AlfalfaGEDB | MS.gene29239

M. sativa cultivar XinJiangDaYe / MS.gene29239

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29239.t1	XP_003589734.2	97.1	512	15	0	1	512	1	512	1.90E-285	991.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29239.t1	Q9LT15	70.8	510	145	3	1	507	1	509	2.8e-208	726.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29239.t1	G7IBF1	97.1	512	15	0	1	512	1	512	1.4e-285	991.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene78327	MS.gene29239	PPI
MS.gene55173	MS.gene29239	PPI
MS.gene29239	MS.gene23356	PPI
MS.gene29239	MS.gene45698	PPI
MS.gene052538	MS.gene29239	PPI
MS.gene28665	MS.gene29239	PPI
MS.gene66840	MS.gene29239	PPI
MS.gene52719	MS.gene29239	PPI
MS.gene57711	MS.gene29239	PPI
MS.gene066532	MS.gene29239	PPI
MS.gene50065	MS.gene29239	PPI
MS.gene055946	MS.gene29239	PPI
MS.gene026190	MS.gene29239	PPI
MS.gene27999	MS.gene29239	PPI
MS.gene056687	MS.gene29239	PPI
MS.gene88585	MS.gene29239	PPI
MS.gene29239	MS.gene78328	PPI
MS.gene29239	MS.gene24272	PPI
MS.gene004491	MS.gene29239	PPI
MS.gene04674	MS.gene29239	PPI
MS.gene003775	MS.gene29239	PPI
MS.gene84416	MS.gene29239	PPI
MS.gene060358	MS.gene29239	PPI
MS.gene064881	MS.gene29239	PPI
MS.gene072436	MS.gene29239	PPI
MS.gene88586	MS.gene29239	PPI
MS.gene021157	MS.gene29239	PPI
MS.gene069970	MS.gene29239	PPI
MS.gene014297	MS.gene29239	PPI
MS.gene91108	MS.gene29239	PPI
MS.gene00961	MS.gene29239	PPI
MS.gene29239	MS.gene003641	PPI
MS.gene065799	MS.gene29239	PPI
MS.gene87411	MS.gene29239	PPI
MS.gene29239	MS.gene073258	PPI
MS.gene32215	MS.gene29239	PPI
MS.gene29239	MS.gene031757	PPI
MS.gene026189	MS.gene29239	PPI
MS.gene76380	MS.gene29239	PPI
MS.gene29303	MS.gene29239	PPI
MS.gene006546	MS.gene29239	PPI
MS.gene56211	MS.gene29239	PPI
MS.gene29239	MS.gene04695	PPI
MS.gene47969	MS.gene29239	PPI
MS.gene006547	MS.gene29239	PPI
MS.gene068492	MS.gene29239	PPI
MS.gene041419	MS.gene29239	PPI
MS.gene026188	MS.gene29239	PPI
MS.gene55171	MS.gene29239	PPI
MS.gene011944	MS.gene29239	PPI
MS.gene066531	MS.gene29239	PPI
MS.gene018043	MS.gene29239	PPI
MS.gene29636	MS.gene29239	PPI
MS.gene29239	MS.gene28482	PPI
MS.gene29239	MS.gene91107	PPI
MS.gene036548	MS.gene29239	PPI
MS.gene017222	MS.gene29239	PPI
MS.gene29239	MS.gene41130	PPI
MS.gene065882	MS.gene29239	PPI
MS.gene91109	MS.gene29239	PPI
MS.gene29239	MS.gene42511	PPI
MS.gene004000	MS.gene29239	PPI
MS.gene25807	MS.gene29239	PPI
MS.gene018060	MS.gene29239	PPI
MS.gene068273	MS.gene29239	PPI
MS.gene29239	MS.gene072437	PPI
MS.gene63888	MS.gene29239	PPI
MS.gene002806	MS.gene29239	PPI
MS.gene017905	MS.gene29239	PPI
MS.gene42509	MS.gene29239	PPI
MS.gene058372	MS.gene29239	PPI
MS.gene29239	MS.gene91108	PPI
MS.gene29239	MS.gene026188	PPI
MS.gene29239	MS.gene55171	PPI
MS.gene29239	MS.gene90685	PPI
MS.gene29304	MS.gene29239	PPI
MS.gene78842	MS.gene29239	PPI
MS.gene26968	MS.gene29239	PPI
MS.gene78329	MS.gene29239	PPI
MS.gene29239	MS.gene04694	PPI
MS.gene29239	MS.gene066530	PPI
MS.gene29240	MS.gene29239	PPI
MS.gene30558	MS.gene29239	PPI
MS.gene72918	MS.gene29239	PPI
MS.gene29239	MS.gene80690	PPI
MS.gene80819	MS.gene29239	PPI
MS.gene041500	MS.gene29239	PPI
MS.gene29239	MS.gene57358	PPI
MS.gene014127	MS.gene29239	PPI
MS.gene044198	MS.gene29239	PPI
MS.gene70727	MS.gene29239	PPI
MS.gene29241	MS.gene29239	PPI
MS.gene062929	MS.gene29239	PPI
MS.gene50704	MS.gene29239	PPI
MS.gene27308	MS.gene29239	PPI
MS.gene48055	MS.gene29239	PPI
MS.gene29239	MS.gene32188	PPI
MS.gene52737	MS.gene29239	PPI
MS.gene049813	MS.gene29239	PPI
MS.gene24951	MS.gene29239	PPI
MS.gene98665	MS.gene29239	PPI
MS.gene29239	MS.gene33740	PPI
MS.gene29239	MS.gene009409	PPI
MS.gene28482	MS.gene29239	PPI
MS.gene26272	MS.gene29239	PPI
MS.gene88587	MS.gene29239	PPI
MS.gene81380	MS.gene29239	PPI
MS.gene56212	MS.gene29239	PPI
MS.gene33406	MS.gene29239	PPI
MS.gene030874	MS.gene29239	PPI
MS.gene036638	MS.gene29239	PPI
MS.gene020721	MS.gene29239	PPI
MS.gene58760	MS.gene29239	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29239.t1	MTR_1g038630	97.070	512	15	0	1	512	1	512	0.0	1021
MS.gene29239.t1	MTR_1g038600	93.945	512	13	1	1	512	1	494	0.0	976
MS.gene29239.t1	MTR_5g082540	78.304	507	110	0	1	507	1	507	0.0	815
MS.gene29239.t1	MTR_4g091370	64.503	493	169	4	13	500	13	504	0.0	614
MS.gene29239.t1	MTR_3g008160	58.740	492	197	4	13	501	13	501	0.0	604
MS.gene29239.t1	MTR_0009s0370	58.800	500	201	3	1	497	1	498	0.0	599
MS.gene29239.t1	MTR_5g041550	61.723	499	187	3	3	497	2	500	0.0	597
MS.gene29239.t1	MTR_3g093010	59.020	510	203	3	3	506	2	511	0.0	594
MS.gene29239.t1	MTR_5g006070	55.888	501	211	4	14	511	13	506	0.0	587
MS.gene29239.t1	MTR_4g090600	62.069	493	182	4	11	500	11	501	0.0	587
MS.gene29239.t1	MTR_0204s0020	55.967	486	209	3	14	498	12	493	0.0	580
MS.gene29239.t1	MTR_0204s0020	55.556	486	208	4	14	498	12	490	0.0	570
MS.gene29239.t1	MTR_3g023480	57.755	490	204	2	14	500	12	501	0.0	568
MS.gene29239.t1	MTR_5g094760	54.059	505	223	4	1	500	1	501	0.0	568
MS.gene29239.t1	MTR_1g104770	55.400	500	219	3	1	497	1	499	0.0	566
MS.gene29239.t1	MTR_1g104750	54.000	500	225	4	1	497	1	498	0.0	563
MS.gene29239.t1	MTR_7g091690	55.375	493	215	4	7	498	11	499	0.0	562
MS.gene29239.t1	MTR_3g008170	55.469	512	221	5	1	508	1	509	0.0	558
