AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28482


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28482.t1 MTR_8g077890 93.613 501 7 1 1 476 1 501 0.0 936
MS.gene28482.t1 MTR_5g075300 78.600 500 81 2 1 474 1 500 0.0 802
MS.gene28482.t1 MTR_4g069500 57.113 485 181 3 16 474 27 510 0.0 551
MS.gene28482.t1 MTR_3g116240 57.203 479 177 4 7 459 17 493 0.0 539
MS.gene28482.t1 MTR_4g072030 56.652 466 176 2 16 457 24 487 0.0 530
MS.gene28482.t1 MTR_4g069500 56.182 461 175 3 40 474 1 460 1.76e-180 514
MS.gene28482.t1 MTR_5g019870 52.083 480 204 2 11 464 7 486 5.82e-170 488
MS.gene28482.t1 MTR_6g088450 49.356 466 202 2 8 449 47 502 2.72e-153 446
MS.gene28482.t1 MTR_8g103500 48.548 482 215 4 2 459 1 473 7.44e-149 434
MS.gene28482.t1 MTR_2g013310 45.361 485 226 5 16 476 50 519 2.83e-139 410
MS.gene28482.t1 MTR_7g446340 42.485 499 248 5 2 476 38 521 2.69e-138 408
MS.gene28482.t1 MTR_6g007340 42.485 499 248 5 2 476 38 521 2.69e-138 408
MS.gene28482.t1 MTR_2g013310 44.902 461 215 6 40 476 1 446 7.67e-129 381
MS.gene28482.t1 MTR_4g069500 56.308 325 136 3 152 474 1 321 5.64e-128 375
MS.gene28482.t1 MTR_3g084110 31.743 482 274 9 16 465 25 483 5.26e-66 221
MS.gene28482.t1 MTR_1g116650 31.276 486 273 7 9 465 67 520 2.17e-64 217
MS.gene28482.t1 MTR_1g116660 32.773 476 273 7 16 463 32 488 2.58e-63 214
MS.gene28482.t1 MTR_7g005910 30.658 486 291 8 8 465 20 487 1.19e-62 212
MS.gene28482.t1 MTR_4g077740 27.778 486 303 8 5 454 24 497 1.28e-53 187
MS.gene28482.t1 MTR_3g074410 28.854 506 275 12 12 460 15 492 1.74e-52 185
MS.gene28482.t1 MTR_6g018790 30.968 465 264 9 25 461 111 546 3.73e-52 185
MS.gene28482.t1 MTR_7g082270 30.835 467 262 10 25 461 71 506 2.68e-50 179
MS.gene28482.t1 MTR_1g022315 27.451 459 290 8 21 457 51 488 1.07e-49 177
MS.gene28482.t1 MTR_5g020270 28.665 457 284 8 22 457 53 488 4.41e-49 175
MS.gene28482.t1 MTR_8g077310 28.665 457 278 10 22 454 50 482 2.36e-48 173
MS.gene28482.t1 MTR_0009s0370 31.746 441 248 9 65 474 88 506 2.09e-47 171
MS.gene28482.t1 MTR_4g118610 30.180 444 260 11 34 454 67 483 8.56e-47 169
MS.gene28482.t1 MTR_2g020710 30.445 427 255 10 47 454 77 480 6.02e-46 167
MS.gene28482.t1 MTR_5g077580 27.106 546 284 9 16 461 23 554 2.65e-45 166
MS.gene28482.t1 MTR_5g041550 28.150 508 293 12 3 460 8 493 6.59e-45 164
MS.gene28482.t1 MTR_5g020270 29.584 409 246 8 70 457 1 388 7.47e-45 161
MS.gene28482.t1 MTR_3g008160 28.106 491 283 12 24 466 28 496 9.11e-45 164
MS.gene28482.t1 MTR_3g008170 28.487 509 294 11 7 464 11 500 1.19e-44 164
MS.gene28482.t1 MTR_3g023480 29.858 422 248 7 67 460 90 491 3.68e-44 162
MS.gene28482.t1 MTR_3g008160 28.837 430 256 9 65 466 40 447 4.61e-44 161
MS.gene28482.t1 MTR_8g077300 26.724 464 296 9 18 459 38 479 6.80e-44 161
MS.gene28482.t1 MTR_2g020710 30.732 410 242 10 64 454 5 391 1.11e-43 159
MS.gene28482.t1 MTR_1g022315 27.561 410 254 8 70 457 1 389 1.65e-43 158
MS.gene28482.t1 MTR_8g077310 29.095 409 242 10 70 454 1 385 2.68e-43 157
MS.gene28482.t1 MTR_7g113960 27.778 468 291 9 30 476 38 479 3.39e-43 159
MS.gene28482.t1 MTR_7g094450 28.390 472 293 10 3 454 24 470 7.02e-43 158
MS.gene28482.t1 MTR_3g074390 29.234 431 242 8 65 460 93 495 8.45e-43 159
MS.gene28482.t1 MTR_3g093010 26.938 516 308 11 5 471 8 503 1.01e-42 158
MS.gene28482.t1 MTR_5g006070 28.671 429 244 10 59 453 35 435 2.24e-42 157
MS.gene28482.t1 MTR_3g007910 26.465 495 285 10 5 461 8 461 2.98e-42 156
MS.gene28482.t1 MTR_5g006070 28.671 429 244 10 59 453 83 483 3.43e-42 157
MS.gene28482.t1 MTR_2g049020 33.141 347 193 6 16 336 23 356 5.50e-42 157
MS.gene28482.t1 MTR_2g049020 35.714 98 63 0 364 461 460 557 2.83e-13 72.4
MS.gene28482.t1 MTR_3g093060 28.833 437 262 9 65 472 42 458 5.58e-42 155
MS.gene28482.t1 MTR_7g113970 26.496 468 290 8 15 464 71 502 1.51e-41 155
MS.gene28482.t1 MTR_4g090600 27.757 526 299 14 3 470 8 510 3.36e-41 154
MS.gene28482.t1 MTR_8g102860 27.364 497 295 12 18 469 26 501 7.89e-41 153
MS.gene28482.t1 MTR_3g080240 27.137 468 291 9 19 461 93 535 1.63e-40 152
MS.gene28482.t1 MTR_5g020270 26.915 457 271 9 22 457 53 467 1.82e-40 151
MS.gene28482.t1 MTR_0204s0020 26.946 501 303 12 8 466 9 488 2.91e-40 151
MS.gene28482.t1 MTR_0204s0020 26.786 504 303 12 8 466 9 491 3.99e-40 151
MS.gene28482.t1 MTR_4g091370 27.856 499 291 10 7 457 12 489 4.20e-40 151
MS.gene28482.t1 MTR_2g048720 33.903 351 190 7 16 340 23 357 4.59e-40 152
MS.gene28482.t1 MTR_8g102860 28.372 430 263 8 65 469 40 449 4.94e-40 150
MS.gene28482.t1 MTR_3g074270 27.235 481 267 10 24 460 28 469 1.24e-39 149
MS.gene28482.t1 MTR_1g104750 27.766 479 274 11 24 453 28 483 1.54e-39 149
MS.gene28482.t1 MTR_7g094110 28.903 474 288 12 6 454 23 472 1.57e-39 149
MS.gene28482.t1 MTR_7g082270 30.788 406 220 10 25 400 71 445 1.92e-39 149
MS.gene28482.t1 MTR_1g038630 28.600 493 272 13 18 457 22 487 7.65e-39 147
MS.gene28482.t1 MTR_1g104780 28.442 443 259 8 65 475 89 505 1.44e-38 147
MS.gene28482.t1 MTR_6g087040 26.698 427 268 7 65 466 92 498 2.07e-38 146
MS.gene28482.t1 MTR_6g088375 26.698 427 268 7 65 466 92 498 2.07e-38 146
MS.gene28482.t1 MTR_1g038600 28.333 480 272 12 18 457 22 469 2.55e-38 146
MS.gene28482.t1 MTR_1g104770 28.904 429 252 9 55 453 79 484 2.94e-38 146
MS.gene28482.t1 MTR_0204s0040 25.896 502 305 11 4 460 14 493 1.49e-37 144
