AlfalfaGEDB | MS.gene88587

M. sativa cultivar XinJiangDaYe / MS.gene88587

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88587.t1	XP_003589734.2	97.1	512	15	0	1	512	1	512	1.20E-284	988.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88587.t1	Q9LT15	71.0	510	144	3	1	507	1	509	1.6e-208	726.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88587.t1	G7IBF1	97.1	512	15	0	1	512	1	512	8.9e-285	988.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene072436	MS.gene88587	PPI
MS.gene25807	MS.gene88587	PPI
MS.gene88587	MS.gene28482	PPI
MS.gene021157	MS.gene88587	PPI
MS.gene88587	MS.gene91107	PPI
MS.gene88587	MS.gene056687	PPI
MS.gene88587	MS.gene41130	PPI
MS.gene88587	MS.gene29636	PPI
MS.gene42509	MS.gene88587	PPI
MS.gene88587	MS.gene036638	PPI
MS.gene88587	MS.gene072437	PPI
MS.gene026189	MS.gene88587	PPI
MS.gene26968	MS.gene88587	PPI
MS.gene88587	MS.gene87411	PPI
MS.gene47969	MS.gene88587	PPI
MS.gene006547	MS.gene88587	PPI
MS.gene88587	MS.gene017905	PPI
MS.gene041500	MS.gene88587	PPI
MS.gene88587	MS.gene026188	PPI
MS.gene88587	MS.gene55173	PPI
MS.gene88587	MS.gene00961	PPI
MS.gene88587	MS.gene066530	PPI
MS.gene88587	MS.gene80690	PPI
MS.gene036548	MS.gene88587	PPI
MS.gene88587	MS.gene57358	PPI
MS.gene88587	MS.gene29241	PPI
MS.gene017222	MS.gene88587	PPI
MS.gene065882	MS.gene88587	PPI
MS.gene91109	MS.gene88587	PPI
MS.gene018060	MS.gene88587	PPI
MS.gene88587	MS.gene32188	PPI
MS.gene63888	MS.gene88587	PPI
MS.gene88587	MS.gene24951	PPI
MS.gene002806	MS.gene88587	PPI
MS.gene88587	MS.gene014127	PPI
MS.gene88587	MS.gene56211	PPI
MS.gene88587	MS.gene33740	PPI
MS.gene88587	MS.gene009409	PPI
MS.gene81380	MS.gene88587	PPI
MS.gene058372	MS.gene88587	PPI
MS.gene29304	MS.gene88587	PPI
MS.gene78329	MS.gene88587	PPI
MS.gene29240	MS.gene88587	PPI
MS.gene88587	MS.gene57711	PPI
MS.gene88587	MS.gene72918	PPI
MS.gene80819	MS.gene88587	PPI
MS.gene88587	MS.gene91108	PPI
MS.gene70727	MS.gene88587	PPI
MS.gene062929	MS.gene88587	PPI
MS.gene88587	MS.gene55171	PPI
MS.gene88587	MS.gene90685	PPI
MS.gene50704	MS.gene88587	PPI
MS.gene27308	MS.gene88587	PPI
MS.gene88587	MS.gene04694	PPI
MS.gene88587	MS.gene006546	PPI
MS.gene52737	MS.gene88587	PPI
MS.gene88587	MS.gene23356	PPI
MS.gene88587	MS.gene068273	PPI
MS.gene88587	MS.gene48055	PPI
MS.gene88587	MS.gene45698	PPI
MS.gene88587	MS.gene66840	PPI
MS.gene88587	MS.gene88585	PPI
MS.gene88587	MS.gene42511	PPI
MS.gene026190	MS.gene88587	PPI
MS.gene88587	MS.gene30558	PPI
MS.gene56212	MS.gene88587	PPI
MS.gene33406	MS.gene88587	PPI
MS.gene030874	MS.gene88587	PPI
MS.gene88587	MS.gene003775	PPI
MS.gene88587	MS.gene060358	PPI
MS.gene78327	MS.gene88587	PPI
MS.gene84416	MS.gene88587	PPI
MS.gene88587	MS.gene29303	PPI
MS.gene88587	MS.gene24272	PPI
MS.gene88587	MS.gene004000	PPI
MS.gene88587	MS.gene020721	PPI
MS.gene88587	MS.gene068492	PPI
MS.gene88587	MS.gene069970	PPI
MS.gene88587	MS.gene98665	PPI
MS.gene052538	MS.gene88587	PPI
MS.gene88587	MS.gene044198	PPI
MS.gene28665	MS.gene88587	PPI
MS.gene88586	MS.gene88587	PPI
MS.gene88587	MS.gene018043	PPI
MS.gene88587	MS.gene014297	PPI
MS.gene066532	MS.gene88587	PPI
MS.gene014297	MS.gene88587	PPI
MS.gene88587	MS.gene52719	PPI
MS.gene88587	MS.gene58760	PPI
MS.gene065799	MS.gene88587	PPI
MS.gene50065	MS.gene88587	PPI
MS.gene055946	MS.gene88587	PPI
MS.gene88587	MS.gene78842	PPI
MS.gene27999	MS.gene88587	PPI
MS.gene76380	MS.gene88587	PPI
MS.gene88587	MS.gene32215	PPI
MS.gene88587	MS.gene003641	PPI
MS.gene88587	MS.gene29239	PPI
MS.gene88587	MS.gene073258	PPI
MS.gene004491	MS.gene88587	PPI
MS.gene04674	MS.gene88587	PPI
MS.gene88587	MS.gene066531	PPI
MS.gene041419	MS.gene88587	PPI
MS.gene88587	MS.gene031757	PPI
MS.gene011944	MS.gene88587	PPI
MS.gene88587	MS.gene78328	PPI
MS.gene88587	MS.gene049813	PPI
MS.gene88587	MS.gene26272	PPI
MS.gene88587	MS.gene04695	PPI
MS.gene064881	MS.gene88587	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88587.t1	MTR_1g038630	97.070	512	15	0	1	512	1	512	0.0	1019
MS.gene88587.t1	MTR_1g038600	93.945	512	13	1	1	512	1	494	0.0	974
MS.gene88587.t1	MTR_5g082540	78.501	507	109	0	1	507	1	507	0.0	815
MS.gene88587.t1	MTR_4g091370	64.706	493	168	4	13	500	13	504	0.0	615
MS.gene88587.t1	MTR_3g008160	58.943	492	196	4	13	501	13	501	0.0	605
MS.gene88587.t1	MTR_0009s0370	59.000	500	200	3	1	497	1	498	0.0	600
MS.gene88587.t1	MTR_5g041550	61.924	499	186	3	3	497	2	500	0.0	597
MS.gene88587.t1	MTR_3g093010	59.216	510	202	3	3	506	2	511	0.0	594
MS.gene88587.t1	MTR_4g090600	62.272	493	181	4	11	500	11	501	0.0	587
MS.gene88587.t1	MTR_5g006070	55.689	501	212	4	14	511	13	506	0.0	585
MS.gene88587.t1	MTR_0204s0020	56.173	486	208	3	14	498	12	493	0.0	580
MS.gene88587.t1	MTR_0204s0020	55.761	486	207	4	14	498	12	490	0.0	570
MS.gene88587.t1	MTR_5g094760	54.563	504	219	4	3	500	2	501	0.0	570
MS.gene88587.t1	MTR_3g023480	57.959	490	203	2	14	500	12	501	0.0	568
MS.gene88587.t1	MTR_1g104770	55.200	500	220	3	1	497	1	499	0.0	565
MS.gene88587.t1	MTR_1g104750	53.800	500	226	4	1	497	1	498	0.0	562
MS.gene88587.t1	MTR_7g091690	56.289	485	207	4	15	498	19	499	0.0	561
MS.gene88587.t1	MTR_3g008170	55.664	512	220	5	1	508	1	509	0.0	558
