.514995 | 4.4:+22575146 | None:intergenic |
TTCTTGTTGCCTGAAACTAA+AGG | 0.515302 | 4.4:-22572557 | MS.gene32215:CDS |
AGCTACCAACGAGGACAAAA+GGG | 0.523918 | 4.4:+22575093 | None:intergenic |
AGGAATACCAATTGAAGAGA+TGG | 0.524174 | 4.4:-22572537 | MS.gene32215:CDS |
ATGCATGTTATGGTGACAAA+AGG | 0.524617 | 4.4:+22575422 | None:intergenic |
TTTCTTCAGGAACGGATCCA+TGG | 0.525363 | 4.4:+22575225 | None:intergenic |
GAAGGTGAAAAGCATGTTGA+CGG | 0.530309 | 4.4:+22572679 | None:intergenic |
CCAGCACTTATAATAACCAT+TGG | 0.532867 | 4.4:-22573447 | MS.gene32215:CDS |
TCACGTTTGGATGTTGATCG+TGG | 0.535910 | 4.4:-22574978 | MS.gene32215:CDS |
TATGGCAATGGTGTTGAGAT+GGG | 0.537158 | 4.4:-22572461 | MS.gene32215:CDS |
GATCATTGAGTTAGGGGTGT+CGG | 0.537466 | 4.4:+22573410 | None:intergenic |
TCTGCAACAAATTTCTCCAA+GGG | 0.537563 | 4.4:+22573268 | None:intergenic |
ATGGCTCCTTACAAATATAG+AGG | 0.539000 | 4.4:-22573597 | MS.gene32215:CDS |
ATGGAGTTGATAAGTGGGGT+AGG | 0.540447 | 4.4:-22573059 | MS.gene32215:CDS |
ACCCTGGTAATTTACCAGAA+TGG | 0.542433 | 4.4:-22572838 | MS.gene32215:CDS |
AAACATAATAACATTGATGC+CGG | 0.544983 | 4.4:+22573188 | None:intergenic |
TGACATCACCACAACAAAGA+AGG | 0.548508 | 4.4:+22572592 | None:intergenic |
AACATGCATCGTTGCTGCCA+TGG | 0.550465 | 4.4:-22575408 | MS.gene32215:CDS |
GGACGATGCTTCACTTATGT+CGG | 0.550876 | 4.4:-22573130 | MS.gene32215:CDS |
CAATGGTTATTATAAGTGCT+GGG | 0.553448 | 4.4:+22573448 | None:intergenic |
AAATCAAAGGTGGATGGGGA+TGG | 0.555549 | 4.4:-22573497 | MS.gene32215:CDS |
TGGTCTAGATTTGTTGAACA+TGG | 0.559288 | 4.4:-22572488 | MS.gene32215:CDS |
TGACCTTGTGGCAGCTAGCG+AGG | 0.560276 | 4.4:-22573310 | MS.gene32215:CDS |
CACGTTTGGATGTTGATCGT+GGG | 0.561063 | 4.4:-22574977 | MS.gene32215:CDS |
AATTTATGGAGTTGATAAGT+GGG | 0.562763 | 4.4:-22573064 | MS.gene32215:CDS |
CCAATGGAATTAAATAGCAC+AGG | 0.563015 | 4.4:+22573159 | None:intergenic |
AATTACAATTGGTATACTTG+TGG | 0.564613 | 4.4:-22573547 | MS.gene32215:CDS |
GCAGGATTTGCTTGGTCATG+GGG | 0.565635 | 4.4:-22572776 | MS.gene32215:CDS |
CAACAAAGAAGGCAAAGAAG+AGG | 0.571537 | 4.4:+22572603 | None:intergenic |
GGTGCCAAGTTTGGAACAAG+TGG | 0.573526 | 4.4:-22572863 | MS.gene32215:CDS |
ATCAGGTGGTGTGACGTCCA+TGG | 0.573765 | 4.4:-22575242 | MS.gene32215:intron |
TTGGAAGAATGGTATCAATA+CGG | 0.578844 | 4.4:+22573218 | None:intergenic |
AAGTAATCCTCCGAAAAGCA+TGG | 0.579735 | 4.4:+22575036 | None:intergenic |
ACATGCATCGTTGCTGCCAT+GGG | 0.580412 | 4.4:-22575407 | MS.gene32215:CDS |
TTCAACAAATCTAGACCAGA+AGG | 0.580542 | 4.4:+22572493 | None:intergenic |
AGCATCGTCCTTAAACCCAA+TGG | 0.582163 | 4.4:+22573143 | None:intergenic |
GAAAACTTGTGCAACCAAGA+AGG | 0.583074 | 4.4:+22572661 | None:intergenic |
TTGAGTTAGGGGTGTCGGGA+AGG | 0.587345 | 4.4:+22573415 | None:intergenic |
CCATAACTCGTAGGTTTGGT+CGG | 0.590786 | 4.4:-22575066 | MS.gene32215:CDS |
CAATGGTGTTGAGATGGGAA+AGG | 0.592598 | 4.4:-22572456 | MS.gene32215:CDS |
TTATGGCAATGGTGTTGAGA+TGG | 0.594028 | 4.4:-22572462 | MS.gene32215:CDS |
TTTGGATGTTGATCGTGGGT+CGG | 0.595486 | 4.4:-22574973 | MS.gene32215:CDS |
AATGGTGTTGAGATGGGAAA+GGG | 0.595750 | 4.4:-22572455 | MS.gene32215:intron |
TGTAAGGAGCCATCTCAGAA+AGG | 0.603077 | 4.4:+22573607 | None:intergenic |
GGATGGAGATTGAGTTTAGG+TGG | 0.604126 | 4.4:-22573480 | MS.gene32215:CDS |
GGGAAGGACTAGTGATCCAA+TGG | 0.605523 | 4.4:+22573431 | None:intergenic |
ACGTTCGATCATTGAGTTAG+GGG | 0.605638 | 4.4:+22573404 | None:intergenic |
GCCAAAGATCAAACCACCCA+TGG | 0.605713 | 4.4:+22575391 | None:intergenic |
