Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052538.t1 | XP_003608196.1 | 98.1 | 514 | 10 | 0 | 1 | 514 | 1 | 514 | 5.00E-286 | 993 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052538.t1 | Q41144 | 77.9 | 515 | 111 | 2 | 1 | 512 | 1 | 515 | 5.7e-230 | 798.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052538.t1 | G7JQT1 | 98.1 | 514 | 10 | 0 | 1 | 514 | 1 | 514 | 3.6e-286 | 993.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052538 | MS.gene32188 | 0.808697 | 2.73E-50 | -1.69E-46 |
MS.gene052538 | MS.gene33740 | 0.819998 | 8.65E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052538.t1 | MTR_4g090600 | 98.054 | 514 | 10 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1021 |
MS.gene052538.t1 | MTR_4g091370 | 84.830 | 501 | 76 | 0 | 12 | 512 | 12 | 512 | 0.0 | 847 |
MS.gene052538.t1 | MTR_5g041550 | 67.913 | 508 | 162 | 1 | 6 | 512 | 6 | 513 | 0.0 | 685 |
MS.gene052538.t1 | MTR_3g093010 | 67.864 | 501 | 156 | 2 | 10 | 505 | 9 | 509 | 0.0 | 679 |
MS.gene052538.t1 | MTR_0009s0370 | 62.602 | 492 | 183 | 1 | 14 | 504 | 12 | 503 | 0.0 | 656 |
MS.gene052538.t1 | MTR_3g007910 | 62.851 | 498 | 150 | 3 | 10 | 503 | 9 | 475 | 0.0 | 635 |
MS.gene052538.t1 | MTR_1g038630 | 63.136 | 491 | 176 | 4 | 13 | 501 | 13 | 500 | 0.0 | 627 |
MS.gene052538.t1 | MTR_5g082540 | 61.277 | 501 | 185 | 4 | 11 | 505 | 11 | 508 | 0.0 | 624 |
MS.gene052538.t1 | MTR_3g023480 | 59.553 | 492 | 198 | 1 | 14 | 504 | 12 | 503 | 0.0 | 614 |
MS.gene052538.t1 | MTR_3g008160 | 56.667 | 510 | 212 | 3 | 1 | 509 | 1 | 502 | 0.0 | 592 |
MS.gene052538.t1 | MTR_5g006070 | 57.606 | 493 | 205 | 3 | 14 | 504 | 13 | 503 | 0.0 | 590 |
MS.gene052538.t1 | MTR_1g038600 | 60.816 | 490 | 171 | 5 | 13 | 501 | 13 | 482 | 0.0 | 586 |
MS.gene052538.t1 | MTR_3g093060 | 63.415 | 451 | 163 | 1 | 50 | 498 | 1 | 451 | 0.0 | 585 |
MS.gene052538.t1 | MTR_0204s0020 | 55.967 | 486 | 209 | 3 | 14 | 499 | 12 | 492 | 0.0 | 565 |
MS.gene052538.t1 | MTR_1g104750 | 52.716 | 497 | 232 | 2 | 5 | 500 | 5 | 499 | 0.0 | 558 |
MS.gene052538.t1 | MTR_1g104770 | 53.386 | 502 | 230 | 3 | 1 | 500 | 1 | 500 | 0.0 | 556 |
MS.gene052538.t1 | MTR_0204s0020 | 55.350 | 486 | 209 | 4 | 14 | 499 | 12 | 489 | 0.0 | 555 |
MS.gene052538.t1 | MTR_5g094760 | 56.352 | 488 | 208 | 3 | 15 | 502 | 19 | 501 | 0.0 | 543 |
MS.gene052538.t1 | MTR_7g091690 | 56.000 | 500 | 211 | 4 | 1 | 496 | 1 | 495 | 0.0 | 542 |
MS.gene052538.t1 | MTR_3g008170 | 54.990 | 511 | 220 | 5 | 3 | 506 | 2 | 509 | 0.0 | 541 |
MS.gene052538.t1 | MTR_5g006070 | 57.330 | 457 | 191 | 3 | 50 | 504 | 1 | 455 | 0.0 | 539 |
MS.gene052538.t1 | MTR_1g104780 | 54.728 | 497 | 221 | 3 | 8 | 502 | 7 | 501 | 0.0 | 536 |
MS.gene052538.t1 | MTR_3g008160 | 56.616 | 461 | 191 | 3 | 50 | 509 | 1 | 453 | 0.0 | 535 |
MS.gene052538.t1 | MTR_0204s0040 | 51.594 | 502 | 232 | 4 | 7 | 502 | 7 | 503 | 0.0 | 535 |
MS.gene052538.t1 | MTR_4g116770 | 51.491 | 503 | 233 | 4 | 7 | 503 | 203 | 700 | 0.0 | 533 |
MS.gene052538.t1 | MTR_4g116790 | 51.703 | 499 | 236 | 3 | 6 | 504 | 10 | 503 | 0.0 | 533 |
MS.gene052538.t1 | MTR_3g074390 | 50.797 | 502 | 241 | 5 | 1 | 500 | 6 | 503 | 2.19e-180 | 516 |
MS.gene052538.t1 | MTR_6g087040 | 52.130 | 493 | 231 | 4 | 15 | 506 | 18 | 506 | 3.21e-178 | 511 |
MS.gene052538.t1 | MTR_6g088375 | 52.130 | 493 | 231 | 4 | 15 | 506 | 18 | 506 | 3.21e-178 | 511 |
MS.gene052538.t1 | MTR_8g102860 | 50.898 | 501 | 238 | 4 | 15 | 514 | 18 | 511 | 4.10e-174 | 501 |
MS.gene052538.t1 | MTR_3g074410 | 50.203 | 492 | 238 | 6 | 18 | 506 | 20 | 507 | 7.55e-172 | 494 |
MS.gene052538.t1 | MTR_3g074270 | 47.505 | 501 | 238 | 4 | 1 | 500 | 1 | 477 | 4.86e-165 | 476 |
MS.gene052538.t1 | MTR_8g102860 | 50.644 | 466 | 222 | 4 | 50 | 514 | 1 | 459 | 2.37e-158 | 459 |
MS.gene052538.t1 | MTR_4g116790 | 50.279 | 358 | 176 | 2 | 6 | 363 | 10 | 365 | 3.47e-131 | 386 |
MS.gene052538.t1 | MTR_3g074380 | 51.576 | 349 | 164 | 4 | 17 | 363 | 20 | 365 | 8.62e-121 | 359 |
MS.gene052538.t1 | MTR_3g074320 | 48.589 | 319 | 161 | 3 | 192 | 508 | 22 | 339 | 1.78e-103 | 314 |
MS.gene052538.t1 | MTR_3g074340 | 48.276 | 319 | 162 | 3 | 192 | 508 | 22 | 339 | 6.57e-103 | 312 |
MS.gene052538.t1 | MTR_3g074370 | 47.962 | 319 | 163 | 3 | 192 | 508 | 22 | 339 | 1.27e-102 | 311 |
MS.gene052538.t1 | MTR_3g074400 | 38.612 | 461 | 215 | 10 | 50 | 483 | 1 | 420 | 1.24e-93 | 291 |
MS.gene052538.t1 | MTR_0064s0040 | 70.064 | 157 | 34 | 2 | 5 | 161 | 6 | 149 | 2.40e-67 | 214 |
MS.gene052538.t1 | MTR_6g088450 | 31.172 | 478 | 293 | 9 | 12 | 479 | 49 | 500 | 3.11e-67 | 225 |
MS.gene052538.t1 | MTR_5g096000 | 66.857 | 175 | 39 | 2 | 10 | 184 | 9 | 164 | 8.26e-66 | 215 |
MS.gene052538.t1 | MTR_5g096000 | 71.223 | 139 | 36 | 1 | 369 | 503 | 168 | 306 | 1.05e-53 | 184 |
MS.gene052538.t1 | MTR_4g069500 | 29.448 | 489 | 294 | 10 | 27 | 490 | 34 | 496 | 1.07e-64 | 219 |
MS.gene052538.t1 | MTR_4g069500 | 29.825 | 456 | 281 | 9 | 60 | 490 | 5 | 446 | 1.07e-61 | 209 |
MS.gene052538.t1 | MTR_8g077890 | 29.962 | 524 | 310 | 13 | 10 | 510 | 6 | 495 | 4.18e-60 | 206 |
MS.gene052538.t1 | MTR_3g084110 | 28.571 | 490 | 318 | 9 | 20 | 504 | 25 | 487 | 2.41e-59 | 204 |
MS.gene052538.t1 | MTR_4g072030 | 29.412 | 510 | 298 | 14 | 10 | 490 | 16 | 492 | 4.90e-59 | 204 |
MS.gene052538.t1 | MTR_5g075300 | 29.341 | 501 | 309 | 12 | 6 | 485 | 2 | 478 | 1.70e-57 | 199 |
MS.gene052538.t1 | MTR_3g116240 | 28.629 | 496 | 307 | 10 | 11 | 485 | 18 | 487 | 2.98e-57 | 199 |
MS.gene052538.t1 | MTR_8g103500 | 28.980 | 490 | 311 | 11 | 8 | 485 | 3 | 467 | 7.06e-55 | 192 |
MS.gene052538.t1 | MTR_1g116660 | 28.261 | 506 | 321 | 13 | 20 | 514 | 32 | 506 | 1.06e-54 | 192 |
MS.gene052538.t1 | MTR_1g116650 | 29.436 | 479 | 298 | 10 | 20 | 494 | 75 | 517 | 1.17e-54 | 192 |
MS.gene052538.t1 | MTR_7g082270 | 29.175 | 473 | 298 | 8 | 17 | 487 | 63 | 500 | 6.18e-54 | 190 |
MS.gene052538.t1 | MTR_7g446340 | 27.146 | 501 | 316 | 12 | 22 | 511 | 54 | 516 | 1.48e-53 | 189 |
MS.gene052538.t1 | MTR_6g007340 | 27.146 | 501 | 316 | 12 | 22 | 511 | 54 | 516 | 1.48e-53 | 189 |
MS.gene052538.t1 | MTR_7g005910 | 28.542 | 480 | 313 | 10 | 20 | 494 | 30 | 484 | 1.02e-52 | 186 |
MS.gene052538.t1 | MTR_6g018790 | 29.278 | 485 | 300 | 9 | 6 | 487 | 96 | 540 | 4.67e-52 | 186 |
MS.gene052538.t1 | MTR_2g013310 | 26.205 | 477 | 307 | 10 | 22 | 485 | 52 | 496 | 3.96e-51 | 182 |
MS.gene052538.t1 | MTR_2g013310 | 28.293 | 410 | 269 | 7 | 89 | 485 | 26 | 423 | 1.21e-50 | 179 |
MS.gene052538.t1 | MTR_7g082270 | 30.622 | 418 | 254 | 7 | 17 | 433 | 63 | 445 | 2.98e-49 | 176 |
MS.gene052538.t1 | MTR_4g077740 | 29.787 | 470 | 289 | 11 | 31 | 485 | 53 | 496 | 1.07e-47 | 172 |
MS.gene052538.t1 | MTR_2g048720 | 33.828 | 337 | 198 | 6 | 21 | 352 | 24 | 340 | 1.76e-47 | 173 |
MS.gene052538.t1 | MTR_3g074310 | 56.051 | 157 | 57 | 3 | 3 | 152 | 7 | 158 | 1.04e-46 | 160 |
