Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28482.t1 | XP_003629474.1 | 93.6 | 501 | 7 | 1 | 1 | 476 | 1 | 501 | 5.70E-252 | 879.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28482.t1 | Q8GXR2 | 63.9 | 479 | 146 | 2 | 16 | 467 | 14 | 492 | 1.2e-165 | 584.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28482.t1 | G7LEU7 | 93.6 | 501 | 7 | 1 | 1 | 476 | 1 | 501 | 4.1e-252 | 879.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene28482 | 0.819731 | 9.96E-53 | -1.69E-46 |
MS.gene056480 | MS.gene28482 | 0.806346 | 8.60E-50 | -1.69E-46 |
MS.gene057869 | MS.gene28482 | 0.803825 | 2.90E-49 | -1.69E-46 |
MS.gene058595 | MS.gene28482 | 0.804694 | 1.91E-49 | -1.69E-46 |
MS.gene059439 | MS.gene28482 | 0.808876 | 2.50E-50 | -1.69E-46 |
MS.gene060998 | MS.gene28482 | 0.804385 | 2.22E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28482.t1 | MTR_8g077890 | 93.613 | 501 | 7 | 1 | 1 | 476 | 1 | 501 | 0.0 | 936 |
MS.gene28482.t1 | MTR_5g075300 | 78.600 | 500 | 81 | 2 | 1 | 474 | 1 | 500 | 0.0 | 802 |
MS.gene28482.t1 | MTR_4g069500 | 57.113 | 485 | 181 | 3 | 16 | 474 | 27 | 510 | 0.0 | 551 |
MS.gene28482.t1 | MTR_3g116240 | 57.203 | 479 | 177 | 4 | 7 | 459 | 17 | 493 | 0.0 | 539 |
MS.gene28482.t1 | MTR_4g072030 | 56.652 | 466 | 176 | 2 | 16 | 457 | 24 | 487 | 0.0 | 530 |
MS.gene28482.t1 | MTR_4g069500 | 56.182 | 461 | 175 | 3 | 40 | 474 | 1 | 460 | 1.76e-180 | 514 |
MS.gene28482.t1 | MTR_5g019870 | 52.083 | 480 | 204 | 2 | 11 | 464 | 7 | 486 | 5.82e-170 | 488 |
MS.gene28482.t1 | MTR_6g088450 | 49.356 | 466 | 202 | 2 | 8 | 449 | 47 | 502 | 2.72e-153 | 446 |
MS.gene28482.t1 | MTR_8g103500 | 48.548 | 482 | 215 | 4 | 2 | 459 | 1 | 473 | 7.44e-149 | 434 |
MS.gene28482.t1 | MTR_2g013310 | 45.361 | 485 | 226 | 5 | 16 | 476 | 50 | 519 | 2.83e-139 | 410 |
MS.gene28482.t1 | MTR_7g446340 | 42.485 | 499 | 248 | 5 | 2 | 476 | 38 | 521 | 2.69e-138 | 408 |
MS.gene28482.t1 | MTR_6g007340 | 42.485 | 499 | 248 | 5 | 2 | 476 | 38 | 521 | 2.69e-138 | 408 |
MS.gene28482.t1 | MTR_2g013310 | 44.902 | 461 | 215 | 6 | 40 | 476 | 1 | 446 | 7.67e-129 | 381 |
MS.gene28482.t1 | MTR_4g069500 | 56.308 | 325 | 136 | 3 | 152 | 474 | 1 | 321 | 5.64e-128 | 375 |
MS.gene28482.t1 | MTR_3g084110 | 31.743 | 482 | 274 | 9 | 16 | 465 | 25 | 483 | 5.26e-66 | 221 |
MS.gene28482.t1 | MTR_1g116650 | 31.276 | 486 | 273 | 7 | 9 | 465 | 67 | 520 | 2.17e-64 | 217 |
MS.gene28482.t1 | MTR_1g116660 | 32.773 | 476 | 273 | 7 | 16 | 463 | 32 | 488 | 2.58e-63 | 214 |
MS.gene28482.t1 | MTR_7g005910 | 30.658 | 486 | 291 | 8 | 8 | 465 | 20 | 487 | 1.19e-62 | 212 |
MS.gene28482.t1 | MTR_4g077740 | 27.778 | 486 | 303 | 8 | 5 | 454 | 24 | 497 | 1.28e-53 | 187 |
MS.gene28482.t1 | MTR_3g074410 | 28.854 | 506 | 275 | 12 | 12 | 460 | 15 | 492 | 1.74e-52 | 185 |
MS.gene28482.t1 | MTR_6g018790 | 30.968 | 465 | 264 | 9 | 25 | 461 | 111 | 546 | 3.73e-52 | 185 |
MS.gene28482.t1 | MTR_7g082270 | 30.835 | 467 | 262 | 10 | 25 | 461 | 71 | 506 | 2.68e-50 | 179 |
MS.gene28482.t1 | MTR_1g022315 | 27.451 | 459 | 290 | 8 | 21 | 457 | 51 | 488 | 1.07e-49 | 177 |
MS.gene28482.t1 | MTR_5g020270 | 28.665 | 457 | 284 | 8 | 22 | 457 | 53 | 488 | 4.41e-49 | 175 |
MS.gene28482.t1 | MTR_8g077310 | 28.665 | 457 | 278 | 10 | 22 | 454 | 50 | 482 | 2.36e-48 | 173 |
MS.gene28482.t1 | MTR_0009s0370 | 31.746 | 441 | 248 | 9 | 65 | 474 | 88 | 506 | 2.09e-47 | 171 |
MS.gene28482.t1 | MTR_4g118610 | 30.180 | 444 | 260 | 11 | 34 | 454 | 67 | 483 | 8.56e-47 | 169 |
MS.gene28482.t1 | MTR_2g020710 | 30.445 | 427 | 255 | 10 | 47 | 454 | 77 | 480 | 6.02e-46 | 167 |
MS.gene28482.t1 | MTR_5g077580 | 27.106 | 546 | 284 | 9 | 16 | 461 | 23 | 554 | 2.65e-45 | 166 |
MS.gene28482.t1 | MTR_5g041550 | 28.150 | 508 | 293 | 12 | 3 | 460 | 8 | 493 | 6.59e-45 | 164 |
MS.gene28482.t1 | MTR_5g020270 | 29.584 | 409 | 246 | 8 | 70 | 457 | 1 | 388 | 7.47e-45 | 161 |
MS.gene28482.t1 | MTR_3g008160 | 28.106 | 491 | 283 | 12 | 24 | 466 | 28 | 496 | 9.11e-45 | 164 |
MS.gene28482.t1 | MTR_3g008170 | 28.487 | 509 | 294 | 11 | 7 | 464 | 11 | 500 | 1.19e-44 | 164 |
MS.gene28482.t1 | MTR_3g023480 | 29.858 | 422 | 248 | 7 | 67 | 460 | 90 | 491 | 3.68e-44 | 162 |
MS.gene28482.t1 | MTR_3g008160 | 28.837 | 430 | 256 | 9 | 65 | 466 | 40 | 447 | 4.61e-44 | 161 |
MS.gene28482.t1 | MTR_8g077300 | 26.724 | 464 | 296 | 9 | 18 | 459 | 38 | 479 | 6.80e-44 | 161 |
MS.gene28482.t1 | MTR_2g020710 | 30.732 | 410 | 242 | 10 | 64 | 454 | 5 | 391 | 1.11e-43 | 159 |
MS.gene28482.t1 | MTR_1g022315 | 27.561 | 410 | 254 | 8 | 70 | 457 | 1 | 389 | 1.65e-43 | 158 |
MS.gene28482.t1 | MTR_8g077310 | 29.095 | 409 | 242 | 10 | 70 | 454 | 1 | 385 | 2.68e-43 | 157 |
MS.gene28482.t1 | MTR_7g113960 | 27.778 | 468 | 291 | 9 | 30 | 476 | 38 | 479 | 3.39e-43 | 159 |
MS.gene28482.t1 | MTR_7g094450 | 28.390 | 472 | 293 | 10 | 3 | 454 | 24 | 470 | 7.02e-43 | 158 |
MS.gene28482.t1 | MTR_3g074390 | 29.234 | 431 | 242 | 8 | 65 | 460 | 93 | 495 | 8.45e-43 | 159 |
MS.gene28482.t1 | MTR_3g093010 | 26.938 | 516 | 308 | 11 | 5 | 471 | 8 | 503 | 1.01e-42 | 158 |
MS.gene28482.t1 | MTR_5g006070 | 28.671 | 429 | 244 | 10 | 59 | 453 | 35 | 435 | 2.24e-42 | 157 |
MS.gene28482.t1 | MTR_3g007910 | 26.465 | 495 | 285 | 10 | 5 | 461 | 8 | 461 | 2.98e-42 | 156 |
MS.gene28482.t1 | MTR_5g006070 | 28.671 | 429 | 244 | 10 | 59 | 453 | 83 | 483 | 3.43e-42 | 157 |
MS.gene28482.t1 | MTR_2g049020 | 33.141 | 347 | 193 | 6 | 16 | 336 | 23 | 356 | 5.50e-42 | 157 |
MS.gene28482.t1 | MTR_2g049020 | 35.714 | 98 | 63 | 0 | 364 | 461 | 460 | 557 | 2.83e-13 | 72.4 |
MS.gene28482.t1 | MTR_3g093060 | 28.833 | 437 | 262 | 9 | 65 | 472 | 42 | 458 | 5.58e-42 | 155 |
MS.gene28482.t1 | MTR_7g113970 | 26.496 | 468 | 290 | 8 | 15 | 464 | 71 | 502 | 1.51e-41 | 155 |
MS.gene28482.t1 | MTR_4g090600 | 27.757 | 526 | 299 | 14 | 3 | 470 | 8 | 510 | 3.36e-41 | 154 |
MS.gene28482.t1 | MTR_8g102860 | 27.364 | 497 | 295 | 12 | 18 | 469 | 26 | 501 | 7.89e-41 | 153 |
MS.gene28482.t1 | MTR_3g080240 | 27.137 | 468 | 291 | 9 | 19 | 461 | 93 | 535 | 1.63e-40 | 152 |