ACCATTCTGGTAAATTACCA+GGG | 0.609317 | 4.4:+22572837 | None:intergenic |
TGCATCGTTGCTGCCATGGG+TGG | 0.611537 | 4.4:-22575404 | MS.gene32215:CDS |
CAACAAATCTAGACCAGAAG+GGG | 0.613006 | 4.4:+22572495 | None:intergenic |
GAACATGGTGATTATGGCAA+TGG | 0.613403 | 4.4:-22572473 | MS.gene32215:CDS |
TGGTGGAATTCCCTTTGGAG+GGG | 0.616351 | 4.4:-22575474 | MS.gene32215:CDS |
GCTGCAGAACGAATCTCCAA+TGG | 0.618111 | 4.4:+22572719 | None:intergenic |
ATCGAACGTGGTGATCGCGA+TGG | 0.621882 | 4.4:-22573390 | MS.gene32215:CDS |
ACCAAACCTACGAGTTATGG+TGG | 0.623338 | 4.4:+22575069 | None:intergenic |
TTTGGAACAAGTGGAAACCC+TGG | 0.624639 | 4.4:-22572854 | MS.gene32215:CDS |
TAGCTTCCACCATAACTCGT+AGG | 0.634271 | 4.4:-22575075 | MS.gene32215:CDS |
AGCAACAACATTAACAACAC+CGG | 0.641199 | 4.4:+22573098 | None:intergenic |
GCCATCTCAGAAAGGTACAA+TGG | 0.642129 | 4.4:+22573615 | None:intergenic |
TCAACAAATCTAGACCAGAA+GGG | 0.644567 | 4.4:+22572494 | None:intergenic |
TTTGTCCAATGAAACAAGAG+AGG | 0.644722 | 4.4:+22572278 | None:intergenic |
AGGCCTCGCTAGCTGCCACA+AGG | 0.645118 | 4.4:+22573307 | None:intergenic |
CAAAAGGAGTGAGGTTTCCG+GGG | 0.647117 | 4.4:+22575438 | None:intergenic |
TAGCGAGGCCTCAATGCAAG+TGG | 0.648087 | 4.4:-22573295 | MS.gene32215:CDS |
ATTTATGGAGTTGATAAGTG+GGG | 0.652519 | 4.4:-22573063 | MS.gene32215:CDS |
CATTTATAAGAGCACCGACA+AGG | 0.656226 | 4.4:+22575011 | None:intergenic |
TTATGGTGACAAAAGGAGTG+AGG | 0.657034 | 4.4:+22575429 | None:intergenic |
TGAAGAGTTCAATGACCTTG+TGG | 0.670947 | 4.4:-22573322 | MS.gene32215:CDS |
CCTAACTCAATGATCGAACG+TGG | 0.682044 | 4.4:-22573402 | MS.gene32215:CDS |
CTAGGCACCAACCAACCAAG+AGG | 0.686614 | 4.4:+22572752 | None:intergenic |
AATACGGCCATAGTAAGCTG+AGG | 0.697256 | 4.4:+22573234 | None:intergenic |
TATGGTGGAAGCTACCAACG+AGG | 0.813495 | 4.4:+22575084 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATTAATCATTCTTAAT+TGG | - | chr4.4:22574038-22574057 | MS.gene32215:intron | 10.0% |
!! | ATTAATATTTAATATCAAGT+GGG | + | chr4.4:22574028-22574047 | None:intergenic | 10.0% |
!!! | TAATTTTTCATTATTTTAGA+AGG | + | chr4.4:22573036-22573055 | None:intergenic | 10.0% |
!!! | TATTTTTAATTTTTTCTTCA+TGG | - | chr4.4:22573163-22573182 | MS.gene32215:CDS | 10.0% |
!!! | TTTTTTGTTTTTGTTTTTTT+GGG | - | chr4.4:22572875-22572894 | MS.gene32215:CDS | 10.0% |
!! | ATAAATTAATGTACACTAAA+AGG | + | chr4.4:22572970-22572989 | None:intergenic | 15.0% |
!! | GATTAATATTTAATATCAAG+TGG | + | chr4.4:22574029-22574048 | None:intergenic | 15.0% |
!! | TTGTTTAAAAAAAGATATGT+AGG | + | chr4.4:22573961-22573980 | None:intergenic | 15.0% |
!! | TTTCAATTATCAATTACAAT+TGG | - | chr4.4:22574172-22574191 | MS.gene32215:intron | 15.0% |
!!! | AAACTTTGTTGATATTTTTA+TGG | - | chr4.4:22572417-22572436 | MS.gene32215:intron | 15.0% |
!!! | ATAGTATTCTTCTATTTTTT+TGG | + | chr4.4:22573293-22573312 | None:intergenic | 15.0% |
!!! | ATGAGTATTTTCATTATTTA+CGG | - | chr4.4:22573446-22573465 | MS.gene32215:CDS | 15.0% |
!!! | ATGCATTAAATTTTATGTAA+CGG | + | chr4.4:22573415-22573434 | None:intergenic | 15.0% |
!!! | CATGATTTTTTTAACTTTAT+TGG | - | chr4.4:22573193-22573212 | MS.gene32215:CDS | 15.0% |
!!! | CTTGTGTTTTTTTTTTTTTT+TGG | - | chr4.4:22574073-22574092 | MS.gene32215:intron | 15.0% |
!!! | GTTTTTTGTTTTTGTTTTTT+TGG | - | chr4.4:22572874-22572893 | MS.gene32215:CDS | 15.0% |
!!! | TCATTAGTAATTAGTTTTAT+TGG | - | chr4.4:22575346-22575365 | MS.gene32215:intron | 15.0% |
!!! | TGTATTTTTCAAAAAAATCA+TGG | + | chr4.4:22573135-22573154 | None:intergenic | 15.0% |