MS.gene052538.t1 | MTR_1g038620 | 51.266 | 158 | 60 | 1 | 204 | 361 | 50 | 190 | 4.37e-46 | 159 |
MS.gene052538.t1 | MTR_7g113970 | 27.813 | 471 | 295 | 9 | 21 | 485 | 60 | 491 | 8.86e-46 | 167 |
MS.gene052538.t1 | MTR_3g074330 | 55.414 | 157 | 58 | 3 | 3 | 152 | 7 | 158 | 1.08e-45 | 158 |
MS.gene052538.t1 | MTR_3g074360 | 55.414 | 157 | 58 | 3 | 3 | 152 | 7 | 158 | 1.08e-45 | 158 |
MS.gene052538.t1 | MTR_5g077580 | 26.773 | 564 | 281 | 15 | 20 | 488 | 23 | 549 | 6.25e-45 | 166 |
MS.gene052538.t1 | MTR_2g049020 | 31.176 | 340 | 208 | 5 | 20 | 352 | 23 | 343 | 1.43e-43 | 163 |
MS.gene052538.t1 | MTR_8g077300 | 27.778 | 468 | 302 | 10 | 22 | 485 | 38 | 473 | 2.44e-42 | 157 |
MS.gene052538.t1 | MTR_7g113960 | 29.238 | 407 | 265 | 8 | 83 | 485 | 67 | 454 | 9.60e-42 | 156 |
MS.gene052538.t1 | MTR_1g022315 | 27.317 | 410 | 287 | 4 | 83 | 490 | 89 | 489 | 1.82e-41 | 155 |
MS.gene052538.t1 | MTR_5g019870 | 28.802 | 434 | 282 | 9 | 78 | 489 | 51 | 479 | 3.59e-41 | 154 |
MS.gene052538.t1 | MTR_1g022315 | 27.318 | 399 | 279 | 4 | 94 | 490 | 1 | 390 | 6.22e-41 | 152 |
MS.gene052538.t1 | MTR_2g026160 | 29.752 | 363 | 213 | 8 | 20 | 369 | 24 | 357 | 1.28e-40 | 154 |
MS.gene052538.t1 | MTR_8g077310 | 26.716 | 408 | 281 | 6 | 83 | 485 | 87 | 481 | 1.48e-39 | 150 |
MS.gene052538.t1 | MTR_8g077310 | 26.700 | 397 | 273 | 6 | 94 | 485 | 1 | 384 | 6.25e-39 | 146 |
MS.gene052538.t1 | MTR_5g020270 | 27.039 | 466 | 306 | 8 | 23 | 485 | 50 | 484 | 9.73e-39 | 148 |
MS.gene052538.t1 | MTR_7g094450 | 27.166 | 427 | 280 | 8 | 64 | 485 | 69 | 469 | 2.32e-38 | 146 |
MS.gene052538.t1 | MTR_5g020270 | 28.354 | 395 | 269 | 6 | 94 | 485 | 1 | 384 | 4.27e-38 | 144 |
MS.gene052538.t1 | MTR_2g020710 | 28.079 | 406 | 272 | 9 | 84 | 485 | 1 | 390 | 2.13e-37 | 142 |
MS.gene052538.t1 | MTR_2g020710 | 26.458 | 480 | 313 | 11 | 10 | 485 | 36 | 479 | 2.59e-37 | 144 |
MS.gene052538.t1 | MTR_7g094110 | 26.887 | 424 | 285 | 7 | 64 | 485 | 71 | 471 | 1.57e-36 | 141 |
MS.gene052538.t1 | MTR_4g118610 | 27.197 | 478 | 310 | 10 | 11 | 485 | 40 | 482 | 1.62e-36 | 141 |
MS.gene052538.t1 | MTR_4g069500 | 28.617 | 311 | 191 | 8 | 205 | 490 | 3 | 307 | 3.65e-35 | 134 |
MS.gene052538.t1 | MTR_5g020270 | 25.482 | 467 | 291 | 9 | 23 | 485 | 50 | 463 | 8.07e-34 | 134 |
MS.gene052538.t1 | MTR_3g080240 | 24.893 | 466 | 310 | 11 | 28 | 487 | 98 | 529 | 3.81e-33 | 132 |
MS.gene052538.t1 | MTR_7g113970 | 28.955 | 335 | 204 | 7 | 21 | 352 | 60 | 363 | 1.13e-32 | 129 |
MS.gene052538.t1 | MTR_7g113960 | 30.403 | 273 | 176 | 5 | 83 | 352 | 67 | 328 | 3.04e-30 | 122 |
MS.gene052538.t1 | MTR_6g087910 | 25.000 | 460 | 311 | 8 | 28 | 485 | 55 | 482 | 3.98e-29 | 120 |
MS.gene052538.t1 | MTR_1g114280 | 44.444 | 153 | 65 | 3 | 347 | 499 | 21 | 153 | 1.44e-28 | 111 |
MS.gene052538.t1 | MTR_2g026140 | 28.249 | 354 | 200 | 10 | 29 | 369 | 30 | 342 | 2.49e-28 | 119 |
MS.gene052538.t1 | MTR_4g064820 | 28.152 | 341 | 213 | 7 | 31 | 354 | 104 | 429 | 3.03e-28 | 118 |
MS.gene052538.t1 | MTR_4g013205 | 22.511 | 462 | 320 | 8 | 28 | 485 | 41 | 468 | 3.40e-28 | 117 |
MS.gene052538.t1 | MTR_7g094110 | 25.000 | 424 | 273 | 8 | 64 | 485 | 71 | 451 | 1.18e-27 | 115 |
MS.gene052538.t1 | MTR_8g077310 | 27.941 | 272 | 185 | 4 | 83 | 352 | 87 | 349 | 1.45e-27 | 114 |
MS.gene052538.t1 | MTR_2g020710 | 25.791 | 411 | 265 | 11 | 10 | 416 | 36 | 410 | 1.71e-27 | 115 |
MS.gene052538.t1 | MTR_2g020710 | 25.854 | 410 | 264 | 11 | 10 | 415 | 36 | 409 | 2.50e-27 | 114 |
MS.gene052538.t1 | MTR_4g118610 | 26.650 | 409 | 262 | 10 | 11 | 416 | 40 | 413 | 3.72e-26 | 111 |
MS.gene052538.t1 | MTR_2g020710 | 28.044 | 271 | 182 | 6 | 83 | 350 | 89 | 349 | 5.70e-25 | 106 |
MS.gene052538.t1 | MTR_1g093115 | 66.667 | 63 | 20 | 1 | 161 | 222 | 1 | 63 | 6.16e-19 | 81.3 |
MS.gene052538.t1 | MTR_3g116060 | 31.765 | 170 | 114 | 2 | 91 | 259 | 52 | 220 | 1.83e-17 | 86.3 |
MS.gene052538.t1 | MTR_5g024740 | 25.957 | 235 | 152 | 5 | 23 | 255 | 4 | 218 | 4.00e-16 | 82.0 |
MS.gene052538.t1 | MTR_5g044910 | 24.681 | 235 | 155 | 5 | 23 | 255 | 4 | 218 | 4.42e-15 | 78.6 |
MS.gene052538.t1 | MTR_8g073100 | 27.273 | 242 | 140 | 7 | 23 | 255 | 4 | 218 | 7.69e-15 | 77.8 |
MS.gene052538.t1 | MTR_3g118530 | 29.730 | 185 | 128 | 2 | 76 | 259 | 39 | 222 | 1.55e-14 | 77.0 |
MS.gene052538.t1 | MTR_3g118530 | 29.730 | 185 | 128 | 2 | 76 | 259 | 39 | 222 | 5.20e-14 | 75.1 |
MS.gene052538.t1 | MTR_6g006260 | 33.884 | 121 | 73 | 3 | 239 | 352 | 32 | 152 | 2.41e-11 | 64.3 |
MS.gene052538.t1 | MTR_6g006260 | 33.884 | 121 | 73 | 3 | 239 | 352 | 33 | 153 | 5.09e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052538.t1 | AT1G11260 | 75.486 | 514 | 126 | 0 | 1 | 514 | 1 | 514 | 0.0 | 793 |
MS.gene052538.t1 | AT4G21480 | 75.000 | 500 | 123 | 1 | 1 | 500 | 1 | 498 | 0.0 | 746 |
MS.gene052538.t1 | AT3G19940 | 62.500 | 496 | 184 | 2 | 19 | 514 | 21 | 514 | 0.0 | 641 |
MS.gene052538.t1 | AT1G50310 | 63.580 | 486 | 174 | 3 | 19 | 503 | 21 | 504 | 0.0 | 634 |
MS.gene052538.t1 | AT5G23270 | 61.972 | 497 | 187 | 2 | 6 | 501 | 7 | 502 | 0.0 | 626 |
MS.gene052538.t1 | AT3G19930 | 61.818 | 495 | 187 | 2 | 13 | 507 | 13 | 505 | 0.0 | 621 |
MS.gene052538.t1 | AT3G19930 | 61.818 | 495 | 187 | 2 | 13 | 507 | 13 | 505 | 0.0 | 621 |
MS.gene052538.t1 | AT5G26340 | 54.932 | 517 | 227 | 4 | 1 | 514 | 1 | 514 | 0.0 | 581 |
MS.gene052538.t1 | AT4G02050 | 56.275 | 494 | 208 | 4 | 7 | 497 | 8 | 496 | 0.0 | 555 |
MS.gene052538.t1 | AT4G02050 | 56.275 | 494 | 208 | 4 | 7 | 497 | 8 | 496 | 0.0 | 555 |
MS.gene052538.t1 | AT5G61520 | 54.175 | 491 | 214 | 4 | 17 | 501 | 18 | 503 | 6.80e-178 | 510 |
MS.gene052538.t1 | AT5G26250 | 51.089 | 505 | 241 | 4 | 3 | 506 | 2 | 501 | 3.93e-177 | 508 |
MS.gene052538.t1 | AT1G34580 | 51.738 | 489 | 227 | 5 | 17 | 500 | 18 | 502 | 3.95e-176 | 505 |
MS.gene052538.t1 | AT1G77210 | 50.719 | 487 | 235 | 4 | 15 | 500 | 18 | 500 | 4.38e-175 | 503 |
MS.gene052538.t1 | AT1G77210 | 50.719 | 487 | 235 | 4 | 15 | 500 | 18 | 500 | 4.38e-175 | 503 |
MS.gene052538.t1 | AT1G07340 | 51.731 | 491 | 226 | 6 | 12 | 498 | 12 | 495 | 3.95e-171 | 492 |
MS.gene052538.t1 | AT3G05960 | 49.503 | 503 | 245 | 6 | 11 | 509 | 6 | 503 | 3.70e-169 | 488 |
MS.gene052538.t1 | AT5G61520 | 53.377 | 459 | 203 | 4 | 49 | 501 | 2 | 455 | 1.04e-160 | 464 |
MS.gene052538.t1 | AT1G34580 | 50.658 | 456 | 216 | 5 | 50 | 500 | 1 | 452 | 4.28e-160 | 462 |
MS.gene052538.t1 | AT1G50310 | 62.890 | 353 | 128 | 3 | 152 | 503 | 11 | 361 | 7.41e-160 | 459 |
MS.gene052538.t1 | AT1G77210 | 50.286 | 350 | 169 | 4 | 152 | 500 | 6 | 351 | 1.22e-118 | 353 |
MS.gene052538.t1 | AT2G16120 | 31.928 | 498 | 291 | 11 | 11 | 485 | 13 | 485 | 1.37e-69 | 231 |
MS.gene052538.t1 | AT2G16130 | 31.526 | 498 | 293 | 11 | 11 | 485 | 13 | 485 | 4.80e-69 | 230 |