MS.gene28482.t1 | MTR_5g020270 | 26.915 | 457 | 271 | 9 | 22 | 457 | 53 | 467 | 1.82e-40 | 151 |
MS.gene28482.t1 | MTR_0204s0020 | 26.946 | 501 | 303 | 12 | 8 | 466 | 9 | 488 | 2.91e-40 | 151 |
MS.gene28482.t1 | MTR_0204s0020 | 26.786 | 504 | 303 | 12 | 8 | 466 | 9 | 491 | 3.99e-40 | 151 |
MS.gene28482.t1 | MTR_4g091370 | 27.856 | 499 | 291 | 10 | 7 | 457 | 12 | 489 | 4.20e-40 | 151 |
MS.gene28482.t1 | MTR_2g048720 | 33.903 | 351 | 190 | 7 | 16 | 340 | 23 | 357 | 4.59e-40 | 152 |
MS.gene28482.t1 | MTR_8g102860 | 28.372 | 430 | 263 | 8 | 65 | 469 | 40 | 449 | 4.94e-40 | 150 |
MS.gene28482.t1 | MTR_3g074270 | 27.235 | 481 | 267 | 10 | 24 | 460 | 28 | 469 | 1.24e-39 | 149 |
MS.gene28482.t1 | MTR_1g104750 | 27.766 | 479 | 274 | 11 | 24 | 453 | 28 | 483 | 1.54e-39 | 149 |
MS.gene28482.t1 | MTR_7g094110 | 28.903 | 474 | 288 | 12 | 6 | 454 | 23 | 472 | 1.57e-39 | 149 |
MS.gene28482.t1 | MTR_7g082270 | 30.788 | 406 | 220 | 10 | 25 | 400 | 71 | 445 | 1.92e-39 | 149 |
MS.gene28482.t1 | MTR_1g038630 | 28.600 | 493 | 272 | 13 | 18 | 457 | 22 | 487 | 7.65e-39 | 147 |
MS.gene28482.t1 | MTR_1g104780 | 28.442 | 443 | 259 | 8 | 65 | 475 | 89 | 505 | 1.44e-38 | 147 |
MS.gene28482.t1 | MTR_6g087040 | 26.698 | 427 | 268 | 7 | 65 | 466 | 92 | 498 | 2.07e-38 | 146 |
MS.gene28482.t1 | MTR_6g088375 | 26.698 | 427 | 268 | 7 | 65 | 466 | 92 | 498 | 2.07e-38 | 146 |
MS.gene28482.t1 | MTR_1g038600 | 28.333 | 480 | 272 | 12 | 18 | 457 | 22 | 469 | 2.55e-38 | 146 |
MS.gene28482.t1 | MTR_1g104770 | 28.904 | 429 | 252 | 9 | 55 | 453 | 79 | 484 | 2.94e-38 | 146 |
MS.gene28482.t1 | MTR_0204s0040 | 25.896 | 502 | 305 | 11 | 4 | 460 | 14 | 493 | 1.49e-37 | 144 |
MS.gene28482.t1 | MTR_4g116770 | 25.896 | 502 | 305 | 11 | 4 | 460 | 210 | 689 | 1.09e-36 | 144 |
MS.gene28482.t1 | MTR_4g013205 | 28.976 | 459 | 270 | 14 | 24 | 455 | 41 | 470 | 2.23e-36 | 140 |
MS.gene28482.t1 | MTR_6g087910 | 27.893 | 484 | 288 | 12 | 1 | 455 | 33 | 484 | 3.08e-36 | 140 |
MS.gene28482.t1 | MTR_2g026160 | 29.301 | 372 | 218 | 8 | 7 | 345 | 10 | 369 | 1.53e-35 | 139 |
MS.gene28482.t1 | MTR_2g026160 | 37.143 | 105 | 66 | 0 | 355 | 459 | 454 | 558 | 1.78e-15 | 79.3 |
MS.gene28482.t1 | MTR_4g116790 | 25.397 | 504 | 309 | 11 | 2 | 460 | 10 | 491 | 1.09e-34 | 136 |
MS.gene28482.t1 | MTR_5g094760 | 27.049 | 488 | 289 | 12 | 18 | 460 | 26 | 491 | 7.57e-34 | 134 |
MS.gene28482.t1 | MTR_7g091690 | 26.130 | 509 | 311 | 11 | 2 | 466 | 10 | 497 | 9.85e-34 | 133 |
MS.gene28482.t1 | MTR_5g082540 | 26.157 | 497 | 279 | 15 | 18 | 457 | 22 | 487 | 7.65e-33 | 130 |
MS.gene28482.t1 | MTR_2g020710 | 29.213 | 356 | 211 | 9 | 47 | 383 | 77 | 410 | 8.39e-33 | 129 |
MS.gene28482.t1 | MTR_2g020710 | 29.296 | 355 | 210 | 9 | 47 | 382 | 77 | 409 | 1.88e-32 | 128 |
MS.gene28482.t1 | MTR_8g077310 | 28.448 | 348 | 206 | 7 | 22 | 347 | 50 | 376 | 5.74e-32 | 127 |
MS.gene28482.t1 | MTR_4g118610 | 28.534 | 382 | 224 | 10 | 25 | 383 | 58 | 413 | 7.04e-32 | 127 |
MS.gene28482.t1 | MTR_3g074370 | 30.395 | 329 | 185 | 10 | 159 | 471 | 37 | 337 | 2.02e-30 | 121 |
MS.gene28482.t1 | MTR_3g074340 | 30.794 | 315 | 177 | 9 | 159 | 460 | 37 | 323 | 3.12e-30 | 120 |
MS.gene28482.t1 | MTR_3g074320 | 30.476 | 315 | 178 | 9 | 159 | 460 | 37 | 323 | 8.66e-30 | 119 |
MS.gene28482.t1 | MTR_7g094110 | 26.907 | 472 | 280 | 11 | 6 | 454 | 23 | 452 | 1.15e-29 | 121 |
MS.gene28482.t1 | MTR_2g026140 | 27.809 | 356 | 221 | 10 | 7 | 341 | 10 | 350 | 9.06e-29 | 119 |
MS.gene28482.t1 | MTR_2g026140 | 35.238 | 105 | 68 | 0 | 355 | 459 | 439 | 543 | 2.18e-11 | 66.6 |
MS.gene28482.t1 | MTR_4g064820 | 27.869 | 366 | 223 | 8 | 7 | 336 | 80 | 440 | 1.17e-27 | 115 |
MS.gene28482.t1 | MTR_3g074380 | 26.836 | 354 | 199 | 8 | 24 | 336 | 31 | 365 | 7.03e-26 | 108 |
MS.gene28482.t1 | MTR_2g020710 | 28.435 | 313 | 184 | 8 | 47 | 340 | 77 | 368 | 2.07e-25 | 107 |
MS.gene28482.t1 | MTR_3g116060 | 29.362 | 235 | 141 | 3 | 17 | 226 | 2 | 236 | 9.13e-25 | 108 |
MS.gene28482.t1 | MTR_3g116060 | 29.921 | 254 | 150 | 8 | 229 | 465 | 487 | 729 | 1.19e-20 | 95.9 |
MS.gene28482.t1 | MTR_3g074400 | 27.885 | 416 | 237 | 10 | 65 | 451 | 39 | 420 | 2.33e-24 | 105 |
MS.gene28482.t1 | MTR_7g113960 | 27.246 | 334 | 202 | 6 | 30 | 344 | 38 | 349 | 4.49e-24 | 103 |
MS.gene28482.t1 | MTR_7g113970 | 25.000 | 348 | 209 | 6 | 15 | 344 | 71 | 384 | 3.12e-23 | 102 |
MS.gene28482.t1 | MTR_5g044910 | 26.068 | 234 | 146 | 4 | 23 | 229 | 8 | 241 | 2.05e-20 | 95.1 |
MS.gene28482.t1 | MTR_5g044910 | 30.303 | 231 | 127 | 5 | 239 | 451 | 487 | 701 | 2.76e-17 | 85.1 |
MS.gene28482.t1 | MTR_5g024740 | 27.350 | 234 | 143 | 4 | 23 | 229 | 8 | 241 | 7.58e-20 | 93.2 |
MS.gene28482.t1 | MTR_5g024740 | 27.530 | 247 | 146 | 7 | 222 | 451 | 473 | 703 | 2.25e-15 | 79.3 |
MS.gene28482.t1 | MTR_8g073100 | 27.723 | 202 | 118 | 5 | 23 | 197 | 8 | 208 | 9.81e-19 | 89.7 |
MS.gene28482.t1 | MTR_8g073100 | 27.027 | 222 | 146 | 4 | 239 | 451 | 485 | 699 | 5.12e-14 | 75.1 |
MS.gene28482.t1 | MTR_3g118530 | 28.319 | 226 | 131 | 6 | 30 | 226 | 15 | 238 | 1.12e-17 | 86.7 |
MS.gene28482.t1 | MTR_3g118530 | 26.339 | 224 | 145 | 5 | 239 | 451 | 507 | 721 | 1.19e-16 | 83.2 |
MS.gene28482.t1 | MTR_3g118530 | 29.592 | 196 | 108 | 5 | 30 | 197 | 15 | 208 | 1.58e-17 | 85.9 |
MS.gene28482.t1 | MTR_4g116790 | 21.978 | 364 | 221 | 7 | 2 | 322 | 10 | 353 | 4.42e-17 | 83.2 |
MS.gene28482.t1 | MTR_5g096000 | 29.508 | 183 | 122 | 4 | 5 | 183 | 8 | 187 | 1.74e-14 | 74.7 |
MS.gene28482.t1 | MTR_8g077130 | 73.333 | 45 | 11 | 1 | 193 | 236 | 38 | 82 | 1.45e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28482.t1 | AT4G36670 | 63.883 | 479 | 146 | 2 | 16 | 467 | 14 | 492 | 0.0 | 623 |
MS.gene28482.t1 | AT2G18480 | 66.385 | 473 | 134 | 2 | 9 | 457 | 12 | 483 | 0.0 | 605 |
MS.gene28482.t1 | AT3G18830 | 56.103 | 467 | 181 | 1 | 16 | 458 | 33 | 499 | 0.0 | 551 |
MS.gene28482.t1 | AT2G16120 | 53.157 | 491 | 204 | 3 | 7 | 471 | 14 | 504 | 0.0 | 522 |
MS.gene28482.t1 | AT2G16130 | 53.306 | 484 | 201 | 2 | 7 | 465 | 14 | 497 | 0.0 | 522 |
MS.gene28482.t1 | AT2G20780 | 42.656 | 497 | 244 | 4 | 4 | 476 | 40 | 519 | 1.12e-137 | 407 |