!!! | TTTTGTTTTTGTTATTGTTA+TGG | + | chr4.4:22573245-22573264 | None:intergenic | 15.0% |
!!! | TTTTTTTGGTTAAATTTTAC+AGG | - | chr4.4:22574087-22574106 | MS.gene32215:intron | 15.0% |
!! | AAACAGAATAACGTAAATTA+TGG | - | chr4.4:22572911-22572930 | MS.gene32215:intron | 20.0% |
!! | AACAGAATAACGTAAATTAT+GGG | - | chr4.4:22572912-22572931 | MS.gene32215:intron | 20.0% |
!! | TGATATAATATATCTCACTT+CGG | - | chr4.4:22573802-22573821 | MS.gene32215:intron | 20.0% |
!! | TTCATTACATTTGATATTTG+AGG | + | chr4.4:22575395-22575414 | None:intergenic | 20.0% |
!!! | TTTAACACAAATTGATAGTT+TGG | - | chr4.4:22573716-22573735 | MS.gene32215:intron | 20.0% |
!!! | TTTTTTTGGGTTTGTTTTAT+GGG | - | chr4.4:22572888-22572907 | MS.gene32215:intron | 20.0% |
! | AAAAAAGTAGTTCAACACAT+TGG | + | chr4.4:22574209-22574228 | None:intergenic | 25.0% |
! | AAAAGAACGAGAGAAATTAA+AGG | + | chr4.4:22572823-22572842 | None:intergenic | 25.0% |
! | AAACATAATAACATTGATGC+CGG | + | chr4.4:22574545-22574564 | None:intergenic | 25.0% |
! | AAATTGCAGTTCAAAATTAC+GGG | - | chr4.4:22575413-22575432 | MS.gene32215:CDS | 25.0% |
! | AATTACAATTGGTATACTTG+TGG | - | chr4.4:22574183-22574202 | MS.gene32215:intron | 25.0% |
! | ACCAAATTGTAACATTAAAG+TGG | + | chr4.4:22573525-22573544 | None:intergenic | 25.0% |
! | ACTGTAAAAAACGTTAATGA+AGG | + | chr4.4:22572994-22573013 | None:intergenic | 25.0% |
! | ATAATAGATTAGTGGAAGAA+TGG | + | chr4.4:22573744-22573763 | None:intergenic | 25.0% |
! | ATACAACACAGACAAATTAA+AGG | + | chr4.4:22573095-22573114 | None:intergenic | 25.0% |
! | ATATCACATGGAAAGAAAAT+AGG | + | chr4.4:22573788-22573807 | None:intergenic | 25.0% |
! | ATTTAATTCCATTGGGTTTA+AGG | - | chr4.4:22574579-22574598 | MS.gene32215:intron | 25.0% |
! | GAAATTGCAGTTCAAAATTA+CGG | - | chr4.4:22575412-22575431 | MS.gene32215:CDS | 25.0% |
! | GTGAGATATATTATATCACA+TGG | + | chr4.4:22573800-22573819 | None:intergenic | 25.0% |
! | TATCACATGGAAAGAAAATA+GGG | + | chr4.4:22573787-22573806 | None:intergenic | 25.0% |
! | TATTGGTAAACACTAACTAT+TGG | - | chr4.4:22575363-22575382 | MS.gene32215:intron | 25.0% |
! | TCCACTTTAATGTTACAATT+TGG | - | chr4.4:22573521-22573540 | MS.gene32215:CDS | 25.0% |
! | TCTATGTATGATAGTATTCT+CGG | - | chr4.4:22573574-22573593 | MS.gene32215:CDS | 25.0% |
! | TGGTAGTAATAATAGATTAG+TGG | + | chr4.4:22573752-22573771 | None:intergenic | 25.0% |
! | TGTTAGTGAAGAGAAAAATT+TGG | + | chr4.4:22573674-22573693 | None:intergenic | 25.0% |
!!! | AACGTTTGTTTTTGTTGAAT+GGG | - | chr4.4:22572460-22572479 | MS.gene32215:CDS | 25.0% |
!!! | AATTTATGGAGTTGATAAGT+GGG | - | chr4.4:22574666-22574685 | MS.gene32215:intron | 25.0% |
!!! | GTTTTTTTGGGTTTGTTTTA+TGG | - | chr4.4:22572887-22572906 | MS.gene32215:CDS | 25.0% |
!!! | TAACGTTTGTTTTTGTTGAA+TGG | - | chr4.4:22572459-22572478 | MS.gene32215:CDS | 25.0% |
!!! | TACTTTTTTGCCAAAATCAA+AGG | - | chr4.4:22574220-22574239 | MS.gene32215:intron | 25.0% |
!!! | TATTTTTGAATGCAAAGACT+TGG | + | chr4.4:22573854-22573873 | None:intergenic | 25.0% |
!!! | TGAGTCAGTATACTTTTTTT+TGG | + | chr4.4:22573382-22573401 | None:intergenic | 25.0% |
AAAAAAGATATGTAGGACCA+CGG | + | chr4.4:22573954-22573973 | None:intergenic | 30.0% | |
AAATAGGGACACAATAATTG+TGG | + | chr4.4:22573772-22573791 | None:intergenic | 30.0% | |
AATGCTCCTCTATATTTGTA+AGG | + | chr4.4:22574142-22574161 | None:intergenic | 30.0% | |
AGAGAAAAATTTGGCAAGAT+TGG | + | chr4.4:22573665-22573684 | None:intergenic | 30.0% | |
