AlfalfaGEDB | MS.gene29241

M. sativa cultivar XinJiangDaYe / MS.gene29241

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29241.t1	XP_003589734.2	97.7	512	12	0	1	512	1	512	5.00E-286	993

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29241.t1	Q9LT15	70.4	510	147	3	1	507	1	509	8.8e-207	721.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29241.t1	G7IBF1	97.7	512	12	0	1	512	1	512	3.6e-286	993.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene29241	MS.gene78842	PPI
MS.gene63888	MS.gene29241	PPI
MS.gene002806	MS.gene29241	PPI
MS.gene29241	MS.gene073258	PPI
MS.gene81380	MS.gene29241	PPI
MS.gene29241	MS.gene017905	PPI
MS.gene058372	MS.gene29241	PPI
MS.gene29241	MS.gene031757	PPI
MS.gene29304	MS.gene29241	PPI
MS.gene29241	MS.gene00961	PPI
MS.gene78329	MS.gene29241	PPI
MS.gene29241	MS.gene066530	PPI
MS.gene29240	MS.gene29241	PPI
MS.gene72918	MS.gene29241	PPI
MS.gene29241	MS.gene26272	PPI
MS.gene29241	MS.gene04695	PPI
MS.gene80819	MS.gene29241	PPI
MS.gene70727	MS.gene29241	PPI
MS.gene062929	MS.gene29241	PPI
MS.gene50704	MS.gene29241	PPI
MS.gene27308	MS.gene29241	PPI
MS.gene29241	MS.gene28482	PPI
MS.gene52737	MS.gene29241	PPI
MS.gene29241	MS.gene91107	PPI
MS.gene29241	MS.gene24951	PPI
MS.gene049813	MS.gene29241	PPI
MS.gene29241	MS.gene41130	PPI
MS.gene24951	MS.gene29241	PPI
MS.gene29241	MS.gene33740	PPI
MS.gene29241	MS.gene009409	PPI
MS.gene29241	MS.gene072437	PPI
MS.gene026190	MS.gene29241	PPI
MS.gene88587	MS.gene29241	PPI
MS.gene29241	MS.gene87411	PPI
MS.gene29241	MS.gene57711	PPI
MS.gene56212	MS.gene29241	PPI
MS.gene29241	MS.gene91108	PPI
MS.gene33406	MS.gene29241	PPI
MS.gene030874	MS.gene29241	PPI
MS.gene29241	MS.gene026188	PPI
MS.gene29241	MS.gene55171	PPI
MS.gene29241	MS.gene90685	PPI
MS.gene036638	MS.gene29241	PPI
MS.gene29241	MS.gene04694	PPI
MS.gene78327	MS.gene29241	PPI
MS.gene29241	MS.gene80690	PPI
MS.gene84416	MS.gene29241	PPI
MS.gene55173	MS.gene29241	PPI
MS.gene29241	MS.gene23356	PPI
MS.gene29241	MS.gene48055	PPI
MS.gene29241	MS.gene57358	PPI
MS.gene29241	MS.gene45698	PPI
MS.gene052538	MS.gene29241	PPI
MS.gene29241	MS.gene88585	PPI
MS.gene29241	MS.gene32188	PPI
MS.gene28665	MS.gene29241	PPI
MS.gene88586	MS.gene29241	PPI
MS.gene29241	MS.gene014127	PPI
MS.gene52719	MS.gene29241	PPI
MS.gene066532	MS.gene29241	PPI
MS.gene014297	MS.gene29241	PPI
MS.gene065799	MS.gene29241	PPI
MS.gene50065	MS.gene29241	PPI
MS.gene055946	MS.gene29241	PPI
MS.gene27999	MS.gene29241	PPI
MS.gene29241	MS.gene060358	PPI
MS.gene76380	MS.gene29241	PPI
MS.gene056687	MS.gene29241	PPI
MS.gene004491	MS.gene29241	PPI
MS.gene04674	MS.gene29241	PPI
MS.gene041419	MS.gene29241	PPI
MS.gene29241	MS.gene98665	PPI
MS.gene29241	MS.gene006546	PPI
MS.gene011944	MS.gene29241	PPI
MS.gene064881	MS.gene29241	PPI
MS.gene29241	MS.gene66840	PPI
MS.gene072436	MS.gene29241	PPI