MS.gene052538.t1 | AT2G18480 | 31.723 | 476 | 274 | 11 | 37 | 489 | 36 | 483 | 7.19e-67 | 224 |
MS.gene052538.t1 | AT4G36670 | 30.461 | 499 | 299 | 11 | 14 | 490 | 8 | 480 | 4.41e-64 | 216 |
MS.gene052538.t1 | AT3G18830 | 29.961 | 514 | 308 | 12 | 16 | 507 | 29 | 512 | 1.18e-62 | 214 |
MS.gene052538.t1 | AT5G16150 | 29.167 | 480 | 297 | 9 | 11 | 485 | 97 | 538 | 5.92e-54 | 191 |
MS.gene052538.t1 | AT5G16150 | 29.167 | 480 | 297 | 9 | 11 | 485 | 97 | 538 | 5.92e-54 | 191 |
MS.gene052538.t1 | AT5G16150 | 29.167 | 480 | 297 | 9 | 11 | 485 | 97 | 538 | 5.92e-54 | 191 |
MS.gene052538.t1 | AT2G20780 | 27.883 | 477 | 309 | 9 | 22 | 491 | 54 | 502 | 5.98e-53 | 187 |
MS.gene052538.t1 | AT2G43330 | 28.942 | 501 | 317 | 11 | 27 | 514 | 35 | 509 | 5.98e-52 | 184 |
MS.gene052538.t1 | AT2G20780 | 29.425 | 435 | 284 | 8 | 64 | 491 | 26 | 444 | 1.52e-51 | 182 |
MS.gene052538.t1 | AT1G75220 | 28.662 | 471 | 302 | 8 | 23 | 490 | 48 | 487 | 6.03e-48 | 173 |
MS.gene052538.t1 | AT3G03090 | 31.489 | 470 | 281 | 13 | 31 | 485 | 55 | 498 | 5.58e-45 | 165 |
MS.gene052538.t1 | AT1G30220 | 31.956 | 363 | 214 | 8 | 20 | 375 | 25 | 361 | 5.93e-45 | 167 |
MS.gene052538.t1 | AT5G17010 | 28.936 | 470 | 293 | 10 | 31 | 485 | 55 | 498 | 9.06e-45 | 165 |
MS.gene052538.t1 | AT5G17010 | 28.936 | 470 | 293 | 10 | 31 | 485 | 55 | 498 | 9.06e-45 | 165 |
MS.gene052538.t1 | AT5G17010 | 28.936 | 470 | 293 | 10 | 31 | 485 | 55 | 498 | 9.06e-45 | 165 |
MS.gene052538.t1 | AT3G05155 | 25.577 | 477 | 318 | 8 | 12 | 487 | 16 | 456 | 1.90e-44 | 163 |
MS.gene052538.t1 | AT1G08930 | 26.931 | 479 | 307 | 10 | 12 | 485 | 47 | 487 | 1.09e-43 | 162 |
MS.gene052538.t1 | AT1G08930 | 26.931 | 479 | 307 | 10 | 12 | 485 | 47 | 487 | 1.09e-43 | 162 |
MS.gene052538.t1 | AT4G16480 | 31.653 | 357 | 215 | 6 | 20 | 366 | 24 | 361 | 1.68e-43 | 162 |
MS.gene052538.t1 | AT4G16480 | 31.653 | 357 | 215 | 6 | 20 | 366 | 24 | 361 | 1.68e-43 | 162 |
MS.gene052538.t1 | AT4G16480 | 31.653 | 357 | 215 | 6 | 20 | 366 | 24 | 361 | 1.68e-43 | 162 |
MS.gene052538.t1 | AT5G59250 | 29.339 | 484 | 292 | 12 | 23 | 485 | 98 | 552 | 5.17e-43 | 161 |
MS.gene052538.t1 | AT2G35740 | 29.972 | 357 | 221 | 6 | 21 | 367 | 24 | 361 | 1.66e-42 | 160 |
MS.gene052538.t1 | AT2G35740 | 32.000 | 125 | 80 | 2 | 368 | 491 | 441 | 561 | 6.00e-11 | 65.5 |
MS.gene052538.t1 | AT1G19450 | 28.178 | 472 | 303 | 8 | 23 | 490 | 49 | 488 | 3.19e-42 | 157 |
MS.gene052538.t1 | AT5G18840 | 29.584 | 409 | 264 | 11 | 83 | 485 | 84 | 474 | 1.82e-40 | 152 |
MS.gene052538.t1 | AT1G08900 | 26.667 | 405 | 280 | 6 | 83 | 485 | 23 | 412 | 6.21e-40 | 150 |
MS.gene052538.t1 | AT1G08900 | 26.667 | 405 | 280 | 6 | 83 | 485 | 65 | 454 | 1.28e-39 | 150 |
MS.gene052538.t1 | AT1G08900 | 26.667 | 405 | 280 | 6 | 83 | 485 | 65 | 454 | 1.28e-39 | 150 |
MS.gene052538.t1 | AT1G08900 | 26.667 | 405 | 280 | 6 | 83 | 485 | 57 | 446 | 1.31e-39 | 149 |
MS.gene052538.t1 | AT1G08890 | 26.536 | 407 | 282 | 5 | 83 | 487 | 67 | 458 | 1.70e-39 | 149 |
MS.gene052538.t1 | AT3G05400 | 25.523 | 478 | 317 | 12 | 11 | 485 | 14 | 455 | 2.53e-39 | 149 |
MS.gene052538.t1 | AT5G27360 | 27.708 | 480 | 302 | 12 | 12 | 485 | 24 | 464 | 3.98e-39 | 149 |
MS.gene052538.t1 | AT1G54730 | 27.233 | 459 | 297 | 9 | 29 | 485 | 38 | 461 | 4.98e-39 | 148 |
MS.gene052538.t1 | AT5G27360 | 27.708 | 480 | 302 | 12 | 12 | 485 | 72 | 512 | 1.03e-38 | 148 |
MS.gene052538.t1 | AT2G48020 | 27.451 | 408 | 279 | 6 | 83 | 488 | 68 | 460 | 1.43e-38 | 147 |
MS.gene052538.t1 | AT2G48020 | 27.451 | 408 | 279 | 6 | 83 | 488 | 68 | 460 | 1.43e-38 | 147 |
MS.gene052538.t1 | AT3G05160 | 28.538 | 424 | 276 | 10 | 65 | 485 | 2 | 401 | 2.28e-38 | 145 |
MS.gene052538.t1 | AT3G05160 | 28.538 | 424 | 276 | 10 | 65 | 485 | 2 | 401 | 2.28e-38 | 145 |
MS.gene052538.t1 | AT4G04760 | 27.816 | 435 | 284 | 8 | 65 | 493 | 2 | 412 | 2.65e-38 | 145 |
MS.gene052538.t1 | AT4G04760 | 27.349 | 479 | 305 | 10 | 21 | 493 | 30 | 471 | 2.99e-38 | 146 |
MS.gene052538.t1 | AT3G05160 | 28.538 | 424 | 276 | 10 | 65 | 485 | 51 | 450 | 4.01e-38 | 145 |
MS.gene052538.t1 | AT5G27350 | 27.386 | 482 | 301 | 12 | 12 | 485 | 20 | 460 | 4.26e-38 | 145 |
MS.gene052538.t1 | AT4G04750 | 27.447 | 470 | 299 | 12 | 21 | 485 | 35 | 467 | 7.80e-38 | 145 |
MS.gene052538.t1 | AT4G04750 | 27.447 | 470 | 299 | 12 | 21 | 485 | 35 | 467 | 7.80e-38 | 145 |
MS.gene052538.t1 | AT4G04750 | 27.447 | 470 | 299 | 12 | 21 | 485 | 79 | 511 | 8.09e-38 | 146 |
MS.gene052538.t1 | AT3G05165 | 27.187 | 423 | 283 | 8 | 65 | 485 | 60 | 459 | 1.44e-37 | 144 |
MS.gene052538.t1 | AT3G05165 | 27.187 | 423 | 283 | 8 | 65 | 485 | 60 | 459 | 1.44e-37 | 144 |
MS.gene052538.t1 | AT3G05165 | 27.187 | 423 | 283 | 8 | 65 | 485 | 60 | 459 | 1.44e-37 | 144 |
MS.gene052538.t1 | AT1G54730 | 27.015 | 459 | 277 | 9 | 29 | 485 | 38 | 440 | 5.73e-36 | 139 |
MS.gene052538.t1 | AT4G04760 | 26.446 | 484 | 300 | 12 | 21 | 493 | 30 | 468 | 8.24e-35 | 136 |
MS.gene052538.t1 | AT5G27360 | 29.815 | 379 | 241 | 10 | 113 | 485 | 1 | 360 | 8.33e-35 | 134 |
MS.gene052538.t1 | AT5G27360 | 29.815 | 379 | 241 | 10 | 113 | 485 | 1 | 360 | 8.33e-35 | 134 |
MS.gene052538.t1 | AT3G05400 | 24.895 | 478 | 300 | 14 | 11 | 485 | 14 | 435 | 2.73e-34 | 134 |
MS.gene052538.t1 | AT1G05030 | 26.190 | 462 | 303 | 11 | 29 | 485 | 85 | 513 | 5.74e-34 | 135 |
MS.gene052538.t1 | AT3G05150 | 27.751 | 418 | 260 | 11 | 83 | 485 | 75 | 465 | 5.84e-34 | 134 |
MS.gene052538.t1 | AT1G08900 | 26.648 | 364 | 250 | 6 | 83 | 444 | 65 | 413 | 6.24e-34 | 133 |
MS.gene052538.t1 | AT3G05150 | 27.751 | 418 | 260 | 11 | 83 | 485 | 75 | 465 | 6.67e-34 | 134 |
MS.gene052538.t1 | AT3G05150 | 27.751 | 418 | 260 | 11 | 83 | 485 | 75 | 465 | 6.67e-34 | 134 |
MS.gene052538.t1 | AT1G54730 | 26.555 | 418 | 270 | 9 | 29 | 444 | 38 | 420 | 2.98e-33 | 131 |
MS.gene052538.t1 | AT1G08920 | 24.755 | 408 | 284 | 8 | 83 | 485 | 72 | 461 | 4.63e-33 | 131 |
MS.gene052538.t1 | AT3G05165 | 25.275 | 455 | 303 | 9 | 11 | 463 | 18 | 437 | 5.65e-33 | 132 |
MS.gene052538.t1 | AT1G08920 | 24.634 | 410 | 289 | 8 | 83 | 485 | 72 | 468 | 5.90e-33 | 131 |
MS.gene052538.t1 | AT3G05165 | 27.322 | 366 | 241 | 8 | 65 | 428 | 60 | 402 | 6.91e-32 | 128 |
MS.gene052538.t1 | AT3G05165 | 27.322 | 366 | 241 | 8 | 65 | 428 | 60 | 402 | 6.91e-32 | 128 |
MS.gene052538.t1 | AT1G05030 | 26.214 | 412 | 285 | 9 | 79 | 485 | 64 | 461 | 1.58e-31 | 127 |
MS.gene052538.t1 | AT1G54730 | 26.316 | 418 | 250 | 9 | 29 | 444 | 38 | 399 | 4.02e-30 | 122 |
MS.gene052538.t1 | AT1G79820 | 25.100 | 498 | 312 | 16 | 3 | 485 | 35 | 486 | 4.78e-30 | 123 |
MS.gene052538.t1 | AT1G79820 | 25.100 | 498 | 312 | 16 | 3 | 485 | 35 | 486 | 4.78e-30 | 123 |
MS.gene052538.t1 | AT1G67300 | 24.719 | 445 | 313 | 8 | 47 | 485 | 57 | 485 | 1.08e-29 | 122 |
MS.gene052538.t1 | AT1G67300 | 24.719 | 445 | 313 | 8 | 47 | 485 | 57 | 485 | 1.08e-29 | 122 |