CAATGGTTATTATAAGTGCT+GGG | + | chr4.4:22574285-22574304 | None:intergenic | 30.0% | |
CCAATTTGAAGAGTTTCAAA+AGG | + | chr4.4:22573615-22573634 | None:intergenic | 30.0% | |
GGAAAAAATTTCTTCAGGAA+CGG | + | chr4.4:22572516-22572535 | None:intergenic | 30.0% | |
TCAACTTGTAACGTCTATAT+TGG | + | chr4.4:22573924-22573943 | None:intergenic | 30.0% | |
TCTTCAAATTGGACTTTGTT+TGG | - | chr4.4:22573623-22573642 | MS.gene32215:CDS | 30.0% | |
TTGGAAGAATGGTATCAATA+CGG | + | chr4.4:22574515-22574534 | None:intergenic | 30.0% | |
TTTGTTGAACATGGTGATTA+TGG | - | chr4.4:22575251-22575270 | MS.gene32215:intron | 30.0% | |
! | ATTGGTATTCCTTTAGTTTC+AGG | + | chr4.4:22575185-22575204 | None:intergenic | 30.0% |
! | CAATATGCATTGATGTGTAT+AGG | - | chr4.4:22574824-22574843 | MS.gene32215:intron | 30.0% |
!! | ATAGAGGAGCATTGAATATT+GGG | - | chr4.4:22574149-22574168 | MS.gene32215:intron | 30.0% |
!! | ATTTATGGAGTTGATAAGTG+GGG | - | chr4.4:22574667-22574686 | MS.gene32215:intron | 30.0% |
!! | CAATTTATGGAGTTGATAAG+TGG | - | chr4.4:22574665-22574684 | MS.gene32215:intron | 30.0% |
!! | CTGTGCTATTTAATTCCATT+GGG | - | chr4.4:22574572-22574591 | MS.gene32215:intron | 30.0% |
!! | TATAGAGGAGCATTGAATAT+TGG | - | chr4.4:22574148-22574167 | MS.gene32215:intron | 30.0% |
!!! | ACGTTTGTTTTTGTTGAATG+GGG | - | chr4.4:22572461-22572480 | MS.gene32215:CDS | 30.0% |
!!! | CCTTTTGAAACTCTTCAAAT+TGG | - | chr4.4:22573612-22573631 | MS.gene32215:CDS | 30.0% |
!!! | GTTCCTGAAGAAATTTTTTC+CGG | - | chr4.4:22572515-22572534 | MS.gene32215:CDS | 30.0% |
!!! | TTTTTTGCCAAAATCAAAGG+TGG | - | chr4.4:22574223-22574242 | MS.gene32215:intron | 30.0% |
AAAAAGATATGTAGGACCAC+GGG | + | chr4.4:22573953-22573972 | None:intergenic | 35.0% | |
ACCATTCTGGTAAATTACCA+GGG | + | chr4.4:22574896-22574915 | None:intergenic | 35.0% | |
ACTAACATGCTTGAATGTGA+TGG | - | chr4.4:22573687-22573706 | MS.gene32215:intron | 35.0% | |
ACTACTATAGCATACCATTC+TGG | + | chr4.4:22574909-22574928 | None:intergenic | 35.0% | |
ACTTGGAAAATTATGCAAGC+TGG | + | chr4.4:22573837-22573856 | None:intergenic | 35.0% | |
AGCAACAACATTAACAACAC+CGG | + | chr4.4:22574635-22574654 | None:intergenic | 35.0% | |
AGGAATACCAATTGAAGAGA+TGG | - | chr4.4:22575193-22575212 | MS.gene32215:CDS | 35.0% | |
ATATAGACCTCAGCTTACTA+TGG | - | chr4.4:22574489-22574508 | MS.gene32215:intron | 35.0% | |
ATCAAAGTTAAGACGTTACC+TGG | + | chr4.4:22574738-22574757 | None:intergenic | 35.0% | |
ATGCATGTTATGGTGACAAA+AGG | + | chr4.4:22572311-22572330 | None:intergenic | 35.0% | |
ATGCTTTGTCACATGAAGTT+TGG | - | chr4.4:22575098-22575117 | MS.gene32215:CDS | 35.0% | |
ATGGCTCCTTACAAATATAG+AGG | - | chr4.4:22574133-22574152 | MS.gene32215:intron | 35.0% | |
CCAATGGAATTAAATAGCAC+AGG | + | chr4.4:22574574-22574593 | None:intergenic | 35.0% | |
CCAATGGTTATTATAAGTGC+TGG | + | chr4.4:22574286-22574305 | None:intergenic | 35.0% | |
CCAGCACTTATAATAACCAT+TGG | - | chr4.4:22574283-22574302 | MS.gene32215:intron | 35.0% | |
CCATTCTTCCAACAATTTAC+CGG | - | chr4.4:22574523-22574542 | MS.gene32215:intron | 35.0% | |
GCTACTTGTGTCTCAATTTA+TGG | - | chr4.4:22574652-22574671 | MS.gene32215:intron | 35.0% | |
TACCATTCTGGTAAATTACC+AGG | + | chr4.4:22574897-22574916 | None:intergenic | 35.0% | |
TCAACAAATCTAGACCAGAA+GGG | + | chr4.4:22575239-22575258 | None:intergenic | 35.0% | |
TCCAATGGAAAAATCTCACT+AGG | + | chr4.4:22574999-22575018 | None:intergenic | 35.0% | |
TCTGCAACAAATTTCTCCAA+GGG | + | chr4.4:22574465-22574484 | None:intergenic | 35.0% | |