MS.gene88587.t1	MTR_3g008160	58.901	455	181	4	50	501	1	452	0.0	552
MS.gene88587.t1	MTR_6g087040	53.465	505	227	5	1	500	1	502	0.0	545
MS.gene88587.t1	MTR_6g088375	53.465	505	227	5	1	500	1	502	0.0	545
MS.gene88587.t1	MTR_4g116790	51.303	499	238	4	2	499	6	500	0.0	542
MS.gene88587.t1	MTR_1g104780	54.076	503	222	4	13	507	12	513	0.0	539
MS.gene88587.t1	MTR_0204s0040	51.400	500	238	4	4	502	10	505	0.0	537
MS.gene88587.t1	MTR_4g116770	51.400	500	238	4	4	502	206	701	0.0	536
MS.gene88587.t1	MTR_5g006070	55.699	465	196	4	50	511	1	458	0.0	536
MS.gene88587.t1	MTR_8g102860	53.082	503	228	5	15	512	18	517	0.0	535
MS.gene88587.t1	MTR_3g007910	54.724	508	195	6	3	507	2	477	0.0	531
MS.gene88587.t1	MTR_3g093060	58.758	451	182	3	50	496	1	451	0.0	516
MS.gene88587.t1	MTR_3g074390	49.287	491	245	3	14	502	19	507	1.22e-177	509
MS.gene88587.t1	MTR_3g074410	48.692	497	249	4	14	508	16	508	2.85e-172	496
MS.gene88587.t1	MTR_8g102860	52.350	468	215	5	50	512	1	465	2.25e-170	489
MS.gene88587.t1	MTR_3g074270	46.988	498	241	3	1	497	1	476	1.89e-165	477
MS.gene88587.t1	MTR_4g116790	51.381	362	173	3	2	362	6	365	9.20e-133	390
MS.gene88587.t1	MTR_3g074380	49.858	351	172	3	14	362	17	365	1.18e-121	361
MS.gene88587.t1	MTR_3g074320	45.625	320	171	3	189	506	20	338	1.72e-100	306
MS.gene88587.t1	MTR_3g074370	45.397	315	170	2	189	501	20	334	1.85e-99	303
MS.gene88587.t1	MTR_3g074340	45.312	320	172	3	189	506	20	338	1.89e-99	303
MS.gene88587.t1	MTR_3g074400	37.391	460	227	12	50	485	1	423	1.26e-86	273
MS.gene88587.t1	MTR_1g038620	80.380	158	14	1	203	360	50	190	6.32e-80	248
MS.gene88587.t1	MTR_4g069500	28.015	539	336	9	1	511	1	515	8.71e-59	203
MS.gene88587.t1	MTR_6g088450	30.372	484	285	11	13	476	48	499	9.17e-57	197
MS.gene88587.t1	MTR_4g072030	29.703	505	303	12	27	508	31	506	1.92e-56	197
MS.gene88587.t1	MTR_4g069500	29.386	456	298	6	77	511	13	465	1.02e-55	194
MS.gene88587.t1	MTR_5g096000	54.144	181	63	1	3	183	2	162	5.83e-54	184
MS.gene88587.t1	MTR_5g096000	54.430	158	67	2	355	507	151	308	1.90e-38	143
MS.gene88587.t1	MTR_3g084110	27.621	496	326	9	20	507	25	495	1.55e-53	188
MS.gene88587.t1	MTR_3g116240	27.921	505	313	10	7	484	8	488	7.14e-53	187
MS.gene88587.t1	MTR_5g075300	31.299	508	295	12	7	487	2	482	3.86e-52	184
MS.gene88587.t1	MTR_6g018790	29.436	479	299	8	16	490	102	545	4.48e-52	186
MS.gene88587.t1	MTR_1g116660	27.311	476	317	9	21	490	33	485	3.03e-51	182
MS.gene88587.t1	MTR_7g446340	26.978	493	315	12	12	490	44	505	9.18e-51	181
MS.gene88587.t1	MTR_6g007340	26.978	493	315	12	12	490	44	505	9.18e-51	181
MS.gene88587.t1	MTR_8g103500	28.831	496	300	13	13	487	8	471	2.06e-50	180
MS.gene88587.t1	MTR_1g116650	27.883	477	302	8	20	490	75	515	4.92e-50	180
MS.gene88587.t1	MTR_7g005910	27.521	476	317	7	20	490	30	482	1.17e-49	178
MS.gene88587.t1	MTR_8g077890	29.032	496	291	11	22	487	18	482	1.28e-49	178
MS.gene88587.t1	MTR_7g082270	28.330	473	302	8	16	485	62	500	3.73e-49	177
MS.gene88587.t1	MTR_1g114280	55.357	168	52	3	332	499	11	155	4.10e-49	166
MS.gene88587.t1	MTR_5g077580	26.270	571	303	13	21	500	24	567	6.66e-47	172
MS.gene88587.t1	MTR_2g013310	28.125	480	304	12	22	489	52	502	1.26e-46	170
MS.gene88587.t1	MTR_2g013310	30.340	412	267	10	90	489	26	429	2.88e-46	167
MS.gene88587.t1	MTR_2g048720	33.036	336	201	5	21	351	24	340	9.52e-46	169
MS.gene88587.t1	MTR_4g077740	29.087	471	291	9	31	484	53	497	1.67e-44	164
MS.gene88587.t1	MTR_2g049020	29.096	354	226	5	21	367	24	359	7.68e-44	163
MS.gene88587.t1	MTR_7g082270	28.471	425	270	7	16	440	62	452	8.55e-44	161
MS.gene88587.t1	MTR_2g026160	30.145	345	207	7	20	351	24	347	2.07e-41	157
MS.gene88587.t1	MTR_0064s0040	50.000	150	61	2	13	162	14	149	3.76e-41	145
MS.gene88587.t1	MTR_7g113970	27.623	467	301	8	21	484	60	492	6.27e-41	154
MS.gene88587.t1	MTR_3g074330	47.500	160	75	2	1	153	1	158	1.33e-40	144
MS.gene88587.t1	MTR_3g074360	47.500	160	75	2	1	153	1	158	1.33e-40	144
MS.gene88587.t1	MTR_1g022315	26.866	469	312	8	23	488	49	489	2.85e-40	152
MS.gene88587.t1	MTR_3g074310	47.500	160	75	2	1	153	1	158	3.19e-40	143
MS.gene88587.t1	MTR_1g022315	27.708	397	277	5	95	488	1	390	2.00e-39	147
MS.gene88587.t1	MTR_8g077300	27.907	473	295	11	22	484	38	474	8.54e-39	147
MS.gene88587.t1	MTR_7g094450	27.623	467	302	9	21	484	37	470	9.51e-39	147
MS.gene88587.t1	MTR_8g077310	25.800	469	318	6	18	484	42	482	2.34e-38	147
MS.gene88587.t1	MTR_7g094110	28.017	464	299	8	23	484	42	472	1.82e-37	144
MS.gene88587.t1	MTR_5g020270	26.539	471	302	9	23	484	50	485	9.78e-37	142
MS.gene88587.t1	MTR_7g113960	27.273	407	272	8	84	484	67	455	1.10e-36	142
MS.gene88587.t1	MTR_4g118610	26.763	482	313	8	13	489	42	488	2.42e-36	141
MS.gene88587.t1	MTR_8g077310	26.786	392	278	4	95	484	1	385	4.61e-36	138
MS.gene88587.t1	MTR_2g020710	25.153	489	324	8	2	484	28	480	5.98e-36	140
MS.gene88587.t1	MTR_2g020710	26.355	406	278	6	85	484	1	391	3.61e-35	136
MS.gene88587.t1	MTR_5g019870	27.356	435	289	9	77	487	48	479	4.98e-35	137
MS.gene88587.t1	MTR_5g020270	27.318	399	267	7	95	484	1	385	2.24e-34	134
MS.gene88587.t1	MTR_4g069500	28.440	327	212	5	204	511	3	326	2.27e-33	129
MS.gene88587.t1	MTR_7g094110	27.253	466	280	10	23	484	42	452	4.33e-31	125
MS.gene88587.t1	MTR_8g077310	28.205	351	222	6	18	366	42	364	5.53e-31	124