MS.gene28482.t1 MTR_4g116770 25.896 502 305 11 4 460 210 689 1.09e-36 144
MS.gene28482.t1 MTR_4g013205 28.976 459 270 14 24 455 41 470 2.23e-36 140
MS.gene28482.t1 MTR_6g087910 27.893 484 288 12 1 455 33 484 3.08e-36 140
MS.gene28482.t1 MTR_2g026160 29.301 372 218 8 7 345 10 369 1.53e-35 139
MS.gene28482.t1 MTR_2g026160 37.143 105 66 0 355 459 454 558 1.78e-15 79.3
MS.gene28482.t1 MTR_4g116790 25.397 504 309 11 2 460 10 491 1.09e-34 136
MS.gene28482.t1 MTR_5g094760 27.049 488 289 12 18 460 26 491 7.57e-34 134
MS.gene28482.t1 MTR_7g091690 26.130 509 311 11 2 466 10 497 9.85e-34 133
MS.gene28482.t1 MTR_5g082540 26.157 497 279 15 18 457 22 487 7.65e-33 130
MS.gene28482.t1 MTR_2g020710 29.213 356 211 9 47 383 77 410 8.39e-33 129
MS.gene28482.t1 MTR_2g020710 29.296 355 210 9 47 382 77 409 1.88e-32 128
MS.gene28482.t1 MTR_8g077310 28.448 348 206 7 22 347 50 376 5.74e-32 127
MS.gene28482.t1 MTR_4g118610 28.534 382 224 10 25 383 58 413 7.04e-32 127
MS.gene28482.t1 MTR_3g074370 30.395 329 185 10 159 471 37 337 2.02e-30 121
MS.gene28482.t1 MTR_3g074340 30.794 315 177 9 159 460 37 323 3.12e-30 120
MS.gene28482.t1 MTR_3g074320 30.476 315 178 9 159 460 37 323 8.66e-30 119
MS.gene28482.t1 MTR_7g094110 26.907 472 280 11 6 454 23 452 1.15e-29 121
MS.gene28482.t1 MTR_2g026140 27.809 356 221 10 7 341 10 350 9.06e-29 119
MS.gene28482.t1 MTR_2g026140 35.238 105 68 0 355 459 439 543 2.18e-11 66.6
MS.gene28482.t1 MTR_4g064820 27.869 366 223 8 7 336 80 440 1.17e-27 115
MS.gene28482.t1 MTR_3g074380 26.836 354 199 8 24 336 31 365 7.03e-26 108
MS.gene28482.t1 MTR_2g020710 28.435 313 184 8 47 340 77 368 2.07e-25 107
MS.gene28482.t1 MTR_3g116060 29.362 235 141 3 17 226 2 236 9.13e-25 108
MS.gene28482.t1 MTR_3g116060 29.921 254 150 8 229 465 487 729 1.19e-20 95.9
MS.gene28482.t1 MTR_3g074400 27.885 416 237 10 65 451 39 420 2.33e-24 105
MS.gene28482.t1 MTR_7g113960 27.246 334 202 6 30 344 38 349 4.49e-24 103
MS.gene28482.t1 MTR_7g113970 25.000 348 209 6 15 344 71 384 3.12e-23 102
MS.gene28482.t1 MTR_5g044910 26.068 234 146 4 23 229 8 241 2.05e-20 95.1
MS.gene28482.t1 MTR_5g044910 30.303 231 127 5 239 451 487 701 2.76e-17 85.1
MS.gene28482.t1 MTR_5g024740 27.350 234 143 4 23 229 8 241 7.58e-20 93.2
MS.gene28482.t1 MTR_5g024740 27.530 247 146 7 222 451 473 703 2.25e-15 79.3
MS.gene28482.t1 MTR_8g073100 27.723 202 118 5 23 197 8 208 9.81e-19 89.7
MS.gene28482.t1 MTR_8g073100 27.027 222 146 4 239 451 485 699 5.12e-14 75.1
MS.gene28482.t1 MTR_3g118530 28.319 226 131 6 30 226 15 238 1.12e-17 86.7
MS.gene28482.t1 MTR_3g118530 26.339 224 145 5 239 451 507 721 1.19e-16 83.2
MS.gene28482.t1 MTR_3g118530 29.592 196 108 5 30 197 15 208 1.58e-17 85.9
MS.gene28482.t1 MTR_4g116790 21.978 364 221 7 2 322 10 353 4.42e-17 83.2
MS.gene28482.t1 MTR_5g096000 29.508 183 122 4 5 183 8 187 1.74e-14 74.7
MS.gene28482.t1 MTR_8g077130 73.333 45 11 1 193 236 38 82 1.45e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28482.t1 AT4G36670 63.883 479 146 2 16 467 14 492 0.0 623
MS.gene28482.t1 AT2G18480 66.385 473 134 2 9 457 12 483 0.0 605
MS.gene28482.t1 AT3G18830 56.103 467 181 1 16 458 33 499 0.0 551
MS.gene28482.t1 AT2G16120 53.157 491 204 3 7 471 14 504 0.0 522
MS.gene28482.t1 AT2G16130 53.306 484 201 2 7 465 14 497 0.0 522
MS.gene28482.t1 AT2G20780 42.656 497 244 4 4 476 40 519 1.12e-137 407
MS.gene28482.t1 AT2G20780 42.232 457 223 4 44 476 22 461 4.21e-122 365
MS.gene28482.t1 AT2G43330 30.608 477 285 7 16 464 28 486 6.91e-58 199
MS.gene28482.t1 AT1G75220 29.694 458 280 6 21 457 50 486 2.92e-55 192
MS.gene28482.t1 AT5G17010 33.090 411 235 7 69 454 104 499 4.38e-52 184
MS.gene28482.t1 AT5G17010 33.090 411 235 7 69 454 104 499 4.38e-52 184
MS.gene28482.t1 AT5G17010 33.090 411 235 7 69 454 104 499 4.38e-52 184
MS.gene28482.t1 AT5G16150 31.670 461 262 8 25 459 111 544 8.95e-52 184
MS.gene28482.t1 AT5G16150 31.670 461 262 8 25 459 111 544 8.95e-52 184
MS.gene28482.t1 AT5G16150 31.670 461 262 8 25 459 111 544 8.95e-52 184
MS.gene28482.t1 AT3G03090 32.151 451 263 11 34 454 62 499 1.99e-51 182
MS.gene28482.t1 AT5G27350 28.908 467 287 7 21 465 29 472 2.02e-50 179
MS.gene28482.t1 AT3G05160 28.125 480 294 8 1 458 5 455 6.40e-50 177
MS.gene28482.t1 AT1G19450 28.633 461 283 7 20 457 50 487 8.95e-50 177
MS.gene28482.t1 AT5G26250 28.773 497 291 10 1 454 4 480 2.29e-49 176
MS.gene28482.t1 AT3G05150 31.545 466 261 14 25 460 37 474 8.29e-49 174
MS.gene28482.t1 AT5G27360 28.221 489 294 9 2 465 20 476 1.31e-48 174
MS.gene28482.t1 AT5G18840 28.870 478 294 10 7 461 28 482 2.18e-48 173
MS.gene28482.t1 AT3G05150 31.441 458 258 13 25 454 37 466 3.41e-48 172
MS.gene28482.t1 AT3G05150 31.441 458 258 13 25 454 37 466 3.41e-48 172
MS.gene28482.t1 AT5G59250 28.541 466 283 8 24 454 103 553 3.86e-48 174
MS.gene28482.t1 AT5G27360 28.221 489 294 9 2 465 68 524 4.98e-48 173
MS.gene28482.t1 AT1G11260 28.484 488 276 13 20 457 25 489 5.24e-47 170
MS.gene28482.t1 AT3G05165 27.530 494 285 10 1 461 14 467 1.32e-46 168
MS.gene28482.t1 AT3G05165 27.530 494 285 10 1 461 14 467 1.32e-46 168
MS.gene28482.t1 AT3G05165 27.530 494 285 10 1 461 14 467 1.32e-46 168
MS.gene28482.t1 AT3G05960 30.021 473 282 13 18 454 20 479 5.67e-46 167
MS.gene28482.t1 AT1G50310 26.978 493 285 12 24 465 30 498 1.92e-45 166