TTCAACAAATCTAGACCAGA+AGG | + | chr4.4:22575240-22575259 | None:intergenic | 35.0% | |
TTCTTGTTGCCTGAAACTAA+AGG | - | chr4.4:22575173-22575192 | MS.gene32215:CDS | 35.0% | |
TTGATCTTTGGCTACGATAT+TGG | - | chr4.4:22572350-22572369 | MS.gene32215:intron | 35.0% | |
TTTGTCCAATGAAACAAGAG+AGG | + | chr4.4:22575455-22575474 | None:intergenic | 35.0% | |
! | AATTGGACTTTGTTTGGTTG+CGG | - | chr4.4:22573629-22573648 | MS.gene32215:intron | 35.0% |
!! | CCTGTGCTATTTAATTCCAT+TGG | - | chr4.4:22574571-22574590 | MS.gene32215:intron | 35.0% |
!! | TGGTCTAGATTTGTTGAACA+TGG | - | chr4.4:22575242-22575261 | MS.gene32215:intron | 35.0% |
AAGTAATCCTCCGAAAAGCA+TGG | + | chr4.4:22572697-22572716 | None:intergenic | 40.0% | |
ACCCTGGTAATTTACCAGAA+TGG | - | chr4.4:22574892-22574911 | MS.gene32215:intron | 40.0% | |
ACGTTCGATCATTGAGTTAG+GGG | + | chr4.4:22574329-22574348 | None:intergenic | 40.0% | |
ACTCTGTCCATCTCTTCAAT+TGG | + | chr4.4:22575203-22575222 | None:intergenic | 40.0% | |
AGCACCACCTTCAAGAAAAA+GGG | + | chr4.4:22574701-22574720 | None:intergenic | 40.0% | |
ATGGTTTCGCTAATCACGTT+TGG | - | chr4.4:22572739-22572758 | MS.gene32215:CDS | 40.0% | |
CAACAAAGAAGGCAAAGAAG+AGG | + | chr4.4:22575130-22575149 | None:intergenic | 40.0% | |
CAACAAATCTAGACCAGAAG+GGG | + | chr4.4:22575238-22575257 | None:intergenic | 40.0% | |
CACGTTCGATCATTGAGTTA+GGG | + | chr4.4:22574330-22574349 | None:intergenic | 40.0% | |
CATTGATGCCGGTAAATTGT+TGG | + | chr4.4:22574534-22574553 | None:intergenic | 40.0% | |
CCGGTAAATTGTTGGAAGAA+TGG | + | chr4.4:22574526-22574545 | None:intergenic | 40.0% | |
CTCTGCAACAAATTTCTCCA+AGG | + | chr4.4:22574466-22574485 | None:intergenic | 40.0% | |
CTTCTTTGCCTTCTTTGTTG+TGG | - | chr4.4:22575130-22575149 | MS.gene32215:CDS | 40.0% | |
GAAAACTTGTGCAACCAAGA+AGG | + | chr4.4:22575072-22575091 | None:intergenic | 40.0% | |
GAAAATTATGCAAGCTGGTG+TGG | + | chr4.4:22573832-22573851 | None:intergenic | 40.0% | |
GAACATGGTGATTATGGCAA+TGG | - | chr4.4:22575257-22575276 | MS.gene32215:intron | 40.0% | |
GCTCAACTTAAGAGAATTCG+CGG | - | chr4.4:22574370-22574389 | MS.gene32215:intron | 40.0% | |
GGCTACGATATTGGAATTTC+AGG | - | chr4.4:22572359-22572378 | MS.gene32215:intron | 40.0% | |
GTTTACATCGTCGTTGTATC+TGG | - | chr4.4:22572611-22572630 | MS.gene32215:CDS | 40.0% | |
GTTTCCACTTGTTCCAAACT+TGG | + | chr4.4:22574874-22574893 | None:intergenic | 40.0% | |
TCAATGTCTGACTGTCGTAT+TGG | + | chr4.4:22572587-22572606 | None:intergenic | 40.0% | |
TGAAGAGTTCAATGACCTTG+TGG | - | chr4.4:22574408-22574427 | MS.gene32215:intron | 40.0% | |
TGACATCACCACAACAAAGA+AGG | + | chr4.4:22575141-22575160 | None:intergenic | 40.0% | |
TGCCAAAATCAAAGGTGGAT+GGG | - | chr4.4:22574228-22574247 | MS.gene32215:intron | 40.0% | |
TGCTCAAATGCTTATATGCC+AGG | - | chr4.4:22574717-22574736 | MS.gene32215:intron | 40.0% | |
TTATGGTGACAAAAGGAGTG+AGG | + | chr4.4:22572304-22572323 | None:intergenic | 40.0% | |
TTCATTTGCATTTACGTCGC+AGG | - | chr4.4:22574936-22574955 | MS.gene32215:intron | 40.0% | |
TTGAAGAGATGGACAGAGTT+TGG | - | chr4.4:22575204-22575223 | MS.gene32215:CDS | 40.0% | |
TTGCCAAAATCAAAGGTGGA+TGG | - | chr4.4:22574227-22574246 | MS.gene32215:intron | 40.0% | |
TTGTTGAATGGGGTTTGATC+AGG | - | chr4.4:22572471-22572490 | MS.gene32215:CDS | 40.0% | |
TTTGTTTGGTTGCGGTGTAA+AGG | - | chr4.4:22573637-22573656 | MS.gene32215:intron | 40.0% | |
! | AAACTTTCCATGCTTTTCGG+AGG | - | chr4.4:22572687-22572706 | MS.gene32215:CDS | 40.0% |