MS.gene88587.t1	MTR_3g080240	25.610	410	281	11	89	489	139	533	2.09e-30	124
MS.gene88587.t1	MTR_2g026140	28.696	345	197	9	20	351	24	332	8.10e-30	123
MS.gene88587.t1	MTR_4g064820	27.577	359	229	5	23	364	96	440	2.57e-29	121
MS.gene88587.t1	MTR_5g020270	24.628	471	290	10	23	484	50	464	5.46e-29	119
MS.gene88587.t1	MTR_2g020710	25.476	420	271	8	2	415	28	411	8.87e-29	118
MS.gene88587.t1	MTR_7g113970	28.529	333	207	6	21	351	60	363	1.11e-28	118
MS.gene88587.t1	MTR_4g013205	25.510	392	281	4	94	484	88	469	1.48e-28	119
MS.gene88587.t1	MTR_4g118610	27.073	410	259	8	13	417	42	416	2.17e-28	117
MS.gene88587.t1	MTR_6g087910	25.373	469	308	9	21	484	52	483	5.99e-28	117
MS.gene88587.t1	MTR_2g020710	25.359	418	270	8	2	413	28	409	3.21e-27	114
MS.gene88587.t1	MTR_7g113960	29.603	277	179	5	84	355	67	332	4.09e-27	113
MS.gene88587.t1	MTR_2g020710	25.606	371	238	7	2	366	28	366	7.68e-25	106
MS.gene88587.t1	MTR_3g116060	31.414	191	125	3	75	259	31	221	2.50e-19	92.0
MS.gene88587.t1	MTR_5g024740	26.667	240	153	5	23	259	4	223	1.86e-18	89.4
MS.gene88587.t1	MTR_8g073100	25.078	319	197	9	23	333	4	288	6.86e-18	87.4
MS.gene88587.t1	MTR_5g044910	28.814	177	124	2	85	259	47	223	3.97e-17	85.1
MS.gene88587.t1	MTR_3g118530	30.588	170	116	2	92	259	54	223	6.25e-16	81.3
MS.gene88587.t1	MTR_3g118530	30.994	171	116	2	92	260	54	224	1.25e-15	80.1
MS.gene88587.t1	MTR_4g030040	28.177	181	126	3	88	266	120	298	1.46e-11	67.0
MS.gene88587.t1	MTR_4g030040	28.177	181	126	3	88	266	121	299	1.52e-11	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88587.t1	AT3G19940	71.748	492	137	2	19	509	21	511	0.0	741
MS.gene88587.t1	AT1G50310	69.980	493	145	3	19	509	21	512	0.0	718
MS.gene88587.t1	AT5G23270	67.134	499	161	2	1	496	1	499	0.0	684
MS.gene88587.t1	AT3G19930	65.415	506	170	3	3	505	2	505	0.0	676
MS.gene88587.t1	AT3G19930	65.415	506	170	3	3	505	2	505	0.0	676
MS.gene88587.t1	AT1G11260	61.554	502	189	3	1	499	1	501	0.0	639
MS.gene88587.t1	AT4G21480	63.190	489	178	2	10	497	10	497	0.0	615
MS.gene88587.t1	AT5G26340	57.058	503	212	3	1	500	1	502	0.0	603
MS.gene88587.t1	AT4G02050	54.264	516	227	5	1	511	1	512	0.0	573
MS.gene88587.t1	AT4G02050	54.264	516	227	5	1	511	1	512	0.0	573
MS.gene88587.t1	AT1G77210	53.571	504	226	5	1	499	1	501	0.0	546
MS.gene88587.t1	AT1G77210	53.571	504	226	5	1	499	1	501	0.0	546
MS.gene88587.t1	AT1G50310	70.474	359	104	2	153	509	11	369	0.0	537
MS.gene88587.t1	AT1G34580	51.000	500	238	3	2	496	3	500	0.0	531
MS.gene88587.t1	AT5G26250	53.388	487	221	4	13	497	12	494	0.0	530
MS.gene88587.t1	AT3G05960	51.503	499	233	5	7	500	5	499	0.0	520
MS.gene88587.t1	AT1G07340	53.082	503	227	6	1	499	1	498	4.57e-176	505
MS.gene88587.t1	AT5G61520	51.653	484	227	3	17	495	18	499	1.15e-175	504
MS.gene88587.t1	AT1G34580	51.327	452	213	3	50	496	1	450	3.19e-168	483
MS.gene88587.t1	AT5G61520	51.549	452	212	3	49	495	2	451	3.15e-160	463
MS.gene88587.t1	AT1G77210	54.155	349	156	4	153	499	6	352	1.76e-129	381
MS.gene88587.t1	AT2G16120	29.259	499	304	10	16	490	19	492	1.65e-56	197
MS.gene88587.t1	AT3G18830	28.653	527	306	12	22	509	35	530	3.22e-55	194
MS.gene88587.t1	AT4G36670	30.785	497	288	12	19	488	13	480	5.64e-55	192
MS.gene88587.t1	AT2G18480	30.105	475	281	12	37	487	36	483	7.35e-55	192
MS.gene88587.t1	AT2G16130	28.858	499	306	10	16	490	19	492	1.06e-54	192
MS.gene88587.t1	AT2G20780	28.898	481	303	10	18	488	50	501	1.54e-50	181
MS.gene88587.t1	AT5G16150	29.449	472	300	8	16	484	98	539	1.47e-49	179
MS.gene88587.t1	AT5G16150	29.449	472	300	8	16	484	98	539	1.47e-49	179
MS.gene88587.t1	AT5G16150	29.449	472	300	8	16	484	98	539	1.47e-49	179
MS.gene88587.t1	AT2G43330	28.692	474	312	7	22	490	30	482	4.00e-47	171
MS.gene88587.t1	AT2G20780	30.488	410	267	8	89	488	42	443	5.91e-47	170
MS.gene88587.t1	AT1G30220	30.383	339	211	5	20	351	25	345	1.29e-45	168
MS.gene88587.t1	AT5G59250	27.859	481	303	8	23	484	98	553	2.34e-44	164
MS.gene88587.t1	AT5G17010	27.872	470	298	8	31	484	55	499	3.73e-42	157
MS.gene88587.t1	AT5G17010	27.872	470	298	8	31	484	55	499	3.73e-42	157
MS.gene88587.t1	AT5G17010	27.872	470	298	8	31	484	55	499	3.73e-42	157
MS.gene88587.t1	AT1G08930	27.254	477	300	10	16	484	51	488	4.46e-42	157
MS.gene88587.t1	AT1G08930	27.254	477	300	10	16	484	51	488	4.46e-42	157
MS.gene88587.t1	AT2G35740	29.859	355	221	7	21	365	24	360	2.46e-41	156
MS.gene88587.t1	AT1G75220	27.163	497	309	10	1	488	35	487	2.92e-41	155
MS.gene88587.t1	AT3G05155	25.684	475	316	9	13	485	17	456	5.47e-41	153
MS.gene88587.t1	AT1G08900	28.571	406	270	7	84	484	23	413	1.03e-40	152
MS.gene88587.t1	AT1G54730	26.030	461	302	8	28	484	37	462	1.33e-40	152
MS.gene88587.t1	AT1G08890	28.010	407	273	8	84	485	67	458	1.92e-40	152
MS.gene88587.t1	AT1G08900	28.571	406	270	7	84	484	57	447	2.21e-40	152
MS.gene88587.t1	AT1G08900	28.571	406	270	7	84	484	65	455	2.61e-40	152
MS.gene88587.t1	AT1G08900	28.571	406	270	7	84	484	65	455	2.61e-40	152
MS.gene88587.t1	AT5G18840	26.452	465	306	7	23	484	44	475	2.15e-39	149
MS.gene88587.t1	AT4G16480	28.691	359	222	6	20	365	24	361	2.57e-39	151
MS.gene88587.t1	AT4G16480	28.691	359	222	6	20	365	24	361	2.57e-39	151
MS.gene88587.t1	AT4G16480	28.691	359	222	6	20	365	24	361	2.57e-39	151