MS.gene28482.t1 AT3G05160 28.505 428 265 6 49 458 2 406 4.41e-44 160
MS.gene28482.t1 AT3G05160 28.505 428 265 6 49 458 2 406 4.41e-44 160
MS.gene28482.t1 AT3G19930 29.040 427 242 9 65 457 88 487 1.56e-43 160
MS.gene28482.t1 AT3G19930 29.040 427 242 9 65 457 88 487 1.56e-43 160
MS.gene28482.t1 AT1G54730 28.785 469 287 11 7 454 20 462 1.86e-43 159
MS.gene28482.t1 AT4G02050 28.175 504 293 12 9 466 17 497 3.09e-43 160
MS.gene28482.t1 AT4G02050 28.175 504 293 12 9 466 17 497 3.09e-43 160
MS.gene28482.t1 AT3G19940 27.926 487 277 11 24 460 30 492 3.80e-43 160
MS.gene28482.t1 AT1G08900 27.423 485 287 12 7 461 13 462 4.24e-43 159
MS.gene28482.t1 AT1G08900 27.423 485 287 12 7 461 13 462 4.24e-43 159
MS.gene28482.t1 AT1G08900 28.315 445 254 12 47 461 11 420 1.35e-42 156
MS.gene28482.t1 AT1G08900 28.315 445 254 12 47 461 45 454 1.57e-42 157
MS.gene28482.t1 AT1G30220 35.795 352 177 9 16 336 25 358 2.66e-42 158
MS.gene28482.t1 AT1G30220 37.755 98 61 0 364 461 463 560 3.84e-15 78.2
MS.gene28482.t1 AT1G08930 27.778 468 293 13 7 454 46 488 7.35e-42 155
MS.gene28482.t1 AT1G08930 27.778 468 293 13 7 454 46 488 7.35e-42 155
MS.gene28482.t1 AT5G26340 28.247 485 280 11 24 460 28 492 7.63e-42 156
MS.gene28482.t1 AT4G21480 27.455 499 295 11 6 457 9 487 1.35e-41 155
MS.gene28482.t1 AT4G04750 27.828 442 264 10 47 462 64 476 3.23e-41 154
MS.gene28482.t1 AT4G04750 27.828 442 264 10 47 462 64 476 3.23e-41 154
MS.gene28482.t1 AT1G77210 27.723 505 287 13 18 471 26 503 5.60e-41 154
MS.gene28482.t1 AT1G77210 27.723 505 287 13 18 471 26 503 5.60e-41 154
MS.gene28482.t1 AT4G04750 27.828 442 264 10 47 462 108 520 7.09e-41 154
MS.gene28482.t1 AT5G23270 27.413 518 286 14 2 460 7 493 8.93e-41 153
MS.gene28482.t1 AT1G05030 28.000 475 280 11 19 462 79 522 7.77e-40 150
MS.gene28482.t1 AT1G67300 29.209 493 285 13 1 460 32 493 1.34e-38 147
MS.gene28482.t1 AT1G08890 27.692 455 274 11 25 454 33 457 2.42e-38 145
MS.gene28482.t1 AT1G67300 28.947 494 284 14 1 460 32 492 2.58e-38 146
MS.gene28482.t1 AT1G67300 28.947 494 284 14 1 460 32 492 2.58e-38 146
MS.gene28482.t1 AT5G61520 26.112 517 302 14 1 460 1 494 3.24e-38 146
MS.gene28482.t1 AT2G48020 27.824 478 282 12 6 456 19 460 3.90e-38 145
MS.gene28482.t1 AT2G48020 27.824 478 282 12 6 456 19 460 3.90e-38 145
MS.gene28482.t1 AT3G05165 26.423 492 278 10 1 459 14 454 1.39e-37 144
MS.gene28482.t1 AT1G54730 28.638 426 258 10 7 411 20 420 2.37e-37 142
MS.gene28482.t1 AT5G61520 26.728 434 268 8 65 471 47 457 5.41e-37 142
MS.gene28482.t1 AT1G79820 29.436 479 278 14 6 455 41 488 1.49e-36 141
MS.gene28482.t1 AT1G79820 29.436 479 278 14 6 455 41 488 1.49e-36 141
MS.gene28482.t1 AT1G54730 27.505 469 272 12 7 454 20 441 2.00e-36 140
MS.gene28482.t1 AT5G27360 27.889 398 240 7 89 465 1 372 2.25e-36 138
MS.gene28482.t1 AT5G27360 27.889 398 240 7 89 465 1 372 2.25e-36 138
MS.gene28482.t1 AT1G07340 27.651 481 278 12 20 453 24 481 2.41e-36 140
MS.gene28482.t1 AT4G04760 25.268 467 286 9 18 460 43 470 4.19e-36 139
MS.gene28482.t1 AT4G04760 25.459 436 275 7 49 460 2 411 5.39e-36 138
MS.gene28482.t1 AT3G05155 26.338 467 296 7 8 454 17 455 7.36e-36 139
MS.gene28482.t1 AT2G35740 31.792 346 198 9 18 336 25 359 7.90e-36 140
MS.gene28482.t1 AT2G35740 37.363 91 57 0 364 454 466 556 1.39e-13 73.6
MS.gene28482.t1 AT1G34580 27.366 486 284 11 24 460 29 494 1.60e-35 138
MS.gene28482.t1 AT3G05165 27.336 428 239 9 1 395 14 402 1.60e-35 137
MS.gene28482.t1 AT3G05165 27.336 428 239 9 1 395 14 402 1.60e-35 137
MS.gene28482.t1 AT1G34580 28.235 425 257 8 65 460 39 444 4.03e-35 136
MS.gene28482.t1 AT1G05030 27.253 455 269 11 39 462 47 470 9.04e-35 135
MS.gene28482.t1 AT4G16480 30.303 363 212 8 5 336 8 360 9.53e-35 137
MS.gene28482.t1 AT4G16480 37.363 91 57 0 364 454 467 557 2.58e-14 75.9
MS.gene28482.t1 AT4G16480 30.303 363 212 8 5 336 8 360 9.53e-35 137
MS.gene28482.t1 AT4G16480 37.363 91 57 0 364 454 467 557 2.58e-14 75.9
MS.gene28482.t1 AT4G16480 30.303 363 212 8 5 336 8 360 9.53e-35 137
MS.gene28482.t1 AT4G16480 37.363 91 57 0 364 454 467 557 2.58e-14 75.9
MS.gene28482.t1 AT1G67300 29.263 434 240 14 1 400 32 432 1.32e-33 132
MS.gene28482.t1 AT1G67300 29.263 434 240 14 1 400 32 432 1.32e-33 132
MS.gene28482.t1 AT1G67300 29.647 425 232 14 1 391 32 423 2.22e-33 131
MS.gene28482.t1 AT1G67300 29.647 425 232 14 1 391 32 423 2.22e-33 131
MS.gene28482.t1 AT5G27360 27.229 415 246 8 2 391 20 403 2.82e-33 131
MS.gene28482.t1 AT1G08900 26.790 433 257 10 7 411 13 413 3.39e-33 130
MS.gene28482.t1 AT1G54730 28.894 398 237 10 7 383 20 392 6.76e-32 127
MS.gene28482.t1 AT1G54730 28.894 398 237 10 7 383 20 392 6.76e-32 127
MS.gene28482.t1 AT1G08920 25.630 476 305 12 8 459 17 467 1.04e-31 127
MS.gene28482.t1 AT4G04760 24.468 470 283 10 18 460 43 467 5.31e-31 125
MS.gene28482.t1 AT1G79820 29.454 421 243 12 6 400 41 433 8.44e-31 124
MS.gene28482.t1 AT1G54730 26.995 426 244 11 7 411 20 399 2.40e-30 122
MS.gene28482.t1 AT1G08920 25.466 483 304 13 8 459 17 474 2.76e-30 123
MS.gene28482.t1 AT1G50310 26.503 366 214 10 131 465 14 355 4.38e-30 120
MS.gene28482.t1 AT3G05400 23.355 471 317 8 8 459 16 461 5.90e-30 122
MS.gene28482.t1 AT1G77210 27.394 376 216 9 127 471 5 354 5.40e-29 117
MS.gene28482.t1 AT5G17010 28.224 411 191 9 69 454 105 436 4.93e-27 113