! | AATGGTGTTGAGATGGGAAA+GGG | - | chr4.4:22575275-22575294 | MS.gene32215:intron | 40.0% |
! | ATCTTGCTTGGATTCGGTAT+CGG | - | chr4.4:22572780-22572799 | MS.gene32215:CDS | 40.0% |
! | ATTGAGTTTAGGTGGTGCTA+TGG | - | chr4.4:22574258-22574277 | MS.gene32215:intron | 40.0% |
! | ATTGGTCCTCGTTCTTTTTC+CGG | + | chr4.4:22572548-22572567 | None:intergenic | 40.0% |
! | CAACATGCTTTTCACCTTCT+TGG | - | chr4.4:22575055-22575074 | MS.gene32215:CDS | 40.0% |
! | CATTGCCTCTCTTGTTTCAT+TGG | - | chr4.4:22575447-22575466 | MS.gene32215:CDS | 40.0% |
! | CGGAAACTTTCCATGCTTTT+CGG | - | chr4.4:22572684-22572703 | MS.gene32215:CDS | 40.0% |
! | CTTGTCGGTGCTCTTATAAA+TGG | - | chr4.4:22572720-22572739 | MS.gene32215:CDS | 40.0% |
! | GAAGGTGAAAAGCATGTTGA+CGG | + | chr4.4:22575054-22575073 | None:intergenic | 40.0% |
! | GCCTAGTGAGATTTTTCCAT+TGG | - | chr4.4:22574995-22575014 | MS.gene32215:CDS | 40.0% |
! | TATGGCAATGGTGTTGAGAT+GGG | - | chr4.4:22575269-22575288 | MS.gene32215:intron | 40.0% |
! | TTATGGCAATGGTGTTGAGA+TGG | - | chr4.4:22575268-22575287 | MS.gene32215:intron | 40.0% |
!! | CATTTATAAGAGCACCGACA+AGG | + | chr4.4:22572722-22572741 | None:intergenic | 40.0% |
!! | CTTGGAGAAATTTGTTGCAG+AGG | - | chr4.4:22574464-22574483 | MS.gene32215:intron | 40.0% |
!! | GGAGGATTACTTTTCCTTGT+CGG | - | chr4.4:22572705-22572724 | MS.gene32215:CDS | 40.0% |
!!! | CCTGAAGAAATTTTTTCCGG+CGG | - | chr4.4:22572518-22572537 | MS.gene32215:CDS | 40.0% |
AAATCAAAGGTGGATGGGGA+TGG | - | chr4.4:22574233-22574252 | MS.gene32215:intron | 45.0% | |
AAGCTACCAACGAGGACAAA+AGG | + | chr4.4:22572641-22572660 | None:intergenic | 45.0% | |
AATACGGCCATAGTAAGCTG+AGG | + | chr4.4:22574499-22574518 | None:intergenic | 45.0% | |
ACAAAAGGAGTGAGGTTTCC+GGG | + | chr4.4:22572296-22572315 | None:intergenic | 45.0% | |
ACCAAACCTACGAGTTATGG+TGG | + | chr4.4:22572664-22572683 | None:intergenic | 45.0% | |
AGCATCGTCCTTAAACCCAA+TGG | + | chr4.4:22574590-22574609 | None:intergenic | 45.0% | |
AGCTACCAACGAGGACAAAA+GGG | + | chr4.4:22572640-22572659 | None:intergenic | 45.0% | |
CAATGCAAGTGGAAAACCCT+TGG | - | chr4.4:22574446-22574465 | MS.gene32215:intron | 45.0% | |
CACGTTTGGATGTTGATCGT+GGG | - | chr4.4:22572753-22572772 | MS.gene32215:CDS | 45.0% | |
CCACGTTCGATCATTGAGTT+AGG | + | chr4.4:22574331-22574350 | None:intergenic | 45.0% | |
CCGCCGGAAAAAATTTCTTC+AGG | + | chr4.4:22572521-22572540 | None:intergenic | 45.0% | |
CCTAACTCAATGATCGAACG+TGG | - | chr4.4:22574328-22574347 | MS.gene32215:intron | 45.0% | |
GACAAAAGGAGTGAGGTTTC+CGG | + | chr4.4:22572297-22572316 | None:intergenic | 45.0% | |
GAGCACCACCTTCAAGAAAA+AGG | + | chr4.4:22574702-22574721 | None:intergenic | 45.0% | |
GCCAAAATCAAAGGTGGATG+GGG | - | chr4.4:22574229-22574248 | MS.gene32215:intron | 45.0% | |
GGACGATGCTTCACTTATGT+CGG | - | chr4.4:22574600-22574619 | MS.gene32215:intron | 45.0% | |
GGATGGAGATTGAGTTTAGG+TGG | - | chr4.4:22574250-22574269 | MS.gene32215:intron | 45.0% | |
TAGCTTCCACCATAACTCGT+AGG | - | chr4.4:22572655-22572674 | MS.gene32215:CDS | 45.0% | |
TCACGTTTGGATGTTGATCG+TGG | - | chr4.4:22572752-22572771 | MS.gene32215:CDS | 45.0% | |
TCCACCATAACTCGTAGGTT+TGG | - | chr4.4:22572660-22572679 | MS.gene32215:CDS | 45.0% | |
TGGGGATGGAGATTGAGTTT+AGG | - | chr4.4:22574247-22574266 | MS.gene32215:intron | 45.0% | |
TGTAAGGAGCCATCTCAGAA+AGG | + | chr4.4:22574126-22574145 | None:intergenic | 45.0% | |
TTGAATGGGGTTTGATCAGG+TGG | - | chr4.4:22572474-22572493 | MS.gene32215:CDS | 45.0% | |