MS.gene88587.t1	AT3G03090	27.872	470	298	8	31	484	55	499	2.74e-39	149
MS.gene88587.t1	AT5G27360	26.611	481	302	11	14	484	26	465	5.86e-39	148
MS.gene88587.t1	AT1G19450	26.752	471	309	7	23	488	49	488	1.31e-38	147
MS.gene88587.t1	AT5G27360	26.611	481	302	11	14	484	74	513	1.46e-38	148
MS.gene88587.t1	AT3G05165	26.427	473	309	8	16	484	23	460	1.50e-38	147
MS.gene88587.t1	AT3G05165	26.427	473	309	8	16	484	23	460	1.50e-38	147
MS.gene88587.t1	AT3G05165	26.427	473	309	8	16	484	23	460	1.50e-38	147
MS.gene88587.t1	AT3G05160	27.235	481	295	10	16	484	14	451	1.27e-37	144
MS.gene88587.t1	AT2G48020	27.451	408	276	7	84	486	68	460	3.35e-37	143
MS.gene88587.t1	AT2G48020	27.451	408	276	7	84	486	68	460	3.35e-37	143
MS.gene88587.t1	AT5G27350	25.726	482	307	9	13	484	21	461	4.15e-37	143
MS.gene88587.t1	AT3G05150	27.069	447	296	9	59	497	58	482	8.29e-37	142
MS.gene88587.t1	AT3G05150	27.146	431	287	8	59	484	58	466	1.72e-36	141
MS.gene88587.t1	AT3G05150	27.146	431	287	8	59	484	58	466	1.72e-36	141
MS.gene88587.t1	AT3G05160	28.009	432	269	9	65	484	1	402	7.19e-36	138
MS.gene88587.t1	AT3G05160	28.009	432	269	9	65	484	1	402	7.19e-36	138
MS.gene88587.t1	AT3G05400	25.210	476	317	10	13	484	16	456	2.63e-35	137
MS.gene88587.t1	AT1G08920	25.979	485	296	12	16	484	25	462	3.35e-34	135
MS.gene88587.t1	AT1G54730	25.054	459	288	10	28	484	37	441	6.52e-34	133
MS.gene88587.t1	AT1G08920	26.186	485	302	12	16	484	25	469	6.99e-34	134
MS.gene88587.t1	AT1G54730	25.298	419	274	8	28	442	37	420	2.96e-33	131
MS.gene88587.t1	AT4G04750	25.887	479	315	11	10	484	26	468	4.49e-33	132
MS.gene88587.t1	AT4G04750	25.887	479	315	11	10	484	26	468	4.49e-33	132
MS.gene88587.t1	AT4G04750	25.887	479	315	11	10	484	70	512	7.67e-33	132
MS.gene88587.t1	AT3G05165	25.556	450	296	8	16	461	23	437	1.22e-32	130
MS.gene88587.t1	AT1G08900	27.989	368	245	7	84	446	65	417	1.60e-32	129
MS.gene88587.t1	AT4G04760	25.995	427	291	7	65	486	1	407	2.79e-32	128
MS.gene88587.t1	AT4G04760	25.866	433	296	7	59	486	54	466	4.71e-32	129
MS.gene88587.t1	AT3G05165	26.265	415	267	8	16	426	23	402	6.01e-32	128
MS.gene88587.t1	AT3G05165	26.265	415	267	8	16	426	23	402	6.01e-32	128
MS.gene88587.t1	AT1G54730	26.087	391	250	8	28	414	37	392	1.52e-31	126
MS.gene88587.t1	AT1G54730	26.087	391	250	8	28	414	37	392	1.52e-31	126
MS.gene88587.t1	AT1G79820	25.630	476	304	12	18	484	53	487	5.46e-31	126
MS.gene88587.t1	AT1G79820	25.630	476	304	12	18	484	53	487	5.46e-31	126
MS.gene88587.t1	AT5G27360	26.914	405	245	11	14	408	26	389	5.00e-30	122
MS.gene88587.t1	AT5G27360	26.121	379	254	7	114	484	1	361	6.49e-30	120
MS.gene88587.t1	AT5G27360	26.121	379	254	7	114	484	1	361	6.49e-30	120
MS.gene88587.t1	AT1G08920	25.951	447	268	12	16	446	25	424	1.82e-29	120
MS.gene88587.t1	AT1G05030	24.946	465	305	12	29	484	85	514	2.22e-29	121
MS.gene88587.t1	AT3G05400	26.484	438	286	13	66	484	16	436	4.17e-29	120
MS.gene88587.t1	AT4G04760	25.229	436	292	8	59	486	54	463	4.24e-29	120
MS.gene88587.t1	AT3G05155	25.000	340	223	6	13	351	17	325	5.11e-29	117
MS.gene88587.t1	AT1G54730	26.994	326	207	6	28	351	37	333	1.03e-28	117
MS.gene88587.t1	AT1G67300	24.790	476	304	11	21	484	53	486	2.49e-28	118
MS.gene88587.t1	AT1G67300	24.790	476	304	11	21	484	53	486	2.49e-28	118
MS.gene88587.t1	AT1G05030	25.182	413	287	9	80	484	64	462	2.80e-28	117
MS.gene88587.t1	AT1G67300	24.895	474	307	11	21	484	53	487	9.03e-28	116
MS.gene88587.t1	AT1G67300	24.882	422	264	10	21	431	53	432	5.44e-27	114
MS.gene88587.t1	AT1G67300	24.882	422	264	10	21	431	53	432	5.44e-27	114
MS.gene88587.t1	AT1G67300	25.882	340	210	8	21	351	53	359	9.24e-27	112
MS.gene88587.t1	AT1G67300	25.882	340	210	8	21	351	53	359	9.24e-27	112
MS.gene88587.t1	AT1G54730	24.221	417	260	10	28	442	37	399	9.41e-27	112
MS.gene88587.t1	AT1G79820	25.355	422	266	11	18	431	53	433	3.50e-26	111
MS.gene88587.t1	AT1G54730	26.000	300	194	5	28	325	37	310	1.30e-25	107
MS.gene88587.t1	AT1G54730	26.000	300	194	5	28	325	37	310	1.30e-25	107
MS.gene88587.t1	AT2G48020	29.066	289	190	5	84	370	68	343	1.33e-25	108
MS.gene88587.t1	AT1G54730	24.936	389	236	10	28	414	37	371	5.35e-25	107
MS.gene88587.t1	AT2G48020	29.259	270	181	4	84	351	68	329	5.57e-25	106
MS.gene88587.t1	AT3G51490	28.870	239	149	5	23	259	4	223	6.78e-23	103
MS.gene88587.t1	AT3G51490	28.870	239	149	5	23	259	4	223	7.30e-23	103
MS.gene88587.t1	AT5G17010	25.265	471	249	14	31	484	52	436	9.22e-23	101
MS.gene88587.t1	AT3G20460	20.723	415	291	7	84	484	93	483	7.49e-22	99.0
MS.gene88587.t1	AT3G51490	33.908	174	112	3	89	260	2	174	1.64e-21	98.6
MS.gene88587.t1	AT1G79820	23.739	476	265	10	18	484	53	439	2.12e-21	97.4
MS.gene88587.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.32e-17	86.7
MS.gene88587.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.32e-17	86.7
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.18e-17	85.5
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.18e-17	85.5
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.18e-17	85.5
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.57e-17	85.1
MS.gene88587.t1	AT1G79820	24.225	355	198	7	137	484	87	377	6.18e-16	80.1

Find 100 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGATTTGTAGGTTATTAT+TGG	0.155816	1.4:+23357467	MS.gene88587:intron