MS.gene052538.t1 | AT1G67300 | 24.719 | 445 | 314 | 9 | 47 | 485 | 57 | 486 | 5.28e-29 | 120 |
MS.gene052538.t1 | AT1G54730 | 26.410 | 390 | 250 | 9 | 29 | 416 | 38 | 392 | 1.24e-28 | 118 |
MS.gene052538.t1 | AT1G54730 | 26.410 | 390 | 250 | 9 | 29 | 416 | 38 | 392 | 1.24e-28 | 118 |
MS.gene052538.t1 | AT3G05155 | 24.854 | 342 | 224 | 7 | 12 | 352 | 16 | 325 | 2.45e-28 | 115 |
MS.gene052538.t1 | AT5G27360 | 26.859 | 417 | 260 | 12 | 12 | 422 | 24 | 401 | 5.79e-28 | 116 |
MS.gene052538.t1 | AT1G54730 | 26.994 | 326 | 206 | 6 | 29 | 352 | 38 | 333 | 1.58e-27 | 113 |
MS.gene052538.t1 | AT1G08920 | 24.176 | 364 | 253 | 8 | 83 | 441 | 72 | 417 | 3.05e-27 | 114 |
MS.gene052538.t1 | AT1G67300 | 23.724 | 392 | 278 | 7 | 47 | 433 | 57 | 432 | 1.43e-26 | 112 |
MS.gene052538.t1 | AT1G67300 | 23.724 | 392 | 278 | 7 | 47 | 433 | 57 | 432 | 1.43e-26 | 112 |
MS.gene052538.t1 | AT1G67300 | 23.575 | 386 | 274 | 7 | 47 | 427 | 57 | 426 | 5.27e-26 | 110 |
MS.gene052538.t1 | AT1G67300 | 23.575 | 386 | 274 | 7 | 47 | 427 | 57 | 426 | 5.27e-26 | 110 |
MS.gene052538.t1 | AT1G54730 | 26.154 | 390 | 230 | 9 | 29 | 416 | 38 | 371 | 1.82e-25 | 108 |
MS.gene052538.t1 | AT3G20460 | 22.963 | 405 | 295 | 5 | 83 | 485 | 93 | 482 | 2.22e-25 | 109 |
MS.gene052538.t1 | AT1G54730 | 26.403 | 303 | 194 | 5 | 29 | 329 | 38 | 313 | 3.71e-25 | 106 |
MS.gene052538.t1 | AT1G54730 | 26.403 | 303 | 194 | 5 | 29 | 329 | 38 | 313 | 3.71e-25 | 106 |
MS.gene052538.t1 | AT5G17010 | 25.793 | 473 | 244 | 14 | 31 | 485 | 52 | 435 | 5.30e-25 | 107 |
MS.gene052538.t1 | AT2G48020 | 27.206 | 272 | 186 | 4 | 83 | 352 | 68 | 329 | 7.48e-24 | 103 |
MS.gene052538.t1 | AT2G48020 | 26.786 | 280 | 193 | 4 | 83 | 360 | 68 | 337 | 1.06e-23 | 103 |
MS.gene052538.t1 | AT1G79820 | 23.820 | 445 | 279 | 15 | 3 | 433 | 35 | 433 | 3.86e-22 | 99.8 |
MS.gene052538.t1 | AT3G51490 | 27.731 | 238 | 152 | 4 | 23 | 259 | 4 | 222 | 1.43e-19 | 92.8 |
MS.gene052538.t1 | AT3G51490 | 25.439 | 228 | 141 | 6 | 272 | 483 | 500 | 714 | 1.94e-14 | 76.6 |
MS.gene052538.t1 | AT3G51490 | 27.731 | 238 | 152 | 4 | 23 | 259 | 4 | 222 | 1.44e-19 | 92.8 |
MS.gene052538.t1 | AT1G79820 | 23.494 | 498 | 272 | 16 | 3 | 485 | 35 | 438 | 7.50e-19 | 89.7 |
MS.gene052538.t1 | AT3G51490 | 32.353 | 170 | 113 | 2 | 91 | 259 | 4 | 172 | 4.47e-18 | 88.2 |
MS.gene052538.t1 | AT3G51490 | 25.439 | 228 | 141 | 6 | 272 | 483 | 450 | 664 | 1.63e-14 | 77.0 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.55e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.57e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.57e-16 | 83.2 |
MS.gene052538.t1 | AT4G35300 | 30.000 | 200 | 132 | 3 | 61 | 259 | 30 | 222 | 1.57e-16 | 83.2 |
MS.gene052538.t1 | AT1G20840 | 26.455 | 189 | 137 | 2 | 72 | 259 | 33 | 220 | 2.69e-14 | 76.3 |
MS.gene052538.t1 | AT1G20840 | 26.455 | 189 | 137 | 2 | 72 | 259 | 33 | 220 | 2.69e-14 | 76.3 |
MS.gene052538.t1 | AT1G79360 | 22.302 | 278 | 188 | 8 | 87 | 348 | 118 | 383 | 1.89e-11 | 67.0 |
Find 143 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTCTATTGGAGCCAAATT+TGG | 0.128425 | 4.3:+23213078 | MS.gene052538:CDS |
ATTTAGTTCTGTTGGGTTTA+AGG | 0.155126 | 4.3:+23212806 | MS.gene052538:CDS |
CTCATTGGTGCCCTTGTTAA+TGG | 0.165307 | 4.3:+23211052 | MS.gene052538:CDS |
GTTTCCATCAATTCCAAATT+TGG | 0.167664 | 4.3:-23213091 | None:intergenic |
GGCTACGATATTGGAATTTC+AGG | 0.203694 | 4.3:+23210598 | MS.gene052538:CDS |
TAGAGCTCCTCTGTATTTAT+AGG | 0.220000 | 4.3:-23212367 | None:intergenic |
CCATTCTTCCAGCAATTTAC+AGG | 0.241741 | 4.3:+23212750 | MS.gene052538:CDS |
GAAGACCACCTTCAAGAAAA+AGG | 0.248083 | 4.3:-23212926 | None:intergenic |
TTAATCTTCGGCTACGATAT+TGG | 0.263065 | 4.3:+23210589 | MS.gene052538:CDS |
TTTCATGTTGCCTGAAACTA+AGG | 0.266002 | 4.3:+23213392 | MS.gene052538:CDS |
CCACGTTCGATCATTGAATT+AGG | 0.267161 | 4.3:-23212555 | None:intergenic |
TCCTAATCCACCTTTGAGTT+TGG | 0.277415 | 4.3:-23212457 | None:intergenic |
ACTGGCATTGTTAATGCTTT+TGG | 0.278218 | 4.3:+23212858 | MS.gene052538:CDS |
ATTGGAATGCCCTTAGTTTC+AGG | 0.282103 | 4.3:-23213402 | None:intergenic |
AATCACAATTGGTATTCTTA+TGG | 0.292640 | 4.3:+23212410 | MS.gene052538:CDS |
GCCATCTCAGAGAGGTAAAT+TGG | 0.301556 | 4.3:-23212342 | None:intergenic |
GGAGCCAAATTTGGAATTGA+TGG | 0.308027 | 4.3:+23213087 | MS.gene052538:CDS |
ATTAGGATGGAGGTTAAGTT+TGG | 0.309537 | 4.3:+23212473 | MS.gene052538:CDS |
ATTGGAGTTGCTGCCTCTAT+TGG | 0.326081 | 4.3:+23213066 | MS.gene052538:CDS |
TCCAAACTCAAAGGTGGATT+AGG | 0.329831 | 4.3:+23212456 | MS.gene052538:CDS |
CTGCTCTGTCACATGAAGTT+TGG | 0.339746 | 4.3:+23213318 | MS.gene052538:CDS |
GGAGGTTTATTGTTCCTCAT+TGG | 0.342381 | 4.3:+23211037 | MS.gene052538:CDS |
ATATAGGCCTCAACTTTCTA+TGG | 0.343049 | 4.3:+23212716 | MS.gene052538:CDS |
TCTTGGTCATGGGGCCCTCT+TGG | 0.350255 | 4.3:+23213183 | MS.gene052538:CDS |
CATTGATTCCTGTAAATTGC+TGG | 0.350438 | 4.3:-23212758 | None:intergenic |
GGTCGGATATTACTAGGATT+TGG | 0.351820 | 4.3:+23211106 | MS.gene052538:CDS |
AGAGCTCCTCTGTATTTATA+GGG | 0.357249 | 4.3:-23212366 | None:intergenic |
GTTTACATCGTCCTTGTACT+TGG | 0.357718 | 4.3:+23210943 | MS.gene052538:CDS |
TGGTATTGGATTTGCTAATC+AGG | 0.360482 | 4.3:+23211126 | MS.gene052538:CDS |
TCCAAATTTGGCTCCAATAG+AGG | 0.360989 | 4.3:-23213079 | None:intergenic |
ATGGGGCCCTCTTGGTTGGT+TGG | 0.362889 | 4.3:+23213191 | MS.gene052538:CDS |
CCTGCACTTATAATAACTAT+TGG | 0.365502 | 4.3:+23212510 | MS.gene052538:CDS |
ATTTGTTGCAAAGGAAATAT+AGG | 0.371035 | 4.3:+23212700 | MS.gene052538:CDS |
CTGTGCTATTTAGTTCTGTT+GGG | 0.372590 | 4.3:+23212799 | MS.gene052538:CDS |
CCTGTGCTATTTAGTTCTGT+TGG | 0.373030 | 4.3:+23212798 | MS.gene052538:CDS |
CTCATGTCCTCTGTGATAAC+TGG | 0.373665 | 4.3:+23212840 | MS.gene052538:CDS |
ACCTTGCCCATCTCTTCAAT+TGG | 0.377091 | 4.3:-23213420 | None:intergenic |
TTGTTGACCATGATGGTAAA+GGG | 0.379215 | 4.3:+23213472 | MS.gene052538:CDS |
ATGGCTTCGCCCAACACGTT+TGG | 0.382643 | 4.3:+23211071 | MS.gene052538:CDS |
TACCAATTGTGATTGATAAC+TGG | 0.383905 | 4.3:-23212401 | None:intergenic |
TTGAAGAGATGGGCAAGGTT+TGG | 0.384917 | 4.3:+23213424 | MS.gene052538:CDS |
CTGGAAGAATGGAATCAATA+TGG | 0.396053 | 4.3:-23212739 | None:intergenic |
ATCATTGAATTAGGAGTGTC+TGG | 0.396699 | 4.3:-23212546 | None:intergenic |
AATGAATAGCACCACAACTA+TGG | 0.397491 | 4.3:-23213139 | None:intergenic |
TCAACAAATCTAGACCAGTA+TGG | 0.405752 | 4.3:-23213456 | None:intergenic |
ACAAAAGGAGTGAGGTTGCC+AGG | 0.420471 | 4.3:-23210532 | None:intergenic |
ATGTAAACATCGTTAGTATC+TGG | 0.420576 | 4.3:-23210928 | None:intergenic |
GTTAAGTTTGGGTGGTGCTA+TGG | 0.435605 | 4.3:+23212485 | MS.gene052538:CDS |
ATATTACTAGGATTTGGTAT+TGG | 0.435635 | 4.3:+23211112 | MS.gene052538:CDS |
CTTCTTTGCTTTCTTTGTAG+TGG | 0.435983 | 4.3:+23213350 | MS.gene052538:CDS |
TCTTCAAATGCTCATTTGTC+AGG | 0.437765 | 4.3:+23212944 | MS.gene052538:CDS |