TTTCTTCAGGAACGGATCCA+TGG | + | chr4.4:22572508-22572527 | None:intergenic | 45.0% | |
TTTGGAAATCACACCCCTTC+TGG | - | chr4.4:22575222-22575241 | MS.gene32215:CDS | 45.0% | |
TTTGGATGTTGATCGTGGGT+CGG | - | chr4.4:22572757-22572776 | MS.gene32215:CDS | 45.0% | |
! | AGAGCCCTTTTTCTTGAAGG+TGG | - | chr4.4:22574694-22574713 | MS.gene32215:intron | 45.0% |
! | AGGAGAGCCCTTTTTCTTGA+AGG | - | chr4.4:22574691-22574710 | MS.gene32215:intron | 45.0% |
! | AGGGTTTTCCACTTGCATTG+AGG | + | chr4.4:22574446-22574465 | None:intergenic | 45.0% |
! | CAATGGTGTTGAGATGGGAA+AGG | - | chr4.4:22575274-22575293 | MS.gene32215:intron | 45.0% |
! | CCATAACTCGTAGGTTTGGT+CGG | - | chr4.4:22572664-22572683 | MS.gene32215:CDS | 45.0% |
! | GATCATTGAGTTAGGGGTGT+CGG | + | chr4.4:22574323-22574342 | None:intergenic | 45.0% |
! | GCCATCTCAGAAAGGTACAA+TGG | + | chr4.4:22574118-22574137 | None:intergenic | 45.0% |
! | GCCATTGTACCTTTCTGAGA+TGG | - | chr4.4:22574114-22574133 | MS.gene32215:intron | 45.0% |
! | TACAAGTTGAGAAGAACCCG+TGG | - | chr4.4:22573934-22573953 | MS.gene32215:intron | 45.0% |
! | TCTTGCTTGGATTCGGTATC+GGG | - | chr4.4:22572781-22572800 | MS.gene32215:CDS | 45.0% |
! | TTTACGTCGCAGGATTTGCT+TGG | - | chr4.4:22574946-22574965 | MS.gene32215:CDS | 45.0% |
! | TTTGGAACAAGTGGAAACCC+TGG | - | chr4.4:22574876-22574895 | MS.gene32215:intron | 45.0% |
!! | ATCATTGAGTTAGGGGTGTC+GGG | + | chr4.4:22574322-22574341 | None:intergenic | 45.0% |
!! | ATGGAGTTGATAAGTGGGGT+AGG | - | chr4.4:22574671-22574690 | MS.gene32215:intron | 45.0% |
!! | TCCCCATCCACCTTTGATTT+TGG | + | chr4.4:22574233-22574252 | None:intergenic | 45.0% |
!!! | AATTTTTTCCGGCGGTGTAC+CGG | - | chr4.4:22572526-22572545 | MS.gene32215:CDS | 45.0% |
!! | AAAAAATTAAAAATAATTCA+AGG | + | chr4.4:22573158-22573177 | None:intergenic | 5.0% |
!!! | AATAATAATTATACATTTTT+AGG | + | chr4.4:22575305-22575324 | None:intergenic | 5.0% |
AACATGCATCGTTGCTGCCA+TGG | - | chr4.4:22572322-22572341 | MS.gene32215:intron | 50.0% | |
ACATGCATCGTTGCTGCCAT+GGG | - | chr4.4:22572323-22572342 | MS.gene32215:intron | 50.0% | |
CAAAAGGAGTGAGGTTTCCG+GGG | + | chr4.4:22572295-22572314 | None:intergenic | 50.0% | |
CCGACCAAACCTACGAGTTA+TGG | + | chr4.4:22572667-22572686 | None:intergenic | 50.0% | |
GCCAAAGATCAAACCACCCA+TGG | + | chr4.4:22572342-22572361 | None:intergenic | 50.0% | |
GCCATGGGTGGTTTGATCTT+TGG | - | chr4.4:22572338-22572357 | MS.gene32215:intron | 50.0% | |
GCTGCAGAACGAATCTCCAA+TGG | + | chr4.4:22575014-22575033 | None:intergenic | 50.0% | |
GGCAGCAACGATGCATGTTA+TGG | + | chr4.4:22572321-22572340 | None:intergenic | 50.0% | |
GGTCGGATCTTGCTTGGATT+CGG | - | chr4.4:22572774-22572793 | MS.gene32215:CDS | 50.0% | |
GGTGTACCGGAAAAAGAACG+AGG | - | chr4.4:22572539-22572558 | MS.gene32215:CDS | 50.0% | |
GTTGCAGTAGCAGCTGCAAT+TGG | - | chr4.4:22574846-22574865 | MS.gene32215:intron | 50.0% | |
TCTTTGTCACCCCCTCCAAA+GGG | + | chr4.4:22572269-22572288 | None:intergenic | 50.0% | |
! | CGCAGGATTTGCTTGGTCAT+GGG | - | chr4.4:22574953-22574972 | MS.gene32215:CDS | 50.0% |
! | CTTATGTCGGCTGTCATCAC+CGG | - | chr4.4:22574613-22574632 | MS.gene32215:intron | 50.0% |
! | GACTGTCGTATTGGCAGTAC+TGG | + | chr4.4:22572578-22572597 | None:intergenic | 50.0% |
! | GCAGGATTTGCTTGGTCATG+GGG | - | chr4.4:22574954-22574973 | MS.gene32215:CDS | 50.0% |
! | GGGAAGGACTAGTGATCCAA+TGG | + | chr4.4:22574302-22574321 | None:intergenic | 50.0% |
! | GGTGCCAAGTTTGGAACAAG+TGG | - | chr4.4:22574867-22574886 | MS.gene32215:intron | 50.0% |