CCTCTTTCAATCAAAGAATT+TGG	0.181897	1.4:-23356944	None:intergenic
CTTATTGGTGCAATACTAAA+TGG	0.189051	1.4:+23356514	MS.gene88587:CDS
GGTTATGATCTTGGTATTAC+TGG	0.224651	1.4:+23356262	MS.gene88587:CDS
GCTGCAAATTTGATCAATTA+TGG	0.240258	1.4:+23356824	MS.gene88587:CDS
ATAATTGGTCGTCTACTTCT+AGG	0.240972	1.4:+23356562	MS.gene88587:CDS
CGCAAGGCCTCGATGTTTCT+TGG	0.247718	1.4:+23356478	MS.gene88587:CDS
GTCTTCACAGTAGACAAATT+TGG	0.247973	1.4:+23357283	MS.gene88587:CDS
ATTAGAGGAGCACTTAATAT+TGG	0.292005	1.4:+23356770	MS.gene88587:CDS
TGGAGAGTCTCTTTGGGTCT+TGG	0.294554	1.4:+23356869	MS.gene88587:CDS
AAATGGATGGAGAGTCTCTT+TGG	0.295162	1.4:+23356862	MS.gene88587:CDS
ATGCTTTGTCACTTGAAGTT+TGG	0.299069	1.4:+23357728	MS.gene88587:CDS
TGTGGAAGTCACATTGGTTT+TGG	0.299321	1.4:+23357852	MS.gene88587:CDS
ACTCTATTCATCTCTTCAAT+TGG	0.302293	1.4:-23357830	None:intergenic
AACGTTGAAATGCTAATAAT+TGG	0.313941	1.4:+23356547	MS.gene88587:CDS
CTCACAAATGTTTATTTGTC+AGG	0.326178	1.4:+23357333	MS.gene88587:CDS
CTATCAATGCAGCAAGGTAT+AGG	0.331989	1.4:-23356417	None:intergenic
ATCTTAATTGCATCAAGGTT+TGG	0.334544	1.4:+23357491	MS.gene88587:CDS
CATTTAGTATTGCACCAATA+AGG	0.345996	1.4:-23356513	None:intergenic
TGCATGGTCTTGGGGACCAT+TGG	0.347323	1.4:+23357592	MS.gene88587:CDS
GGTCGTCTACTTCTAGGATT+TGG	0.352688	1.4:+23356568	MS.gene88587:CDS
TTGCGGCATTTGCATGGTCT+TGG	0.355570	1.4:+23357582	MS.gene88587:CDS
TGCGGCATTTGCATGGTCTT+GGG	0.366872	1.4:+23357583	MS.gene88587:CDS
TACCAATTGTAATCATCATT+TGG	0.367727	1.4:-23356796	None:intergenic
CCAAATTCTTTGATTGAAAG+AGG	0.368544	1.4:+23356944	MS.gene88587:CDS
GTGAGTTGAGGCCTATATTC+TGG	0.368775	1.4:-23357100	None:intergenic
CTCATGTCTGCGGTTATTAG+TGG	0.373226	1.4:+23357229	MS.gene88587:CDS
GTTCCTGATCATGTTGTTGA+TGG	0.378159	1.4:+23357884	MS.gene88587:CDS
CAAAGCCTAAGATCTTAAAA+AGG	0.389887	1.4:-23357192	None:intergenic
TAAGAGCACAGCAATGAAAA+TGG	0.393637	1.4:-23357789	None:intergenic
GCATGGTCTTGGGGACCATT+GGG	0.399402	1.4:+23357593	MS.gene88587:CDS
TGATGGTGGTAACAACAAAA+AGG	0.404447	1.4:+23357901	MS.gene88587:CDS
CATTAATGCCGGTAAGTTGT+TGG	0.413496	1.4:-23357147	None:intergenic
TATCAATGCAGCAAGGTATA+GGG	0.416508	1.4:-23356416	None:intergenic
AAACATGTCATTAACACATA+TGG	0.418399	1.4:-23356211	None:intergenic
GAGAAGGTCGGCTTCACCTT+TGG	0.418457	1.4:-23357537	None:intergenic
GGTCTTGGGGACCATTGGGT+TGG	0.420130	1.4:+23357597	MS.gene88587:CDS
CCTAGGCACAAAAGAATTGC+TGG	0.422557	1.4:-23356899	None:intergenic
ACCCGTCTATTTGTCTGAAA+TGG	0.425205	1.4:+23356736	MS.gene88587:CDS
TTGGGGACCATTGGGTTGGT+TGG	0.425742	1.4:+23357601	MS.gene88587:CDS
TGTGATTGTGGAAGCAAAGA+AGG	0.428707	1.4:-23356443	None:intergenic
TCTTGATCAAATTCTTTCCT+CGG	0.432055	1.4:+23356308	MS.gene88587:CDS
ACATTACTCAACCAGAATAT+AGG	0.435284	1.4:+23357089	MS.gene88587:CDS
CTTGATCAAATTCTTTCCTC+GGG	0.441826	1.4:+23356309	MS.gene88587:CDS
TTCCAAATGATGATTACAAT+TGG	0.443048	1.4:+23356794	MS.gene88587:CDS
CTCTATTCATCTCTTCAATT+GGG	0.444968	1.4:-23357829	None:intergenic
AATGGATGGAGAGTCTCTTT+GGG	0.455201	1.4:+23356863	MS.gene88587:CDS
CAGTAGACAAATTTGGAAGA+AGG	0.456163	1.4:+23357290	MS.gene88587:CDS
ACATTTATAGCTTGACCTGC+TGG	0.465665	1.4:-23357656	None:intergenic
GCTCTAGAGGTTCGACCAGC+AGG	0.467079	1.4:+23357641	MS.gene88587:CDS
AAGCAAAGGCAATGTTGAAA+AGG	0.468116	1.4:+23356978	MS.gene88587:CDS
TCAAGTGACAAAGCATGGTT+AGG	0.470864	1.4:-23357721	None:intergenic
CCACCATCAACAACATGATC+AGG	0.475379	1.4:-23357887	None:intergenic
GCATCAAGGTTTGGATTGAC+CGG	0.486421	1.4:+23357500	MS.gene88587:CDS
TACTGGAGGAGTGACTTCTA+TGG	0.491588	1.4:+23356279	MS.gene88587:CDS
TGCTAGTGAAGAAGCTAGTA+AGG	0.497047	1.4:+23357048	MS.gene88587:CDS
TTCCACAATCACAAGAATGA+TGG	0.497068	1.4:+23356453	MS.gene88587:CDS
GGTTGAGTAATGTTCTTCCA+TGG	0.497635	1.4:-23357079	None:intergenic
AGGTTTGGATTGACCGGACA+AGG	0.502495	1.4:+23357506	MS.gene88587:CDS
TTGGAATCTTAATTGCATCA+AGG	0.507931	1.4:+23357486	MS.gene88587:CDS
TTTGGTAAATGATCCTTGTC+CGG	0.509153	1.4:-23357519	None:intergenic
AAGAAGGTTATTATTTCTTG+AGG	0.518335	1.4:+23357306	MS.gene88587:CDS
AAGGCCTCGATGTTTCTTGG+TGG	0.522913	1.4:+23356481	MS.gene88587:CDS
AGAAGGTTATTATTTCTTGA+GGG	0.523975	1.4:+23357307	MS.gene88587:CDS
CTACTTCTAGGATTTGGTGT+GGG	0.532326	1.4:+23356574	MS.gene88587:CDS
CACTAATAACCGCAGACATG+AGG	0.542056	1.4:-23357228	None:intergenic
TCCCATCATTCTTGTGATTG+TGG	0.543740	1.4:-23356455	None:intergenic
CTAGTAAGGTGGAACATCCA+TGG	0.545991	1.4:+23357062	MS.gene88587:CDS
AGCAATGAAAATGGTCATGA+TGG	0.546904	1.4:-23357780	None:intergenic
AAACATGATAACATTAATGC+CGG	0.548089	1.4:-23357158	None:intergenic
CCTGATCATGTTGTTGATGG+TGG	0.563360	1.4:+23357887	MS.gene88587:CDS
CATATGTTGCGGCATTTGCA+TGG	0.566036	1.4:+23357576	MS.gene88587:CDS
GGAGCTTTCGTTGAGACGAG+TGG	0.569051	1.4:+23356160	MS.gene88587:CDS
AGGTTATTATTTCTTGAGGG+TGG	0.575907	1.4:+23357310	MS.gene88587:CDS
CACAAGAATGATGGGACGCA+AGG	0.577104	1.4:+23356462	MS.gene88587:CDS
GCCATTTCAGACAAATAGAC+GGG	0.579473	1.4:-23356737	None:intergenic
CACAAATAAAGAACAAGAGA+AGG	0.579551	1.4:-23357553	None:intergenic
TCCACAATCACAAGAATGAT+GGG	0.581040	1.4:+23356454	MS.gene88587:CDS
GCGGCATTTGCATGGTCTTG+GGG	0.583074	1.4:+23357584	MS.gene88587:CDS