GGTCATGGGGCCCTCTTGGT+TGG | 0.438756 | 4.3:+23213187 | MS.gene052538:CDS |
TTCCAGTTATCAATCACAAT+TGG | 0.441444 | 4.3:+23212399 | MS.gene052538:CDS |
GGCCGCGTTGCTGTCTTCGC+TGG | 0.454608 | 4.3:+23210964 | MS.gene052538:CDS |
CCAATAGTTATTATAAGTGC+AGG | 0.455615 | 4.3:-23212510 | None:intergenic |
TCGAGTGTCACCCGTAGGTT+TGG | 0.459015 | 4.3:+23210992 | MS.gene052538:CDS |
GATCAACATCCAAACGTGTT+GGG | 0.459202 | 4.3:-23211080 | None:intergenic |
CCTGTAAATTGCTGGAAGAA+TGG | 0.461481 | 4.3:-23212750 | None:intergenic |
TTAGGATGGAGGTTAAGTTT+GGG | 0.461886 | 4.3:+23212474 | MS.gene052538:CDS |
CTCCTTGTTGCTTCCACCGG+TGG | 0.461907 | 4.3:-23210506 | None:intergenic |
CTTGGAGGAATTTGTTGCAA+AGG | 0.464102 | 4.3:+23212691 | MS.gene052538:CDS |
GTACTCCTTGTTGCTTCCAC+CGG | 0.465704 | 4.3:-23210509 | None:intergenic |
GCAATGGGAGGTTTAATCTT+CGG | 0.466615 | 4.3:+23210577 | MS.gene052538:CDS |
TTTGTTGACCATGATGGTAA+AGG | 0.483377 | 4.3:+23213471 | MS.gene052538:CDS |
AAAGGGGATGGACTTGAGAT+GGG | 0.485418 | 4.3:+23213489 | MS.gene052538:CDS |
CAGCAACGCGGCCAAGTACA+AGG | 0.486519 | 4.3:-23210954 | None:intergenic |
GCATGCAAGTGGAAAATCCT+TGG | 0.491572 | 4.3:+23212673 | MS.gene052538:CDS |
GACAAGTGAGATCTTTCCAT+TGG | 0.495409 | 4.3:+23213215 | MS.gene052538:CDS |
TTTAGGTGGGGTGACGTCGA+TGG | 0.497077 | 4.3:+23210820 | MS.gene052538:intron |
ATGCATGTTACAGTAACAAA+AGG | 0.498468 | 4.3:-23210547 | None:intergenic |
ATCGTTGGTCGGATATTACT+AGG | 0.500717 | 4.3:+23211100 | MS.gene052538:CDS |
GGGCATTCCAATTGAAGAGA+TGG | 0.501903 | 4.3:+23213413 | MS.gene052538:CDS |
TAAAGGGGATGGACTTGAGA+TGG | 0.503144 | 4.3:+23213488 | MS.gene052538:CDS |
CACGTTTGGATGTTGATCGT+TGG | 0.504755 | 4.3:+23211085 | MS.gene052538:CDS |
TCCTTGTTGCTTCCACCGGT+GGG | 0.512176 | 4.3:-23210505 | None:intergenic |
GTCCATCCCCTTTACCATCA+TGG | 0.512726 | 4.3:-23213479 | None:intergenic |
CAAACTTCATGTGACAGAGC+AGG | 0.516453 | 4.3:-23213317 | None:intergenic |
CTTTCCATTGGAGATTCGAT+CGG | 0.519445 | 4.3:+23213227 | MS.gene052538:CDS |
GATTCTCTTAAGATGAGCCT+TGG | 0.521411 | 4.3:-23212592 | None:intergenic |
ACAACTATGGCATACCACTT+TGG | 0.522477 | 4.3:-23213126 | None:intergenic |
CGCGTTGCTGTCTTCGCTGG+TGG | 0.523120 | 4.3:+23210967 | MS.gene052538:CDS |
ACATGCATTGTTGCAGCAAT+GGG | 0.526449 | 4.3:+23210562 | MS.gene052538:CDS |
CTTTGCAACAAATTCCTCCA+AGG | 0.529603 | 4.3:-23212690 | None:intergenic |
TACCACTTTGGTAATTCACC+AGG | 0.529696 | 4.3:-23213114 | None:intergenic |
GGCATTCCAATTGAAGAGAT+GGG | 0.535838 | 4.3:+23213414 | MS.gene052538:CDS |
AGAGATGGGCAAGGTTTGGA+AGG | 0.536313 | 4.3:+23213428 | MS.gene052538:CDS |
CGATCAACATCCAAACGTGT+TGG | 0.545411 | 4.3:-23211081 | None:intergenic |
GGATGGAGGTTAAGTTTGGG+TGG | 0.545988 | 4.3:+23212477 | MS.gene052538:CDS |
CAACAAATCTAGACCAGTAT+GGG | 0.547219 | 4.3:-23213455 | None:intergenic |
TCTAGATTTGTTGACCATGA+TGG | 0.547913 | 4.3:+23213465 | MS.gene052538:CDS |
GCCAATTTACCTCTCTGAGA+TGG | 0.553733 | 4.3:+23212341 | MS.gene052538:CDS |
TACAGAGGAGCTCTAAGTGT+TGG | 0.555189 | 4.3:+23212375 | MS.gene052538:CDS |
ATGCTTCACTAGCTGCTACA+AGG | 0.558368 | 4.3:-23212650 | None:intergenic |
TTGTAGTTGATAGGTTGGGT+AGG | 0.559094 | 4.3:+23212898 | MS.gene052538:CDS |
TGGTGATCGCGATGGAGCCA+AGG | 0.560280 | 4.3:+23212575 | MS.gene052538:CDS |
TTTGGAAGGGACACCCATAC+TGG | 0.565186 | 4.3:+23213442 | MS.gene052538:CDS |
AACATGCATTGTTGCAGCAA+TGG | 0.567220 | 4.3:+23210561 | MS.gene052538:CDS |
CCGGTGGGTATTCCTACTGC+AGG | 0.567452 | 4.3:-23210490 | None:intergenic |
AAACTTCATGTGACAGAGCA+GGG | 0.568700 | 4.3:-23213316 | None:intergenic |
AAAGAAGTAGTTCAATACAT+TGG | 0.569180 | 4.3:-23212433 | None:intergenic |
CATCAACATCTTCGACTCCA+CGG | 0.569971 | 4.3:-23212614 | None:intergenic |
TTGAATTAGGAGTGTCTGGA+AGG | 0.572552 | 4.3:-23212542 | None:intergenic |
TTTGGATGTTGATCGTTGGT+CGG | 0.579404 | 4.3:+23211089 | MS.gene052538:CDS |
AACTCAAAGGTGGATTAGGA+TGG | 0.579774 | 4.3:+23212460 | MS.gene052538:CDS |
TGCATTGTTGCAGCAATGGG+AGG | 0.582030 | 4.3:+23210565 | MS.gene052538:CDS |
CAAAAGGAGTGAGGTTGCCA+GGG | 0.584157 | 4.3:-23210531 | None:intergenic |
TCCAATTGAAGAGATGGGCA+AGG | 0.586224 | 4.3:+23213419 | MS.gene052538:CDS |
CAGTTATCACAGAGGACATG+AGG | 0.594733 | 4.3:-23212839 | None:intergenic |
TGCAAGTGGAAAATCCTTGG+AGG | 0.596231 | 4.3:+23212676 | MS.gene052538:CDS |
TTTGGAATTGATGGAAACCC+TGG | 0.600453 | 4.3:+23213096 | MS.gene052538:CDS |
GGGATGGACTTGAGATGGGA+AGG | 0.602146 | 4.3:+23213493 | MS.gene052538:CDS |
TCAAAGGTGGATTAGGATGG+AGG | 0.608349 | 4.3:+23212463 | MS.gene052538:CDS |
TAGTGAAGCATGCATGCAAG+TGG | 0.617967 | 4.3:+23212662 | MS.gene052538:CDS |
GACCATGATGGTAAAGGGGA+TGG | 0.621344 | 4.3:+23213477 | MS.gene052538:CDS |
ATCGAACGTGGTGATCGCGA+TGG | 0.621882 | 4.3:+23212567 | MS.gene052538:CDS |
TGGCGTCGAGTGTCACCCGT+AGG | 0.622909 | 4.3:+23210987 | MS.gene052538:CDS |
GCTCATCTTAAGAGAATCCG+TGG | 0.624088 | 4.3:+23212597 | MS.gene052538:CDS |
GTTGGGCGAAGCCATTAACA+AGG | 0.624989 | 4.3:-23211063 | None:intergenic |
TTCATGTTGCCTGAAACTAA+GGG | 0.630960 | 4.3:+23213393 | MS.gene052538:CDS |
CATTAACAAGGGCACCAATG+AGG | 0.634579 | 4.3:-23211051 | None:intergenic |
GCAGCCGATCGAATCTCCAA+TGG | 0.635017 | 4.3:-23213231 | None:intergenic |
GAGATGGGCAAGGTTTGGAA+GGG | 0.640104 | 4.3:+23213429 | MS.gene052538:CDS |
CCAACAGAACTAAATAGCAC+AGG | 0.643934 | 4.3:-23212798 | None:intergenic |
TGTTGACCATGATGGTAAAG+GGG | 0.647014 | 4.3:+23213473 | MS.gene052538:CDS |
AGTTATCACAGAGGACATGA+GGG | 0.648566 | 4.3:-23212838 | None:intergenic |
CAATAGTTATTATAAGTGCA+GGG | 0.654036 | 4.3:-23212509 | None:intergenic |
ACCCACCGGTGGAAGCAACA+AGG | 0.655531 | 4.3:+23210504 | MS.gene052538:CDS |
GGAAGCAACAAGGAGTACCC+TGG | 0.659484 | 4.3:+23210514 | MS.gene052538:CDS |
ACCACTTTGGTAATTCACCA+GGG | 0.663886 | 4.3:-23213113 | None:intergenic |
TTGTCACCAACCAACCAAGA+GGG | 0.665300 | 4.3:-23213197 | None:intergenic |
GCAGTAGGAATACCCACCGG+TGG | 0.665433 | 4.3:+23210493 | MS.gene052538:CDS |
CCTAATTCAATGATCGAACG+TGG | 0.667764 | 4.3:+23212555 | MS.gene052538:CDS |
CTTGTCACCAACCAACCAAG+AGG | 0.682073 | 4.3:-23213198 | None:intergenic |
ATGGCTCCCTATAAATACAG+AGG | 0.682988 | 4.3:+23212360 | MS.gene052538:CDS |
TTACAGTAACAAAAGGAGTG+AGG | 0.685569 | 4.3:-23210540 | None:intergenic |
ACCCTGGTGAATTACCAAAG+TGG | 0.706182 | 4.3:+23213112 | MS.gene052538:CDS |
CACCAGCGAAGACAGCAACG+CGG | 0.707755 | 4.3:-23210966 | None:intergenic |
CCTGCAGTAGGAATACCCAC+CGG | 0.715600 | 4.3:+23210490 | MS.gene052538:CDS |
AATATGGCCATAGAAAGTTG+AGG | 0.720399 | 4.3:-23212723 | None:intergenic |
TTGGGCGAAGCCATTAACAA+GGG | 0.721889 | 4.3:-23211062 | None:intergenic |
TATAGGGAGCCATCTCAGAG+AGG | 0.733658 | 4.3:-23212350 | None:intergenic |
AACAATGCCAGTTATCACAG+AGG | 0.751503 | 4.3:-23212847 | None:intergenic |