MS.gene28482.t1 | AT2G20780 | 42.232 | 457 | 223 | 4 | 44 | 476 | 22 | 461 | 4.21e-122 | 365 |
MS.gene28482.t1 | AT2G43330 | 30.608 | 477 | 285 | 7 | 16 | 464 | 28 | 486 | 6.91e-58 | 199 |
MS.gene28482.t1 | AT1G75220 | 29.694 | 458 | 280 | 6 | 21 | 457 | 50 | 486 | 2.92e-55 | 192 |
MS.gene28482.t1 | AT5G17010 | 33.090 | 411 | 235 | 7 | 69 | 454 | 104 | 499 | 4.38e-52 | 184 |
MS.gene28482.t1 | AT5G17010 | 33.090 | 411 | 235 | 7 | 69 | 454 | 104 | 499 | 4.38e-52 | 184 |
MS.gene28482.t1 | AT5G17010 | 33.090 | 411 | 235 | 7 | 69 | 454 | 104 | 499 | 4.38e-52 | 184 |
MS.gene28482.t1 | AT5G16150 | 31.670 | 461 | 262 | 8 | 25 | 459 | 111 | 544 | 8.95e-52 | 184 |
MS.gene28482.t1 | AT5G16150 | 31.670 | 461 | 262 | 8 | 25 | 459 | 111 | 544 | 8.95e-52 | 184 |
MS.gene28482.t1 | AT5G16150 | 31.670 | 461 | 262 | 8 | 25 | 459 | 111 | 544 | 8.95e-52 | 184 |
MS.gene28482.t1 | AT3G03090 | 32.151 | 451 | 263 | 11 | 34 | 454 | 62 | 499 | 1.99e-51 | 182 |
MS.gene28482.t1 | AT5G27350 | 28.908 | 467 | 287 | 7 | 21 | 465 | 29 | 472 | 2.02e-50 | 179 |
MS.gene28482.t1 | AT3G05160 | 28.125 | 480 | 294 | 8 | 1 | 458 | 5 | 455 | 6.40e-50 | 177 |
MS.gene28482.t1 | AT1G19450 | 28.633 | 461 | 283 | 7 | 20 | 457 | 50 | 487 | 8.95e-50 | 177 |
MS.gene28482.t1 | AT5G26250 | 28.773 | 497 | 291 | 10 | 1 | 454 | 4 | 480 | 2.29e-49 | 176 |
MS.gene28482.t1 | AT3G05150 | 31.545 | 466 | 261 | 14 | 25 | 460 | 37 | 474 | 8.29e-49 | 174 |
MS.gene28482.t1 | AT5G27360 | 28.221 | 489 | 294 | 9 | 2 | 465 | 20 | 476 | 1.31e-48 | 174 |
MS.gene28482.t1 | AT5G18840 | 28.870 | 478 | 294 | 10 | 7 | 461 | 28 | 482 | 2.18e-48 | 173 |
MS.gene28482.t1 | AT3G05150 | 31.441 | 458 | 258 | 13 | 25 | 454 | 37 | 466 | 3.41e-48 | 172 |
MS.gene28482.t1 | AT3G05150 | 31.441 | 458 | 258 | 13 | 25 | 454 | 37 | 466 | 3.41e-48 | 172 |
MS.gene28482.t1 | AT5G59250 | 28.541 | 466 | 283 | 8 | 24 | 454 | 103 | 553 | 3.86e-48 | 174 |
MS.gene28482.t1 | AT5G27360 | 28.221 | 489 | 294 | 9 | 2 | 465 | 68 | 524 | 4.98e-48 | 173 |
MS.gene28482.t1 | AT1G11260 | 28.484 | 488 | 276 | 13 | 20 | 457 | 25 | 489 | 5.24e-47 | 170 |
MS.gene28482.t1 | AT3G05165 | 27.530 | 494 | 285 | 10 | 1 | 461 | 14 | 467 | 1.32e-46 | 168 |
MS.gene28482.t1 | AT3G05165 | 27.530 | 494 | 285 | 10 | 1 | 461 | 14 | 467 | 1.32e-46 | 168 |
MS.gene28482.t1 | AT3G05165 | 27.530 | 494 | 285 | 10 | 1 | 461 | 14 | 467 | 1.32e-46 | 168 |
MS.gene28482.t1 | AT3G05960 | 30.021 | 473 | 282 | 13 | 18 | 454 | 20 | 479 | 5.67e-46 | 167 |
MS.gene28482.t1 | AT1G50310 | 26.978 | 493 | 285 | 12 | 24 | 465 | 30 | 498 | 1.92e-45 | 166 |
MS.gene28482.t1 | AT3G05160 | 28.505 | 428 | 265 | 6 | 49 | 458 | 2 | 406 | 4.41e-44 | 160 |
MS.gene28482.t1 | AT3G05160 | 28.505 | 428 | 265 | 6 | 49 | 458 | 2 | 406 | 4.41e-44 | 160 |
MS.gene28482.t1 | AT3G19930 | 29.040 | 427 | 242 | 9 | 65 | 457 | 88 | 487 | 1.56e-43 | 160 |
MS.gene28482.t1 | AT3G19930 | 29.040 | 427 | 242 | 9 | 65 | 457 | 88 | 487 | 1.56e-43 | 160 |
MS.gene28482.t1 | AT1G54730 | 28.785 | 469 | 287 | 11 | 7 | 454 | 20 | 462 | 1.86e-43 | 159 |
MS.gene28482.t1 | AT4G02050 | 28.175 | 504 | 293 | 12 | 9 | 466 | 17 | 497 | 3.09e-43 | 160 |
MS.gene28482.t1 | AT4G02050 | 28.175 | 504 | 293 | 12 | 9 | 466 | 17 | 497 | 3.09e-43 | 160 |
MS.gene28482.t1 | AT3G19940 | 27.926 | 487 | 277 | 11 | 24 | 460 | 30 | 492 | 3.80e-43 | 160 |
MS.gene28482.t1 | AT1G08900 | 27.423 | 485 | 287 | 12 | 7 | 461 | 13 | 462 | 4.24e-43 | 159 |
MS.gene28482.t1 | AT1G08900 | 27.423 | 485 | 287 | 12 | 7 | 461 | 13 | 462 | 4.24e-43 | 159 |
MS.gene28482.t1 | AT1G08900 | 28.315 | 445 | 254 | 12 | 47 | 461 | 11 | 420 | 1.35e-42 | 156 |
MS.gene28482.t1 | AT1G08900 | 28.315 | 445 | 254 | 12 | 47 | 461 | 45 | 454 | 1.57e-42 | 157 |
MS.gene28482.t1 | AT1G30220 | 35.795 | 352 | 177 | 9 | 16 | 336 | 25 | 358 | 2.66e-42 | 158 |
MS.gene28482.t1 | AT1G30220 | 37.755 | 98 | 61 | 0 | 364 | 461 | 463 | 560 | 3.84e-15 | 78.2 |
MS.gene28482.t1 | AT1G08930 | 27.778 | 468 | 293 | 13 | 7 | 454 | 46 | 488 | 7.35e-42 | 155 |
MS.gene28482.t1 | AT1G08930 | 27.778 | 468 | 293 | 13 | 7 | 454 | 46 | 488 | 7.35e-42 | 155 |
MS.gene28482.t1 | AT5G26340 | 28.247 | 485 | 280 | 11 | 24 | 460 | 28 | 492 | 7.63e-42 | 156 |
MS.gene28482.t1 | AT4G21480 | 27.455 | 499 | 295 | 11 | 6 | 457 | 9 | 487 | 1.35e-41 | 155 |
MS.gene28482.t1 | AT4G04750 | 27.828 | 442 | 264 | 10 | 47 | 462 | 64 | 476 | 3.23e-41 | 154 |
MS.gene28482.t1 | AT4G04750 | 27.828 | 442 | 264 | 10 | 47 | 462 | 64 | 476 | 3.23e-41 | 154 |
MS.gene28482.t1 | AT1G77210 | 27.723 | 505 | 287 | 13 | 18 | 471 | 26 | 503 | 5.60e-41 | 154 |
MS.gene28482.t1 | AT1G77210 | 27.723 | 505 | 287 | 13 | 18 | 471 | 26 | 503 | 5.60e-41 | 154 |
MS.gene28482.t1 | AT4G04750 | 27.828 | 442 | 264 | 10 | 47 | 462 | 108 | 520 | 7.09e-41 | 154 |
MS.gene28482.t1 | AT5G23270 | 27.413 | 518 | 286 | 14 | 2 | 460 | 7 | 493 | 8.93e-41 | 153 |
MS.gene28482.t1 | AT1G05030 | 28.000 | 475 | 280 | 11 | 19 | 462 | 79 | 522 | 7.77e-40 | 150 |
MS.gene28482.t1 | AT1G67300 | 29.209 | 493 | 285 | 13 | 1 | 460 | 32 | 493 | 1.34e-38 | 147 |
MS.gene28482.t1 | AT1G08890 | 27.692 | 455 | 274 | 11 | 25 | 454 | 33 | 457 | 2.42e-38 | 145 |
MS.gene28482.t1 | AT1G67300 | 28.947 | 494 | 284 | 14 | 1 | 460 | 32 | 492 | 2.58e-38 | 146 |
MS.gene28482.t1 | AT1G67300 | 28.947 | 494 | 284 | 14 | 1 | 460 | 32 | 492 | 2.58e-38 | 146 |
MS.gene28482.t1 | AT5G61520 | 26.112 | 517 | 302 | 14 | 1 | 460 | 1 | 494 | 3.24e-38 | 146 |
MS.gene28482.t1 | AT2G48020 | 27.824 | 478 | 282 | 12 | 6 | 456 | 19 | 460 | 3.90e-38 | 145 |
MS.gene28482.t1 | AT2G48020 | 27.824 | 478 | 282 | 12 | 6 | 456 | 19 | 460 | 3.90e-38 | 145 |
MS.gene28482.t1 | AT3G05165 | 26.423 | 492 | 278 | 10 | 1 | 459 | 14 | 454 | 1.39e-37 | 144 |
MS.gene28482.t1 | AT1G54730 | 28.638 | 426 | 258 | 10 | 7 | 411 | 20 | 420 | 2.37e-37 | 142 |
MS.gene28482.t1 | AT5G61520 | 26.728 | 434 | 268 | 8 | 65 | 471 | 47 | 457 | 5.41e-37 | 142 |
MS.gene28482.t1 | AT1G79820 | 29.436 | 479 | 278 | 14 | 6 | 455 | 41 | 488 | 1.49e-36 | 141 |