MS.gene29239.t1	MTR_3g008160	58.681	455	182	4	50	501	1	452	0.0	552
MS.gene29239.t1	MTR_6g087040	53.267	505	228	5	1	500	1	502	0.0	545
MS.gene29239.t1	MTR_6g088375	53.267	505	228	5	1	500	1	502	0.0	545
MS.gene29239.t1	MTR_4g116790	51.102	499	239	4	2	499	6	500	0.0	542
MS.gene29239.t1	MTR_1g104780	54.274	503	221	4	13	507	12	513	0.0	540
MS.gene29239.t1	MTR_0204s0040	51.200	500	239	4	4	502	10	505	0.0	537
MS.gene29239.t1	MTR_5g006070	55.914	465	195	4	50	511	1	458	0.0	536
MS.gene29239.t1	MTR_4g116770	51.200	500	239	4	4	502	206	701	0.0	535
MS.gene29239.t1	MTR_8g102860	52.883	503	229	5	15	512	18	517	0.0	534
MS.gene29239.t1	MTR_3g007910	54.528	508	196	6	3	507	2	477	0.0	531
MS.gene29239.t1	MTR_3g093060	58.537	451	183	3	50	496	1	451	1.05e-180	515
MS.gene29239.t1	MTR_3g074390	49.590	488	242	3	17	502	22	507	3.76e-177	508
MS.gene29239.t1	MTR_3g074410	49.087	493	245	4	18	508	20	508	5.07e-172	495
MS.gene29239.t1	MTR_8g102860	52.137	468	216	5	50	512	1	465	4.92e-170	488
MS.gene29239.t1	MTR_3g074270	47.826	483	229	3	16	497	16	476	5.88e-165	476
MS.gene29239.t1	MTR_4g116790	51.105	362	174	3	2	362	6	365	1.14e-132	390
MS.gene29239.t1	MTR_3g074380	50.287	348	169	3	17	362	20	365	2.08e-121	361
MS.gene29239.t1	MTR_3g074320	45.312	320	172	3	189	506	20	338	2.40e-100	306
MS.gene29239.t1	MTR_3g074370	45.079	315	171	2	189	501	20	334	3.11e-99	303
MS.gene29239.t1	MTR_3g074340	45.000	320	173	3	189	506	20	338	3.11e-99	303
MS.gene29239.t1	MTR_3g074400	37.609	460	226	12	50	485	1	423	9.66e-87	273
MS.gene29239.t1	MTR_1g038620	79.747	158	15	1	203	360	50	190	9.61e-80	247
MS.gene29239.t1	MTR_4g069500	28.015	539	336	9	1	511	1	515	2.69e-58	202
MS.gene29239.t1	MTR_6g088450	30.271	479	282	11	18	476	53	499	2.89e-56	196
MS.gene29239.t1	MTR_4g072030	29.703	505	303	12	27	508	31	506	3.13e-56	196
MS.gene29239.t1	MTR_4g069500	29.605	456	297	6	77	511	13	465	8.03e-56	194
MS.gene29239.t1	MTR_5g096000	54.144	181	63	1	3	183	2	162	5.59e-54	184
MS.gene29239.t1	MTR_5g096000	54.430	158	67	2	355	507	151	308	1.96e-38	143
MS.gene29239.t1	MTR_3g084110	27.621	496	326	9	20	507	25	495	1.15e-53	189
MS.gene29239.t1	MTR_3g116240	28.119	505	312	10	7	484	8	488	7.06e-53	187
MS.gene29239.t1	MTR_6g018790	29.228	479	300	8	16	490	102	545	8.01e-52	185
MS.gene29239.t1	MTR_5g075300	31.102	508	296	12	7	487	2	482	1.71e-51	183
MS.gene29239.t1	MTR_1g116660	27.254	477	318	9	20	490	32	485	2.63e-51	182
MS.gene29239.t1	MTR_1g116650	27.926	487	305	9	14	490	65	515	1.76e-50	181
MS.gene29239.t1	MTR_7g446340	27.329	483	306	12	22	490	54	505	2.42e-50	181
MS.gene29239.t1	MTR_6g007340	27.329	483	306	12	22	490	54	505	2.42e-50	181
MS.gene29239.t1	MTR_8g103500	28.921	491	296	13	18	487	13	471	6.62e-50	179
MS.gene29239.t1	MTR_7g005910	27.521	476	317	7	20	490	30	482	9.15e-50	178
MS.gene29239.t1	MTR_8g077890	29.435	496	289	11	22	487	18	482	9.23e-50	178
MS.gene29239.t1	MTR_1g114280	55.357	168	52	3	332	499	11	155	3.85e-49	166
MS.gene29239.t1	MTR_7g082270	28.118	473	303	8	16	485	62	500	6.95e-49	176
MS.gene29239.t1	MTR_5g077580	26.095	571	304	13	21	500	24	567	1.10e-46	171
MS.gene29239.t1	MTR_2g013310	28.125	480	304	12	22	489	52	502	1.99e-46	169
MS.gene29239.t1	MTR_2g013310	30.340	412	267	10	90	489	26	429	4.94e-46	167
MS.gene29239.t1	MTR_2g048720	33.036	336	201	5	21	351	24	340	1.07e-45	168
MS.gene29239.t1	MTR_4g077740	29.087	471	291	9	31	484	53	497	2.12e-44	164
MS.gene29239.t1	MTR_2g049020	28.732	355	228	5	20	367	23	359	1.08e-43	163
MS.gene29239.t1	MTR_7g082270	28.235	425	271	7	16	440	62	452	1.42e-43	160
MS.gene29239.t1	MTR_2g026160	29.855	345	208	7	20	351	24	347	2.55e-41	156
MS.gene29239.t1	MTR_0064s0040	50.000	150	61	2	13	162	14	149	2.76e-41	145
MS.gene29239.t1	MTR_7g113970	27.409	467	302	8	21	484	60	492	1.04e-40	153
MS.gene29239.t1	MTR_1g022315	27.079	469	311	8	23	488	49	489	1.60e-40	152
MS.gene29239.t1	MTR_3g074330	47.500	160	75	2	1	153	1	158	1.65e-40	144
MS.gene29239.t1	MTR_3g074360	47.500	160	75	2	1	153	1	158	1.65e-40	144
MS.gene29239.t1	MTR_3g074310	47.500	160	75	2	1	153	1	158	3.50e-40	143
MS.gene29239.t1	MTR_1g022315	27.960	397	276	5	95	488	1	390	1.32e-39	148
MS.gene29239.t1	MTR_8g077300	28.118	473	294	11	22	484	38	474	4.99e-39	148
MS.gene29239.t1	MTR_7g094450	27.178	482	310	10	6	484	27	470	1.10e-38	147
MS.gene29239.t1	MTR_8g077310	26.013	469	317	6	18	484	42	482	1.41e-38	147
MS.gene29239.t1	MTR_7g094110	28.233	464	298	8	23	484	42	472	1.15e-37	144
MS.gene29239.t1	MTR_5g020270	26.752	471	301	9	23	484	50	485	6.73e-37	142
MS.gene29239.t1	MTR_7g113960	27.027	407	273	8	84	484	67	455	1.52e-36	141
MS.gene29239.t1	MTR_8g077310	27.041	392	277	4	95	484	1	385	2.58e-36	139
MS.gene29239.t1	MTR_4g118610	26.556	482	314	8	13	489	42	488	3.01e-36	140
MS.gene29239.t1	MTR_2g020710	25.358	489	323	8	2	484	28	480	5.32e-36	140
MS.gene29239.t1	MTR_2g020710	26.601	406	277	6	85	484	1	391	2.33e-35	136
MS.gene29239.t1	MTR_5g019870	27.586	435	288	9	77	487	48	479	3.06e-35	138
MS.gene29239.t1	MTR_5g020270	27.569	399	266	7	95	484	1	385	1.42e-34	134
MS.gene29239.t1	MTR_4g069500	28.746	327	211	5	204	511	3	326	1.50e-33	130
MS.gene29239.t1	MTR_7g094110	27.468	466	279	10	23	484	42	452	2.16e-31	126
MS.gene29239.t1	MTR_8g077310	28.490	351	221	6	18	366	42	364	3.20e-31	125