MS.gene017222	MS.gene29241	PPI
MS.gene25807	MS.gene29241	PPI
MS.gene021157	MS.gene29241	PPI
MS.gene29241	MS.gene30558	PPI
MS.gene068273	MS.gene29241	PPI
MS.gene29241	MS.gene003641	PPI
MS.gene29241	MS.gene29239	PPI
MS.gene32215	MS.gene29241	PPI
MS.gene42509	MS.gene29241	PPI
MS.gene29241	MS.gene003775	PPI
MS.gene026189	MS.gene29241	PPI
MS.gene26968	MS.gene29241	PPI
MS.gene29241	MS.gene78328	PPI
MS.gene29241	MS.gene29303	PPI
MS.gene29241	MS.gene24272	PPI
MS.gene29241	MS.gene004000	PPI
MS.gene56211	MS.gene29241	PPI
MS.gene47969	MS.gene29241	PPI
MS.gene006547	MS.gene29241	PPI
MS.gene068492	MS.gene29241	PPI
MS.gene29241	MS.gene020721	PPI
MS.gene041500	MS.gene29241	PPI
MS.gene29241	MS.gene069970	PPI
MS.gene29241	MS.gene044198	PPI
MS.gene066531	MS.gene29241	PPI
MS.gene29241	MS.gene018043	PPI
MS.gene036548	MS.gene29241	PPI
MS.gene29241	MS.gene58760	PPI
MS.gene065882	MS.gene29241	PPI
MS.gene29241	MS.gene42511	PPI
MS.gene91109	MS.gene29241	PPI
MS.gene29241	MS.gene29636	PPI
MS.gene018060	MS.gene29241	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29241.t1	MTR_1g038630	97.656	512	12	0	1	512	1	512	0.0	1023
MS.gene29241.t1	MTR_1g038600	94.531	512	10	1	1	512	1	494	0.0	978
MS.gene29241.t1	MTR_5g082540	78.698	507	108	0	1	507	1	507	0.0	815
MS.gene29241.t1	MTR_4g091370	65.112	493	166	4	13	500	13	504	0.0	614
MS.gene29241.t1	MTR_3g008160	58.943	492	196	4	13	501	13	501	0.0	602
MS.gene29241.t1	MTR_0009s0370	59.000	500	200	3	1	497	1	498	0.0	601
MS.gene29241.t1	MTR_5g041550	62.525	499	183	3	3	497	2	500	0.0	601
MS.gene29241.t1	MTR_3g093010	59.412	510	201	3	3	506	2	511	0.0	593
MS.gene29241.t1	MTR_4g090600	62.880	493	178	4	11	500	11	501	0.0	589
MS.gene29241.t1	MTR_5g006070	56.088	501	210	4	14	511	13	506	0.0	588
MS.gene29241.t1	MTR_0204s0020	56.674	487	204	4	14	498	12	493	0.0	582
MS.gene29241.t1	MTR_0204s0020	56.263	487	203	5	14	498	12	490	0.0	573
MS.gene29241.t1	MTR_5g094760	54.762	504	218	4	3	500	2	501	0.0	571
MS.gene29241.t1	MTR_3g023480	57.959	490	203	2	14	500	12	501	0.0	569
MS.gene29241.t1	MTR_1g104770	55.200	500	220	3	1	497	1	499	0.0	563
MS.gene29241.t1	MTR_1g104750	54.000	500	225	4	1	497	1	498	0.0	563
MS.gene29241.t1	MTR_7g091690	56.082	485	208	3	15	498	19	499	0.0	562
MS.gene29241.t1	MTR_3g008170	55.664	512	220	5	1	508	1	509	0.0	558
MS.gene29241.t1	MTR_3g008160	58.901	455	181	4	50	501	1	452	0.0	550
MS.gene29241.t1	MTR_4g116790	51.400	500	236	4	2	499	6	500	0.0	544
MS.gene29241.t1	MTR_6g087040	53.069	505	229	5	1	500	1	502	0.0	542
MS.gene29241.t1	MTR_6g088375	53.069	505	229	5	1	500	1	502	0.0	542
MS.gene29241.t1	MTR_1g104780	54.274	503	221	4	13	507	12	513	0.0	541
MS.gene29241.t1	MTR_0204s0040	51.200	500	239	3	4	502	10	505	0.0	538
MS.gene29241.t1	MTR_5g006070	56.129	465	194	4	50	511	1	458	0.0	538
MS.gene29241.t1	MTR_8g102860	53.280	503	227	5	15	512	18	517	0.0	537