MS.gene28482.t1 | AT1G79820 | 29.436 | 479 | 278 | 14 | 6 | 455 | 41 | 488 | 1.49e-36 | 141 |
MS.gene28482.t1 | AT1G54730 | 27.505 | 469 | 272 | 12 | 7 | 454 | 20 | 441 | 2.00e-36 | 140 |
MS.gene28482.t1 | AT5G27360 | 27.889 | 398 | 240 | 7 | 89 | 465 | 1 | 372 | 2.25e-36 | 138 |
MS.gene28482.t1 | AT5G27360 | 27.889 | 398 | 240 | 7 | 89 | 465 | 1 | 372 | 2.25e-36 | 138 |
MS.gene28482.t1 | AT1G07340 | 27.651 | 481 | 278 | 12 | 20 | 453 | 24 | 481 | 2.41e-36 | 140 |
MS.gene28482.t1 | AT4G04760 | 25.268 | 467 | 286 | 9 | 18 | 460 | 43 | 470 | 4.19e-36 | 139 |
MS.gene28482.t1 | AT4G04760 | 25.459 | 436 | 275 | 7 | 49 | 460 | 2 | 411 | 5.39e-36 | 138 |
MS.gene28482.t1 | AT3G05155 | 26.338 | 467 | 296 | 7 | 8 | 454 | 17 | 455 | 7.36e-36 | 139 |
MS.gene28482.t1 | AT2G35740 | 31.792 | 346 | 198 | 9 | 18 | 336 | 25 | 359 | 7.90e-36 | 140 |
MS.gene28482.t1 | AT2G35740 | 37.363 | 91 | 57 | 0 | 364 | 454 | 466 | 556 | 1.39e-13 | 73.6 |
MS.gene28482.t1 | AT1G34580 | 27.366 | 486 | 284 | 11 | 24 | 460 | 29 | 494 | 1.60e-35 | 138 |
MS.gene28482.t1 | AT3G05165 | 27.336 | 428 | 239 | 9 | 1 | 395 | 14 | 402 | 1.60e-35 | 137 |
MS.gene28482.t1 | AT3G05165 | 27.336 | 428 | 239 | 9 | 1 | 395 | 14 | 402 | 1.60e-35 | 137 |
MS.gene28482.t1 | AT1G34580 | 28.235 | 425 | 257 | 8 | 65 | 460 | 39 | 444 | 4.03e-35 | 136 |
MS.gene28482.t1 | AT1G05030 | 27.253 | 455 | 269 | 11 | 39 | 462 | 47 | 470 | 9.04e-35 | 135 |
MS.gene28482.t1 | AT4G16480 | 30.303 | 363 | 212 | 8 | 5 | 336 | 8 | 360 | 9.53e-35 | 137 |
MS.gene28482.t1 | AT4G16480 | 37.363 | 91 | 57 | 0 | 364 | 454 | 467 | 557 | 2.58e-14 | 75.9 |
MS.gene28482.t1 | AT4G16480 | 30.303 | 363 | 212 | 8 | 5 | 336 | 8 | 360 | 9.53e-35 | 137 |
MS.gene28482.t1 | AT4G16480 | 37.363 | 91 | 57 | 0 | 364 | 454 | 467 | 557 | 2.58e-14 | 75.9 |
MS.gene28482.t1 | AT4G16480 | 30.303 | 363 | 212 | 8 | 5 | 336 | 8 | 360 | 9.53e-35 | 137 |
MS.gene28482.t1 | AT4G16480 | 37.363 | 91 | 57 | 0 | 364 | 454 | 467 | 557 | 2.58e-14 | 75.9 |
MS.gene28482.t1 | AT1G67300 | 29.263 | 434 | 240 | 14 | 1 | 400 | 32 | 432 | 1.32e-33 | 132 |
MS.gene28482.t1 | AT1G67300 | 29.263 | 434 | 240 | 14 | 1 | 400 | 32 | 432 | 1.32e-33 | 132 |
MS.gene28482.t1 | AT1G67300 | 29.647 | 425 | 232 | 14 | 1 | 391 | 32 | 423 | 2.22e-33 | 131 |
MS.gene28482.t1 | AT1G67300 | 29.647 | 425 | 232 | 14 | 1 | 391 | 32 | 423 | 2.22e-33 | 131 |
MS.gene28482.t1 | AT5G27360 | 27.229 | 415 | 246 | 8 | 2 | 391 | 20 | 403 | 2.82e-33 | 131 |
MS.gene28482.t1 | AT1G08900 | 26.790 | 433 | 257 | 10 | 7 | 411 | 13 | 413 | 3.39e-33 | 130 |
MS.gene28482.t1 | AT1G54730 | 28.894 | 398 | 237 | 10 | 7 | 383 | 20 | 392 | 6.76e-32 | 127 |
MS.gene28482.t1 | AT1G54730 | 28.894 | 398 | 237 | 10 | 7 | 383 | 20 | 392 | 6.76e-32 | 127 |
MS.gene28482.t1 | AT1G08920 | 25.630 | 476 | 305 | 12 | 8 | 459 | 17 | 467 | 1.04e-31 | 127 |
MS.gene28482.t1 | AT4G04760 | 24.468 | 470 | 283 | 10 | 18 | 460 | 43 | 467 | 5.31e-31 | 125 |
MS.gene28482.t1 | AT1G79820 | 29.454 | 421 | 243 | 12 | 6 | 400 | 41 | 433 | 8.44e-31 | 124 |
MS.gene28482.t1 | AT1G54730 | 26.995 | 426 | 244 | 11 | 7 | 411 | 20 | 399 | 2.40e-30 | 122 |
MS.gene28482.t1 | AT1G08920 | 25.466 | 483 | 304 | 13 | 8 | 459 | 17 | 474 | 2.76e-30 | 123 |
MS.gene28482.t1 | AT1G50310 | 26.503 | 366 | 214 | 10 | 131 | 465 | 14 | 355 | 4.38e-30 | 120 |
MS.gene28482.t1 | AT3G05400 | 23.355 | 471 | 317 | 8 | 8 | 459 | 16 | 461 | 5.90e-30 | 122 |
MS.gene28482.t1 | AT1G77210 | 27.394 | 376 | 216 | 9 | 127 | 471 | 5 | 354 | 5.40e-29 | 117 |
MS.gene28482.t1 | AT5G17010 | 28.224 | 411 | 191 | 9 | 69 | 454 | 105 | 436 | 4.93e-27 | 113 |
MS.gene28482.t1 | AT3G20460 | 23.457 | 486 | 305 | 14 | 4 | 459 | 40 | 488 | 8.87e-27 | 113 |
MS.gene28482.t1 | AT3G05400 | 22.669 | 472 | 301 | 9 | 7 | 459 | 15 | 441 | 1.21e-25 | 109 |
MS.gene28482.t1 | AT1G08920 | 25.234 | 428 | 272 | 11 | 8 | 411 | 17 | 420 | 1.97e-25 | 108 |
MS.gene28482.t1 | AT1G54730 | 27.456 | 397 | 223 | 12 | 7 | 383 | 20 | 371 | 5.27e-25 | 107 |
MS.gene28482.t1 | AT1G20840 | 28.340 | 247 | 146 | 5 | 17 | 236 | 2 | 244 | 3.68e-24 | 106 |
MS.gene28482.t1 | AT1G20840 | 28.295 | 258 | 157 | 6 | 229 | 471 | 489 | 733 | 3.33e-17 | 85.1 |
MS.gene28482.t1 | AT1G20840 | 28.340 | 247 | 146 | 5 | 17 | 236 | 2 | 244 | 3.68e-24 | 106 |
MS.gene28482.t1 | AT1G20840 | 28.295 | 258 | 157 | 6 | 229 | 471 | 489 | 733 | 3.33e-17 | 85.1 |
MS.gene28482.t1 | AT1G54730 | 27.761 | 335 | 201 | 8 | 7 | 322 | 20 | 332 | 3.50e-23 | 100 |
MS.gene28482.t1 | AT3G51490 | 26.693 | 251 | 142 | 7 | 23 | 233 | 8 | 256 | 1.41e-22 | 101 |
MS.gene28482.t1 | AT3G51490 | 30.350 | 257 | 154 | 8 | 224 | 467 | 486 | 730 | 5.43e-22 | 99.8 |
MS.gene28482.t1 | AT3G51490 | 26.693 | 251 | 142 | 7 | 23 | 233 | 8 | 256 | 1.48e-22 | 101 |
MS.gene28482.t1 | AT3G51490 | 30.242 | 248 | 158 | 6 | 224 | 467 | 486 | 722 | 4.83e-20 | 94.0 |
MS.gene28482.t1 | AT3G51490 | 30.350 | 257 | 154 | 8 | 224 | 467 | 436 | 680 | 5.05e-22 | 99.8 |
MS.gene28482.t1 | AT3G51490 | 28.866 | 194 | 102 | 5 | 76 | 233 | 13 | 206 | 9.37e-18 | 86.7 |
MS.gene28482.t1 | AT2G48020 | 26.882 | 372 | 213 | 10 | 6 | 350 | 19 | 358 | 5.09e-21 | 95.1 |
MS.gene28482.t1 | AT3G05155 | 25.223 | 337 | 205 | 6 | 8 | 324 | 17 | 326 | 7.68e-21 | 93.6 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.082 | 196 | 109 | 5 | 30 | 197 | 15 | 208 | 1.04e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 456 | 727 | 8.42e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.534 | 193 | 106 | 5 | 30 | 194 | 15 | 205 | 1.11e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 446 | 717 | 8.87e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.534 | 193 | 106 | 5 | 30 | 194 | 15 | 205 | 1.11e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 446 | 717 | 8.87e-20 | 93.2 |
MS.gene28482.t1 | AT4G35300 | 29.534 | 193 | 106 | 5 | 30 | 194 | 15 | 205 | 1.11e-20 | 95.9 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 446 | 717 | 8.87e-20 | 93.2 |
MS.gene28482.t1 | AT1G54730 | 27.575 | 301 | 181 | 7 | 7 | 288 | 20 | 302 | 6.08e-20 | 91.3 |
MS.gene28482.t1 | AT1G54730 | 27.575 | 301 | 181 | 7 | 7 | 288 | 20 | 302 | 6.08e-20 | 91.3 |