MS.gene29239.t1	MTR_3g080240	25.366	410	282	11	89	489	139	533	3.17e-30	124
MS.gene29239.t1	MTR_2g026140	28.406	345	198	9	20	351	24	332	1.09e-29	123
MS.gene29239.t1	MTR_4g064820	27.577	359	229	5	23	364	96	440	2.47e-29	121
MS.gene29239.t1	MTR_5g020270	24.841	471	289	10	23	484	50	464	3.45e-29	120
MS.gene29239.t1	MTR_2g020710	25.714	420	270	8	2	415	28	411	6.52e-29	119
MS.gene29239.t1	MTR_7g113970	28.228	333	208	6	21	351	60	363	1.70e-28	117
MS.gene29239.t1	MTR_4g013205	25.255	392	282	4	94	484	88	469	2.10e-28	118
MS.gene29239.t1	MTR_4g118610	26.829	410	260	8	13	417	42	416	2.60e-28	117
MS.gene29239.t1	MTR_6g087910	25.373	469	308	9	21	484	52	483	8.81e-28	116
MS.gene29239.t1	MTR_2g020710	25.598	418	269	8	2	413	28	409	2.73e-27	114
MS.gene29239.t1	MTR_7g113960	29.242	277	180	5	84	355	67	332	5.46e-27	112
MS.gene29239.t1	MTR_2g020710	25.876	371	237	7	2	366	28	366	6.73e-25	106
MS.gene29239.t1	MTR_3g116060	30.890	191	126	3	75	259	31	221	3.30e-19	91.7
MS.gene29239.t1	MTR_5g024740	26.250	240	154	5	23	259	4	223	2.58e-18	89.0
MS.gene29239.t1	MTR_8g073100	24.765	319	198	9	23	333	4	288	9.10e-18	87.0
MS.gene29239.t1	MTR_5g044910	28.249	177	125	2	85	259	47	223	6.22e-17	84.3
MS.gene29239.t1	MTR_3g118530	30.000	170	117	2	92	259	54	223	8.80e-16	80.9
MS.gene29239.t1	MTR_3g118530	30.409	171	117	2	92	260	54	224	1.71e-15	79.7
MS.gene29239.t1	MTR_4g030040	28.177	181	126	3	88	266	120	298	1.93e-11	66.6
MS.gene29239.t1	MTR_4g030040	28.177	181	126	3	88	266	121	299	1.97e-11	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29239.t1	AT3G19940	71.545	492	138	2	19	509	21	511	0.0	741
MS.gene29239.t1	AT1G50310	69.777	493	146	3	19	509	21	512	0.0	717
MS.gene29239.t1	AT5G23270	66.934	499	162	2	1	496	1	499	0.0	682
MS.gene29239.t1	AT3G19930	65.020	506	172	3	3	505	2	505	0.0	673
MS.gene29239.t1	AT3G19930	65.020	506	172	3	3	505	2	505	0.0	673
MS.gene29239.t1	AT1G11260	61.355	502	190	3	1	499	1	501	0.0	637
MS.gene29239.t1	AT4G21480	63.395	489	177	2	10	497	10	497	0.0	616
MS.gene29239.t1	AT5G26340	56.859	503	213	3	1	500	1	502	0.0	603
MS.gene29239.t1	AT4G02050	54.070	516	228	5	1	511	1	512	0.0	572
MS.gene29239.t1	AT4G02050	54.070	516	228	5	1	511	1	512	0.0	572
MS.gene29239.t1	AT1G77210	53.770	504	225	5	1	499	1	501	0.0	546
MS.gene29239.t1	AT1G77210	53.770	504	225	5	1	499	1	501	0.0	546
MS.gene29239.t1	AT1G50310	70.195	359	105	2	153	509	11	369	0.0	536
MS.gene29239.t1	AT1G34580	50.800	500	239	3	2	496	3	500	0.0	530
MS.gene29239.t1	AT5G26250	53.183	487	222	4	13	497	12	494	0.0	529
MS.gene29239.t1	AT3G05960	51.703	499	232	5	7	500	5	499	0.0	520
MS.gene29239.t1	AT1G07340	53.280	503	226	6	1	499	1	498	3.72e-176	505
MS.gene29239.t1	AT5G61520	51.446	484	228	3	17	495	18	499	1.99e-175	504
MS.gene29239.t1	AT1G34580	51.327	452	213	3	50	496	1	450	2.99e-168	483
MS.gene29239.t1	AT5G61520	51.327	452	213	3	49	495	2	451	7.13e-160	462
MS.gene29239.t1	AT1G77210	54.441	349	155	4	153	499	6	352	1.12e-129	381
MS.gene29239.t1	AT2G16120	29.400	517	312	11	16	504	19	510	9.52e-57	197
MS.gene29239.t1	AT3G18830	28.624	545	311	13	12	509	17	530	5.49e-56	196
MS.gene29239.t1	AT2G16130	29.058	499	305	10	16	490	19	492	6.83e-55	192
MS.gene29239.t1	AT4G36670	30.785	497	288	12	19	488	13	480	7.38e-55	192
MS.gene29239.t1	AT2G18480	30.105	475	281	12	37	487	36	483	1.34e-54	191
MS.gene29239.t1	AT2G20780	28.986	483	300	11	18	488	50	501	2.07e-50	181
MS.gene29239.t1	AT5G16150	29.114	474	303	8	14	484	96	539	2.20e-49	178
MS.gene29239.t1	AT5G16150	29.114	474	303	8	14	484	96	539	2.20e-49	178
MS.gene29239.t1	AT5G16150	29.114	474	303	8	14	484	96	539	2.20e-49	178
MS.gene29239.t1	AT2G43330	28.692	474	312	7	22	490	30	482	3.16e-47	171
MS.gene29239.t1	AT2G20780	30.583	412	264	9	89	488	42	443	6.48e-47	170
MS.gene29239.t1	AT1G30220	30.088	339	212	5	20	351	25	345	1.64e-45	168
MS.gene29239.t1	AT5G59250	27.859	481	303	8	23	484	98	553	3.53e-44	164
MS.gene29239.t1	AT1G08930	27.463	477	299	10	16	484	51	488	2.62e-42	158
MS.gene29239.t1	AT1G08930	27.463	477	299	10	16	484	51	488	2.62e-42	158
MS.gene29239.t1	AT5G17010	27.660	470	299	8	31	484	55	499	4.78e-42	157
MS.gene29239.t1	AT5G17010	27.660	470	299	8	31	484	55	499	4.78e-42	157
MS.gene29239.t1	AT5G17010	27.660	470	299	8	31	484	55	499	4.78e-42	157
MS.gene29239.t1	AT1G75220	27.364	497	308	10	1	488	35	487	1.99e-41	155
MS.gene29239.t1	AT3G05155	25.895	475	315	9	13	485	17	456	2.99e-41	154
MS.gene29239.t1	AT2G35740	29.661	354	221	7	21	364	24	359	4.06e-41	156
MS.gene29239.t1	AT1G54730	26.247	461	301	8	28	484	37	462	8.29e-41	153
MS.gene29239.t1	AT1G08900	28.571	406	270	7	84	484	23	413	1.56e-40	151
MS.gene29239.t1	AT1G08890	27.586	406	276	7	84	485	67	458	2.49e-40	152
MS.gene29239.t1	AT1G08900	28.571	406	270	7	84	484	65	455	2.95e-40	151
MS.gene29239.t1	AT1G08900	28.571	406	270	7	84	484	65	455	2.95e-40	151
MS.gene29239.t1	AT1G08900	28.571	406	270	7	84	484	57	447	3.11e-40	151
MS.gene29239.t1	AT5G18840	26.452	465	306	7	23	484	44	475	1.95e-39	149
MS.gene29239.t1	AT4G16480	28.255	361	225	6	20	367	24	363	3.47e-39	150
MS.gene29239.t1	AT4G16480	28.255	361	225	6	20	367	24	363	3.47e-39	150
MS.gene29239.t1	AT4G16480	28.255	361	225	6	20	367	24	363	3.47e-39	150
MS.gene29239.t1	AT3G03090	27.872	470	298	8	31	484	55	499	4.03e-39	149