MS.gene28482.t1 AT3G20460 23.457 486 305 14 4 459 40 488 8.87e-27 113
MS.gene28482.t1 AT3G05400 22.669 472 301 9 7 459 15 441 1.21e-25 109
MS.gene28482.t1 AT1G08920 25.234 428 272 11 8 411 17 420 1.97e-25 108
MS.gene28482.t1 AT1G54730 27.456 397 223 12 7 383 20 371 5.27e-25 107
MS.gene28482.t1 AT1G20840 28.340 247 146 5 17 236 2 244 3.68e-24 106
MS.gene28482.t1 AT1G20840 28.295 258 157 6 229 471 489 733 3.33e-17 85.1
MS.gene28482.t1 AT1G20840 28.340 247 146 5 17 236 2 244 3.68e-24 106
MS.gene28482.t1 AT1G20840 28.295 258 157 6 229 471 489 733 3.33e-17 85.1
MS.gene28482.t1 AT1G54730 27.761 335 201 8 7 322 20 332 3.50e-23 100
MS.gene28482.t1 AT3G51490 26.693 251 142 7 23 233 8 256 1.41e-22 101
MS.gene28482.t1 AT3G51490 30.350 257 154 8 224 467 486 730 5.43e-22 99.8
MS.gene28482.t1 AT3G51490 26.693 251 142 7 23 233 8 256 1.48e-22 101
MS.gene28482.t1 AT3G51490 30.242 248 158 6 224 467 486 722 4.83e-20 94.0
MS.gene28482.t1 AT3G51490 30.350 257 154 8 224 467 436 680 5.05e-22 99.8
MS.gene28482.t1 AT3G51490 28.866 194 102 5 76 233 13 206 9.37e-18 86.7
MS.gene28482.t1 AT2G48020 26.882 372 213 10 6 350 19 358 5.09e-21 95.1
MS.gene28482.t1 AT3G05155 25.223 337 205 6 8 324 17 326 7.68e-21 93.6
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.04e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 456 727 8.42e-20 93.2
MS.gene28482.t1 AT4G35300 29.534 193 106 5 30 194 15 205 1.11e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 446 717 8.87e-20 93.2
MS.gene28482.t1 AT4G35300 29.534 193 106 5 30 194 15 205 1.11e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 446 717 8.87e-20 93.2
MS.gene28482.t1 AT4G35300 29.534 193 106 5 30 194 15 205 1.11e-20 95.9
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 446 717 8.87e-20 93.2
MS.gene28482.t1 AT1G54730 27.575 301 181 7 7 288 20 302 6.08e-20 91.3
MS.gene28482.t1 AT1G54730 27.575 301 181 7 7 288 20 302 6.08e-20 91.3
MS.gene28482.t1 AT4G35300 27.336 289 180 7 183 458 259 530 1.12e-19 92.4
MS.gene28482.t1 AT2G48020 26.087 345 198 9 6 325 19 331 3.07e-18 86.7
MS.gene28482.t1 AT1G79820 29.439 214 123 6 6 193 41 252 9.52e-14 73.6
MS.gene28482.t1 AT1G79820 33.113 151 91 3 308 455 297 440 4.75e-11 65.1
MS.gene28482.t1 AT1G79820 33.113 151 91 3 308 455 235 378 7.52e-11 64.3

Find 98 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATGGTGTCCATTGTTTC+TGG 0.176174 8.4:+28627764 MS.gene28482:CDS
TATGTTGCTTTCTTTAATAT+TGG 0.219271 8.4:+28629973 MS.gene28482:CDS
AAAGCTTTGCCTTTAGTTTC+AGG 0.224380 8.4:-28630210 None:intergenic
GTTGTTCATAAAGGAAGATT+TGG 0.239451 8.4:+28628940 MS.gene28482:CDS
ATGTTGCTTTCTTTAATATT+GGG 0.247224 8.4:+28629974 MS.gene28482:CDS
CATCCTTGGTGCAGGTCTAA+TGG 0.255622 8.4:+28629096 MS.gene28482:CDS
AGCACTGGAGGAATGATTAT+TGG 0.255900 8.4:+28629856 MS.gene28482:CDS
ACCATTAAAATCGCGTAGTT+TGG 0.273263 8.4:-28629127 None:intergenic
GATTATTGGGCTTACGCTAT+TGG 0.285439 8.4:+28629870 MS.gene28482:CDS
GTGTCCATTGTTTCTGGTTA+TGG 0.292976 8.4:+28627770 MS.gene28482:CDS
GCTTTCTTTAATATTGGGCT+TGG 0.305984 8.4:+28629979 MS.gene28482:CDS
GAACTATAAACCCAAGTAAT+AGG 0.312160 8.4:-28630003 None:intergenic
CCGGAACTTTGTATTGGTAT+TGG 0.317318 8.4:+28629256 MS.gene28482:CDS
AGGATTCTTAACCTCTTTAC+CGG 0.321405 8.4:+28629237 MS.gene28482:CDS
ATCCTTGGTGCAGGTCTAAT+GGG 0.322241 8.4:+28629097 MS.gene28482:CDS
TTGGGCTTGGGCCTATTACT+TGG 0.331261 8.4:+28629992 MS.gene28482:CDS
ATTGGTATTGGAATCTTGTT+AGG 0.334944 8.4:+28629268 MS.gene28482:CDS
AACTAAAGGCAAAGCTTTAG+AGG 0.338165 8.4:+28630215 MS.gene28482:CDS
GCACTGGAGGAATGATTATT+GGG 0.352513 8.4:+28629857 MS.gene28482:CDS
ATTATTGGGCTTACGCTATT+GGG 0.354837 8.4:+28629871 MS.gene28482:CDS
CTCACCAAGGTGAAGGGGTT+TGG 0.362291 8.4:+28629578 MS.gene28482:CDS
AGGCAAAGCTTTAGAGGAAA+TGG 0.362549 8.4:+28630221 MS.gene28482:CDS
CATGGAAACAACAGCATTCA+TGG 0.369966 8.4:-28630088 None:intergenic
CTTTCTTTAATATTGGGCTT+GGG 0.375420 8.4:+28629980 MS.gene28482:CDS
GCCTCAATATTGTTCATCCT+TGG 0.375575 8.4:+28629082 MS.gene28482:CDS
TTGTTCATAAAGGAAGATTT+GGG 0.381071 8.4:+28628941 MS.gene28482:CDS
GGACACCATTGAAGCAACTA+TGG 0.402346 8.4:-28627753 None:intergenic
TCTTTACCGGAACTTTGTAT+TGG 0.405403 8.4:+28629250 MS.gene28482:CDS
TTGTGCCATAGTTGCTTCAA+TGG 0.411172 8.4:+28627748 MS.gene28482:CDS
TGGGCTTGGGCCTATTACTT+GGG 0.420201 8.4:+28629993 MS.gene28482:CDS
GATATTTCCTTTGAAGTTGA+GGG 0.420965 8.4:+28630029 MS.gene28482:CDS
GGAAGATGTGTTTGTGGTGT+AGG 0.426049 8.4:+28629151 MS.gene28482:CDS
TGGAGCAATGTTGTTCATAA+AGG 0.432311 8.4:+28628931 MS.gene28482:CDS
GAAATTTCAGCTGAATAAAC+CGG 0.433520 8.4:-28629199 None:intergenic
ATCTATAAAGCTATCACAAT+AGG 0.446017 8.4:+28630123 MS.gene28482:CDS
TTGGTTATGCAAGGTCAATT+AGG 0.450727 8.4:+28629424 MS.gene28482:CDS
CCAATACCAATACAAAGTTC+CGG 0.459728 8.4:-28629256 None:intergenic
ACATACTAGACCTTCTGTAT+TGG 0.463685 8.4:-28630297 None:intergenic
TTAAACCTATGTGCATTAGT+AGG 0.465555 8.4:+28629001 MS.gene28482:CDS
ATTTCTTCTGCTTCATCAAG+AGG 0.471846 8.4:+28629217 MS.gene28482:CDS
GGCCCATAAAACGTTTCCGT+TGG 0.479020 8.4:-28629920 None:intergenic
TGGATGTTAATTGCCGCAGT+TGG 0.480949 8.4:+28629637 MS.gene28482:CDS
GGATGTTAATTGCCGCAGTT+GGG 0.482704 8.4:+28629638 MS.gene28482:CDS
ATATTGTTCATCCTTGGTGC+AGG 0.483894 8.4:+28629088 MS.gene28482:CDS