MS.gene29241.t1	MTR_4g116770	51.200	500	239	3	4	502	206	701	0.0	536
MS.gene29241.t1	MTR_3g007910	54.134	508	198	5	3	507	2	477	0.0	530
MS.gene29241.t1	MTR_3g093060	58.980	451	181	3	50	496	1	451	0.0	516
MS.gene29241.t1	MTR_3g074390	49.695	491	243	3	14	502	19	507	4.91e-179	513
MS.gene29241.t1	MTR_3g074410	49.095	497	247	4	14	508	16	508	7.49e-174	499
MS.gene29241.t1	MTR_8g102860	52.564	468	214	5	50	512	1	465	2.99e-171	491
MS.gene29241.t1	MTR_3g074270	47.189	498	240	3	1	497	1	476	2.54e-165	477
MS.gene29241.t1	MTR_4g116790	51.240	363	172	3	2	362	6	365	1.36e-132	390
MS.gene29241.t1	MTR_3g074380	50.427	351	170	3	14	362	17	365	7.95e-123	364
MS.gene29241.t1	MTR_3g074320	46.250	320	169	3	189	506	20	338	1.80e-102	311
MS.gene29241.t1	MTR_3g074340	46.032	315	168	2	189	501	20	334	2.12e-101	308
MS.gene29241.t1	MTR_3g074370	46.032	315	168	2	189	501	20	334	2.31e-101	308
MS.gene29241.t1	MTR_3g074400	36.819	459	231	10	50	485	1	423	2.97e-87	275
MS.gene29241.t1	MTR_1g038620	79.747	158	15	1	203	360	50	190	2.50e-79	246
MS.gene29241.t1	MTR_4g069500	28.200	539	335	9	1	511	1	515	5.82e-60	206
MS.gene29241.t1	MTR_4g072030	30.237	506	299	13	27	508	31	506	2.11e-57	199
MS.gene29241.t1	MTR_4g069500	29.605	456	297	6	77	511	13	465	3.50e-56	195
MS.gene29241.t1	MTR_6g088450	29.752	484	288	11	13	476	48	499	1.58e-55	194
MS.gene29241.t1	MTR_3g116240	28.119	505	312	10	7	484	8	488	4.84e-54	190
MS.gene29241.t1	MTR_5g096000	54.144	181	63	1	3	183	2	162	5.65e-54	184
MS.gene29241.t1	MTR_5g096000	55.063	158	66	2	355	507	151	308	3.51e-39	145
MS.gene29241.t1	MTR_5g075300	31.683	505	291	12	7	484	2	479	1.49e-53	188
MS.gene29241.t1	MTR_3g084110	28.169	497	322	10	20	507	25	495	6.42e-53	187
MS.gene29241.t1	MTR_6g018790	30.063	479	296	9	16	490	102	545	9.69e-53	187
MS.gene29241.t1	MTR_7g446340	27.126	494	313	12	12	490	44	505	3.38e-51	183
MS.gene29241.t1	MTR_6g007340	27.126	494	313	12	12	490	44	505	3.38e-51	183
MS.gene29241.t1	MTR_1g116660	27.731	476	315	9	21	490	33	485	7.85e-51	181
MS.gene29241.t1	MTR_8g103500	29.459	499	293	14	13	487	8	471	1.16e-50	181
MS.gene29241.t1	MTR_1g116650	27.975	479	297	9	21	490	76	515	4.68e-50	180
MS.gene29241.t1	MTR_7g005910	27.883	477	314	8	20	490	30	482	5.66e-50	179
MS.gene29241.t1	MTR_1g114280	56.548	168	50	3	332	499	11	155	5.94e-50	169
MS.gene29241.t1	MTR_8g077890	29.032	496	291	11	22	487	18	482	6.59e-50	179
MS.gene29241.t1	MTR_7g082270	28.541	473	301	8	16	485	62	500	8.17e-50	178
MS.gene29241.t1	MTR_2g013310	28.125	480	304	12	22	489	52	502	1.17e-47	173
MS.gene29241.t1	MTR_2g013310	30.583	412	266	10	90	489	26	429	3.08e-47	170
MS.gene29241.t1	MTR_2g048720	33.333	336	200	5	21	351	24	340	5.17e-46	169
MS.gene29241.t1	MTR_5g077580	25.919	571	305	13	21	500	24	567	1.10e-45	168
MS.gene29241.t1	MTR_4g077740	29.087	471	291	9	31	484	53	497	7.98e-45	165
MS.gene29241.t1	MTR_7g082270	28.706	425	269	7	16	440	62	452	2.07e-44	163