MS.gene29239.t1	AT5G27360	26.931	479	299	11	16	484	28	465	4.44e-39	149
MS.gene29239.t1	AT1G19450	26.866	469	311	8	23	488	49	488	9.00e-39	148
MS.gene29239.t1	AT5G27360	26.931	479	299	11	16	484	76	513	1.34e-38	148
MS.gene29239.t1	AT3G05165	26.403	481	299	9	16	484	23	460	1.80e-38	147
MS.gene29239.t1	AT3G05165	26.403	481	299	9	16	484	23	460	1.80e-38	147
MS.gene29239.t1	AT3G05165	26.403	481	299	9	16	484	23	460	1.80e-38	147
MS.gene29239.t1	AT3G05160	27.235	481	295	10	16	484	14	451	1.63e-37	144
MS.gene29239.t1	AT2G48020	27.696	408	275	7	84	486	68	460	2.61e-37	143
MS.gene29239.t1	AT2G48020	27.696	408	275	7	84	486	68	460	2.61e-37	143
MS.gene29239.t1	AT3G05150	27.293	447	295	9	59	497	58	482	5.22e-37	143
MS.gene29239.t1	AT5G27350	26.096	479	303	10	16	484	24	461	7.28e-37	142
MS.gene29239.t1	AT3G05150	27.378	431	286	8	59	484	58	466	9.42e-37	142
MS.gene29239.t1	AT3G05150	27.378	431	286	8	59	484	58	466	9.42e-37	142
MS.gene29239.t1	AT3G05160	28.009	432	269	9	65	484	1	402	9.04e-36	138
MS.gene29239.t1	AT3G05160	28.009	432	269	9	65	484	1	402	9.04e-36	138
MS.gene29239.t1	AT3G05400	25.000	476	318	10	13	484	16	456	2.30e-35	138
MS.gene29239.t1	AT1G08920	25.979	485	296	12	16	484	25	462	4.19e-34	134
MS.gene29239.t1	AT1G54730	25.272	459	287	10	28	484	37	441	4.91e-34	134
MS.gene29239.t1	AT1G08920	26.186	485	302	12	16	484	25	469	7.85e-34	134
MS.gene29239.t1	AT1G54730	25.537	419	273	8	28	442	37	420	1.73e-33	132
MS.gene29239.t1	AT3G05165	25.556	450	296	8	16	461	23	437	1.31e-32	130
MS.gene29239.t1	AT1G08900	27.989	368	245	7	84	446	65	417	1.89e-32	129
MS.gene29239.t1	AT4G04750	25.427	468	311	10	21	484	35	468	1.99e-32	130
MS.gene29239.t1	AT4G04750	25.427	468	311	10	21	484	35	468	1.99e-32	130
MS.gene29239.t1	AT4G04750	25.427	468	311	10	21	484	79	512	2.12e-32	130
MS.gene29239.t1	AT4G04760	25.761	427	292	7	65	486	1	407	3.86e-32	128
MS.gene29239.t1	AT3G05165	26.265	415	267	8	16	426	23	402	6.01e-32	128
MS.gene29239.t1	AT3G05165	26.265	415	267	8	16	426	23	402	6.01e-32	128
MS.gene29239.t1	AT4G04760	25.635	433	297	7	59	486	54	466	7.00e-32	128
MS.gene29239.t1	AT1G54730	26.343	391	249	8	28	414	37	392	9.14e-32	127
MS.gene29239.t1	AT1G54730	26.343	391	249	8	28	414	37	392	9.14e-32	127
MS.gene29239.t1	AT1G79820	25.420	476	305	12	18	484	53	487	8.55e-31	125
MS.gene29239.t1	AT1G79820	25.420	476	305	12	18	484	53	487	8.55e-31	125
MS.gene29239.t1	AT5G27360	27.295	403	242	11	16	408	28	389	4.12e-30	122
MS.gene29239.t1	AT5G27360	26.385	379	253	7	114	484	1	361	4.84e-30	121
MS.gene29239.t1	AT5G27360	26.385	379	253	7	114	484	1	361	4.84e-30	121
MS.gene29239.t1	AT1G08920	25.951	447	268	12	16	446	25	424	1.88e-29	120
MS.gene29239.t1	AT3G05155	25.294	340	222	6	13	351	17	325	2.70e-29	118
MS.gene29239.t1	AT3G05400	26.256	438	287	13	66	484	16	436	2.90e-29	120
MS.gene29239.t1	AT1G05030	24.731	465	306	12	29	484	85	514	3.50e-29	121
MS.gene29239.t1	AT4G04760	25.000	436	293	8	59	486	54	463	7.16e-29	119
MS.gene29239.t1	AT1G54730	27.301	326	206	6	28	351	37	333	8.64e-29	117
MS.gene29239.t1	AT1G67300	24.580	476	305	11	21	484	53	486	3.21e-28	118
MS.gene29239.t1	AT1G67300	24.580	476	305	11	21	484	53	486	3.21e-28	118
MS.gene29239.t1	AT1G05030	24.939	413	288	9	80	484	64	462	3.80e-28	117
MS.gene29239.t1	AT1G67300	24.684	474	308	11	21	484	53	487	9.92e-28	116
MS.gene29239.t1	AT1G54730	24.460	417	259	10	28	442	37	399	5.73e-27	113
MS.gene29239.t1	AT1G67300	24.645	422	265	10	21	431	53	432	8.18e-27	113
MS.gene29239.t1	AT1G67300	24.645	422	265	10	21	431	53	432	8.18e-27	113
MS.gene29239.t1	AT1G67300	25.588	340	211	8	21	351	53	359	1.50e-26	112
MS.gene29239.t1	AT1G67300	25.588	340	211	8	21	351	53	359	1.50e-26	112
MS.gene29239.t1	AT1G79820	25.118	422	267	11	18	431	53	433	5.06e-26	110
MS.gene29239.t1	AT2G48020	29.412	289	189	5	84	370	68	343	7.36e-26	109
MS.gene29239.t1	AT1G54730	26.333	300	193	5	28	325	37	310	9.39e-26	108
MS.gene29239.t1	AT1G54730	26.333	300	193	5	28	325	37	310	9.39e-26	108
MS.gene29239.t1	AT2G48020	29.630	270	180	4	84	351	68	329	3.35e-25	107
MS.gene29239.t1	AT1G54730	25.193	389	235	10	28	414	37	371	3.56e-25	107
MS.gene29239.t1	AT3G51490	28.452	239	150	5	23	259	4	223	1.04e-22	102
MS.gene29239.t1	AT3G51490	28.452	239	150	5	23	259	4	223	1.06e-22	102
MS.gene29239.t1	AT5G17010	25.053	471	250	14	31	484	52	436	1.34e-22	100
MS.gene29239.t1	AT3G20460	20.723	415	291	7	84	484	93	483	7.77e-22	99.0
MS.gene29239.t1	AT3G51490	33.333	174	113	3	89	260	2	174	2.30e-21	98.2
MS.gene29239.t1	AT1G79820	23.529	476	266	10	18	484	53	439	3.09e-21	96.7
MS.gene29239.t1	AT1G20840	30.588	170	116	2	92	259	52	221	1.76e-17	86.3
MS.gene29239.t1	AT1G20840	30.588	170	116	2	92	259	52	221	1.76e-17	86.3
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.22e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.22e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.22e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT4G35300	32.759	174	114	3	89	260	52	224	4.70e-17	85.1
MS.gene29239.t1	AT1G79820	23.944	355	199	7	137	484	87	377	9.22e-16	79.7

Find 108 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGATTTGTAGGTTATTAT+TGG	0.155816	1.1:+23193135	MS.gene29239:intron
CTTATTGGTGCAATACTAAA+TGG	0.189051	1.1:+23192182	MS.gene29239:CDS