CTTTATTTGTGCATATGTTG+CGG	0.584461	1.4:+23357565	MS.gene88587:CDS
AAACTTCAAGTGACAAAGCA+TGG	0.588507	1.4:-23357726	None:intergenic
ATGTCTGCGGTTATTAGTGG+TGG	0.592724	1.4:+23357232	MS.gene88587:CDS
TATGATCTTGGTATTACTGG+AGG	0.595118	1.4:+23356265	MS.gene88587:CDS
ACTAATAACCGCAGACATGA+GGG	0.599477	1.4:-23357227	None:intergenic
TCTACTTCTAGGATTTGGTG+TGG	0.607831	1.4:+23356573	MS.gene88587:CDS
AGCCATTTCAGACAAATAGA+CGG	0.609525	1.4:-23356738	None:intergenic
TTGAAGAGATGAATAGAGTG+TGG	0.617789	1.4:+23357834	MS.gene88587:CDS
TAGTGAAATATGCGCTCTAG+AGG	0.623910	1.4:+23357628	MS.gene88587:CDS
TCTAGAGCGCATATTTCACT+AGG	0.626001	1.4:-23357626	None:intergenic
AATAAAGAACAAGAGAAGGT+CGG	0.627160	1.4:-23357549	None:intergenic
AGGTCAAGCTATAAATGTTG+CGG	0.633836	1.4:+23357661	MS.gene88587:CDS
ATAGAGTGTGGAAGTCACAT+TGG	0.642749	1.4:+23357846	MS.gene88587:CDS
CTAGGCACCAACCAACCCAA+TGG	0.653417	1.4:-23357608	None:intergenic
TGATGCTTCCCTCATGTCTG+CGG	0.661280	1.4:+23357219	MS.gene88587:CDS
AAACTGACGAAAGTGAGTTG+AGG	0.669570	1.4:-23357112	None:intergenic
AGGAAGCTATCAATGCAGCA+AGG	0.676637	1.4:-23356423	None:intergenic
GGACAAGGATCATTTACCAA+AGG	0.690139	1.4:+23357521	MS.gene88587:CDS
TAGTGAAGAAGCTAGTAAGG+TGG	0.692736	1.4:+23357051	MS.gene88587:CDS
GCAATGTTGAAAAGGATCCG+CGG	0.695814	1.4:+23356986	MS.gene88587:CDS
TAAGCCACCAAGAAACATCG+AGG	0.754385	1.4:-23356485	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAATTAATCTATGATTTGT+AGG	+	chr1.4:23357457-23357476	MS.gene88587:intron	15.0%
!!	AGTGGAATAAAAAATTATGA+GGG	+	chr1.4:23356178-23356197	MS.gene88587:CDS	20.0%
!!!	ATATTCTTCATCAACATTTT+CGG	-	chr1.4:23357014-23357033	None:intergenic	20.0%
!!!	TATGATTTGTAGGTTATTAT+TGG	+	chr1.4:23357467-23357486	MS.gene88587:intron	20.0%
!	AAACATGATAACATTAATGC+CGG	-	chr1.4:23357161-23357180	None:intergenic	25.0%
!	AAACATGTCATTAACACATA+TGG	-	chr1.4:23356214-23356233	None:intergenic	25.0%
!	AACGTTGAAATGCTAATAAT+TGG	+	chr1.4:23356547-23356566	MS.gene88587:CDS	25.0%
!	GAGTGGAATAAAAAATTATG+AGG	+	chr1.4:23356177-23356196	MS.gene88587:CDS	25.0%
!	TACCAATTGTAATCATCATT+TGG	-	chr1.4:23356799-23356818	None:intergenic	25.0%
!	TTATCTATTGTCTAAACAGT+CGG	+	chr1.4:23356712-23356731	MS.gene88587:intron	25.0%
!	TTCCAAATGATGATTACAAT+TGG	+	chr1.4:23356794-23356813	MS.gene88587:CDS	25.0%
!!	AAGAAGGTTATTATTTCTTG+AGG	+	chr1.4:23357306-23357325	MS.gene88587:CDS	25.0%
!!	AGAAGGTTATTATTTCTTGA+GGG	+	chr1.4:23357307-23357326	MS.gene88587:CDS	25.0%
	AATAAAGAACAAGAGAAGGT+CGG	-	chr1.4:23357552-23357571	None:intergenic	30.0%
	ACATTACTCAACCAGAATAT+AGG	+	chr1.4:23357089-23357108	MS.gene88587:CDS	30.0%
	ACTCTATTCATCTCTTCAAT+TGG	-	chr1.4:23357833-23357852	None:intergenic	30.0%
	ATCTTAATTGCATCAAGGTT+TGG	+	chr1.4:23357491-23357510	MS.gene88587:CDS	30.0%
	CAAAGCCTAAGATCTTAAAA+AGG	-	chr1.4:23357195-23357214	None:intergenic	30.0%
	CACAAATAAAGAACAAGAGA+AGG	-	chr1.4:23357556-23357575	None:intergenic	30.0%
	CATTTAGTATTGCACCAATA+AGG	-	chr1.4:23356516-23356535	None:intergenic	30.0%
	CCAAATTCTTTGATTGAAAG+AGG	+	chr1.4:23356944-23356963	MS.gene88587:CDS	30.0%
	CCTCTTTCAATCAAAGAATT+TGG	-	chr1.4:23356947-23356966	None:intergenic	30.0%
	CTCACAAATGTTTATTTGTC+AGG	+	chr1.4:23357333-23357352	MS.gene88587:CDS	30.0%
	CTCTATTCATCTCTTCAATT+GGG	-	chr1.4:23357832-23357851	None:intergenic	30.0%
	CTTATTGGTGCAATACTAAA+TGG	+	chr1.4:23356514-23356533	MS.gene88587:CDS	30.0%
	GCTGCAAATTTGATCAATTA+TGG	+	chr1.4:23356824-23356843	MS.gene88587:CDS	30.0%
	TCTTGATCAAATTCTTTCCT+CGG	+	chr1.4:23356308-23356327	MS.gene88587:CDS	30.0%
	TGGTGTTTCACCTAAAAAAA+GGG	-	chr1.4:23356927-23356946	None:intergenic	30.0%
	TTGGAATCTTAATTGCATCA+AGG	+	chr1.4:23357486-23357505	MS.gene88587:CDS	30.0%
!	CTTTATTTGTGCATATGTTG+CGG	+	chr1.4:23357565-23357584	MS.gene88587:CDS	30.0%
!	TTGGTGTTTCACCTAAAAAA+AGG	-	chr1.4:23356928-23356947	None:intergenic	30.0%
!!	ATTAGAGGAGCACTTAATAT+TGG	+	chr1.4:23356770-23356789	MS.gene88587:CDS	30.0%
!!!	CTTCTTTTTGGTTATGATCT+TGG	+	chr1.4:23356253-23356272	MS.gene88587:CDS	30.0%
!!!	CTTTTTAAGATCTTAGGCTT+TGG	+	chr1.4:23357193-23357212	MS.gene88587:CDS	30.0%
	AAACTTCAAGTGACAAAGCA+TGG	-	chr1.4:23357729-23357748	None:intergenic	35.0%
	AAGCAAAGGCAATGTTGAAA+AGG	+	chr1.4:23356978-23356997	MS.gene88587:CDS	35.0%
	AGCAATGAAAATGGTCATGA+TGG	-	chr1.4:23357783-23357802	None:intergenic	35.0%
	AGCCATTTCAGACAAATAGA+CGG	-	chr1.4:23356741-23356760	None:intergenic	35.0%
	AGGTCAAGCTATAAATGTTG+CGG	+	chr1.4:23357661-23357680	MS.gene88587:CDS	35.0%
	ATAATTGGTCGTCTACTTCT+AGG	+	chr1.4:23356562-23356581	MS.gene88587:CDS	35.0%
	CAGTAGACAAATTTGGAAGA+AGG	+	chr1.4:23357290-23357309	MS.gene88587:CDS	35.0%
	CCTAAGATCTTAAAAAGGAC+GGG	-	chr1.4:23357190-23357209	None:intergenic	35.0%
	CTTGATCAAATTCTTTCCTC+GGG	+	chr1.4:23356309-23356328	MS.gene88587:CDS	35.0%
	GCCTAAGATCTTAAAAAGGA+CGG	-	chr1.4:23357191-23357210	None:intergenic	35.0%
	GGTTATGATCTTGGTATTAC+TGG	+	chr1.4:23356262-23356281	MS.gene88587:CDS	35.0%
	GTCTTCACAGTAGACAAATT+TGG	+	chr1.4:23357283-23357302	MS.gene88587:CDS	35.0%
	TATCAATGCAGCAAGGTATA+GGG	-	chr1.4:23356419-23356438	None:intergenic	35.0%
	TATGATCTTGGTATTACTGG+AGG	+	chr1.4:23356265-23356284	MS.gene88587:CDS	35.0%