TGTGTTTGTGGTGTAGGTGT+TGG 0.486277 8.4:+28629157 MS.gene28482:CDS
GGTGCAGGTCTAATGGGGTA+TGG 0.502064 8.4:+28629103 MS.gene28482:CDS
GGAAGAACCTCTGATTACAT+TGG 0.503581 8.4:+28629037 MS.gene28482:CDS
CAAAACGCTACTACAAATGA+AGG 0.504432 8.4:-28629370 None:intergenic
CCTTTGAAGTTGAGGGCACA+AGG 0.507181 8.4:+28630036 MS.gene28482:CDS
AGATATTTCCTTTGAAGTTG+AGG 0.507195 8.4:+28630028 MS.gene28482:CDS
GAAGAACCTCTGATTACATT+GGG 0.508270 8.4:+28629038 MS.gene28482:CDS
ATCATCATGATAACAAATCA+AGG 0.511062 8.4:+28627680 None:intergenic
TTACTTGCAACTATTGGAGT+AGG 0.513606 8.4:+28629757 MS.gene28482:CDS
AATATTAAAGAAAGCAACAT+AGG 0.515377 8.4:-28629971 None:intergenic
CATACGTTGCGGCGATGCTA+AGG 0.516416 8.4:-28629948 None:intergenic
TTAGTAGGATCTTTAACAGC+AGG 0.516794 8.4:+28629016 MS.gene28482:CDS
CAAAAGTCTCACCAAGGTGA+AGG 0.519691 8.4:+28629571 MS.gene28482:CDS
AATACAAAGTTCCGGTAAAG+AGG 0.522406 8.4:-28629248 None:intergenic
ATGGTTGGAAGATGTGTTTG+TGG 0.525527 8.4:+28629145 MS.gene28482:CDS
TGCGGCGATGCTAAGGATCA+AGG 0.529053 8.4:-28629941 None:intergenic
ACCAACCACCTTGGTGACTC+AGG 0.530664 8.4:-28629406 None:intergenic
ATAGATTGAAATAAAAGTCA+TGG 0.531568 8.4:-28630106 None:intergenic
AGGGCACAAGGAGCAAGTAT+TGG 0.532018 8.4:+28630048 MS.gene28482:CDS
CTTTCCAAACCCCTTCACCT+TGG 0.537035 8.4:-28629582 None:intergenic
TTAGATACTGGTGTTATGAG+TGG 0.541644 8.4:+28628911 MS.gene28482:intron
AAAAGTCTCACCAAGGTGAA+GGG 0.542978 8.4:+28629572 MS.gene28482:CDS
CTTTGCTCTTATGATAGCAC+CGG 0.543480 8.4:+28629180 MS.gene28482:CDS
CCTTGTGCCCTCAACTTCAA+AGG 0.544461 8.4:-28630036 None:intergenic
TATAAAGCTATCACAATAGG+TGG 0.548135 8.4:+28630126 MS.gene28482:CDS
AGCTTTAGAGGAAATGGAGA+TGG 0.549739 8.4:+28630227 MS.gene28482:CDS
AGCAACTATGGCACAAGCAA+AGG 0.549760 8.4:-28627741 None:intergenic
CTTTGCCTTTAGTTTCAGGA+AGG 0.554311 8.4:-28630206 None:intergenic
GACCAACGCCTTCTGTACGT+TGG 0.561189 8.4:+28629617 MS.gene28482:CDS
AGAAGCAGAACTTCGTCTCA+AGG 0.568665 8.4:+28629489 MS.gene28482:CDS
GCCTGAGTCACCAAGGTGGT+TGG 0.573571 8.4:+28629405 MS.gene28482:CDS
TATCCACCACGGTCAAGCTA+AGG 0.577471 8.4:-28629894 None:intergenic
ACACAACAAGAGGTTCTAGC+AGG 0.599568 8.4:+28628974 MS.gene28482:CDS
AGAAATGGATCCAATACAGA+AGG 0.599938 8.4:+28630287 MS.gene28482:CDS
CCAAGGTGGTTGGTTATGCA+AGG 0.600557 8.4:+28629415 MS.gene28482:CDS
CCTTGCATAACCAACCACCT+TGG 0.601505 8.4:-28629415 None:intergenic
ACCAAGGATGAACAATATTG+AGG 0.606197 8.4:-28629083 None:intergenic
ATTAACATCCAACGTACAGA+AGG 0.606833 8.4:-28629625 None:intergenic
TCCTTGGTGCAGGTCTAATG+GGG 0.608348 8.4:+28629098 MS.gene28482:CDS
AAGATCCTACTAATGCACAT+AGG 0.612414 8.4:-28629006 None:intergenic
GGGCCTTAGCTTGACCGTGG+TGG 0.612776 8.4:+28629891 MS.gene28482:CDS
AAAGTCTCACCAAGGTGAAG+GGG 0.615900 8.4:+28629573 MS.gene28482:CDS
AATCAGTGACACACAACAAG+AGG 0.616657 8.4:+28628964 MS.gene28482:CDS
CGTACCATAACCAGAAACAA+TGG 0.627128 8.4:-28627774 None:intergenic
TCCGTTGGATTTATCCACCA+CGG 0.632136 8.4:-28629905 None:intergenic
ACCGTGGTGGATAAATCCAA+CGG 0.647485 8.4:+28629904 MS.gene28482:CDS
TAACAATGCCTGAGTCACCA+AGG 0.652487 8.4:+28629398 MS.gene28482:CDS
GCGACGCCCAATGTAATCAG+AGG 0.660739 8.4:-28629044 None:intergenic
ATTGGGCCTTAGCTTGACCG+TGG 0.664117 8.4:+28629888 MS.gene28482:CDS
ATCCAACGTACAGAAGGCGT+TGG 0.670561 8.4:-28629619 None:intergenic
ACCCCATTAGACCTGCACCA+AGG 0.701724 8.4:-28629099 None:intergenic
AGCAACATAGGCATACGTTG+CGG 0.714515 8.4:-28629959 None:intergenic
TTACCTCAAAAGTCTCACCA+AGG 0.718107 8.4:+28629565 MS.gene28482:CDS
CAATGCCTGAGTCACCAAGG+TGG 0.763732 8.4:+28629401 MS.gene28482:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAAATAAAATTAAAAG+TGG - chr8.4:28627825-28627844 None:intergenic 10.0%
!! TATGTATATTATTCTTAATA+AGG + chr8.4:28628720-28628739 MS.gene28482:intron 10.0%
!!! TAAGTAAAAAAACTTTTTTT+AGG - chr8.4:28628030-28628049 None:intergenic 10.0%
!!! TATATATCAAACTATTTTAT+GGG + chr8.4:28629292-28629311 MS.gene28482:intron 10.0%
!!! TTATATATCAAACTATTTTA+TGG + chr8.4:28629291-28629310 MS.gene28482:intron 10.0%
!! AAAATGAAAAAATTGAATAG+AGG + chr8.4:28628197-28628216 MS.gene28482:intron 15.0%
!! AAATTGCATTGAAAATTAAA+TGG - chr8.4:28628666-28628685 None:intergenic 15.0%
!! TATTCTTAATAAGGATAATT+TGG + chr8.4:28628729-28628748 MS.gene28482:intron 15.0%
!! TGATATTTCATTCATAATAA+TGG + chr8.4:28628302-28628321 MS.gene28482:intron 15.0%
!!! AAGAACAAATTTTTTGTTTT+CGG + chr8.4:28628548-28628567 MS.gene28482:intron 15.0%
!!! AATAAATTAACTTGAAGAAA+AGG - chr8.4:28628241-28628260 None:intergenic 15.0%
!!! AATTTGAGTTTTTATTTTGA+GGG + chr8.4:28628360-28628379 MS.gene28482:intron 15.0%
!!! ATTATAAACGAAAAACTTTT+AGG + chr8.4:28627951-28627970 MS.gene28482:intron 15.0%
!!! TAATTTGAGTTTTTATTTTG+AGG + chr8.4:28628359-28628378 MS.gene28482:intron 15.0%
!!! TTCAAGTTAATTTATTTTGA+GGG + chr8.4:28628245-28628264 MS.gene28482:intron 15.0%
!!! TTTTTACTTATATTAATGAC+CGG + chr8.4:28628040-28628059 MS.gene28482:intron 15.0%
!! AATATTAAAGAAAGCAACAT+AGG - chr8.4:28629974-28629993 None:intergenic 20.0%
!! ATAATGGTAACAATAAAAGA+AGG + chr8.4:28628318-28628337 MS.gene28482:intron 20.0%
!! ATAGATTGAAATAAAAGTCA+TGG - chr8.4:28630109-28630128 None:intergenic 20.0%
!! TGAGTCAAAAAAAATATTTG+TGG - chr8.4:28628096-28628115 None:intergenic 20.0%
!! TTTGAGTAAGCAAAATATAT+TGG - chr8.4:28628481-28628500 None:intergenic 20.0%