MS.gene28482.t1 | AT4G35300 | 27.336 | 289 | 180 | 7 | 183 | 458 | 259 | 530 | 1.12e-19 | 92.4 |
MS.gene28482.t1 | AT2G48020 | 26.087 | 345 | 198 | 9 | 6 | 325 | 19 | 331 | 3.07e-18 | 86.7 |
MS.gene28482.t1 | AT1G79820 | 29.439 | 214 | 123 | 6 | 6 | 193 | 41 | 252 | 9.52e-14 | 73.6 |
MS.gene28482.t1 | AT1G79820 | 33.113 | 151 | 91 | 3 | 308 | 455 | 297 | 440 | 4.75e-11 | 65.1 |
MS.gene28482.t1 | AT1G79820 | 33.113 | 151 | 91 | 3 | 308 | 455 | 235 | 378 | 7.52e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATGGTGTCCATTGTTTC+TGG | 0.176174 | 8.4:+28627764 | MS.gene28482:CDS |
TATGTTGCTTTCTTTAATAT+TGG | 0.219271 | 8.4:+28629973 | MS.gene28482:CDS |
AAAGCTTTGCCTTTAGTTTC+AGG | 0.224380 | 8.4:-28630210 | None:intergenic |
GTTGTTCATAAAGGAAGATT+TGG | 0.239451 | 8.4:+28628940 | MS.gene28482:CDS |
ATGTTGCTTTCTTTAATATT+GGG | 0.247224 | 8.4:+28629974 | MS.gene28482:CDS |
CATCCTTGGTGCAGGTCTAA+TGG | 0.255622 | 8.4:+28629096 | MS.gene28482:CDS |
AGCACTGGAGGAATGATTAT+TGG | 0.255900 | 8.4:+28629856 | MS.gene28482:CDS |
ACCATTAAAATCGCGTAGTT+TGG | 0.273263 | 8.4:-28629127 | None:intergenic |
GATTATTGGGCTTACGCTAT+TGG | 0.285439 | 8.4:+28629870 | MS.gene28482:CDS |
GTGTCCATTGTTTCTGGTTA+TGG | 0.292976 | 8.4:+28627770 | MS.gene28482:CDS |
GCTTTCTTTAATATTGGGCT+TGG | 0.305984 | 8.4:+28629979 | MS.gene28482:CDS |
GAACTATAAACCCAAGTAAT+AGG | 0.312160 | 8.4:-28630003 | None:intergenic |
CCGGAACTTTGTATTGGTAT+TGG | 0.317318 | 8.4:+28629256 | MS.gene28482:CDS |
AGGATTCTTAACCTCTTTAC+CGG | 0.321405 | 8.4:+28629237 | MS.gene28482:CDS |
ATCCTTGGTGCAGGTCTAAT+GGG | 0.322241 | 8.4:+28629097 | MS.gene28482:CDS |
TTGGGCTTGGGCCTATTACT+TGG | 0.331261 | 8.4:+28629992 | MS.gene28482:CDS |
ATTGGTATTGGAATCTTGTT+AGG | 0.334944 | 8.4:+28629268 | MS.gene28482:CDS |
AACTAAAGGCAAAGCTTTAG+AGG | 0.338165 | 8.4:+28630215 | MS.gene28482:CDS |
GCACTGGAGGAATGATTATT+GGG | 0.352513 | 8.4:+28629857 | MS.gene28482:CDS |
ATTATTGGGCTTACGCTATT+GGG | 0.354837 | 8.4:+28629871 | MS.gene28482:CDS |
CTCACCAAGGTGAAGGGGTT+TGG | 0.362291 | 8.4:+28629578 | MS.gene28482:CDS |
AGGCAAAGCTTTAGAGGAAA+TGG | 0.362549 | 8.4:+28630221 | MS.gene28482:CDS |
CATGGAAACAACAGCATTCA+TGG | 0.369966 | 8.4:-28630088 | None:intergenic |
CTTTCTTTAATATTGGGCTT+GGG | 0.375420 | 8.4:+28629980 | MS.gene28482:CDS |
GCCTCAATATTGTTCATCCT+TGG | 0.375575 | 8.4:+28629082 | MS.gene28482:CDS |
TTGTTCATAAAGGAAGATTT+GGG | 0.381071 | 8.4:+28628941 | MS.gene28482:CDS |
GGACACCATTGAAGCAACTA+TGG | 0.402346 | 8.4:-28627753 | None:intergenic |
TCTTTACCGGAACTTTGTAT+TGG | 0.405403 | 8.4:+28629250 | MS.gene28482:CDS |
TTGTGCCATAGTTGCTTCAA+TGG | 0.411172 | 8.4:+28627748 | MS.gene28482:CDS |
TGGGCTTGGGCCTATTACTT+GGG | 0.420201 | 8.4:+28629993 | MS.gene28482:CDS |
GATATTTCCTTTGAAGTTGA+GGG | 0.420965 | 8.4:+28630029 | MS.gene28482:CDS |
GGAAGATGTGTTTGTGGTGT+AGG | 0.426049 | 8.4:+28629151 | MS.gene28482:CDS |
TGGAGCAATGTTGTTCATAA+AGG | 0.432311 | 8.4:+28628931 | MS.gene28482:CDS |
GAAATTTCAGCTGAATAAAC+CGG | 0.433520 | 8.4:-28629199 | None:intergenic |
ATCTATAAAGCTATCACAAT+AGG | 0.446017 | 8.4:+28630123 | MS.gene28482:CDS |
TTGGTTATGCAAGGTCAATT+AGG | 0.450727 | 8.4:+28629424 | MS.gene28482:CDS |
CCAATACCAATACAAAGTTC+CGG | 0.459728 | 8.4:-28629256 | None:intergenic |
ACATACTAGACCTTCTGTAT+TGG | 0.463685 | 8.4:-28630297 | None:intergenic |
TTAAACCTATGTGCATTAGT+AGG | 0.465555 | 8.4:+28629001 | MS.gene28482:CDS |
ATTTCTTCTGCTTCATCAAG+AGG | 0.471846 | 8.4:+28629217 | MS.gene28482:CDS |
GGCCCATAAAACGTTTCCGT+TGG | 0.479020 | 8.4:-28629920 | None:intergenic |
TGGATGTTAATTGCCGCAGT+TGG | 0.480949 | 8.4:+28629637 | MS.gene28482:CDS |
GGATGTTAATTGCCGCAGTT+GGG | 0.482704 | 8.4:+28629638 | MS.gene28482:CDS |
ATATTGTTCATCCTTGGTGC+AGG | 0.483894 | 8.4:+28629088 | MS.gene28482:CDS |
TGTGTTTGTGGTGTAGGTGT+TGG | 0.486277 | 8.4:+28629157 | MS.gene28482:CDS |
GGTGCAGGTCTAATGGGGTA+TGG | 0.502064 | 8.4:+28629103 | MS.gene28482:CDS |
GGAAGAACCTCTGATTACAT+TGG | 0.503581 | 8.4:+28629037 | MS.gene28482:CDS |
CAAAACGCTACTACAAATGA+AGG | 0.504432 | 8.4:-28629370 | None:intergenic |
CCTTTGAAGTTGAGGGCACA+AGG | 0.507181 | 8.4:+28630036 | MS.gene28482:CDS |
AGATATTTCCTTTGAAGTTG+AGG | 0.507195 | 8.4:+28630028 | MS.gene28482:CDS |
GAAGAACCTCTGATTACATT+GGG | 0.508270 | 8.4:+28629038 | MS.gene28482:CDS |
ATCATCATGATAACAAATCA+AGG | 0.511062 | 8.4:+28627680 | None:intergenic |
TTACTTGCAACTATTGGAGT+AGG | 0.513606 | 8.4:+28629757 | MS.gene28482:CDS |
AATATTAAAGAAAGCAACAT+AGG | 0.515377 | 8.4:-28629971 | None:intergenic |
CATACGTTGCGGCGATGCTA+AGG | 0.516416 | 8.4:-28629948 | None:intergenic |
TTAGTAGGATCTTTAACAGC+AGG | 0.516794 | 8.4:+28629016 | MS.gene28482:CDS |
CAAAAGTCTCACCAAGGTGA+AGG | 0.519691 | 8.4:+28629571 | MS.gene28482:CDS |
AATACAAAGTTCCGGTAAAG+AGG | 0.522406 | 8.4:-28629248 | None:intergenic |
ATGGTTGGAAGATGTGTTTG+TGG | 0.525527 | 8.4:+28629145 | MS.gene28482:CDS |
TGCGGCGATGCTAAGGATCA+AGG | 0.529053 | 8.4:-28629941 | None:intergenic |
ACCAACCACCTTGGTGACTC+AGG | 0.530664 | 8.4:-28629406 | None:intergenic |
ATAGATTGAAATAAAAGTCA+TGG | 0.531568 | 8.4:-28630106 | None:intergenic |
AGGGCACAAGGAGCAAGTAT+TGG | 0.532018 | 8.4:+28630048 | MS.gene28482:CDS |
CTTTCCAAACCCCTTCACCT+TGG | 0.537035 | 8.4:-28629582 | None:intergenic |
TTAGATACTGGTGTTATGAG+TGG | 0.541644 | 8.4:+28628911 | MS.gene28482:intron |
AAAAGTCTCACCAAGGTGAA+GGG | 0.542978 | 8.4:+28629572 | MS.gene28482:CDS |
CTTTGCTCTTATGATAGCAC+CGG | 0.543480 | 8.4:+28629180 | MS.gene28482:CDS |
CCTTGTGCCCTCAACTTCAA+AGG | 0.544461 | 8.4:-28630036 | None:intergenic |
TATAAAGCTATCACAATAGG+TGG | 0.548135 | 8.4:+28630126 | MS.gene28482:CDS |
AGCTTTAGAGGAAATGGAGA+TGG | 0.549739 | 8.4:+28630227 | MS.gene28482:CDS |
AGCAACTATGGCACAAGCAA+AGG | 0.549760 | 8.4:-28627741 | None:intergenic |
CTTTGCCTTTAGTTTCAGGA+AGG | 0.554311 | 8.4:-28630206 | None:intergenic |
GACCAACGCCTTCTGTACGT+TGG | 0.561189 | 8.4:+28629617 | MS.gene28482:CDS |
AGAAGCAGAACTTCGTCTCA+AGG | 0.568665 | 8.4:+28629489 | MS.gene28482:CDS |
GCCTGAGTCACCAAGGTGGT+TGG | 0.573571 | 8.4:+28629405 | MS.gene28482:CDS |