GCTGCAAATTTGATCAATTA+TGG	0.240258	1.1:+23192492	MS.gene29239:CDS
ATAATTGGTCGTCTACTTCT+AGG	0.240972	1.1:+23192230	MS.gene29239:CDS
GTCTTCACAGTAGACAAATT+TGG	0.247973	1.1:+23192951	MS.gene29239:CDS
GGTTATGATCTTGGTATTAC+TGG	0.252498	1.1:+23191930	MS.gene29239:CDS
GCCTCTTTCAATCAAGGAAT+TGG	0.266641	1.1:-23192613	None:intergenic
AAATGGATGGAGAGTGTCTT+TGG	0.285568	1.1:+23192530	MS.gene29239:CDS
ATGCTTTGTCACTTGAAGTT+TGG	0.299069	1.1:+23193396	MS.gene29239:CDS
TGTGGAAGTCACATTGGTTT+TGG	0.299321	1.1:+23193520	MS.gene29239:CDS
ACTCTATTCATCTCTTCAAT+TGG	0.302293	1.1:-23193498	None:intergenic
AACGTTGAAATGCTAATAAT+TGG	0.313941	1.1:+23192215	MS.gene29239:CDS
CTATCAATGCTGCAAGGTAT+AGG	0.318723	1.1:-23192085	None:intergenic
CGCAAGGCCTCAATGTTTCT+TGG	0.321805	1.1:+23192146	MS.gene29239:CDS
TGCATGGTCTTGGGGACCAT+TGG	0.324242	1.1:+23193260	MS.gene29239:CDS
CTCACAAATGTTTATTTGTC+AGG	0.326178	1.1:+23193001	MS.gene29239:CDS
TTGCGGCCTTTGCATGGTCT+TGG	0.327852	1.1:+23193250	MS.gene29239:CDS
ATCTTAATTGCATCAAGGTT+TGG	0.334544	1.1:+23193159	MS.gene29239:CDS
TAGTGAAATATGTGCTTTAG+AGG	0.338208	1.1:+23193296	MS.gene29239:CDS
CCGTTCTTTCAACAACTTAC+CGG	0.343743	1.1:+23192807	MS.gene29239:CDS
CATTTAGTATTGCACCAATA+AGG	0.345996	1.1:-23192181	None:intergenic
GGTCGTCTACTTCTAGGATT+TGG	0.352688	1.1:+23192236	MS.gene29239:CDS
TGCGGCCTTTGCATGGTCTT+GGG	0.354730	1.1:+23193251	MS.gene29239:CDS
TGGAGAGTGTCTTTGGGTCT+TGG	0.363674	1.1:+23192537	MS.gene29239:CDS
GTGAGTTGAGGCCTATATTC+TGG	0.368775	1.1:-23192768	None:intergenic
CTCATGTCTGCGGTTATTAG+TGG	0.373226	1.1:+23192897	MS.gene29239:CDS
GTTCCTGATCATGTTGTTGA+TGG	0.378159	1.1:+23193552	MS.gene29239:CDS
TACCAATTGTGATCATCATT+TGG	0.382539	1.1:-23192464	None:intergenic
GCATGGTCTTGGGGACCATT+GGG	0.387260	1.1:+23193261	MS.gene29239:CDS
CCTCTTTCAATCAAGGAATT+GGG	0.388947	1.1:-23192612	None:intergenic
CAAAGCCTAAGATCTTAAAA+AGG	0.389887	1.1:-23192860	None:intergenic
TAAGAGCACAGCAATGAAAA+TGG	0.393637	1.1:-23193457	None:intergenic
TGATGGTGGTAACAACAAAA+AGG	0.404447	1.1:+23193569	MS.gene29239:CDS
TATCAATGCTGCAAGGTATA+GGG	0.407532	1.1:-23192084	None:intergenic
AAACATGTCATTAACACATA+TGG	0.418399	1.1:-23191879	None:intergenic
GAGAAGGTCGGCTTCACCTT+TGG	0.418457	1.1:-23193205	None:intergenic
GGTCTTGGGGACCATTGGGT+TGG	0.420130	1.1:+23193265	MS.gene29239:CDS
ATGGTTGCCTCTTTCAATCA+AGG	0.423463	1.1:-23192619	None:intergenic
TGGGTGTTTCACCTAAGAAA+AGG	0.424327	1.1:-23192593	None:intergenic
CCCAATTCCTTGATTGAAAG+AGG	0.424552	1.1:+23192612	MS.gene29239:CDS
TTGGGGACCATTGGGTTGGT+TGG	0.425742	1.1:+23193269	MS.gene29239:CDS
ACATTACTCAACCAGAATAT+AGG	0.435284	1.1:+23192757	MS.gene29239:CDS
CCTAGACACAAAAGAATTGC+TGG	0.439430	1.1:-23192567	None:intergenic
ACCCGTCTATTTGTCTGAAA+TGG	0.441217	1.1:+23192404	MS.gene29239:CDS
CTCTATTCATCTCTTCAATT+GGG	0.444968	1.1:-23193497	None:intergenic
GAGTGGAATAAAACATTATG+AGG	0.449904	1.1:+23191845	MS.gene29239:CDS
CAGTAGACAAATTTGGAAGA+AGG	0.456163	1.1:+23192958	MS.gene29239:CDS
TTCCAAATGATGATCACAAT+TGG	0.460930	1.1:+23192462	MS.gene29239:CDS
ACATTTATAGCTTGACCTGC+TGG	0.465665	1.1:-23193324	None:intergenic
AAGCAAAGGCAATGTTGAAA+AGG	0.468116	1.1:+23192646	MS.gene29239:CDS
TCAAGTGACAAAGCATGGTT+AGG	0.470864	1.1:-23193389	None:intergenic
GGGTGTTTCACCTAAGAAAA+GGG	0.473888	1.1:-23192592	None:intergenic
CCACCATCAACAACATGATC+AGG	0.475379	1.1:-23193555	None:intergenic
GCTTTAGAGGTTCGACCAGC+AGG	0.479296	1.1:+23193309	MS.gene29239:CDS
AATGGATGGAGAGTGTCTTT+GGG	0.483483	1.1:+23192531	MS.gene29239:CDS
TTCATTCTCTTATACACTCG+TGG	0.483623	1.1:-23191993	None:intergenic
GCATCAAGGTTTGGATTGAC+CGG	0.486421	1.1:+23193168	MS.gene29239:CDS
TACTGGAGGAGTGACTTCTA+TGG	0.491588	1.1:+23191947	MS.gene29239:CDS
AAAAGAATCAATATGGGAGC+TGG	0.494489	1.1:+23191807	None:intergenic
AAGGCCTCAATGTTTCTTGG+TGG	0.494989	1.1:+23192149	MS.gene29239:CDS
TGCTAGTGAAGAAGCTAGTA+AGG	0.497047	1.1:+23192716	MS.gene29239:CDS
TTCCACAATCACAAGAATGA+TGG	0.497068	1.1:+23192121	MS.gene29239:CDS
GGTTGAGTAATGTTCTTCCA+TGG	0.497635	1.1:-23192747	None:intergenic
AGGTTTGGATTGACCGGACA+AGG	0.502495	1.1:+23193174	MS.gene29239:CDS
TTGGAATCTTAATTGCATCA+AGG	0.507931	1.1:+23193154	MS.gene29239:CDS
TTTGGTAAATGATCCTTGTC+CGG	0.509153	1.1:-23193187	None:intergenic
AAGAAGGTTATTATTTCTTG+AGG	0.518335	1.1:+23192974	MS.gene29239:CDS
CATATGTTGCGGCCTTTGCA+TGG	0.520090	1.1:+23193244	MS.gene29239:CDS
AGAAGGTTATTATTTCTTGA+GGG	0.523975	1.1:+23192975	MS.gene29239:CDS
CTACTTCTAGGATTTGGTGT+GGG	0.532326	1.1:+23192242	MS.gene29239:CDS
ATTAGAGGAGCACTTAACAT+TGG	0.539318	1.1:+23192438	MS.gene29239:CDS
CACTAATAACCGCAGACATG+AGG	0.542056	1.1:-23192896	None:intergenic
TCCCATCATTCTTGTGATTG+TGG	0.543740	1.1:-23192123	None:intergenic
CTAGTAAGGTGGAACATCCA+TGG	0.545991	1.1:+23192730	MS.gene29239:CDS
AGCAATGAAAATGGTCATGA+TGG	0.546904	1.1:-23193448	None:intergenic
AAACATGATAACATTAATGC+CGG	0.548089	1.1:-23192826	None:intergenic
GCGGCCTTTGCATGGTCTTG+GGG	0.559027	1.1:+23193252	MS.gene29239:CDS
CCTGATCATGTTGTTGATGG+TGG	0.563360	1.1:+23193555	MS.gene29239:CDS
GGAGCTTTCGTTGAGACGAG+TGG	0.569051	1.1:+23191828	MS.gene29239:CDS
CCGGTAAGTTGTTGAAAGAA+CGG	0.569106	1.1:-23192807	None:intergenic
AGGTTATTATTTCTTGAGGG+TGG	0.575907	1.1:+23192978	MS.gene29239:CDS