AAAGTGGTATGCCATAGTTG+TGG | 0.769434 | 4.3:+23213128 | MS.gene052538:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAAACAAATATATAGT+TGG | - | chr4.3:23213025-23213044 | None:intergenic | 10.0% |
!!! | ATATATTTTAAAAAGAATCA+AGG | + | chr4.3:23212091-23212110 | MS.gene052538:intron | 10.0% |
!!! | TAAAATCAAAATATTTTAAG+AGG | + | chr4.3:23211470-23211489 | MS.gene052538:intron | 10.0% |
!!! | TATATTTTAAAAAGAATCAA+GGG | + | chr4.3:23212092-23212111 | MS.gene052538:intron | 10.0% |
!! | ACATCTAAAAATTATTAAAC+TGG | + | chr4.3:23212249-23212268 | MS.gene052538:intron | 15.0% |
!! | ATAATTTAATAATAACAGTG+TGG | - | chr4.3:23211591-23211610 | None:intergenic | 15.0% |
!! | TAAACTTAAGTACATAAAAA+AGG | - | chr4.3:23211344-23211363 | None:intergenic | 15.0% |
!! | TAATTTAATAATAACAGTGT+GGG | - | chr4.3:23211590-23211609 | None:intergenic | 15.0% |
!!! | AATAATTTTTAGATGTAATC+AGG | - | chr4.3:23212245-23212264 | None:intergenic | 15.0% |
!!! | AGATTAGATGAAATAATTTT+GGG | - | chr4.3:23212281-23212300 | None:intergenic | 15.0% |
!!! | CAAAAAAAAGTACATAAAAA+AGG | - | chr4.3:23211315-23211334 | None:intergenic | 15.0% |
!!! | CTTTTTTATGTACTTTTTTT+TGG | + | chr4.3:23211313-23211332 | MS.gene052538:intron | 15.0% |
!!! | TAGATTAGATGAAATAATTT+TGG | - | chr4.3:23212282-23212301 | None:intergenic | 15.0% |
!!! | TTTGTTTAATTTGATATTTG+TGG | + | chr4.3:23213033-23213052 | MS.gene052538:intron | 15.0% |
!! | AACTACAAAAATTGAGATAA+TGG | - | chr4.3:23212886-23212905 | None:intergenic | 20.0% |
!! | ACATTTAAAAAACACTGATA+TGG | + | chr4.3:23211971-23211990 | MS.gene052538:intron | 20.0% |
!! | AGAGACATGTTTATATTAAA+AGG | - | chr4.3:23211175-23211194 | None:intergenic | 20.0% |
!! | AGTTGGAAAAAAAATAAACA+CGG | - | chr4.3:23213008-23213027 | None:intergenic | 20.0% |
!! | ATTATCAGAAACAATAACAA+TGG | - | chr4.3:23211267-23211286 | None:intergenic | 20.0% |
!! | TATATTCAACTTATCAACAA+AGG | + | chr4.3:23212219-23212238 | MS.gene052538:intron | 20.0% |
!! | TTATTTCATCTAATCTACAA+TGG | + | chr4.3:23212285-23212304 | MS.gene052538:intron | 20.0% |
!!! | ACGTATTTTATTGCAATTAA+AGG | - | chr4.3:23210653-23210672 | None:intergenic | 20.0% |
!!! | AGAATTTGATAACTTTGTAT+CGG | - | chr4.3:23212061-23212080 | None:intergenic | 20.0% |
! | AAAGAAGTAGTTCAATACAT+TGG | - | chr4.3:23212436-23212455 | None:intergenic | 25.0% |
! | AATCACAATTGGTATTCTTA+TGG | + | chr4.3:23212410-23212429 | MS.gene052538:CDS | 25.0% |
! | CAATAAAATACGTGTAAAGT+TGG | + | chr4.3:23210660-23210679 | MS.gene052538:intron | 25.0% |
! | CAATAGTTATTATAAGTGCA+GGG | - | chr4.3:23212512-23212531 | None:intergenic | 25.0% |
! | GGAAAAAACTTCAACAAAAA+TGG | - | chr4.3:23210848-23210867 | None:intergenic | 25.0% |
! | TGACAACAATATAAAAGATG+AGG | - | chr4.3:23210715-23210734 | None:intergenic | 25.0% |
! | TGTATTATTAATCCAAGTCA+TGG | - | chr4.3:23211232-23211251 | None:intergenic | 25.0% |
!! | AATTGTTTGACTAAGCATTT+TGG | + | chr4.3:23211783-23211802 | MS.gene052538:intron | 25.0% |
!! | ATATTACTAGGATTTGGTAT+TGG | + | chr4.3:23211112-23211131 | MS.gene052538:CDS | 25.0% |
!! | ATTTGTTGCAAAGGAAATAT+AGG | + | chr4.3:23212700-23212719 | MS.gene052538:CDS | 25.0% |
!! | TCTCAATTTTTGTAGTTGAT+AGG | + | chr4.3:23212889-23212908 | MS.gene052538:CDS | 25.0% |
!!! | AATTTTTGTAGTTGATAGGT+TGG | + | chr4.3:23212893-23212912 | MS.gene052538:CDS | 25.0% |
!!! | ATTTTTGTAGTTGATAGGTT+GGG | + | chr4.3:23212894-23212913 | MS.gene052538:CDS | 25.0% |
!!! | GTTAGTGCATTATCTTTTTT+TGG | + | chr4.3:23211625-23211644 | MS.gene052538:intron | 25.0% |
!!! | TTTGATTTGATTTGATTGCA+TGG | + | chr4.3:23210791-23210810 | MS.gene052538:intron | 25.0% |
!!! | TTTGTTGAAGTTTTTTCCAT+CGG | + | chr4.3:23210850-23210869 | MS.gene052538:CDS | 25.0% |
ATGCATGTTACAGTAACAAA+AGG | - | chr4.3:23210550-23210569 | None:intergenic | 30.0% | |
ATGTAAACATCGTTAGTATC+TGG | - | chr4.3:23210931-23210950 | None:intergenic | 30.0% | |
CAATAAACCTCCAAAAAACA+TGG | - | chr4.3:23211029-23211048 | None:intergenic | 30.0% | |
CATTTGTCAGGTAACTATTA+GGG | + | chr4.3:23212956-23212975 | MS.gene052538:intron | 30.0% | |
CCAATAGTTATTATAAGTGC+AGG | - | chr4.3:23212513-23212532 | None:intergenic | 30.0% | |
CCTGCACTTATAATAACTAT+TGG | + | chr4.3:23212510-23212529 | MS.gene052538:CDS | 30.0% | |
GTTTCCATCAATTCCAAATT+TGG | - | chr4.3:23213094-23213113 | None:intergenic | 30.0% | |
TCATTTGTCAGGTAACTATT+AGG | + | chr4.3:23212955-23212974 | MS.gene052538:intron | 30.0% | |
TTCCAGTTATCAATCACAAT+TGG | + | chr4.3:23212399-23212418 | MS.gene052538:CDS | 30.0% | |
! | TACCAATTGTGATTGATAAC+TGG | - | chr4.3:23212404-23212423 | None:intergenic | 30.0% |
! | TACTTCTTTTCCAAACTCAA+AGG | + | chr4.3:23212447-23212466 | MS.gene052538:CDS | 30.0% |
! | TGATTGCATGGATTTTCTTT+AGG | + | chr4.3:23210803-23210822 | MS.gene052538:intron | 30.0% |
!! | ATTTAGTTCTGTTGGGTTTA+AGG | + | chr4.3:23212806-23212825 | MS.gene052538:CDS | 30.0% |
!!! | AAACTTTCCATGTTTTTTGG+AGG | + | chr4.3:23211019-23211038 | MS.gene052538:CDS | 30.0% |
!!! | CGAAAACTTTCCATGTTTTT+TGG | + | chr4.3:23211016-23211035 | MS.gene052538:CDS | 30.0% |
!!! | TCCTACACTGTTTTTTTAGA+GGG | + | chr4.3:23211563-23211582 | MS.gene052538:intron | 30.0% |
AAGACCACCTTCAAGAAAAA+GGG | - | chr4.3:23212928-23212947 | None:intergenic | 35.0% | |
AATAATGCTAGTTATCCCGA+TGG | - | chr4.3:23212141-23212160 | None:intergenic | 35.0% | |
AATATGGCCATAGAAAGTTG+AGG | - | chr4.3:23212726-23212745 | None:intergenic | 35.0% | |
AATGAATAGCACCACAACTA+TGG | - | chr4.3:23213142-23213161 | None:intergenic | 35.0% | |
AGAGCTCCTCTGTATTTATA+GGG | - | chr4.3:23212369-23212388 | None:intergenic | 35.0% | |
ATATAGGCCTCAACTTTCTA+TGG | + | chr4.3:23212716-23212735 | MS.gene052538:CDS | 35.0% | |
ATTAGGATGGAGGTTAAGTT+TGG | + | chr4.3:23212473-23212492 | MS.gene052538:CDS | 35.0% | |
CAACAAATCTAGACCAGTAT+GGG | - | chr4.3:23213458-23213477 | None:intergenic | 35.0% | |
CAGGTAACTATTAGGGTTTA+AGG | + | chr4.3:23212963-23212982 | MS.gene052538:intron | 35.0% | |
CTGGAAGAATGGAATCAATA+TGG | - | chr4.3:23212742-23212761 | None:intergenic | 35.0% | |
CTTCTTTGCTTTCTTTGTAG+TGG | + | chr4.3:23213350-23213369 | MS.gene052538:CDS | 35.0% | |
TAGAGCTCCTCTGTATTTAT+AGG | - | chr4.3:23212370-23212389 | None:intergenic | 35.0% | |
TCAACAAATCTAGACCAGTA+TGG | - | chr4.3:23213459-23213478 | None:intergenic | 35.0% | |
TCTTCAAATGCTCATTTGTC+AGG | + | chr4.3:23212944-23212963 | MS.gene052538:CDS | 35.0% | |
TTAATCTTCGGCTACGATAT+TGG | + | chr4.3:23210589-23210608 | MS.gene052538:CDS | 35.0% | |
TTACAGTAACAAAAGGAGTG+AGG | - | chr4.3:23210543-23210562 | None:intergenic | 35.0% | |
TTAGGATGGAGGTTAAGTTT+GGG | + | chr4.3:23212474-23212493 | MS.gene052538:CDS | 35.0% | |
TTCATGTTGCCTGAAACTAA+GGG | + | chr4.3:23213393-23213412 | MS.gene052538:CDS | 35.0% | |
TTGTTGACCATGATGGTAAA+GGG | + | chr4.3:23213472-23213491 | MS.gene052538:CDS | 35.0% | |