!!! AAATATTTGAGTTTGAAACT+TGG + chr8.4:28629316-28629335 MS.gene28482:intron 20.0%
!!! ACATGATTAATTTTAGATAC+TGG + chr8.4:28628899-28628918 MS.gene28482:intron 20.0%
!!! ATGTTGCTTTCTTTAATATT+GGG + chr8.4:28629974-28629993 MS.gene28482:CDS 20.0%
!!! ATTTTTACCACTTGATTTTT+TGG - chr8.4:28630259-28630278 None:intergenic 20.0%
!!! CAAAAAAATCAAACTTTTTC+TGG + chr8.4:28628497-28628516 MS.gene28482:intron 20.0%
!!! CATTTAACAATTAGTTTATG+TGG + chr8.4:28627976-28627995 MS.gene28482:intron 20.0%
!!! CTTCAAGTTAATTTATTTTG+AGG + chr8.4:28628244-28628263 MS.gene28482:intron 20.0%
!!! TATGTTGCTTTCTTTAATAT+TGG + chr8.4:28629973-28629992 MS.gene28482:CDS 20.0%
!!! TTTTCGTTTATAATTGTGAT+CGG - chr8.4:28627945-28627964 None:intergenic 20.0%
! AAAATCAAGTGGTAAAAATG+TGG + chr8.4:28630260-28630279 MS.gene28482:CDS 25.0%
! AATATGCACTTAAACAACAA+GGG - chr8.4:28628415-28628434 None:intergenic 25.0%
! ACAAAAACATGAATGTAACT+AGG + chr8.4:28628133-28628152 MS.gene28482:intron 25.0%
! ATCTATAAAGCTATCACAAT+AGG + chr8.4:28630123-28630142 MS.gene28482:CDS 25.0%
! GTGGTTAATTGAACTTTATA+TGG + chr8.4:28628168-28628187 MS.gene28482:intron 25.0%
! TAAAAATGTGGCAATAGAAA+TGG + chr8.4:28630272-28630291 MS.gene28482:CDS 25.0%
! TTGTTCATAAAGGAAGATTT+GGG + chr8.4:28628941-28628960 MS.gene28482:CDS 25.0%
!! GTTTTTACCAAAAAATCAAG+TGG + chr8.4:28630249-28630268 MS.gene28482:CDS 25.0%
!! TTCAAACGTGAAACTTATTT+TGG - chr8.4:28628613-28628632 None:intergenic 25.0%
!!! GTTTTTGTTTCTGATTTTTG+TGG - chr8.4:28628121-28628140 None:intergenic 25.0%
!!! TCAAACGTGAAACTTATTTT+GGG - chr8.4:28628612-28628631 None:intergenic 25.0%
!!! TTGTTTTTACTTGACAAACT+TGG + chr8.4:28629811-28629830 MS.gene28482:CDS 25.0%
ATATGCACTTAAACAACAAG+GGG - chr8.4:28628414-28628433 None:intergenic 30.0%
CAATATGCACTTAAACAACA+AGG - chr8.4:28628416-28628435 None:intergenic 30.0%
CTTTCTTTAATATTGGGCTT+GGG + chr8.4:28629980-28629999 MS.gene28482:CDS 30.0%
GAAATTTCAGCTGAATAAAC+CGG - chr8.4:28629202-28629221 None:intergenic 30.0%
GAACTATAAACCCAAGTAAT+AGG - chr8.4:28630006-28630025 None:intergenic 30.0%
GTTGTTCATAAAGGAAGATT+TGG + chr8.4:28628940-28628959 MS.gene28482:CDS 30.0%
TATAAAGCTATCACAATAGG+TGG + chr8.4:28630126-28630145 MS.gene28482:CDS 30.0%
TCACAAATAAAACACAGACA+TGG + chr8.4:28628846-28628865 MS.gene28482:intron 30.0%
TTAAACCTATGTGCATTAGT+AGG + chr8.4:28629001-28629020 MS.gene28482:CDS 30.0%
TTACTTATATTAATGACCGG+AGG + chr8.4:28628043-28628062 MS.gene28482:intron 30.0%
! AAGCTTTTACTTGCAACTAT+TGG + chr8.4:28629751-28629770 MS.gene28482:CDS 30.0%
! ATTGGTATTGGAATCTTGTT+AGG + chr8.4:28629268-28629287 MS.gene28482:CDS 30.0%
! ATTTGAGTTTGAAACTTGGT+TGG + chr8.4:28629320-28629339 MS.gene28482:intron 30.0%
! CCAAGAATTTTCAAAAAAGC+TGG + chr8.4:28629712-28629731 MS.gene28482:CDS 30.0%
! TTTTACTTGACAAACTTGGT+AGG + chr8.4:28629815-28629834 MS.gene28482:CDS 30.0%
! TTTTTCCTTCCTGAAACTAA+AGG + chr8.4:28630201-28630220 MS.gene28482:CDS 30.0%
!! AGATATTTCCTTTGAAGTTG+AGG + chr8.4:28630028-28630047 MS.gene28482:CDS 30.0%
!! GATATTTCCTTTGAAGTTGA+GGG + chr8.4:28630029-28630048 MS.gene28482:CDS 30.0%
!!! AACTAGGTATTGTTTTTACG+TGG + chr8.4:28628149-28628168 MS.gene28482:intron 30.0%
!!! CCAGCTTTTTTGAAAATTCT+TGG - chr8.4:28629715-28629734 None:intergenic 30.0%
AAGATCCTACTAATGCACAT+AGG - chr8.4:28629009-28629028 None:intergenic 35.0%
AAGGATATAAAAATCGCTGC+TGG + chr8.4:28629508-28629527 MS.gene28482:CDS 35.0%
AATACAAAGTTCCGGTAAAG+AGG - chr8.4:28629251-28629270 None:intergenic 35.0%
ACCAAGGATGAACAATATTG+AGG - chr8.4:28629086-28629105 None:intergenic 35.0%
ACCATTAAAATCGCGTAGTT+TGG - chr8.4:28629130-28629149 None:intergenic 35.0%
AGAAATGGATCCAATACAGA+AGG + chr8.4:28630287-28630306 MS.gene28482:CDS 35.0%
AGGATTCTTAACCTCTTTAC+CGG + chr8.4:28629237-28629256 MS.gene28482:CDS 35.0%
ATTAACATCCAACGTACAGA+AGG - chr8.4:28629628-28629647 None:intergenic 35.0%
ATTATTGGGCTTACGCTATT+GGG + chr8.4:28629871-28629890 MS.gene28482:CDS 35.0%
ATTTCTTCTGCTTCATCAAG+AGG + chr8.4:28629217-28629236 MS.gene28482:CDS 35.0%
CAAAACGCTACTACAAATGA+AGG - chr8.4:28629373-28629392 None:intergenic 35.0%
CCAATACCAATACAAAGTTC+CGG - chr8.4:28629259-28629278 None:intergenic 35.0%
GAAAAAATGAATCCCAACTG+CGG - chr8.4:28629653-28629672 None:intergenic 35.0%
GAAGAACCTCTGATTACATT+GGG + chr8.4:28629038-28629057 MS.gene28482:CDS 35.0%
GCTTTCTTTAATATTGGGCT+TGG + chr8.4:28629979-28629998 MS.gene28482:CDS 35.0%
TCGATGAGTAAGTAAGGTAT+GGG - chr8.4:28628006-28628025 None:intergenic 35.0%
TCGTTTATAATTGTGATCGG+AGG - chr8.4:28627942-28627961 None:intergenic 35.0%
TCTTTACCGGAACTTTGTAT+TGG + chr8.4:28629250-28629269 MS.gene28482:CDS 35.0%
TGGAGCAATGTTGTTCATAA+AGG + chr8.4:28628931-28628950 MS.gene28482:CDS 35.0%
TTACTTGCAACTATTGGAGT+AGG + chr8.4:28629757-28629776 MS.gene28482:CDS 35.0%
TTAGGTTCGATGAGTAAGTA+AGG - chr8.4:28628012-28628031 None:intergenic 35.0%
TTAGTAGGATCTTTAACAGC+AGG + chr8.4:28629016-28629035 MS.gene28482:CDS 35.0%
TTCGATGAGTAAGTAAGGTA+TGG - chr8.4:28628007-28628026 None:intergenic 35.0%
TTGGTTATGCAAGGTCAATT+AGG + chr8.4:28629424-28629443 MS.gene28482:CDS 35.0%
! AAAGCTTTGCCTTTAGTTTC+AGG - chr8.4:28630213-28630232 None:intergenic 35.0%
! AACTAAAGGCAAAGCTTTAG+AGG + chr8.4:28630215-28630234 MS.gene28482:CDS 35.0%
! AATCCAACGGAAACGTTTTA+TGG + chr8.4:28629917-28629936 MS.gene28482:CDS 35.0%