CACAAGAATGATGGGACGCA+AGG	0.577104	1.1:+23192130	MS.gene29239:CDS
GCCATTTCAGACAAATAGAC+GGG	0.579473	1.1:-23192405	None:intergenic
CACAAATAAAGAACAAGAGA+AGG	0.579551	1.1:-23193221	None:intergenic
TCCACAATCACAAGAATGAT+GGG	0.581040	1.1:+23192122	MS.gene29239:CDS
AAACTTCAAGTGACAAAGCA+TGG	0.588507	1.1:-23193394	None:intergenic
CTTTATTTGTGCATATGTTG+CGG	0.590940	1.1:+23193233	MS.gene29239:CDS
ATGTCTGCGGTTATTAGTGG+TGG	0.592724	1.1:+23192900	MS.gene29239:CDS
ACTAATAACCGCAGACATGA+GGG	0.599477	1.1:-23192895	None:intergenic
TATGATCTTGGTATTACTGG+AGG	0.600534	1.1:+23191933	MS.gene29239:CDS
TCTACTTCTAGGATTTGGTG+TGG	0.607831	1.1:+23192241	MS.gene29239:CDS
AGCCATTTCAGACAAATAGA+CGG	0.609525	1.1:-23192406	None:intergenic
ACCGAAAAGAAGACCTCCCA+TGG	0.612321	1.1:-23191910	None:intergenic
TTGAAGAGATGAATAGAGTG+TGG	0.617789	1.1:+23193502	MS.gene29239:CDS
AATAAAGAACAAGAGAAGGT+CGG	0.627160	1.1:-23193217	None:intergenic
AGTGGAATAAAACATTATGA+GGG	0.628742	1.1:+23191846	MS.gene29239:CDS
AGGTCAAGCTATAAATGTTG+CGG	0.633836	1.1:+23193329	MS.gene29239:CDS
ATAGAGTGTGGAAGTCACAT+TGG	0.642749	1.1:+23193514	MS.gene29239:CDS
TCTAAAGCACATATTTCACT+AGG	0.647768	1.1:-23193294	None:intergenic
TAAGCCACCAAGAAACATTG+AGG	0.652763	1.1:-23192153	None:intergenic
CTAGGCACCAACCAACCCAA+TGG	0.653417	1.1:-23193276	None:intergenic
TGATGCTTCCCTCATGTCTG+CGG	0.661280	1.1:+23192887	MS.gene29239:CDS
AAGAAGCTATCAATGCTGCA+AGG	0.663331	1.1:-23192091	None:intergenic
AAACTGACAAAAGTGAGTTG+AGG	0.665995	1.1:-23192780	None:intergenic
TGGTCCCCAAGACCATGCAA+AGG	0.672928	1.1:-23193256	None:intergenic
GGACAAGGATCATTTACCAA+AGG	0.690139	1.1:+23193189	MS.gene29239:CDS
TAGTGAAGAAGCTAGTAAGG+TGG	0.692736	1.1:+23192719	MS.gene29239:CDS
GCAATGTTGAAAAGGATCCG+CGG	0.695814	1.1:+23192654	MS.gene29239:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAATTAATCTATGATTTGT+AGG	+	chr1.1:23193125-23193144	MS.gene29239:intron	15.0%
!!!	ATATTCTTCATCAATATTTT+CGG	-	chr1.1:23192682-23192701	None:intergenic	15.0%
!!!	TTTTCTTTTTCAGAATATTA+AGG	-	chr1.1:23192330-23192349	None:intergenic	15.0%
!!!	TATGATTTGTAGGTTATTAT+TGG	+	chr1.1:23193135-23193154	MS.gene29239:intron	20.0%
!	AAACATGATAACATTAATGC+CGG	-	chr1.1:23192829-23192848	None:intergenic	25.0%
!	AAACATGTCATTAACACATA+TGG	-	chr1.1:23191882-23191901	None:intergenic	25.0%
!	AACGTTGAAATGCTAATAAT+TGG	+	chr1.1:23192215-23192234	MS.gene29239:CDS	25.0%
!	AGTGGAATAAAACATTATGA+GGG	+	chr1.1:23191846-23191865	MS.gene29239:CDS	25.0%
!!	AAGAAGGTTATTATTTCTTG+AGG	+	chr1.1:23192974-23192993	MS.gene29239:CDS	25.0%
!!	AGAAGGTTATTATTTCTTGA+GGG	+	chr1.1:23192975-23192994	MS.gene29239:CDS	25.0%
	AATAAAGAACAAGAGAAGGT+CGG	-	chr1.1:23193220-23193239	None:intergenic	30.0%
	ACATTACTCAACCAGAATAT+AGG	+	chr1.1:23192757-23192776	MS.gene29239:CDS	30.0%
	ACTCTATTCATCTCTTCAAT+TGG	-	chr1.1:23193501-23193520	None:intergenic	30.0%
	ATCTTAATTGCATCAAGGTT+TGG	+	chr1.1:23193159-23193178	MS.gene29239:CDS	30.0%
	CAAAGCCTAAGATCTTAAAA+AGG	-	chr1.1:23192863-23192882	None:intergenic	30.0%
	CACAAATAAAGAACAAGAGA+AGG	-	chr1.1:23193224-23193243	None:intergenic	30.0%
	CATTTAGTATTGCACCAATA+AGG	-	chr1.1:23192184-23192203	None:intergenic	30.0%
	CTCACAAATGTTTATTTGTC+AGG	+	chr1.1:23193001-23193020	MS.gene29239:CDS	30.0%
	CTCTATTCATCTCTTCAATT+GGG	-	chr1.1:23193500-23193519	None:intergenic	30.0%
	CTTATTGGTGCAATACTAAA+TGG	+	chr1.1:23192182-23192201	MS.gene29239:CDS	30.0%
	GAGTGGAATAAAACATTATG+AGG	+	chr1.1:23191845-23191864	MS.gene29239:CDS	30.0%
	GCTGCAAATTTGATCAATTA+TGG	+	chr1.1:23192492-23192511	MS.gene29239:CDS	30.0%
	TACCAATTGTGATCATCATT+TGG	-	chr1.1:23192467-23192486	None:intergenic	30.0%
	TAGTGAAATATGTGCTTTAG+AGG	+	chr1.1:23193296-23193315	MS.gene29239:CDS	30.0%
	TTCCAAATGATGATCACAAT+TGG	+	chr1.1:23192462-23192481	MS.gene29239:CDS	30.0%
	TTGGAATCTTAATTGCATCA+AGG	+	chr1.1:23193154-23193173	MS.gene29239:CDS	30.0%
!	CTTTATTTGTGCATATGTTG+CGG	+	chr1.1:23193233-23193252	MS.gene29239:CDS	30.0%
!	TCTAAAGCACATATTTCACT+AGG	-	chr1.1:23193297-23193316	None:intergenic	30.0%
!!!	CTTTTTAAGATCTTAGGCTT+TGG	+	chr1.1:23192861-23192880	MS.gene29239:CDS	30.0%
	AAACTGACAAAAGTGAGTTG+AGG	-	chr1.1:23192783-23192802	None:intergenic	35.0%
	AAACTTCAAGTGACAAAGCA+TGG	-	chr1.1:23193397-23193416	None:intergenic	35.0%
	AAGCAAAGGCAATGTTGAAA+AGG	+	chr1.1:23192646-23192665	MS.gene29239:CDS	35.0%
	AGCAATGAAAATGGTCATGA+TGG	-	chr1.1:23193451-23193470	None:intergenic	35.0%
	AGCCATTTCAGACAAATAGA+CGG	-	chr1.1:23192409-23192428	None:intergenic	35.0%
	AGGTCAAGCTATAAATGTTG+CGG	+	chr1.1:23193329-23193348	MS.gene29239:CDS	35.0%
	ATAATTGGTCGTCTACTTCT+AGG	+	chr1.1:23192230-23192249	MS.gene29239:CDS	35.0%
	CAGTAGACAAATTTGGAAGA+AGG	+	chr1.1:23192958-23192977	MS.gene29239:CDS	35.0%
	CCTAAGATCTTAAAAAGGAC+AGG	-	chr1.1:23192858-23192877	None:intergenic	35.0%
	CCTCTTTCAATCAAGGAATT+GGG	-	chr1.1:23192615-23192634	None:intergenic	35.0%
	CTTCCAAGCATAAAAATGGA+TGG	+	chr1.1:23192517-23192536	MS.gene29239:CDS	35.0%
	GGTACTTCCAAGCATAAAAA+TGG	+	chr1.1:23192513-23192532	MS.gene29239:CDS	35.0%
	GGTTATGATCTTGGTATTAC+TGG	+	chr1.1:23191930-23191949	MS.gene29239:CDS	35.0%
	GTCTTCACAGTAGACAAATT+TGG	+	chr1.1:23192951-23192970	MS.gene29239:CDS	35.0%
	TATCAATGCTGCAAGGTATA+GGG	-	chr1.1:23192087-23192106	None:intergenic	35.0%