	TCCACAATCACAAGAATGAT+GGG	+	chr1.4:23356454-23356473	MS.gene88587:CDS	35.0%
	TTCCACAATCACAAGAATGA+TGG	+	chr1.4:23356453-23356472	MS.gene88587:CDS	35.0%
	TTGAAGAGATGAATAGAGTG+TGG	+	chr1.4:23357834-23357853	MS.gene88587:CDS	35.0%
	TTTGGTAAATGATCCTTGTC+CGG	-	chr1.4:23357522-23357541	None:intergenic	35.0%
!	AGGTTATTATTTCTTGAGGG+TGG	+	chr1.4:23357310-23357329	MS.gene88587:CDS	35.0%
!	ATGCTTTGTCACTTGAAGTT+TGG	+	chr1.4:23357728-23357747	MS.gene88587:CDS	35.0%
!	GGACTTTTCTTTTTCTTTGC+TGG	+	chr1.4:23357749-23357768	MS.gene88587:CDS	35.0%
!	TAAGAGCACAGCAATGAAAA+TGG	-	chr1.4:23357792-23357811	None:intergenic	35.0%
!	TTCATTCTTTTATACACCCG+AGG	-	chr1.4:23356328-23356347	None:intergenic	35.0%
!!	CCATTTTTCCAACAACTTAC+CGG	+	chr1.4:23357139-23357158	MS.gene88587:CDS	35.0%
!!	GGTGGCTTATTTTTCCTTAT+TGG	+	chr1.4:23356499-23356518	MS.gene88587:CDS	35.0%
!!	TGATGGTGGTAACAACAAAA+AGG	+	chr1.4:23357901-23357920	MS.gene88587:CDS	35.0%
!!!	ACATTGCCTTTGCTTTTTCA+TGG	-	chr1.4:23356973-23356992	None:intergenic	35.0%
!!!	CTTTTTCTTTGCTGGTTTTG+TGG	+	chr1.4:23357757-23357776	MS.gene88587:CDS	35.0%
	AAACTGACGAAAGTGAGTTG+AGG	-	chr1.4:23357115-23357134	None:intergenic	40.0%
	AAATGGATGGAGAGTCTCTT+TGG	+	chr1.4:23356862-23356881	MS.gene88587:CDS	40.0%
	AATGGATGGAGAGTCTCTTT+GGG	+	chr1.4:23356863-23356882	MS.gene88587:CDS	40.0%
	ACAAACGAGGACACACATAT+AGG	-	chr1.4:23357414-23357433	None:intergenic	40.0%
	ACATTTATAGCTTGACCTGC+TGG	-	chr1.4:23357659-23357678	None:intergenic	40.0%
	ACCCGTCTATTTGTCTGAAA+TGG	+	chr1.4:23356736-23356755	MS.gene88587:CDS	40.0%
	ACTAATAACCGCAGACATGA+GGG	-	chr1.4:23357230-23357249	None:intergenic	40.0%
	AGGCAACCATGAAAAAGCAA+AGG	+	chr1.4:23356964-23356983	MS.gene88587:CDS	40.0%
	ATAGAGTGTGGAAGTCACAT+TGG	+	chr1.4:23357846-23357865	MS.gene88587:CDS	40.0%
	ATGGCTCCTGCAAAAATTAG+AGG	+	chr1.4:23356755-23356774	MS.gene88587:CDS	40.0%
	CACCTAAAAAAAGGGATCCT+AGG	-	chr1.4:23356919-23356938	None:intergenic	40.0%
	CATTAATGCCGGTAAGTTGT+TGG	-	chr1.4:23357150-23357169	None:intergenic	40.0%
	CCGGTAAGTTGTTGGAAAAA+TGG	-	chr1.4:23357142-23357161	None:intergenic	40.0%
	CTATCAATGCAGCAAGGTAT+AGG	-	chr1.4:23356420-23356439	None:intergenic	40.0%
	CTTCCAAGCACAAAAATGGA+TGG	+	chr1.4:23356849-23356868	MS.gene88587:CDS	40.0%
	GCCATTTCAGACAAATAGAC+GGG	-	chr1.4:23356740-23356759	None:intergenic	40.0%
	GGACAAGGATCATTTACCAA+AGG	+	chr1.4:23357521-23357540	MS.gene88587:CDS	40.0%
	GGTACTTCCAAGCACAAAAA+TGG	+	chr1.4:23356845-23356864	MS.gene88587:CDS	40.0%
	GGTTGAGTAATGTTCTTCCA+TGG	-	chr1.4:23357082-23357101	None:intergenic	40.0%
	GTTCCTGATCATGTTGTTGA+TGG	+	chr1.4:23357884-23357903	MS.gene88587:CDS	40.0%
	TAGTGAAATATGCGCTCTAG+AGG	+	chr1.4:23357628-23357647	MS.gene88587:CDS	40.0%
	TAGTGAAGAAGCTAGTAAGG+TGG	+	chr1.4:23357051-23357070	MS.gene88587:CDS	40.0%
	TATGTGTGTCCTCGTTTGTA+TGG	+	chr1.4:23357415-23357434	MS.gene88587:intron	40.0%
	TCAAGTGACAAAGCATGGTT+AGG	-	chr1.4:23357724-23357743	None:intergenic	40.0%
	TCCCATCATTCTTGTGATTG+TGG	-	chr1.4:23356458-23356477	None:intergenic	40.0%
	TGAACAGTTCCATACAAACG+AGG	-	chr1.4:23357427-23357446	None:intergenic	40.0%
	TGCTAGTGAAGAAGCTAGTA+AGG	+	chr1.4:23357048-23357067	MS.gene88587:CDS	40.0%
	TGTGATTGTGGAAGCAAAGA+AGG	-	chr1.4:23356446-23356465	None:intergenic	40.0%
!	ACATGTTTTGTAGCTGCCAT+GGG	+	chr1.4:23356226-23356245	MS.gene88587:CDS	40.0%
!	AGTGCTCCTCTAATTTTTGC+AGG	-	chr1.4:23356764-23356783	None:intergenic	40.0%
!	CTCTTCAATTGGGACGTTTT+TGG	-	chr1.4:23357822-23357841	None:intergenic	40.0%
!	TCTAGAGCGCATATTTCACT+AGG	-	chr1.4:23357629-23357648	None:intergenic	40.0%
!!	CTACTTCTAGGATTTGGTGT+GGG	+	chr1.4:23356574-23356593	MS.gene88587:CDS	40.0%
!!	TCTACTTCTAGGATTTGGTG+TGG	+	chr1.4:23356573-23356592	MS.gene88587:CDS	40.0%
!!	TCTCCATCCATTTTTGTGCT+TGG	-	chr1.4:23356855-23356874	None:intergenic	40.0%
!!!	AATTGGGACGTTTTTGGTCT+CGG	-	chr1.4:23357816-23357835	None:intergenic	40.0%
!!!	CCCGTCCTTTTTAAGATCTT+AGG	+	chr1.4:23357187-23357206	MS.gene88587:CDS	40.0%
!!!	TGCCTAGGATCCCTTTTTTT+AGG	+	chr1.4:23356914-23356933	MS.gene88587:CDS	40.0%
!!!	TGTGGAAGTCACATTGGTTT+TGG	+	chr1.4:23357852-23357871	MS.gene88587:CDS	40.0%
	ACCAAAAAGAAGACCTCCCA+TGG	-	chr1.4:23356245-23356264	None:intergenic	45.0%
	AGGAAGCTATCAATGCAGCA+AGG	-	chr1.4:23356426-23356445	None:intergenic	45.0%
	ATGTCTGCGGTTATTAGTGG+TGG	+	chr1.4:23357232-23357251	MS.gene88587:CDS	45.0%
	CACTAATAACCGCAGACATG+AGG	-	chr1.4:23357231-23357250	None:intergenic	45.0%
	CATATGTTGCGGCATTTGCA+TGG	+	chr1.4:23357576-23357595	MS.gene88587:CDS	45.0%
	CCACCATCAACAACATGATC+AGG	-	chr1.4:23357890-23357909	None:intergenic	45.0%
	CCTAGGCACAAAAGAATTGC+TGG	-	chr1.4:23356902-23356921	None:intergenic	45.0%
	CTAGTAAGGTGGAACATCCA+TGG	+	chr1.4:23357062-23357081	MS.gene88587:CDS	45.0%
	CTCATGTCTGCGGTTATTAG+TGG	+	chr1.4:23357229-23357248	MS.gene88587:CDS	45.0%
	GCAATGTTGAAAAGGATCCG+CGG	+	chr1.4:23356986-23357005	MS.gene88587:CDS	45.0%
	GCATCAAGGTTTGGATTGAC+CGG	+	chr1.4:23357500-23357519	MS.gene88587:CDS	45.0%
	TAAGCCACCAAGAAACATCG+AGG	-	chr1.4:23356488-23356507	None:intergenic	45.0%
	TACTGGAGGAGTGACTTCTA+TGG	+	chr1.4:23356279-23356298	MS.gene88587:CDS	45.0%
!	CATCAACATTTTCGGTTCCG+CGG	-	chr1.4:23357006-23357025	None:intergenic	45.0%