! ACGATGCTTATTTAAGACGT+GGG + chr8.4:28628817-28628836 MS.gene28482:intron 35.0%
! AGACTTTTGCAAATTAGCAC+TGG + chr8.4:28629841-28629860 MS.gene28482:CDS 35.0%
! ATCCAACGGAAACGTTTTAT+GGG + chr8.4:28629918-28629937 MS.gene28482:CDS 35.0%
! ATGTTACTTGATCCCACTTA+GGG - chr8.4:28628578-28628597 None:intergenic 35.0%
! TACGATGCTTATTTAAGACG+TGG + chr8.4:28628816-28628835 MS.gene28482:intron 35.0%
! TATGTTACTTGATCCCACTT+AGG - chr8.4:28628579-28628598 None:intergenic 35.0%
! TCCAAACTACGCGATTTTAA+TGG + chr8.4:28629126-28629145 MS.gene28482:CDS 35.0%
! TTTTGTCTTGAGTAATCCTC+CGG - chr8.4:28628062-28628081 None:intergenic 35.0%
!! AACTACGCGATTTTAATGGT+TGG + chr8.4:28629130-28629149 MS.gene28482:CDS 35.0%
!! TTAGATACTGGTGTTATGAG+TGG + chr8.4:28628911-28628930 MS.gene28482:intron 35.0%
!!! ACGTGAAACTTATTTTGGGA+AGG - chr8.4:28628608-28628627 None:intergenic 35.0%
!!! CATTTTTTCGAACATGCAAC+TGG + chr8.4:28629664-28629683 MS.gene28482:CDS 35.0%
!!! CTGGTATATCTGTTTTAGCT+TGG + chr8.4:28630166-28630185 MS.gene28482:CDS 35.0%
!!! GAAACTTATTTTGGGAAGGA+GGG - chr8.4:28628604-28628623 None:intergenic 35.0%
!!! GGAAGTTTTTTCATGTTTGC+TGG + chr8.4:28630147-28630166 MS.gene28482:CDS 35.0%
!!! TGAAACTTATTTTGGGAAGG+AGG - chr8.4:28628605-28628624 None:intergenic 35.0%
AAAAGTCTCACCAAGGTGAA+GGG + chr8.4:28629572-28629591 MS.gene28482:CDS 40.0%
AATCAGTGACACACAACAAG+AGG + chr8.4:28628964-28628983 MS.gene28482:CDS 40.0%
ATGGTTGGAAGATGTGTTTG+TGG + chr8.4:28629145-28629164 MS.gene28482:CDS 40.0%
CATGGAAACAACAGCATTCA+TGG - chr8.4:28630091-28630110 None:intergenic 40.0%
CGATGAGTAAGTAAGGTATG+GGG - chr8.4:28628005-28628024 None:intergenic 40.0%
CGTACCATAACCAGAAACAA+TGG - chr8.4:28627777-28627796 None:intergenic 40.0%
CTTGGTTGGAGATTAATGCT+TGG + chr8.4:28629334-28629353 MS.gene28482:intron 40.0%
CTTTGCTCTTATGATAGCAC+CGG + chr8.4:28629180-28629199 MS.gene28482:CDS 40.0%
GATTATTGGGCTTACGCTAT+TGG + chr8.4:28629870-28629889 MS.gene28482:CDS 40.0%
GCACTGGAGGAATGATTATT+GGG + chr8.4:28629857-28629876 MS.gene28482:CDS 40.0%
GCCTCAATATTGTTCATCCT+TGG + chr8.4:28629082-28629101 MS.gene28482:CDS 40.0%
GGAAGAACCTCTGATTACAT+TGG + chr8.4:28629037-28629056 MS.gene28482:CDS 40.0%
TCAATGGTGTCCATTGTTTC+TGG + chr8.4:28627764-28627783 MS.gene28482:CDS 40.0%
TTACCTCAAAAGTCTCACCA+AGG + chr8.4:28629565-28629584 MS.gene28482:CDS 40.0%
TTGTGCCATAGTTGCTTCAA+TGG + chr8.4:28627748-28627767 MS.gene28482:CDS 40.0%
! AGCACTGGAGGAATGATTAT+TGG + chr8.4:28629856-28629875 MS.gene28482:CDS 40.0%
! AGGGATTCAAGTTTAGTGAC+CGG + chr8.4:28628379-28628398 MS.gene28482:intron 40.0%
! ATATTGTTCATCCTTGGTGC+AGG + chr8.4:28629088-28629107 MS.gene28482:CDS 40.0%
! CCGGAACTTTGTATTGGTAT+TGG + chr8.4:28629256-28629275 MS.gene28482:CDS 40.0%
! CTTTGCCTTTAGTTTCAGGA+AGG - chr8.4:28630209-28630228 None:intergenic 40.0%
! GTTTTCGGTTTTCCCTAAGT+GGG + chr8.4:28628563-28628582 MS.gene28482:intron 40.0%
! TGTTTTCGGTTTTCCCTAAG+TGG + chr8.4:28628562-28628581 MS.gene28482:intron 40.0%
!! AGCTTTAGAGGAAATGGAGA+TGG + chr8.4:28630227-28630246 MS.gene28482:CDS 40.0%
!! AGGCAAAGCTTTAGAGGAAA+TGG + chr8.4:28630221-28630240 MS.gene28482:CDS 40.0%
!! CTTTTGCAAATTAGCACTGG+AGG + chr8.4:28629844-28629863 MS.gene28482:CDS 40.0%
!! GTGTCCATTGTTTCTGGTTA+TGG + chr8.4:28627770-28627789 MS.gene28482:CDS 40.0%
AAAGTCTCACCAAGGTGAAG+GGG + chr8.4:28629573-28629592 MS.gene28482:CDS 45.0%
AGAAGCAGAACTTCGTCTCA+AGG + chr8.4:28629489-28629508 MS.gene28482:CDS 45.0%
AGCAACATAGGCATACGTTG+CGG - chr8.4:28629962-28629981 None:intergenic 45.0%
AGCAACTATGGCACAAGCAA+AGG - chr8.4:28627744-28627763 None:intergenic 45.0%
CAAAAGTCTCACCAAGGTGA+AGG + chr8.4:28629571-28629590 MS.gene28482:CDS 45.0%
CAACAAGGGGATCAAGAAAC+CGG - chr8.4:28628401-28628420 None:intergenic 45.0%
GGAAGATGTGTTTGTGGTGT+AGG + chr8.4:28629151-28629170 MS.gene28482:CDS 45.0%
GGACACCATTGAAGCAACTA+TGG - chr8.4:28627756-28627775 None:intergenic 45.0%
GGATGTTAATTGCCGCAGTT+GGG + chr8.4:28629638-28629657 MS.gene28482:CDS 45.0%
TAACAATGCCTGAGTCACCA+AGG + chr8.4:28629398-28629417 MS.gene28482:CDS 45.0%
TCCGTTGGATTTATCCACCA+CGG - chr8.4:28629908-28629927 None:intergenic 45.0%
TGGATGTTAATTGCCGCAGT+TGG + chr8.4:28629637-28629656 MS.gene28482:CDS 45.0%
TGTGTTTGTGGTGTAGGTGT+TGG + chr8.4:28629157-28629176 MS.gene28482:CDS 45.0%
! ACACAACAAGAGGTTCTAGC+AGG + chr8.4:28628974-28628993 MS.gene28482:CDS 45.0%
! ATCCTTGGTGCAGGTCTAAT+GGG + chr8.4:28629097-28629116 MS.gene28482:CDS 45.0%
! TCACCTTGGTGAGACTTTTG+AGG - chr8.4:28629571-28629590 None:intergenic 45.0%
!! ACCGTGGTGGATAAATCCAA+CGG + chr8.4:28629904-28629923 MS.gene28482:CDS 45.0%
!! AAAAGAAAAAAAAAATTTAT+TGG - chr8.4:28627873-28627892 None:intergenic 5.0%
AGGGCACAAGGAGCAAGTAT+TGG + chr8.4:28630048-28630067 MS.gene28482:CDS 50.0%
CCTTGCATAACCAACCACCT+TGG - chr8.4:28629418-28629437 None:intergenic 50.0%
CCTTGTGCCCTCAACTTCAA+AGG - chr8.4:28630039-28630058 None:intergenic 50.0%
CTTTCCAAACCCCTTCACCT+TGG - chr8.4:28629585-28629604 None:intergenic 50.0%
GGCCCATAAAACGTTTCCGT+TGG - chr8.4:28629923-28629942 None:intergenic 50.0%
TATCCACCACGGTCAAGCTA+AGG - chr8.4:28629897-28629916 None:intergenic 50.0%
TGGGCTTGGGCCTATTACTT+GGG + chr8.4:28629993-28630012 MS.gene28482:CDS 50.0%
TTGGGCTTGGGCCTATTACT+TGG + chr8.4:28629992-28630011 MS.gene28482:CDS 50.0%