	TATGATCTTGGTATTACTGG+AGG	+	chr1.1:23191933-23191952	MS.gene29239:CDS	35.0%
	TCCACAATCACAAGAATGAT+GGG	+	chr1.1:23192122-23192141	MS.gene29239:CDS	35.0%
	TTCATTCTCTTATACACTCG+TGG	-	chr1.1:23191996-23192015	None:intergenic	35.0%
	TTCCACAATCACAAGAATGA+TGG	+	chr1.1:23192121-23192140	MS.gene29239:CDS	35.0%
	TTGAAGAGATGAATAGAGTG+TGG	+	chr1.1:23193502-23193521	MS.gene29239:CDS	35.0%
	TTTGGTAAATGATCCTTGTC+CGG	-	chr1.1:23193190-23193209	None:intergenic	35.0%
!	AGGTTATTATTTCTTGAGGG+TGG	+	chr1.1:23192978-23192997	MS.gene29239:CDS	35.0%
!	ATGCTTTGTCACTTGAAGTT+TGG	+	chr1.1:23193396-23193415	MS.gene29239:CDS	35.0%
!	CTTCTTTTCGGTTATGATCT+TGG	+	chr1.1:23191921-23191940	MS.gene29239:CDS	35.0%
!	GGACTTTTCTTTTTCTTTGC+TGG	+	chr1.1:23193417-23193436	MS.gene29239:CDS	35.0%
!	TAAGAGCACAGCAATGAAAA+TGG	-	chr1.1:23193460-23193479	None:intergenic	35.0%
!!	ATTAGAGGAGCACTTAACAT+TGG	+	chr1.1:23192438-23192457	MS.gene29239:CDS	35.0%
!!	GGTGGCTTATTTTTCCTTAT+TGG	+	chr1.1:23192167-23192186	MS.gene29239:CDS	35.0%
!!	TCTCCATCCATTTTTATGCT+TGG	-	chr1.1:23192523-23192542	None:intergenic	35.0%
!!	TGATGGTGGTAACAACAAAA+AGG	+	chr1.1:23193569-23193588	MS.gene29239:CDS	35.0%
!!!	ACATTGCCTTTGCTTTTTCA+TGG	-	chr1.1:23192641-23192660	None:intergenic	35.0%
!!!	CCTGTCCTTTTTAAGATCTT+AGG	+	chr1.1:23192855-23192874	MS.gene29239:CDS	35.0%
!!!	CTTTTTCTTTGCTGGTTTTG+TGG	+	chr1.1:23193425-23193444	MS.gene29239:CDS	35.0%
	AAGAAGCTATCAATGCTGCA+AGG	-	chr1.1:23192094-23192113	None:intergenic	40.0%
	ACAAACGAGGACACACATAT+AGG	-	chr1.1:23193082-23193101	None:intergenic	40.0%
	ACATTTATAGCTTGACCTGC+TGG	-	chr1.1:23193327-23193346	None:intergenic	40.0%
	ACCCGTCTATTTGTCTGAAA+TGG	+	chr1.1:23192404-23192423	MS.gene29239:CDS	40.0%
	ACTAATAACCGCAGACATGA+GGG	-	chr1.1:23192898-23192917	None:intergenic	40.0%
	AGGCAACCATGAAAAAGCAA+AGG	+	chr1.1:23192632-23192651	MS.gene29239:CDS	40.0%
	ATAGAGTGTGGAAGTCACAT+TGG	+	chr1.1:23193514-23193533	MS.gene29239:CDS	40.0%
	ATGGCTCCTGCAAAAATTAG+AGG	+	chr1.1:23192423-23192442	MS.gene29239:CDS	40.0%
	ATGGTTGCCTCTTTCAATCA+AGG	-	chr1.1:23192622-23192641	None:intergenic	40.0%
	CCCAATTCCTTGATTGAAAG+AGG	+	chr1.1:23192612-23192631	MS.gene29239:CDS	40.0%
	CCGGTAAGTTGTTGAAAGAA+CGG	-	chr1.1:23192810-23192829	None:intergenic	40.0%
	CCGTTCTTTCAACAACTTAC+CGG	+	chr1.1:23192807-23192826	MS.gene29239:CDS	40.0%
	CCTAGACACAAAAGAATTGC+TGG	-	chr1.1:23192570-23192589	None:intergenic	40.0%
	CTATCAATGCTGCAAGGTAT+AGG	-	chr1.1:23192088-23192107	None:intergenic	40.0%
	GCCATTTCAGACAAATAGAC+GGG	-	chr1.1:23192408-23192427	None:intergenic	40.0%
	GCCTCTTTCAATCAAGGAAT+TGG	-	chr1.1:23192616-23192635	None:intergenic	40.0%
	GGACAAGGATCATTTACCAA+AGG	+	chr1.1:23193189-23193208	MS.gene29239:CDS	40.0%
	GGGTGTTTCACCTAAGAAAA+GGG	-	chr1.1:23192595-23192614	None:intergenic	40.0%
	GGTTGAGTAATGTTCTTCCA+TGG	-	chr1.1:23192750-23192769	None:intergenic	40.0%
	GTTCCTGATCATGTTGTTGA+TGG	+	chr1.1:23193552-23193571	MS.gene29239:CDS	40.0%
	TAAGCCACCAAGAAACATTG+AGG	-	chr1.1:23192156-23192175	None:intergenic	40.0%
	TAGTGAAGAAGCTAGTAAGG+TGG	+	chr1.1:23192719-23192738	MS.gene29239:CDS	40.0%
	TATGTGTGTCCTCGTTTGTA+TGG	+	chr1.1:23193083-23193102	MS.gene29239:intron	40.0%
	TCAAGTGACAAAGCATGGTT+AGG	-	chr1.1:23193392-23193411	None:intergenic	40.0%
	TCCCATCATTCTTGTGATTG+TGG	-	chr1.1:23192126-23192145	None:intergenic	40.0%
	TGAACAGTTCCATACAAACG+AGG	-	chr1.1:23193095-23193114	None:intergenic	40.0%
	TGCTAGTGAAGAAGCTAGTA+AGG	+	chr1.1:23192716-23192735	MS.gene29239:CDS	40.0%
	TGGGTGTTTCACCTAAGAAA+AGG	-	chr1.1:23192596-23192615	None:intergenic	40.0%
!	ACATGTTTTGTAGCTGCCAT+GGG	+	chr1.1:23191894-23191913	MS.gene29239:CDS	40.0%
!	AGTGCTCCTCTAATTTTTGC+AGG	-	chr1.1:23192432-23192451	None:intergenic	40.0%
!	CATCAATATTTTCGGTTCCG+CGG	-	chr1.1:23192674-23192693	None:intergenic	40.0%
!	CCAGCAATTCTTTTGTGTCT+AGG	+	chr1.1:23192567-23192586	MS.gene29239:CDS	40.0%
!	CTCTTCAATTGGGACGTTTT+TGG	-	chr1.1:23193490-23193509	None:intergenic	40.0%
!!	AAATGGATGGAGAGTGTCTT+TGG	+	chr1.1:23192530-23192549	MS.gene29239:CDS	40.0%
!!	AATGGATGGAGAGTGTCTTT+GGG	+	chr1.1:23192531-23192550	MS.gene29239:CDS	40.0%
!!	CTACTTCTAGGATTTGGTGT+GGG	+	chr1.1:23192242-23192261	MS.gene29239:CDS	40.0%
!!	TCTACTTCTAGGATTTGGTG+TGG	+	chr1.1:23192241-23192260	MS.gene29239:CDS	40.0%
!!	TGTCTAGGATCCCTTTTCTT+AGG	+	chr1.1:23192582-23192601	MS.gene29239:CDS	40.0%
!!!	AATTGGGACGTTTTTGGTCT+CGG	-	chr1.1:23193484-23193503	None:intergenic	40.0%
!!!	TGTGGAAGTCACATTGGTTT+TGG	+	chr1.1:23193520-23193539	MS.gene29239:CDS	40.0%
	AAGGCCTCAATGTTTCTTGG+TGG	+	chr1.1:23192149-23192168	MS.gene29239:CDS	45.0%
	ATGTCTGCGGTTATTAGTGG+TGG	+	chr1.1:23192900-23192919	MS.gene29239:CDS	45.0%
	CACTAATAACCGCAGACATG+AGG	-	chr1.1:23192899-23192918	None:intergenic	45.0%
	CCACCATCAACAACATGATC+AGG	-	chr1.1:23193558-23193577	None:intergenic	45.0%
	CTAGTAAGGTGGAACATCCA+TGG	+	chr1.1:23192730-23192749	MS.gene29239:CDS	45.0%
	CTCATGTCTGCGGTTATTAG+TGG	+	chr1.1:23192897-23192916	MS.gene29239:CDS	45.0%
	GCAATGTTGAAAAGGATCCG+CGG	+	chr1.1:23192654-23192673	MS.gene29239:CDS	45.0%
	GCATCAAGGTTTGGATTGAC+CGG	+	chr1.1:23193168-23193187	MS.gene29239:CDS	45.0%
	TACTGGAGGAGTGACTTCTA+TGG	+	chr1.1:23191947-23191966	MS.gene29239:CDS	45.0%