! | GTGGTGGAATTCCCTTTGGA+GGG | - | chr4.4:22572255-22572274 | MS.gene32215:CDS | 50.0% |
! | TATGGTGGAAGCTACCAACG+AGG | + | chr4.4:22572649-22572668 | None:intergenic | 50.0% |
! | TCGCAGGATTTGCTTGGTCA+TGG | - | chr4.4:22574952-22574971 | MS.gene32215:CDS | 50.0% |
! | TGGTGGAATTCCCTTTGGAG+GGG | - | chr4.4:22572256-22572275 | MS.gene32215:CDS | 50.0% |
! | TTCTTTTTCCGGTACACCGC+CGG | + | chr4.4:22572537-22572556 | None:intergenic | 50.0% |
!! | CGGTATCGGGTTTGCTAATC+AGG | - | chr4.4:22572794-22572813 | MS.gene32215:CDS | 50.0% |
!! | GCTGCAATTGGTGCCAAGTT+TGG | - | chr4.4:22574858-22574877 | MS.gene32215:intron | 50.0% |
!! | GGCAGTACTGGTTTGTCGAT+TGG | + | chr4.4:22572566-22572585 | None:intergenic | 50.0% |
ATCAGGTGGTGTGACGTCCA+TGG | - | chr4.4:22572488-22572507 | MS.gene32215:CDS | 55.0% | |
ATCGAACGTGGTGATCGCGA+TGG | - | chr4.4:22574340-22574359 | MS.gene32215:intron | 55.0% | |
ATCGTGGGTCGGATCTTGCT+TGG | - | chr4.4:22572768-22572787 | MS.gene32215:CDS | 55.0% | |
ATGGGGTCCTCTTGGTTGGT+TGG | - | chr4.4:22574971-22574990 | MS.gene32215:CDS | 55.0% | |
CTAGGCACCAACCAACCAAG+AGG | + | chr4.4:22574981-22575000 | None:intergenic | 55.0% | |
CTCTTTGTCACCCCCTCCAA+AGG | + | chr4.4:22572270-22572289 | None:intergenic | 55.0% | |
TAGCGAGGCCTCAATGCAAG+TGG | - | chr4.4:22574435-22574454 | MS.gene32215:intron | 55.0% | |
! | GGTGGAATTCCCTTTGGAGG+GGG | - | chr4.4:22572257-22572276 | MS.gene32215:CDS | 55.0% |
!! | GCTGGTGGTGGAATTCCCTT+TGG | - | chr4.4:22572251-22572270 | MS.gene32215:CDS | 55.0% |
!! | GGTGGTGGAATTCCCTTTGG+AGG | - | chr4.4:22572254-22572273 | MS.gene32215:CDS | 55.0% |
!! | TTGAGTTAGGGGTGTCGGGA+AGG | + | chr4.4:22574318-22574337 | None:intergenic | 55.0% |
GCTTGGTCATGGGGTCCTCT+TGG | - | chr4.4:22574963-22574982 | MS.gene32215:CDS | 60.0% | |
GGTCATGGGGTCCTCTTGGT+TGG | - | chr4.4:22574967-22574986 | MS.gene32215:CDS | 60.0% | |
TGACCTTGTGGCAGCTAGCG+AGG | - | chr4.4:22574420-22574439 | MS.gene32215:intron | 60.0% | |
TGCATCGTTGCTGCCATGGG+TGG | - | chr4.4:22572326-22572345 | MS.gene32215:intron | 60.0% | |
! | GGCTGCCCTTTTGTCCTCGT+TGG | - | chr4.4:22572632-22572651 | MS.gene32215:CDS | 60.0% |
!! | GGGGGTGACAAAGAGTACCC+CGG | - | chr4.4:22572275-22572294 | MS.gene32215:CDS | 60.0% |
AGGCCTCGCTAGCTGCCACA+AGG | + | chr4.4:22574426-22574445 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 22572248 | 22575504 | 22572248 | ID=MS.gene32215 |
chr4.4 | mRNA | 22572248 | 22575504 | 22572248 | ID=MS.gene32215.t1;Parent=MS.gene32215 |
chr4.4 | exon | 22575372 | 22575504 | 22575372 | ID=MS.gene32215.t1.exon1;Parent=MS.gene32215.t1 |
chr4.4 | CDS | 22575372 | 22575504 | 22575372 | ID=cds.MS.gene32215.t1;Parent=MS.gene32215.t1 |
chr4.4 | exon | 22574937 | 22575259 | 22574937 | ID=MS.gene32215.t1.exon2;Parent=MS.gene32215.t1 |
chr4.4 | CDS | 22574937 | 22575259 | 22574937 | ID=cds.MS.gene32215.t1;Parent=MS.gene32215.t1 |
chr4.4 | exon | 22573014 | 22573643 | 22573014 | ID=MS.gene32215.t1.exon3;Parent=MS.gene32215.t1 |
chr4.4 | CDS | 22573014 | 22573643 | 22573014 | ID=cds.MS.gene32215.t1;Parent=MS.gene32215.t1 |
chr4.4 | exon | 22572456 | 22572906 | 22572456 | ID=MS.gene32215.t1.exon4;Parent=MS.gene32215.t1 |
chr4.4 | CDS | 22572456 | 22572906 | 22572456 | ID=cds.MS.gene32215.t1;Parent=MS.gene32215.t1 |
chr4.4 | exon | 22572248 | 22572330 | 22572248 | ID=MS.gene32215.t1.exon5;Parent=MS.gene32215.t1 |
chr4.4 | CDS | 22572248 | 22572330 | 22572248 | ID=cds.MS.gene32215.t1;Parent=MS.gene32215.t1 |
Gene Sequence |
Protein sequence |