! ATCCAACGTACAGAAGGCGT+TGG - chr8.4:28629622-28629641 None:intergenic 50.0%
! CATCCTTGGTGCAGGTCTAA+TGG + chr8.4:28629096-28629115 MS.gene28482:CDS 50.0%
! CCAAGGTGGTTGGTTATGCA+AGG + chr8.4:28629415-28629434 MS.gene28482:CDS 50.0%
! TCCTTGGTGCAGGTCTAATG+GGG + chr8.4:28629098-28629117 MS.gene28482:CDS 50.0%
!! CCTTTGAAGTTGAGGGCACA+AGG + chr8.4:28630036-28630055 MS.gene28482:CDS 50.0%
ACCCCATTAGACCTGCACCA+AGG - chr8.4:28629102-28629121 None:intergenic 55.0%
CAATGCCTGAGTCACCAAGG+TGG + chr8.4:28629401-28629420 MS.gene28482:CDS 55.0%
CATACGTTGCGGCGATGCTA+AGG - chr8.4:28629951-28629970 None:intergenic 55.0%
CTCACCAAGGTGAAGGGGTT+TGG + chr8.4:28629578-28629597 MS.gene28482:CDS 55.0%
GACCAACGCCTTCTGTACGT+TGG + chr8.4:28629617-28629636 MS.gene28482:CDS 55.0%
GCGACGCCCAATGTAATCAG+AGG - chr8.4:28629047-28629066 None:intergenic 55.0%
GGTGCAGGTCTAATGGGGTA+TGG + chr8.4:28629103-28629122 MS.gene28482:CDS 55.0%
TGCGGCGATGCTAAGGATCA+AGG - chr8.4:28629944-28629963 None:intergenic 55.0%
! ACCAACCACCTTGGTGACTC+AGG - chr8.4:28629409-28629428 None:intergenic 55.0%
! ATTGGGCCTTAGCTTGACCG+TGG + chr8.4:28629888-28629907 MS.gene28482:CDS 55.0%
GCCTGAGTCACCAAGGTGGT+TGG + chr8.4:28629405-28629424 MS.gene28482:CDS 60.0%
! GGGCCTTAGCTTGACCGTGG+TGG + chr8.4:28629891-28629910 MS.gene28482:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 28627686 28630314 28627686 ID=MS.gene28482
chr8.4 mRNA 28627686 28630314 28627686 ID=MS.gene28482.t1;Parent=MS.gene28482
chr8.4 exon 28627686 28627791 28627686 ID=MS.gene28482.t1.exon1;Parent=MS.gene28482.t1
chr8.4 CDS 28627686 28627791 28627686 ID=cds.MS.gene28482.t1;Parent=MS.gene28482.t1
chr8.4 exon 28628915 28629289 28628915 ID=MS.gene28482.t1.exon2;Parent=MS.gene28482.t1
chr8.4 CDS 28628915 28629289 28628915 ID=cds.MS.gene28482.t1;Parent=MS.gene28482.t1
chr8.4 exon 28629365 28630314 28629365 ID=MS.gene28482.t1.exon3;Parent=MS.gene28482.t1
chr8.4 CDS 28629365 28630314 28629365 ID=cds.MS.gene28482.t1;Parent=MS.gene28482.t1
Gene Sequence

>MS.gene28482

ATGATAACAAATCAAGGTGATAAAGAAGATCAAACGAACACGTTCAACAAATATGCCTTTGCTTGTGCCATAGTTGCTTCAATGGTGTCCATTGTTTCTGGTTATGGTACGTAATTATCGCATTCTCTAATCTCTTCCACTTTTAATTTTATTTACTTTCGCTATTGTTTCACTATTCATTGTTCCAATAAATTTTTTTTTTCTTTTGTAGTTTTCACTAATTTGTTATCTCTACATGTCAAAATACATACTTCCTCCGATCACAATTATAAACGAAAAACTTTTAGGTTCATTTAACAATTAGTTTATGTGGTGACCCCATACCTTACTTACTCATCGAACCTAAAAAAAGTTTTTTTACTTATATTAATGACCGGAGGATTACTCAAGACAAAACGTTCAAGTAGCCACAAATATTTTTTTTGACTCAAACCACAAAAATCAGAAACAAAAACATGAATGTAACTAGGTATTGTTTTTACGTGGTTAATTGAACTTTATATGGTAAACTAAAATGAAAAAATTGAATAGAGGTTGTATTTCATATCAAAACCTTTTCTTCAAGTTAATTTATTTTGAGGGATTCGATTTTTTTTTATTTACACAAATAAACTTATGATATTTCATTCATAATAATGGTAACAATAAAAGAAGGAATGAATCACTTGAAAGTTAATTTGAGTTTTTATTTTGAGGGATTCAAGTTTAGTGACCGGTTTCTTGATCCCCTTGTTGTTTAAGTGCATATTGAAAGAAATCTTTTATGCAACTAGTTTGCGTACTCATTGTACACCAATATATTTTGCTTACTCAAAAAAATCAAACTTTTTCTGGTTAACATCAATGTTTTTGTTGTTGTTGTAAGAACAAATTTTTTGTTTTCGGTTTTCCCTAAGTGGGATCAAGTAACATACTCCCTCCTTCCCAAAATAAGTTTCACGTTTGAAAAAAAATAATTTGTTTCAAAAATAATTTTTCCATTTAATTTTCAATGCAATTTTTTTTTTTTTTTTAACTTACTCTCAAATTAATATTATGTATATTATTCTTAATAAGGATAATTTGGTAAAATTATTATTTTCACTCTTTCGTGTATCTTCTTTTCTTAATATATATGTGAAATAATCAAATACGATGCTTATTTAAGACGTGGGAGACTCTCACAAATAAAACACAGACATGGTAGACATATTTGACTCTAACTATTACACATACATGATTAATTTTAGATACTGGTGTTATGAGTGGAGCAATGTTGTTCATAAAGGAAGATTTGGGAATCAGTGACACACAACAAGAGGTTCTAGCAGGAATCTTAAACCTATGTGCATTAGTAGGATCTTTAACAGCAGGAAGAACCTCTGATTACATTGGGCGTCGCTACACAATCTTCTTAGCCTCAATATTGTTCATCCTTGGTGCAGGTCTAATGGGGTATGGTCCAAACTACGCGATTTTAATGGTTGGAAGATGTGTTTGTGGTGTAGGTGTTGGCTTTGCTCTTATGATAGCACCGGTTTATTCAGCTGAAATTTCTTCTGCTTCATCAAGAGGATTCTTAACCTCTTTACCGGAACTTTGTATTGGTATTGGAATCTTGTTAGGTTATATATCAAACTATTTTATGGGAAAATATTTGAGTTTGAAACTTGGTTGGAGATTAATGCTTGGTATTGCAGCTTTGCCTTCATTTGTAGTAGCGTTTTGTATTTTAACAATGCCTGAGTCACCAAGGTGGTTGGTTATGCAAGGTCAATTAGGAAAAGCAAAAAAAGTTCTATTGCAAGTCTCAAACACAACGCAAGAAGCAGAACTTCGTCTCAAGGATATAAAAATCGCTGCTGGTTTAGACGAAAATTGCAATGATGAAATTGTGAAGTTACCTCAAAAGTCTCACCAAGGTGAAGGGGTTTGGAAAGAGTTGATTTTAAGACCAACGCCTTCTGTACGTTGGATGTTAATTGCCGCAGTTGGGATTCATTTTTTCGAACATGCAACTGGTATTGAAGCTGTTATGTTATATAGTCCAAGAATTTTCAAAAAAGCTGGTGTTACAAGTAAAGAAAAGCTTTTACTTGCAACTATTGGAGTAGGTTTAACAAAAATTGTTTTTCTTTTAATTGCTTTGTTTTTACTTGACAAACTTGGTAGGAGAAGACTTTTGCAAATTAGCACTGGAGGAATGATTATTGGGCTTACGCTATTGGGCCTTAGCTTGACCGTGGTGGATAAATCCAACGGAAACGTTTTATGGGCCTTGATCCTTAGCATCGCCGCAACGTATGCCTATGTTGCTTTCTTTAATATTGGGCTTGGGCCTATTACTTGGGTTTATAGTTCAGAGATATTTCCTTTGAAGTTGAGGGCACAAGGAGCAAGTATTGGAGTTGCTGTGAATAGAACCATGAATGCTGTTGTTTCCATGACTTTTATTTCAATCTATAAAGCTATCACAATAGGTGGAAGTTTTTTCATGTTTGCTGGTATATCTGTTTTAGCTTGGTTGTTTTTCTACTTTTTCCTTCCTGAAACTAAAGGCAAAGCTTTAGAGGAAATGGAGATGGTTTTTACCAAAAAATCAAGTGGTAAAAATGTGGCAATAGAAATGGATCCAATACAGAAGGTCTAG

Protein sequence

>MS.gene28482.t1

MITNQGDKEDQTNTFNKYAFACAIVASMVSIVSGYDTGVMSGAMLFIKEDLGISDTQQEVLAGILNLCALVGSLTAGRTSDYIGRRYTIFLASILFILGAGLMGYGPNYAILMVGRCVCGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLALPSFVVAFCILTMPESPRWLVMQGQLGKAKKVLLQVSNTTQEAELRLKDIKIAAGLDENCNDEIVKLPQKSHQGEGVWKELILRPTPSVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKEKLLLATIGVGLTKIVFLLIALFLLDKLGRRRLLQISTGGMIIGLTLLGLSLTVVDKSNGNVLWALILSIAATYAYVAFFNIGLGPITWVYSSEIFPLKLRAQGASIGVAVNRTMNAVVSMTFISIYKAITIGGSFFMFAGISVLAWLFFYFFLPETKGKALEEMEMVFTKKSSGKNVAIEMDPIQKV