TTTCATGTTGCCTGAAACTA+AGG | + | chr4.3:23213392-23213411 | MS.gene052538:CDS | 35.0% | |
TTTGTTGACCATGATGGTAA+AGG | + | chr4.3:23213471-23213490 | MS.gene052538:CDS | 35.0% | |
! | AAAGTTTTCGACCAAACCTA+CGG | - | chr4.3:23211006-23211025 | None:intergenic | 35.0% |
! | AATTTCGCTAGCTTATCCAT+CGG | + | chr4.3:23212122-23212141 | MS.gene052538:intron | 35.0% |
! | ACCCTCTAAAAAAACAGTGT+AGG | - | chr4.3:23211567-23211586 | None:intergenic | 35.0% |
! | ACTGGCATTGTTAATGCTTT+TGG | + | chr4.3:23212858-23212877 | MS.gene052538:CDS | 35.0% |
! | CTTATGTAGCAGCATTTTCT+TGG | + | chr4.3:23213166-23213185 | MS.gene052538:CDS | 35.0% |
! | TGCATGGATTTTCTTTAGGT+GGG | + | chr4.3:23210807-23210826 | MS.gene052538:intron | 35.0% |
! | TTCTTTTCCAAACTCAAAGG+TGG | + | chr4.3:23212450-23212469 | MS.gene052538:CDS | 35.0% |
! | TTGCATGGATTTTCTTTAGG+TGG | + | chr4.3:23210806-23210825 | MS.gene052538:intron | 35.0% |
!! | AGACAATTTGTTATGCTGAC+AGG | + | chr4.3:23212162-23212181 | MS.gene052538:intron | 35.0% |
!! | ATCATTGAATTAGGAGTGTC+TGG | - | chr4.3:23212549-23212568 | None:intergenic | 35.0% |
!! | CATTGATTCCTGTAAATTGC+TGG | - | chr4.3:23212761-23212780 | None:intergenic | 35.0% |
!! | CTGTGCTATTTAGTTCTGTT+GGG | + | chr4.3:23212799-23212818 | MS.gene052538:CDS | 35.0% |
!! | GACAATTTGTTATGCTGACA+GGG | + | chr4.3:23212163-23212182 | MS.gene052538:intron | 35.0% |
!! | TCTAGATTTGTTGACCATGA+TGG | + | chr4.3:23213465-23213484 | MS.gene052538:CDS | 35.0% |
!! | TGGTATTGGATTTGCTAATC+AGG | + | chr4.3:23211126-23211145 | MS.gene052538:CDS | 35.0% |
!!! | AGTTTTTTCCATCGGTGTAT+CGG | + | chr4.3:23210858-23210877 | MS.gene052538:CDS | 35.0% |
!!! | GTCCTACACTGTTTTTTTAG+AGG | + | chr4.3:23211562-23211581 | MS.gene052538:intron | 35.0% |
AAACTTCATGTGACAGAGCA+GGG | - | chr4.3:23213319-23213338 | None:intergenic | 40.0% | |
AAAGTGGTATGCCATAGTTG+TGG | + | chr4.3:23213128-23213147 | MS.gene052538:CDS | 40.0% | |
AACAATGCCAGTTATCACAG+AGG | - | chr4.3:23212850-23212869 | None:intergenic | 40.0% | |
AACATGCATTGTTGCAGCAA+TGG | + | chr4.3:23210561-23210580 | MS.gene052538:CDS | 40.0% | |
AATCCAAGTCATGGCAGATT+TGG | - | chr4.3:23211223-23211242 | None:intergenic | 40.0% | |
ACAACTATGGCATACCACTT+TGG | - | chr4.3:23213129-23213148 | None:intergenic | 40.0% | |
ACATGCATTGTTGCAGCAAT+GGG | + | chr4.3:23210562-23210581 | MS.gene052538:CDS | 40.0% | |
AGTTATCACAGAGGACATGA+GGG | - | chr4.3:23212841-23212860 | None:intergenic | 40.0% | |
ATCGTTGGTCGGATATTACT+AGG | + | chr4.3:23211100-23211119 | MS.gene052538:CDS | 40.0% | |
ATGGCTCCCTATAAATACAG+AGG | + | chr4.3:23212360-23212379 | MS.gene052538:CDS | 40.0% | |
ATTGGAATGCCCTTAGTTTC+AGG | - | chr4.3:23213405-23213424 | None:intergenic | 40.0% | |
ATTTGTGGATGTGCACAGAT+TGG | + | chr4.3:23213048-23213067 | MS.gene052538:intron | 40.0% | |
CCAACAGAACTAAATAGCAC+AGG | - | chr4.3:23212801-23212820 | None:intergenic | 40.0% | |
CCACGTTCGATCATTGAATT+AGG | - | chr4.3:23212558-23212577 | None:intergenic | 40.0% | |
CCATTCTTCCAGCAATTTAC+AGG | + | chr4.3:23212750-23212769 | MS.gene052538:CDS | 40.0% | |
CCTAATTCAATGATCGAACG+TGG | + | chr4.3:23212555-23212574 | MS.gene052538:CDS | 40.0% | |
CCTGTAAATTGCTGGAAGAA+TGG | - | chr4.3:23212753-23212772 | None:intergenic | 40.0% | |
CTTTCCATTGGAGATTCGAT+CGG | + | chr4.3:23213227-23213246 | MS.gene052538:CDS | 40.0% | |
CTTTGCAACAAATTCCTCCA+AGG | - | chr4.3:23212693-23212712 | None:intergenic | 40.0% | |
GAAGACCACCTTCAAGAAAA+AGG | - | chr4.3:23212929-23212948 | None:intergenic | 40.0% | |
GACAAGTGAGATCTTTCCAT+TGG | + | chr4.3:23213215-23213234 | MS.gene052538:CDS | 40.0% | |
GATCAACATCCAAACGTGTT+GGG | - | chr4.3:23211083-23211102 | None:intergenic | 40.0% | |
GATTCTCTTAAGATGAGCCT+TGG | - | chr4.3:23212595-23212614 | None:intergenic | 40.0% | |
GCAATGGGAGGTTTAATCTT+CGG | + | chr4.3:23210577-23210596 | MS.gene052538:CDS | 40.0% | |
GGAGGTTTATTGTTCCTCAT+TGG | + | chr4.3:23211037-23211056 | MS.gene052538:CDS | 40.0% | |
GGCATTCCAATTGAAGAGAT+GGG | + | chr4.3:23213414-23213433 | MS.gene052538:CDS | 40.0% | |
GGCTACGATATTGGAATTTC+AGG | + | chr4.3:23210598-23210617 | MS.gene052538:CDS | 40.0% | |
GGTCGGATATTACTAGGATT+TGG | + | chr4.3:23211106-23211125 | MS.gene052538:CDS | 40.0% | |
GGTGTATCGGAAGAAAAACT+TGG | + | chr4.3:23210871-23210890 | MS.gene052538:CDS | 40.0% | |
GTTTACATCGTCCTTGTACT+TGG | + | chr4.3:23210943-23210962 | MS.gene052538:CDS | 40.0% | |
TGTTGACCATGATGGTAAAG+GGG | + | chr4.3:23213473-23213492 | MS.gene052538:CDS | 40.0% | |
TTTGGATGTTGATCGTTGGT+CGG | + | chr4.3:23211089-23211108 | MS.gene052538:CDS | 40.0% | |
TTTGTATCGGAACTTAGCAG+TGG | - | chr4.3:23212048-23212067 | None:intergenic | 40.0% | |
! | AAGTTTTCGACCAAACCTAC+GGG | - | chr4.3:23211005-23211024 | None:intergenic | 40.0% |
! | ACCACTTTGGTAATTCACCA+GGG | - | chr4.3:23213116-23213135 | None:intergenic | 40.0% |
! | AGCAGCATTTTCTTGGTCAT+GGG | + | chr4.3:23213173-23213192 | MS.gene052538:CDS | 40.0% |
! | ATTTCGCTAGCTTATCCATC+GGG | + | chr4.3:23212123-23212142 | MS.gene052538:intron | 40.0% |
! | GCATGGATTTTCTTTAGGTG+GGG | + | chr4.3:23210808-23210827 | MS.gene052538:intron | 40.0% |
! | GGAGCCAAATTTGGAATTGA+TGG | + | chr4.3:23213087-23213106 | MS.gene052538:CDS | 40.0% |
! | TACCACTTTGGTAATTCACC+AGG | - | chr4.3:23213117-23213136 | None:intergenic | 40.0% |
! | TAGCAGCATTTTCTTGGTCA+TGG | + | chr4.3:23213172-23213191 | MS.gene052538:CDS | 40.0% |
! | TCCAAACTCAAAGGTGGATT+AGG | + | chr4.3:23212456-23212475 | MS.gene052538:CDS | 40.0% |
! | TCCAAATTTGGCTCCAATAG+AGG | - | chr4.3:23213082-23213101 | None:intergenic | 40.0% |
! | TCCTAATCCACCTTTGAGTT+TGG | - | chr4.3:23212460-23212479 | None:intergenic | 40.0% |
! | TTTGGAATTGATGGAAACCC+TGG | + | chr4.3:23213096-23213115 | MS.gene052538:CDS | 40.0% |
! | TTTTTCTTCCGATACACCGA+TGG | - | chr4.3:23210869-23210888 | None:intergenic | 40.0% |
!! | AACTCAAAGGTGGATTAGGA+TGG | + | chr4.3:23212460-23212479 | MS.gene052538:CDS | 40.0% |
!! | CCTGTGCTATTTAGTTCTGT+TGG | + | chr4.3:23212798-23212817 | MS.gene052538:CDS | 40.0% |
!! | CTTGGAGGAATTTGTTGCAA+AGG | + | chr4.3:23212691-23212710 | MS.gene052538:CDS | 40.0% |
!! | TTGAATTAGGAGTGTCTGGA+AGG | - | chr4.3:23212545-23212564 | None:intergenic | 40.0% |
!! | TTGTAGTTGATAGGTTGGGT+AGG | + | chr4.3:23212898-23212917 | MS.gene052538:CDS | 40.0% |
ACCCTGGTGAATTACCAAAG+TGG | + | chr4.3:23213112-23213131 | MS.gene052538:CDS | 45.0% | |
ACCTTGCCCATCTCTTCAAT+TGG | - | chr4.3:23213423-23213442 | None:intergenic | 45.0% | |
ATGCTTCACTAGCTGCTACA+AGG | - | chr4.3:23212653-23212672 | None:intergenic | 45.0% | |
ATTGGAGTTGCTGCCTCTAT+TGG | + | chr4.3:23213066-23213085 | MS.gene052538:CDS | 45.0% | |
CAAACTTCATGTGACAGAGC+AGG | - | chr4.3:23213320-23213339 | None:intergenic | 45.0% | |
CACGTTTGGATGTTGATCGT+TGG | + | chr4.3:23211085-23211104 | MS.gene052538:CDS | 45.0% | |