TATCCACCACGGTCAAGCTA+AGG | 0.577471 | 8.4:-28629894 | None:intergenic |
ACACAACAAGAGGTTCTAGC+AGG | 0.599568 | 8.4:+28628974 | MS.gene28482:CDS |
AGAAATGGATCCAATACAGA+AGG | 0.599938 | 8.4:+28630287 | MS.gene28482:CDS |
CCAAGGTGGTTGGTTATGCA+AGG | 0.600557 | 8.4:+28629415 | MS.gene28482:CDS |
CCTTGCATAACCAACCACCT+TGG | 0.601505 | 8.4:-28629415 | None:intergenic |
ACCAAGGATGAACAATATTG+AGG | 0.606197 | 8.4:-28629083 | None:intergenic |
ATTAACATCCAACGTACAGA+AGG | 0.606833 | 8.4:-28629625 | None:intergenic |
TCCTTGGTGCAGGTCTAATG+GGG | 0.608348 | 8.4:+28629098 | MS.gene28482:CDS |
AAGATCCTACTAATGCACAT+AGG | 0.612414 | 8.4:-28629006 | None:intergenic |
GGGCCTTAGCTTGACCGTGG+TGG | 0.612776 | 8.4:+28629891 | MS.gene28482:CDS |
AAAGTCTCACCAAGGTGAAG+GGG | 0.615900 | 8.4:+28629573 | MS.gene28482:CDS |
AATCAGTGACACACAACAAG+AGG | 0.616657 | 8.4:+28628964 | MS.gene28482:CDS |
CGTACCATAACCAGAAACAA+TGG | 0.627128 | 8.4:-28627774 | None:intergenic |
TCCGTTGGATTTATCCACCA+CGG | 0.632136 | 8.4:-28629905 | None:intergenic |
ACCGTGGTGGATAAATCCAA+CGG | 0.647485 | 8.4:+28629904 | MS.gene28482:CDS |
TAACAATGCCTGAGTCACCA+AGG | 0.652487 | 8.4:+28629398 | MS.gene28482:CDS |
GCGACGCCCAATGTAATCAG+AGG | 0.660739 | 8.4:-28629044 | None:intergenic |
ATTGGGCCTTAGCTTGACCG+TGG | 0.664117 | 8.4:+28629888 | MS.gene28482:CDS |
ATCCAACGTACAGAAGGCGT+TGG | 0.670561 | 8.4:-28629619 | None:intergenic |
ACCCCATTAGACCTGCACCA+AGG | 0.701724 | 8.4:-28629099 | None:intergenic |
AGCAACATAGGCATACGTTG+CGG | 0.714515 | 8.4:-28629959 | None:intergenic |
TTACCTCAAAAGTCTCACCA+AGG | 0.718107 | 8.4:+28629565 | MS.gene28482:CDS |
CAATGCCTGAGTCACCAAGG+TGG | 0.763732 | 8.4:+28629401 | MS.gene28482:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGTAAATAAAATTAAAAG+TGG | - | chr8.4:28627825-28627844 | None:intergenic | 10.0% |
!! | TATGTATATTATTCTTAATA+AGG | + | chr8.4:28628720-28628739 | MS.gene28482:intron | 10.0% |
!!! | TAAGTAAAAAAACTTTTTTT+AGG | - | chr8.4:28628030-28628049 | None:intergenic | 10.0% |
!!! | TATATATCAAACTATTTTAT+GGG | + | chr8.4:28629292-28629311 | MS.gene28482:intron | 10.0% |
!!! | TTATATATCAAACTATTTTA+TGG | + | chr8.4:28629291-28629310 | MS.gene28482:intron | 10.0% |
!! | AAAATGAAAAAATTGAATAG+AGG | + | chr8.4:28628197-28628216 | MS.gene28482:intron | 15.0% |
!! | AAATTGCATTGAAAATTAAA+TGG | - | chr8.4:28628666-28628685 | None:intergenic | 15.0% |
!! | TATTCTTAATAAGGATAATT+TGG | + | chr8.4:28628729-28628748 | MS.gene28482:intron | 15.0% |
!! | TGATATTTCATTCATAATAA+TGG | + | chr8.4:28628302-28628321 | MS.gene28482:intron | 15.0% |
!!! | AAGAACAAATTTTTTGTTTT+CGG | + | chr8.4:28628548-28628567 | MS.gene28482:intron | 15.0% |
!!! | AATAAATTAACTTGAAGAAA+AGG | - | chr8.4:28628241-28628260 | None:intergenic | 15.0% |
!!! | AATTTGAGTTTTTATTTTGA+GGG | + | chr8.4:28628360-28628379 | MS.gene28482:intron | 15.0% |
!!! | ATTATAAACGAAAAACTTTT+AGG | + | chr8.4:28627951-28627970 | MS.gene28482:intron | 15.0% |
!!! | TAATTTGAGTTTTTATTTTG+AGG | + | chr8.4:28628359-28628378 | MS.gene28482:intron | 15.0% |
!!! | TTCAAGTTAATTTATTTTGA+GGG | + | chr8.4:28628245-28628264 | MS.gene28482:intron | 15.0% |
!!! | TTTTTACTTATATTAATGAC+CGG | + | chr8.4:28628040-28628059 | MS.gene28482:intron | 15.0% |
!! | AATATTAAAGAAAGCAACAT+AGG | - | chr8.4:28629974-28629993 | None:intergenic | 20.0% |
!! | ATAATGGTAACAATAAAAGA+AGG | + | chr8.4:28628318-28628337 | MS.gene28482:intron | 20.0% |
!! | ATAGATTGAAATAAAAGTCA+TGG | - | chr8.4:28630109-28630128 | None:intergenic | 20.0% |
!! | TGAGTCAAAAAAAATATTTG+TGG | - | chr8.4:28628096-28628115 | None:intergenic | 20.0% |
!! | TTTGAGTAAGCAAAATATAT+TGG | - | chr8.4:28628481-28628500 | None:intergenic | 20.0% |
!!! | AAATATTTGAGTTTGAAACT+TGG | + | chr8.4:28629316-28629335 | MS.gene28482:intron | 20.0% |
!!! | ACATGATTAATTTTAGATAC+TGG | + | chr8.4:28628899-28628918 | MS.gene28482:intron | 20.0% |
!!! | ATGTTGCTTTCTTTAATATT+GGG | + | chr8.4:28629974-28629993 | MS.gene28482:CDS | 20.0% |
!!! | ATTTTTACCACTTGATTTTT+TGG | - | chr8.4:28630259-28630278 | None:intergenic | 20.0% |
!!! | CAAAAAAATCAAACTTTTTC+TGG | + | chr8.4:28628497-28628516 | MS.gene28482:intron | 20.0% |
!!! | CATTTAACAATTAGTTTATG+TGG | + | chr8.4:28627976-28627995 | MS.gene28482:intron | 20.0% |
!!! | CTTCAAGTTAATTTATTTTG+AGG | + | chr8.4:28628244-28628263 | MS.gene28482:intron | 20.0% |
!!! | TATGTTGCTTTCTTTAATAT+TGG | + | chr8.4:28629973-28629992 | MS.gene28482:CDS | 20.0% |
!!! | TTTTCGTTTATAATTGTGAT+CGG | - | chr8.4:28627945-28627964 | None:intergenic | 20.0% |
! | AAAATCAAGTGGTAAAAATG+TGG | + | chr8.4:28630260-28630279 | MS.gene28482:CDS | 25.0% |
! | AATATGCACTTAAACAACAA+GGG | - | chr8.4:28628415-28628434 | None:intergenic | 25.0% |
! | ACAAAAACATGAATGTAACT+AGG | + | chr8.4:28628133-28628152 | MS.gene28482:intron | 25.0% |
! | ATCTATAAAGCTATCACAAT+AGG | + | chr8.4:28630123-28630142 | MS.gene28482:CDS | 25.0% |
! | GTGGTTAATTGAACTTTATA+TGG | + | chr8.4:28628168-28628187 | MS.gene28482:intron | 25.0% |
! | TAAAAATGTGGCAATAGAAA+TGG | + | chr8.4:28630272-28630291 | MS.gene28482:CDS | 25.0% |
! | TTGTTCATAAAGGAAGATTT+GGG | + | chr8.4:28628941-28628960 | MS.gene28482:CDS | 25.0% |
!! | GTTTTTACCAAAAAATCAAG+TGG | + | chr8.4:28630249-28630268 | MS.gene28482:CDS | 25.0% |
!! | TTCAAACGTGAAACTTATTT+TGG | - | chr8.4:28628613-28628632 | None:intergenic | 25.0% |
!!! | GTTTTTGTTTCTGATTTTTG+TGG | - | chr8.4:28628121-28628140 | None:intergenic | 25.0% |
!!! | TCAAACGTGAAACTTATTTT+GGG | - | chr8.4:28628612-28628631 | None:intergenic | 25.0% |
!!! | TTGTTTTTACTTGACAAACT+TGG | + | chr8.4:28629811-28629830 | MS.gene28482:CDS | 25.0% |
ATATGCACTTAAACAACAAG+GGG | - | chr8.4:28628414-28628433 | None:intergenic | 30.0% | |
CAATATGCACTTAAACAACA+AGG | - | chr8.4:28628416-28628435 | None:intergenic | 30.0% | |
CTTTCTTTAATATTGGGCTT+GGG | + | chr8.4:28629980-28629999 | MS.gene28482:CDS | 30.0% | |
GAAATTTCAGCTGAATAAAC+CGG | - | chr8.4:28629202-28629221 | None:intergenic | 30.0% | |
GAACTATAAACCCAAGTAAT+AGG | - | chr8.4:28630006-28630025 | None:intergenic | 30.0% | |