!	CCTGATCATGTTGTTGATGG+TGG	+	chr1.1:23193555-23193574	MS.gene29239:CDS	45.0%
!	GACATGTTTTGTAGCTGCCA+TGG	+	chr1.1:23191893-23191912	MS.gene29239:CDS	45.0%
!	GTGAGTTGAGGCCTATATTC+TGG	-	chr1.1:23192771-23192790	None:intergenic	45.0%
!	TGGTGTGGGATTTTGCAATC+AGG	+	chr1.1:23192256-23192275	MS.gene29239:CDS	45.0%
!!	GGTCGTCTACTTCTAGGATT+TGG	+	chr1.1:23192236-23192255	MS.gene29239:CDS	45.0%
!!!	ATTGGGACGTTTTTGGTCTC+GGG	-	chr1.1:23193483-23193502	None:intergenic	45.0%
	ACCGAAAAGAAGACCTCCCA+TGG	-	chr1.1:23191913-23191932	None:intergenic	50.0%
	AGGTTTGGATTGACCGGACA+AGG	+	chr1.1:23193174-23193193	MS.gene29239:CDS	50.0%
	CATATGTTGCGGCCTTTGCA+TGG	+	chr1.1:23193244-23193263	MS.gene29239:CDS	50.0%
	CGCAAGGCCTCAATGTTTCT+TGG	+	chr1.1:23192146-23192165	MS.gene29239:CDS	50.0%
	TGATGCTTCCCTCATGTCTG+CGG	+	chr1.1:23192887-23192906	MS.gene29239:CDS	50.0%
!	CACAAGAATGATGGGACGCA+AGG	+	chr1.1:23192130-23192149	MS.gene29239:CDS	50.0%
!	GCCATGGGAGGTCTTCTTTT+CGG	+	chr1.1:23191909-23191928	MS.gene29239:CDS	50.0%
!	TGTTTTGTAGCTGCCATGGG+AGG	+	chr1.1:23191897-23191916	MS.gene29239:CDS	50.0%
!!	TGGAGAGTGTCTTTGGGTCT+TGG	+	chr1.1:23192537-23192556	MS.gene29239:CDS	50.0%
	CTAGGCACCAACCAACCCAA+TGG	-	chr1.1:23193279-23193298	None:intergenic	55.0%
	GGAGCTTTCGTTGAGACGAG+TGG	+	chr1.1:23191828-23191847	MS.gene29239:CDS	55.0%
	TGCGGCCTTTGCATGGTCTT+GGG	+	chr1.1:23193251-23193270	MS.gene29239:CDS	55.0%
	TGGTCCCCAAGACCATGCAA+AGG	-	chr1.1:23193259-23193278	None:intergenic	55.0%
	TTGCGGCCTTTGCATGGTCT+TGG	+	chr1.1:23193250-23193269	MS.gene29239:CDS	55.0%
!	GAGAAGGTCGGCTTCACCTT+TGG	-	chr1.1:23193208-23193227	None:intergenic	55.0%
!	GCATGGTCTTGGGGACCATT+GGG	+	chr1.1:23193261-23193280	MS.gene29239:CDS	55.0%
!	TGCATGGTCTTGGGGACCAT+TGG	+	chr1.1:23193260-23193279	MS.gene29239:CDS	55.0%
!!	GCTTTAGAGGTTCGACCAGC+AGG	+	chr1.1:23193309-23193328	MS.gene29239:CDS	55.0%
!!	TTGGGGACCATTGGGTTGGT+TGG	+	chr1.1:23193269-23193288	MS.gene29239:CDS	55.0%
	GGTCTTGGGGACCATTGGGT+TGG	+	chr1.1:23193265-23193284	MS.gene29239:CDS	60.0%
!	GCGGCCTTTGCATGGTCTTG+GGG	+	chr1.1:23193252-23193271	MS.gene29239:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	23191819	23193602	23191819	ID=MS.gene29239
chr1.1	mRNA	23191819	23193602	23191819	ID=MS.gene29239.t1;Parent=MS.gene29239
chr1.1	exon	23191819	23192277	23191819	ID=MS.gene29239.t1.exon1;Parent=MS.gene29239.t1
chr1.1	CDS	23191819	23192277	23191819	ID=cds.MS.gene29239.t1;Parent=MS.gene29239.t1
chr1.1	exon	23192399	23193022	23192399	ID=MS.gene29239.t1.exon2;Parent=MS.gene29239.t1
chr1.1	CDS	23192399	23193022	23192399	ID=cds.MS.gene29239.t1;Parent=MS.gene29239.t1
chr1.1	exon	23193147	23193602	23193147	ID=MS.gene29239.t1.exon3;Parent=MS.gene29239.t1
chr1.1	CDS	23193147	23193602	23193147	ID=cds.MS.gene29239.t1;Parent=MS.gene29239.t1

Gene Sequence

>MS.gene29239

ATGGGAGCTGGAGCTTTCGTTGAGACGAGTGGAATAAAACATTATGAGGGAAGAGTGACTCCATATGTGTTAATGACATGTTTTGTAGCTGCCATGGGAGGTCTTCTTTTCGGTTATGATCTTGGTATTACTGGAGGAGTGACTTCTATGGATGAATTCTTGATCAAATTCTTTCCACGAGTGTATAAGAGAATGAAAGATGAAACACATAATACAAGTCAATATTGTAAATTTGATGATCAAATTTTAACACTATTCACATCTTCCCTATACCTTGCAGCATTGATAGCTTCTTTCTTTGCTTCCACAATCACAAGAATGATGGGACGCAAGGCCTCAATGTTTCTTGGTGGCTTATTTTTCCTTATTGGTGCAATACTAAATGGATTAGCAGCTAACGTTGAAATGCTAATAATTGGTCGTCTACTTCTAGGATTTGGTGTGGGATTTTGCAATCAGGTAAGAATCATCTCTAATTTTTTATAAGTTGTATATATTTAATTAAATTCCTTAATATTCTGAAAAAGAAAATAATACATAATTAACTAATTTTTGTCTTTGTTATCTATTGTCTAAACAGTCTGTACCCGTCTATTTGTCTGAAATGGCTCCTGCAAAAATTAGAGGAGCACTTAACATTGGCTTCCAAATGATGATCACAATTGGTATTCTAGCTGCAAATTTGATCAATTATGGTACTTCCAAGCATAAAAATGGATGGAGAGTGTCTTTGGGTCTTGGAGCAGTGCCAGCAATTCTTTTGTGTCTAGGATCCCTTTTCTTAGGTGAAACACCCAATTCCTTGATTGAAAGAGGCAACCATGAAAAAGCAAAGGCAATGTTGAAAAGGATCCGCGGAACCGAAAATATTGATGAAGAATATCAAGATCTTGTTGATGCTAGTGAAGAAGCTAGTAAGGTGGAACATCCATGGAAGAACATTACTCAACCAGAATATAGGCCTCAACTCACTTTTGTCAGTTTTATTCCGTTCTTTCAACAACTTACCGGCATTAATGTTATCATGTTTTACGCTCCTGTCCTTTTTAAGATCTTAGGCTTTGGTGATGATGCTTCCCTCATGTCTGCGGTTATTAGTGGTGGCGTCAATGTTGTTGCTACACTTGTTTCTGTCTTCACAGTAGACAAATTTGGAAGAAGGTTATTATTTCTTGAGGGTGGCTCACAAATGTTTATTTGTCAGGTAAAAATTGACACATTTATTTCTTTTAGATTTTCATACGTAACGCTCAAGTTAAACCTATATGTGTGTCCTCGTTTGTATGGAACTGTTCATGTACATACTATAATTAATCTATGATTTGTAGGTTATTATTGGAATCTTAATTGCATCAAGGTTTGGATTGACCGGACAAGGATCATTTACCAAAGGTGAAGCCGACCTTCTCTTGTTCTTTATTTGTGCATATGTTGCGGCCTTTGCATGGTCTTGGGGACCATTGGGTTGGTTGGTGCCTAGTGAAATATGTGCTTTAGAGGTTCGACCAGCAGGTCAAGCTATAAATGTTGCGGTGAACATGTTCTTCACATTTATGATTGCTCAAGTCTTCCTAACCATGCTTTGTCACTTGAAGTTTGGACTTTTCTTTTTCTTTGCTGGTTTTGTGGCCATCATGACCATTTTCATTGCTGTGCTCTTACCCGAGACCAAAAACGTCCCAATTGAAGAGATGAATAGAGTGTGGAAGTCACATTGGTTTTGGACAAAGTATGTTCCTGATCATGTTGTTGATGGTGGTAACAACAAAAAGGTTGATCCTTGA

Protein sequence

>MS.gene29239.t1

MGAGAFVETSGIKHYEGRVTPYVLMTCFVAAMGGLLFGYDLGITGGVTSMDEFLIKFFPRVYKRMKDETHNTSQYCKFDDQILTLFTSSLYLAALIASFFASTITRMMGRKASMFLGGLFFLIGAILNGLAANVEMLIIGRLLLGFGVGFCNQSVPVYLSEMAPAKIRGALNIGFQMMITIGILAANLINYGTSKHKNGWRVSLGLGAVPAILLCLGSLFLGETPNSLIERGNHEKAKAMLKRIRGTENIDEEYQDLVDASEEASKVEHPWKNITQPEYRPQLTFVSFIPFFQQLTGINVIMFYAPVLFKILGFGDDASLMSAVISGGVNVVATLVSVFTVDKFGRRLLFLEGGSQMFICQVIIGILIASRFGLTGQGSFTKGEADLLLFFICAYVAAFAWSWGPLGWLVPSEICALEVRPAGQAINVAVNMFFTFMIAQVFLTMLCHLKFGLFFFFAGFVAIMTIFIAVLLPETKNVPIEEMNRVWKSHWFWTKYVPDHVVDGGNNKKVDP