CAGTTATCACAGAGGACATG+AGG | - | chr4.3:23212842-23212861 | None:intergenic | 45.0% | |
CATCAACATCTTCGACTCCA+CGG | - | chr4.3:23212617-23212636 | None:intergenic | 45.0% | |
CGATCAACATCCAAACGTGT+TGG | - | chr4.3:23211084-23211103 | None:intergenic | 45.0% | |
CTCATGTCCTCTGTGATAAC+TGG | + | chr4.3:23212840-23212859 | MS.gene052538:CDS | 45.0% | |
CTGCTCTGTCACATGAAGTT+TGG | + | chr4.3:23213318-23213337 | MS.gene052538:CDS | 45.0% | |
GAACCAAATCTGCCATGACT+TGG | + | chr4.3:23211217-23211236 | MS.gene052538:intron | 45.0% | |
GCATGCAAGTGGAAAATCCT+TGG | + | chr4.3:23212673-23212692 | MS.gene052538:CDS | 45.0% | |
GCCATCTCAGAGAGGTAAAT+TGG | - | chr4.3:23212345-23212364 | None:intergenic | 45.0% | |
GCCTCTATTGGAGCCAAATT+TGG | + | chr4.3:23213078-23213097 | MS.gene052538:CDS | 45.0% | |
GCTCATCTTAAGAGAATCCG+TGG | + | chr4.3:23212597-23212616 | MS.gene052538:CDS | 45.0% | |
GGGCATTCCAATTGAAGAGA+TGG | + | chr4.3:23213413-23213432 | MS.gene052538:CDS | 45.0% | |
TAGTGAAGCATGCATGCAAG+TGG | + | chr4.3:23212662-23212681 | MS.gene052538:CDS | 45.0% | |
TCCAATTGAAGAGATGGGCA+AGG | + | chr4.3:23213419-23213438 | MS.gene052538:CDS | 45.0% | |
TGCAAGTGGAAAATCCTTGG+AGG | + | chr4.3:23212676-23212695 | MS.gene052538:CDS | 45.0% | |
TTGAAGAGATGGGCAAGGTT+TGG | + | chr4.3:23213424-23213443 | MS.gene052538:CDS | 45.0% | |
TTGGGCGAAGCCATTAACAA+GGG | - | chr4.3:23211065-23211084 | None:intergenic | 45.0% | |
TTGTCACCAACCAACCAAGA+GGG | - | chr4.3:23213200-23213219 | None:intergenic | 45.0% | |
! | AAAGGGGATGGACTTGAGAT+GGG | + | chr4.3:23213489-23213508 | MS.gene052538:CDS | 45.0% |
! | ACGTGTAAAGTTGGTCCATG+CGG | + | chr4.3:23210669-23210688 | MS.gene052538:intron | 45.0% |
! | AGAGCCCTTTTTCTTGAAGG+TGG | + | chr4.3:23212921-23212940 | MS.gene052538:CDS | 45.0% |
! | AGGAGAGCCCTTTTTCTTGA+AGG | + | chr4.3:23212918-23212937 | MS.gene052538:CDS | 45.0% |
! | CTCATTGGTGCCCTTGTTAA+TGG | + | chr4.3:23211052-23211071 | MS.gene052538:CDS | 45.0% |
! | GCAGCATTTTCTTGGTCATG+GGG | + | chr4.3:23213174-23213193 | MS.gene052538:CDS | 45.0% |
! | GCCAATTTACCTCTCTGAGA+TGG | + | chr4.3:23212341-23212360 | MS.gene052538:CDS | 45.0% |
! | GTTAAGTTTGGGTGGTGCTA+TGG | + | chr4.3:23212485-23212504 | MS.gene052538:CDS | 45.0% |
! | TAAAGGGGATGGACTTGAGA+TGG | + | chr4.3:23213488-23213507 | MS.gene052538:CDS | 45.0% |
!! | CATTAACAAGGGCACCAATG+AGG | - | chr4.3:23211054-23211073 | None:intergenic | 45.0% |
!! | TACAGAGGAGCTCTAAGTGT+TGG | + | chr4.3:23212375-23212394 | MS.gene052538:CDS | 45.0% |
!! | TCAAAGGTGGATTAGGATGG+AGG | + | chr4.3:23212463-23212482 | MS.gene052538:CDS | 45.0% |
ACAAAAGGAGTGAGGTTGCC+AGG | - | chr4.3:23210535-23210554 | None:intergenic | 50.0% | |
ACAACGATATCACAGCCGCA+TGG | - | chr4.3:23210687-23210706 | None:intergenic | 50.0% | |
AGAGATGGGCAAGGTTTGGA+AGG | + | chr4.3:23213428-23213447 | MS.gene052538:CDS | 50.0% | |
CAAAAGGAGTGAGGTTGCCA+GGG | - | chr4.3:23210534-23210553 | None:intergenic | 50.0% | |
CTTGTCACCAACCAACCAAG+AGG | - | chr4.3:23213201-23213220 | None:intergenic | 50.0% | |
GACCATGATGGTAAAGGGGA+TGG | + | chr4.3:23213477-23213496 | MS.gene052538:CDS | 50.0% | |
GAGATGGGCAAGGTTTGGAA+GGG | + | chr4.3:23213429-23213448 | MS.gene052538:CDS | 50.0% | |
GGATGGAGGTTAAGTTTGGG+TGG | + | chr4.3:23212477-23212496 | MS.gene052538:CDS | 50.0% | |
GTCCATCCCCTTTACCATCA+TGG | - | chr4.3:23213482-23213501 | None:intergenic | 50.0% | |
GTTGGGCGAAGCCATTAACA+AGG | - | chr4.3:23211066-23211085 | None:intergenic | 50.0% | |
TATAGGGAGCCATCTCAGAG+AGG | - | chr4.3:23212353-23212372 | None:intergenic | 50.0% | |
TGCATTGTTGCAGCAATGGG+AGG | + | chr4.3:23210565-23210584 | MS.gene052538:CDS | 50.0% | |
TTTGGAAGGGACACCCATAC+TGG | + | chr4.3:23213442-23213461 | MS.gene052538:CDS | 50.0% | |
! | GTACTCCTTGTTGCTTCCAC+CGG | - | chr4.3:23210512-23210531 | None:intergenic | 50.0% |
ATCGAACGTGGTGATCGCGA+TGG | + | chr4.3:23212567-23212586 | MS.gene052538:CDS | 55.0% | |
ATGGCTTCGCCCAACACGTT+TGG | + | chr4.3:23211071-23211090 | MS.gene052538:CDS | 55.0% | |
CCTGCAGTAGGAATACCCAC+CGG | + | chr4.3:23210490-23210509 | MS.gene052538:CDS | 55.0% | |
GCAGCCGATCGAATCTCCAA+TGG | - | chr4.3:23213234-23213253 | None:intergenic | 55.0% | |
TCGAGTGTCACCCGTAGGTT+TGG | + | chr4.3:23210992-23211011 | MS.gene052538:CDS | 55.0% | |
TTTAGGTGGGGTGACGTCGA+TGG | + | chr4.3:23210820-23210839 | MS.gene052538:intron | 55.0% | |
! | GGGATGGACTTGAGATGGGA+AGG | + | chr4.3:23213493-23213512 | MS.gene052538:CDS | 55.0% |
! | TCCTTGTTGCTTCCACCGGT+GGG | - | chr4.3:23210508-23210527 | None:intergenic | 55.0% |
!! | GGAAGCAACAAGGAGTACCC+TGG | + | chr4.3:23210514-23210533 | MS.gene052538:CDS | 55.0% |
ACCCACCGGTGGAAGCAACA+AGG | + | chr4.3:23210504-23210523 | MS.gene052538:CDS | 60.0% | |
ATGGGGCCCTCTTGGTTGGT+TGG | + | chr4.3:23213191-23213210 | MS.gene052538:CDS | 60.0% | |
CACCAGCGAAGACAGCAACG+CGG | - | chr4.3:23210969-23210988 | None:intergenic | 60.0% | |
CAGCAACGCGGCCAAGTACA+AGG | - | chr4.3:23210957-23210976 | None:intergenic | 60.0% | |
CCGGTGGGTATTCCTACTGC+AGG | - | chr4.3:23210493-23210512 | None:intergenic | 60.0% | |
GCAGTAGGAATACCCACCGG+TGG | + | chr4.3:23210493-23210512 | MS.gene052538:CDS | 60.0% | |
TCTTGGTCATGGGGCCCTCT+TGG | + | chr4.3:23213183-23213202 | MS.gene052538:CDS | 60.0% | |
TGGTGATCGCGATGGAGCCA+AGG | + | chr4.3:23212575-23212594 | MS.gene052538:CDS | 60.0% | |
! | CTCCTTGTTGCTTCCACCGG+TGG | - | chr4.3:23210509-23210528 | None:intergenic | 60.0% |
CGCGTTGCTGTCTTCGCTGG+TGG | + | chr4.3:23210967-23210986 | MS.gene052538:CDS | 65.0% | |
GGTCATGGGGCCCTCTTGGT+TGG | + | chr4.3:23213187-23213206 | MS.gene052538:CDS | 65.0% | |
! | TGGCGTCGAGTGTCACCCGT+AGG | + | chr4.3:23210987-23211006 | MS.gene052538:CDS | 65.0% |
GGCCGCGTTGCTGTCTTCGC+TGG | + | chr4.3:23210964-23210983 | MS.gene052538:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 23210487 | 23213524 | 23210487 | ID=MS.gene052538 |
chr4.3 | mRNA | 23210487 | 23213524 | 23210487 | ID=MS.gene052538.t1;Parent=MS.gene052538 |
chr4.3 | exon | 23210487 | 23210619 | 23210487 | ID=MS.gene052538.t1.exon1;Parent=MS.gene052538.t1 |
chr4.3 | CDS | 23210487 | 23210619 | 23210487 | ID=cds.MS.gene052538.t1;Parent=MS.gene052538.t1 |
chr4.3 | exon | 23210825 | 23211147 | 23210825 | ID=MS.gene052538.t1.exon2;Parent=MS.gene052538.t1 |
chr4.3 | CDS | 23210825 | 23211147 | 23210825 | ID=cds.MS.gene052538.t1;Parent=MS.gene052538.t1 |
chr4.3 | exon | 23212336 | 23212965 | 23212336 | ID=MS.gene052538.t1.exon3;Parent=MS.gene052538.t1 |
chr4.3 | CDS | 23212336 | 23212965 | 23212336 | ID=cds.MS.gene052538.t1;Parent=MS.gene052538.t1 |
chr4.3 | exon | 23213066 | 23213524 | 23213066 | ID=MS.gene052538.t1.exon4;Parent=MS.gene052538.t1 |
chr4.3 | CDS | 23213066 | 23213524 | 23213066 | ID=cds.MS.gene052538.t1;Parent=MS.gene052538.t1 |
Gene Sequence |
Protein sequence |