!	CCAGCAATTCTTTTGTGCCT+AGG	+	chr1.4:23356899-23356918	MS.gene88587:CDS	45.0%
!	CCTGATCATGTTGTTGATGG+TGG	+	chr1.4:23357887-23357906	MS.gene88587:CDS	45.0%
!	GACATGTTTTGTAGCTGCCA+TGG	+	chr1.4:23356225-23356244	MS.gene88587:CDS	45.0%
!	GTGAGTTGAGGCCTATATTC+TGG	-	chr1.4:23357103-23357122	None:intergenic	45.0%
!	TGGTGTGGGATTTTGCAATC+AGG	+	chr1.4:23356588-23356607	MS.gene88587:CDS	45.0%
!!	GGTCGTCTACTTCTAGGATT+TGG	+	chr1.4:23356568-23356587	MS.gene88587:CDS	45.0%
!!!	ATTGGGACGTTTTTGGTCTC+GGG	-	chr1.4:23357815-23357834	None:intergenic	45.0%
	AAGGCCTCGATGTTTCTTGG+TGG	+	chr1.4:23356481-23356500	MS.gene88587:CDS	50.0%
	AGGTTTGGATTGACCGGACA+AGG	+	chr1.4:23357506-23357525	MS.gene88587:CDS	50.0%
	TGATGCTTCCCTCATGTCTG+CGG	+	chr1.4:23357219-23357238	MS.gene88587:CDS	50.0%
	TGCGGCATTTGCATGGTCTT+GGG	+	chr1.4:23357583-23357602	MS.gene88587:CDS	50.0%
	TGGAGAGTCTCTTTGGGTCT+TGG	+	chr1.4:23356869-23356888	MS.gene88587:CDS	50.0%
	TTGCGGCATTTGCATGGTCT+TGG	+	chr1.4:23357582-23357601	MS.gene88587:CDS	50.0%
!	CACAAGAATGATGGGACGCA+AGG	+	chr1.4:23356462-23356481	MS.gene88587:CDS	50.0%
!	GCCATGGGAGGTCTTCTTTT+TGG	+	chr1.4:23356241-23356260	MS.gene88587:CDS	50.0%
!	TGTTTTGTAGCTGCCATGGG+AGG	+	chr1.4:23356229-23356248	MS.gene88587:CDS	50.0%
	CGCAAGGCCTCGATGTTTCT+TGG	+	chr1.4:23356478-23356497	MS.gene88587:CDS	55.0%
	CTAGGCACCAACCAACCCAA+TGG	-	chr1.4:23357611-23357630	None:intergenic	55.0%
	GGAGCTTTCGTTGAGACGAG+TGG	+	chr1.4:23356160-23356179	MS.gene88587:CDS	55.0%
!	GAGAAGGTCGGCTTCACCTT+TGG	-	chr1.4:23357540-23357559	None:intergenic	55.0%
!	GCATGGTCTTGGGGACCATT+GGG	+	chr1.4:23357593-23357612	MS.gene88587:CDS	55.0%
!	GCGGCATTTGCATGGTCTTG+GGG	+	chr1.4:23357584-23357603	MS.gene88587:CDS	55.0%
!	TGCATGGTCTTGGGGACCAT+TGG	+	chr1.4:23357592-23357611	MS.gene88587:CDS	55.0%
!!	TTGGGGACCATTGGGTTGGT+TGG	+	chr1.4:23357601-23357620	MS.gene88587:CDS	55.0%
	GGTCTTGGGGACCATTGGGT+TGG	+	chr1.4:23357597-23357616	MS.gene88587:CDS	60.0%
!!	GCTCTAGAGGTTCGACCAGC+AGG	+	chr1.4:23357641-23357660	MS.gene88587:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	23356151	23357934	23356151	ID=MS.gene88587
chr1.4	mRNA	23356151	23357934	23356151	ID=MS.gene88587.t1;Parent=MS.gene88587
chr1.4	exon	23356151	23356609	23356151	ID=MS.gene88587.t1.exon1;Parent=MS.gene88587.t1
chr1.4	CDS	23356151	23356609	23356151	ID=cds.MS.gene88587.t1;Parent=MS.gene88587.t1
chr1.4	exon	23356731	23357354	23356731	ID=MS.gene88587.t1.exon2;Parent=MS.gene88587.t1
chr1.4	CDS	23356731	23357354	23356731	ID=cds.MS.gene88587.t1;Parent=MS.gene88587.t1
chr1.4	exon	23357479	23357934	23357479	ID=MS.gene88587.t1.exon3;Parent=MS.gene88587.t1
chr1.4	CDS	23357479	23357934	23357479	ID=cds.MS.gene88587.t1;Parent=MS.gene88587.t1

Gene Sequence

>MS.gene88587

ATGGGAGCTGGAGCTTTCGTTGAGACGAGTGGAATAAAAAATTATGAGGGAAGAGTGACTCCATATGTGTTAATGACATGTTTTGTAGCTGCCATGGGAGGTCTTCTTTTTGGTTATGATCTTGGTATTACTGGAGGAGTGACTTCTATGGATGAATTCTTGATCAAATTCTTTCCTCGGGTGTATAAAAGAATGAAAGATGAAACACATAATACAAGTCAATATTGTAAATTTGATGATCAAATTTTAACACTATTCACATCTTCCCTATACCTTGCTGCATTGATAGCTTCCTTCTTTGCTTCCACAATCACAAGAATGATGGGACGCAAGGCCTCGATGTTTCTTGGTGGCTTATTTTTCCTTATTGGTGCAATACTAAATGGATTAGCAGCTAACGTTGAAATGCTAATAATTGGTCGTCTACTTCTAGGATTTGGTGTGGGATTTTGCAATCAGGTAAGAATCATCTCTAATTTTTTATAAGTTGTATATATTTAATAAAATTACTTAATATTGTGAAAAACAAAATAATATATAATTAACTAATTTTTGTCTTTGTTATCTATTGTCTAAACAGTCGGTACCCGTCTATTTGTCTGAAATGGCTCCTGCAAAAATTAGAGGAGCACTTAATATTGGCTTCCAAATGATGATTACAATTGGTATTCTAGCTGCAAATTTGATCAATTATGGTACTTCCAAGCACAAAAATGGATGGAGAGTCTCTTTGGGTCTTGGAGCAGTGCCAGCAATTCTTTTGTGCCTAGGATCCCTTTTTTTAGGTGAAACACCAAATTCTTTGATTGAAAGAGGCAACCATGAAAAAGCAAAGGCAATGTTGAAAAGGATCCGCGGAACCGAAAATGTTGATGAAGAATATCAAGATCTTGTTGATGCTAGTGAAGAAGCTAGTAAGGTGGAACATCCATGGAAGAACATTACTCAACCAGAATATAGGCCTCAACTCACTTTCGTCAGTTTCATTCCATTTTTCCAACAACTTACCGGCATTAATGTTATCATGTTTTACGCTCCCGTCCTTTTTAAGATCTTAGGCTTTGGTGATGATGCTTCCCTCATGTCTGCGGTTATTAGTGGTGGCGTCAATGTTGTTGCTACACTTGTTTCTGTCTTCACAGTAGACAAATTTGGAAGAAGGTTATTATTTCTTGAGGGTGGCTCACAAATGTTTATTTGTCAGGTAAAAATTGACACATTTATTTCTTTTAGATTTTCATACATAACGCTCAAGTTAAACCTATATGTGTGTCCTCGTTTGTATGGAACTGTTCATGTACAGACTATAATTAATCTATGATTTGTAGGTTATTATTGGAATCTTAATTGCATCAAGGTTTGGATTGACCGGACAAGGATCATTTACCAAAGGTGAAGCCGACCTTCTCTTGTTCTTTATTTGTGCATATGTTGCGGCATTTGCATGGTCTTGGGGACCATTGGGTTGGTTGGTGCCTAGTGAAATATGCGCTCTAGAGGTTCGACCAGCAGGTCAAGCTATAAATGTTGCGGTGAACATGTTCTTCACATTTATGATTGCTCAAGTCTTCCTAACCATGCTTTGTCACTTGAAGTTTGGACTTTTCTTTTTCTTTGCTGGTTTTGTGGCCATCATGACCATTTTCATTGCTGTGCTCTTACCCGAGACCAAAAACGTCCCAATTGAAGAGATGAATAGAGTGTGGAAGTCACATTGGTTTTGGACAAAGTATGTTCCTGATCATGTTGTTGATGGTGGTAACAACAAAAAGGTTGATCCTTGA

Protein sequence

>MS.gene88587.t1

MGAGAFVETSGIKNYEGRVTPYVLMTCFVAAMGGLLFGYDLGITGGVTSMDEFLIKFFPRVYKRMKDETHNTSQYCKFDDQILTLFTSSLYLAALIASFFASTITRMMGRKASMFLGGLFFLIGAILNGLAANVEMLIIGRLLLGFGVGFCNQSVPVYLSEMAPAKIRGALNIGFQMMITIGILAANLINYGTSKHKNGWRVSLGLGAVPAILLCLGSLFLGETPNSLIERGNHEKAKAMLKRIRGTENVDEEYQDLVDASEEASKVEHPWKNITQPEYRPQLTFVSFIPFFQQLTGINVIMFYAPVLFKILGFGDDASLMSAVISGGVNVVATLVSVFTVDKFGRRLLFLEGGSQMFICQVIIGILIASRFGLTGQGSFTKGEADLLLFFICAYVAAFAWSWGPLGWLVPSEICALEVRPAGQAINVAVNMFFTFMIAQVFLTMLCHLKFGLFFFFAGFVAIMTIFIAVLLPETKNVPIEEMNRVWKSHWFWTKYVPDHVVDGGNNKKVDP