GTTGTTCATAAAGGAAGATT+TGG | + | chr8.4:28628940-28628959 | MS.gene28482:CDS | 30.0% | |
TATAAAGCTATCACAATAGG+TGG | + | chr8.4:28630126-28630145 | MS.gene28482:CDS | 30.0% | |
TCACAAATAAAACACAGACA+TGG | + | chr8.4:28628846-28628865 | MS.gene28482:intron | 30.0% | |
TTAAACCTATGTGCATTAGT+AGG | + | chr8.4:28629001-28629020 | MS.gene28482:CDS | 30.0% | |
TTACTTATATTAATGACCGG+AGG | + | chr8.4:28628043-28628062 | MS.gene28482:intron | 30.0% | |
! | AAGCTTTTACTTGCAACTAT+TGG | + | chr8.4:28629751-28629770 | MS.gene28482:CDS | 30.0% |
! | ATTGGTATTGGAATCTTGTT+AGG | + | chr8.4:28629268-28629287 | MS.gene28482:CDS | 30.0% |
! | ATTTGAGTTTGAAACTTGGT+TGG | + | chr8.4:28629320-28629339 | MS.gene28482:intron | 30.0% |
! | CCAAGAATTTTCAAAAAAGC+TGG | + | chr8.4:28629712-28629731 | MS.gene28482:CDS | 30.0% |
! | TTTTACTTGACAAACTTGGT+AGG | + | chr8.4:28629815-28629834 | MS.gene28482:CDS | 30.0% |
! | TTTTTCCTTCCTGAAACTAA+AGG | + | chr8.4:28630201-28630220 | MS.gene28482:CDS | 30.0% |
!! | AGATATTTCCTTTGAAGTTG+AGG | + | chr8.4:28630028-28630047 | MS.gene28482:CDS | 30.0% |
!! | GATATTTCCTTTGAAGTTGA+GGG | + | chr8.4:28630029-28630048 | MS.gene28482:CDS | 30.0% |
!!! | AACTAGGTATTGTTTTTACG+TGG | + | chr8.4:28628149-28628168 | MS.gene28482:intron | 30.0% |
!!! | CCAGCTTTTTTGAAAATTCT+TGG | - | chr8.4:28629715-28629734 | None:intergenic | 30.0% |
AAGATCCTACTAATGCACAT+AGG | - | chr8.4:28629009-28629028 | None:intergenic | 35.0% | |
AAGGATATAAAAATCGCTGC+TGG | + | chr8.4:28629508-28629527 | MS.gene28482:CDS | 35.0% | |
AATACAAAGTTCCGGTAAAG+AGG | - | chr8.4:28629251-28629270 | None:intergenic | 35.0% | |
ACCAAGGATGAACAATATTG+AGG | - | chr8.4:28629086-28629105 | None:intergenic | 35.0% | |
ACCATTAAAATCGCGTAGTT+TGG | - | chr8.4:28629130-28629149 | None:intergenic | 35.0% | |
AGAAATGGATCCAATACAGA+AGG | + | chr8.4:28630287-28630306 | MS.gene28482:CDS | 35.0% | |
AGGATTCTTAACCTCTTTAC+CGG | + | chr8.4:28629237-28629256 | MS.gene28482:CDS | 35.0% | |
ATTAACATCCAACGTACAGA+AGG | - | chr8.4:28629628-28629647 | None:intergenic | 35.0% | |
ATTATTGGGCTTACGCTATT+GGG | + | chr8.4:28629871-28629890 | MS.gene28482:CDS | 35.0% | |
ATTTCTTCTGCTTCATCAAG+AGG | + | chr8.4:28629217-28629236 | MS.gene28482:CDS | 35.0% | |
CAAAACGCTACTACAAATGA+AGG | - | chr8.4:28629373-28629392 | None:intergenic | 35.0% | |
CCAATACCAATACAAAGTTC+CGG | - | chr8.4:28629259-28629278 | None:intergenic | 35.0% | |
GAAAAAATGAATCCCAACTG+CGG | - | chr8.4:28629653-28629672 | None:intergenic | 35.0% | |
GAAGAACCTCTGATTACATT+GGG | + | chr8.4:28629038-28629057 | MS.gene28482:CDS | 35.0% | |
GCTTTCTTTAATATTGGGCT+TGG | + | chr8.4:28629979-28629998 | MS.gene28482:CDS | 35.0% | |
TCGATGAGTAAGTAAGGTAT+GGG | - | chr8.4:28628006-28628025 | None:intergenic | 35.0% | |
TCGTTTATAATTGTGATCGG+AGG | - | chr8.4:28627942-28627961 | None:intergenic | 35.0% | |
TCTTTACCGGAACTTTGTAT+TGG | + | chr8.4:28629250-28629269 | MS.gene28482:CDS | 35.0% | |
TGGAGCAATGTTGTTCATAA+AGG | + | chr8.4:28628931-28628950 | MS.gene28482:CDS | 35.0% | |
TTACTTGCAACTATTGGAGT+AGG | + | chr8.4:28629757-28629776 | MS.gene28482:CDS | 35.0% | |
TTAGGTTCGATGAGTAAGTA+AGG | - | chr8.4:28628012-28628031 | None:intergenic | 35.0% | |
TTAGTAGGATCTTTAACAGC+AGG | + | chr8.4:28629016-28629035 | MS.gene28482:CDS | 35.0% | |
TTCGATGAGTAAGTAAGGTA+TGG | - | chr8.4:28628007-28628026 | None:intergenic | 35.0% | |
TTGGTTATGCAAGGTCAATT+AGG | + | chr8.4:28629424-28629443 | MS.gene28482:CDS | 35.0% | |
! | AAAGCTTTGCCTTTAGTTTC+AGG | - | chr8.4:28630213-28630232 | None:intergenic | 35.0% |
! | AACTAAAGGCAAAGCTTTAG+AGG | + | chr8.4:28630215-28630234 | MS.gene28482:CDS | 35.0% |
! | AATCCAACGGAAACGTTTTA+TGG | + | chr8.4:28629917-28629936 | MS.gene28482:CDS | 35.0% |
! | ACGATGCTTATTTAAGACGT+GGG | + | chr8.4:28628817-28628836 | MS.gene28482:intron | 35.0% |
! | AGACTTTTGCAAATTAGCAC+TGG | + | chr8.4:28629841-28629860 | MS.gene28482:CDS | 35.0% |
! | ATCCAACGGAAACGTTTTAT+GGG | + | chr8.4:28629918-28629937 | MS.gene28482:CDS | 35.0% |
! | ATGTTACTTGATCCCACTTA+GGG | - | chr8.4:28628578-28628597 | None:intergenic | 35.0% |
! | TACGATGCTTATTTAAGACG+TGG | + | chr8.4:28628816-28628835 | MS.gene28482:intron | 35.0% |
! | TATGTTACTTGATCCCACTT+AGG | - | chr8.4:28628579-28628598 | None:intergenic | 35.0% |
! | TCCAAACTACGCGATTTTAA+TGG | + | chr8.4:28629126-28629145 | MS.gene28482:CDS | 35.0% |
! | TTTTGTCTTGAGTAATCCTC+CGG | - | chr8.4:28628062-28628081 | None:intergenic | 35.0% |
!! | AACTACGCGATTTTAATGGT+TGG | + | chr8.4:28629130-28629149 | MS.gene28482:CDS | 35.0% |
!! | TTAGATACTGGTGTTATGAG+TGG | + | chr8.4:28628911-28628930 | MS.gene28482:intron | 35.0% |
!!! | ACGTGAAACTTATTTTGGGA+AGG | - | chr8.4:28628608-28628627 | None:intergenic | 35.0% |
!!! | CATTTTTTCGAACATGCAAC+TGG | + | chr8.4:28629664-28629683 | MS.gene28482:CDS | 35.0% |
!!! | CTGGTATATCTGTTTTAGCT+TGG | + | chr8.4:28630166-28630185 | MS.gene28482:CDS | 35.0% |
!!! | GAAACTTATTTTGGGAAGGA+GGG | - | chr8.4:28628604-28628623 | None:intergenic | 35.0% |
!!! | GGAAGTTTTTTCATGTTTGC+TGG | + | chr8.4:28630147-28630166 | MS.gene28482:CDS | 35.0% |
!!! | TGAAACTTATTTTGGGAAGG+AGG | - | chr8.4:28628605-28628624 | None:intergenic | 35.0% |
AAAAGTCTCACCAAGGTGAA+GGG | + | chr8.4:28629572-28629591 | MS.gene28482:CDS | 40.0% | |
AATCAGTGACACACAACAAG+AGG | + | chr8.4:28628964-28628983 | MS.gene28482:CDS | 40.0% | |
ATGGTTGGAAGATGTGTTTG+TGG | + | chr8.4:28629145-28629164 | MS.gene28482:CDS | 40.0% | |
CATGGAAACAACAGCATTCA+TGG | - | chr8.4:28630091-28630110 | None:intergenic | 40.0% | |
CGATGAGTAAGTAAGGTATG+GGG | - | chr8.4:28628005-28628024 | None:intergenic | 40.0% | |
CGTACCATAACCAGAAACAA+TGG | - | chr8.4:28627777-28627796 | None:intergenic | 40.0% | |
CTTGGTTGGAGATTAATGCT+TGG | + | chr8.4:28629334-28629353 | MS.gene28482:intron | 40.0% | |
CTTTGCTCTTATGATAGCAC+CGG | + | chr8.4:28629180-28629199 | MS.gene28482:CDS | 40.0% | |
GATTATTGGGCTTACGCTAT+TGG | + | chr8.4:28629870-28629889 | MS.gene28482:CDS | 40.0% | |
GCACTGGAGGAATGATTATT+GGG | + | chr8.4:28629857-28629876 | MS.gene28482:CDS | 40.0% | |
GCCTCAATATTGTTCATCCT+TGG | + | chr8.4:28629082-28629101 | MS.gene28482:CDS | 40.0% | |
GGAAGAACCTCTGATTACAT+TGG | + | chr8.4:28629037-28629056 | MS.gene28482:CDS | 40.0% | |
TCAATGGTGTCCATTGTTTC+TGG | + | chr8.4:28627764-28627783 | MS.gene28482:CDS | 40.0% | |
TTACCTCAAAAGTCTCACCA+AGG | + | chr8.4:28629565-28629584 | MS.gene28482:CDS | 40.0% | |
TTGTGCCATAGTTGCTTCAA+TGG | + | chr8.4:28627748-28627767 | MS.gene28482:CDS | 40.0% | |
! | AGCACTGGAGGAATGATTAT+TGG | + | chr8.4:28629856-28629875 | MS.gene28482:CDS | 40.0% |
! | AGGGATTCAAGTTTAGTGAC+CGG | + | chr8.4:28628379-28628398 | MS.gene28482:intron | 40.0% |
! | ATATTGTTCATCCTTGGTGC+AGG | + | chr8.4:28629088-28629107 | MS.gene28482:CDS | 40.0% |
! | CCGGAACTTTGTATTGGTAT+TGG | + | chr8.4:28629256-28629275 | MS.gene28482:CDS | 40.0% |
! | CTTTGCCTTTAGTTTCAGGA+AGG | - | chr8.4:28630209-28630228 | None:intergenic | 40.0% |
! | GTTTTCGGTTTTCCCTAAGT+GGG | + | chr8.4:28628563-28628582 | MS.gene28482:intron | 40.0% |
! | TGTTTTCGGTTTTCCCTAAG+TGG | + | chr8.4:28628562-28628581 | MS.gene28482:intron | 40.0% |
!! | AGCTTTAGAGGAAATGGAGA+TGG | + | chr8.4:28630227-28630246 | MS.gene28482:CDS | 40.0% |
!! | AGGCAAAGCTTTAGAGGAAA+TGG | + | chr8.4:28630221-28630240 | MS.gene28482:CDS | 40.0% |
!! | CTTTTGCAAATTAGCACTGG+AGG | + | chr8.4:28629844-28629863 | MS.gene28482:CDS | 40.0% |
!! | GTGTCCATTGTTTCTGGTTA+TGG | + | chr8.4:28627770-28627789 | MS.gene28482:CDS | 40.0% |
AAAGTCTCACCAAGGTGAAG+GGG | + | chr8.4:28629573-28629592 | MS.gene28482:CDS | 45.0% | |
AGAAGCAGAACTTCGTCTCA+AGG | + | chr8.4:28629489-28629508 | MS.gene28482:CDS | 45.0% | |
AGCAACATAGGCATACGTTG+CGG | - | chr8.4:28629962-28629981 | None:intergenic | 45.0% | |
AGCAACTATGGCACAAGCAA+AGG | - | chr8.4:28627744-28627763 | None:intergenic | 45.0% | |
CAAAAGTCTCACCAAGGTGA+AGG | + | chr8.4:28629571-28629590 | MS.gene28482:CDS | 45.0% | |
CAACAAGGGGATCAAGAAAC+CGG | - | chr8.4:28628401-28628420 | None:intergenic | 45.0% | |
GGAAGATGTGTTTGTGGTGT+AGG | + | chr8.4:28629151-28629170 | MS.gene28482:CDS | 45.0% | |
GGACACCATTGAAGCAACTA+TGG | - | chr8.4:28627756-28627775 | None:intergenic | 45.0% | |
GGATGTTAATTGCCGCAGTT+GGG | + | chr8.4:28629638-28629657 | MS.gene28482:CDS | 45.0% | |
TAACAATGCCTGAGTCACCA+AGG | + | chr8.4:28629398-28629417 | MS.gene28482:CDS | 45.0% | |
TCCGTTGGATTTATCCACCA+CGG | - | chr8.4:28629908-28629927 | None:intergenic | 45.0% | |
TGGATGTTAATTGCCGCAGT+TGG | + | chr8.4:28629637-28629656 | MS.gene28482:CDS | 45.0% | |
TGTGTTTGTGGTGTAGGTGT+TGG | + | chr8.4:28629157-28629176 | MS.gene28482:CDS | 45.0% | |
! | ACACAACAAGAGGTTCTAGC+AGG | + | chr8.4:28628974-28628993 | MS.gene28482:CDS | 45.0% |
! | ATCCTTGGTGCAGGTCTAAT+GGG | + | chr8.4:28629097-28629116 | MS.gene28482:CDS | 45.0% |
! | TCACCTTGGTGAGACTTTTG+AGG | - | chr8.4:28629571-28629590 | None:intergenic | 45.0% |
!! | ACCGTGGTGGATAAATCCAA+CGG | + | chr8.4:28629904-28629923 | MS.gene28482:CDS | 45.0% |
!! | AAAAGAAAAAAAAAATTTAT+TGG | - | chr8.4:28627873-28627892 | None:intergenic | 5.0% |
AGGGCACAAGGAGCAAGTAT+TGG | + | chr8.4:28630048-28630067 | MS.gene28482:CDS | 50.0% | |
CCTTGCATAACCAACCACCT+TGG | - | chr8.4:28629418-28629437 | None:intergenic | 50.0% | |
CCTTGTGCCCTCAACTTCAA+AGG | - | chr8.4:28630039-28630058 | None:intergenic | 50.0% | |
CTTTCCAAACCCCTTCACCT+TGG | - | chr8.4:28629585-28629604 | None:intergenic | 50.0% | |
GGCCCATAAAACGTTTCCGT+TGG | - | chr8.4:28629923-28629942 | None:intergenic | 50.0% | |
TATCCACCACGGTCAAGCTA+AGG | - | chr8.4:28629897-28629916 | None:intergenic | 50.0% | |
TGGGCTTGGGCCTATTACTT+GGG | + | chr8.4:28629993-28630012 | MS.gene28482:CDS | 50.0% | |
TTGGGCTTGGGCCTATTACT+TGG | + | chr8.4:28629992-28630011 | MS.gene28482:CDS | 50.0% | |
! | ATCCAACGTACAGAAGGCGT+TGG | - | chr8.4:28629622-28629641 | None:intergenic | 50.0% |
! | CATCCTTGGTGCAGGTCTAA+TGG | + | chr8.4:28629096-28629115 | MS.gene28482:CDS | 50.0% |
! | CCAAGGTGGTTGGTTATGCA+AGG | + | chr8.4:28629415-28629434 | MS.gene28482:CDS | 50.0% |
! | TCCTTGGTGCAGGTCTAATG+GGG | + | chr8.4:28629098-28629117 | MS.gene28482:CDS | 50.0% |
!! | CCTTTGAAGTTGAGGGCACA+AGG | + | chr8.4:28630036-28630055 | MS.gene28482:CDS | 50.0% |
ACCCCATTAGACCTGCACCA+AGG | - | chr8.4:28629102-28629121 | None:intergenic | 55.0% | |
CAATGCCTGAGTCACCAAGG+TGG | + | chr8.4:28629401-28629420 | MS.gene28482:CDS | 55.0% | |
CATACGTTGCGGCGATGCTA+AGG | - | chr8.4:28629951-28629970 | None:intergenic | 55.0% | |
CTCACCAAGGTGAAGGGGTT+TGG | + | chr8.4:28629578-28629597 | MS.gene28482:CDS | 55.0% | |
GACCAACGCCTTCTGTACGT+TGG | + | chr8.4:28629617-28629636 | MS.gene28482:CDS | 55.0% | |
GCGACGCCCAATGTAATCAG+AGG | - | chr8.4:28629047-28629066 | None:intergenic | 55.0% | |
GGTGCAGGTCTAATGGGGTA+TGG | + | chr8.4:28629103-28629122 | MS.gene28482:CDS | 55.0% | |
TGCGGCGATGCTAAGGATCA+AGG | - | chr8.4:28629944-28629963 | None:intergenic | 55.0% | |
! | ACCAACCACCTTGGTGACTC+AGG | - | chr8.4:28629409-28629428 | None:intergenic | 55.0% |
! | ATTGGGCCTTAGCTTGACCG+TGG | + | chr8.4:28629888-28629907 | MS.gene28482:CDS | 55.0% |
GCCTGAGTCACCAAGGTGGT+TGG | + | chr8.4:28629405-28629424 | MS.gene28482:CDS | 60.0% | |
! | GGGCCTTAGCTTGACCGTGG+TGG | + | chr8.4:28629891-28629910 | MS.gene28482:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 28627686 | 28630314 | 28627686 | ID=MS.gene28482 |
chr8.4 | mRNA | 28627686 | 28630314 | 28627686 | ID=MS.gene28482.t1;Parent=MS.gene28482 |
chr8.4 | exon | 28627686 | 28627791 | 28627686 | ID=MS.gene28482.t1.exon1;Parent=MS.gene28482.t1 |
chr8.4 | CDS | 28627686 | 28627791 | 28627686 | ID=cds.MS.gene28482.t1;Parent=MS.gene28482.t1 |
chr8.4 | exon | 28628915 | 28629289 | 28628915 | ID=MS.gene28482.t1.exon2;Parent=MS.gene28482.t1 |
chr8.4 | CDS | 28628915 | 28629289 | 28628915 | ID=cds.MS.gene28482.t1;Parent=MS.gene28482.t1 |
chr8.4 | exon | 28629365 | 28630314 | 28629365 | ID=MS.gene28482.t1.exon3;Parent=MS.gene28482.t1 |
chr8.4 | CDS | 28629365 | 28630314 | 28629365 | ID=cds.MS.gene28482.t1;Parent=MS.gene28482.t1 |
Gene Sequence |
Protein sequence |