MS.gene29241.t1	MTR_2g049020	28.814	354	227	4	21	367	24	359	1.08e-43	163
MS.gene29241.t1	MTR_7g113970	27.623	467	301	8	21	484	60	492	1.79e-41	155
MS.gene29241.t1	MTR_1g022315	27.505	469	309	8	23	488	49	489	3.27e-41	154
MS.gene29241.t1	MTR_0064s0040	50.667	150	60	3	13	162	14	149	3.57e-41	145
MS.gene29241.t1	MTR_2g026160	30.145	345	207	7	20	351	24	347	4.17e-41	156
MS.gene29241.t1	MTR_3g074330	48.125	160	74	2	1	153	1	158	8.50e-41	145
MS.gene29241.t1	MTR_3g074360	48.125	160	74	2	1	153	1	158	8.50e-41	145
MS.gene29241.t1	MTR_3g074310	48.125	160	74	2	1	153	1	158	2.25e-40	144
MS.gene29241.t1	MTR_1g022315	28.463	397	274	5	95	488	1	390	2.96e-40	150
MS.gene29241.t1	MTR_8g077310	26.226	469	316	6	18	484	42	482	3.71e-40	152
MS.gene29241.t1	MTR_7g094450	28.288	403	275	5	84	484	80	470	3.77e-39	149
MS.gene29241.t1	MTR_8g077300	26.824	466	309	7	22	484	38	474	1.07e-38	147
MS.gene29241.t1	MTR_7g113960	26.141	482	310	11	10	484	13	455	1.12e-37	144
MS.gene29241.t1	MTR_7g094110	27.371	464	302	8	23	484	42	472	2.05e-37	144
MS.gene29241.t1	MTR_8g077310	27.041	392	277	4	95	484	1	385	5.20e-37	141
MS.gene29241.t1	MTR_5g020270	26.115	471	304	9	23	484	50	485	6.34e-37	142
MS.gene29241.t1	MTR_4g118610	26.763	482	313	8	13	489	42	488	2.24e-36	141
MS.gene29241.t1	MTR_2g020710	25.153	489	324	8	2	484	28	480	1.09e-35	139
MS.gene29241.t1	MTR_2g020710	26.355	406	278	6	85	484	1	391	4.24e-35	135
MS.gene29241.t1	MTR_5g020270	27.068	399	268	7	95	484	1	385	2.35e-34	134
MS.gene29241.t1	MTR_5g019870	27.126	435	290	9	77	487	48	479	4.00e-34	135
MS.gene29241.t1	MTR_4g069500	28.440	327	212	5	204	511	3	326	6.37e-34	131
MS.gene29241.t1	MTR_8g077310	28.490	351	221	6	18	366	42	364	1.21e-31	126
MS.gene29241.t1	MTR_3g080240	24.635	479	311	13	21	489	95	533	3.80e-31	127
MS.gene29241.t1	MTR_7g094110	27.039	466	281	10	23	484	42	452	2.12e-30	124
MS.gene29241.t1	MTR_5g020270	24.628	471	290	10	23	484	50	464	9.07e-30	122
MS.gene29241.t1	MTR_2g026140	28.696	345	197	9	20	351	24	332	1.95e-29	122
MS.gene29241.t1	MTR_4g064820	28.134	359	227	6	23	364	96	440	2.42e-29	121
MS.gene29241.t1	MTR_4g013205	23.861	461	313	7	29	484	42	469	7.75e-29	119
MS.gene29241.t1	MTR_6g087910	25.265	471	306	9	21	484	52	483	1.05e-28	119
MS.gene29241.t1	MTR_2g020710	25.476	420	271	8	2	415	28	411	1.16e-28	118
MS.gene29241.t1	MTR_7g113970	28.529	333	207	6	21	351	60	363	1.27e-28	118
MS.gene29241.t1	MTR_4g118610	27.073	410	259	8	13	417	42	416	2.44e-28	117
MS.gene29241.t1	MTR_7g113960	26.989	352	219	8	10	355	13	332	3.01e-27	113
MS.gene29241.t1	MTR_2g020710	25.359	418	270	8	2	413	28	409	4.40e-27	113
MS.gene29241.t1	MTR_2g020710	25.606	371	238	7	2	366	28	366	9.66e-25	106
MS.gene29241.t1	MTR_3g116060	31.414	191	125	3	75	259	31	221	2.33e-19	92.0
MS.gene29241.t1	MTR_8g073100	25.392	319	196	9	23	333	4	288	2.21e-18	89.0
MS.gene29241.t1	MTR_5g024740	26.667	240	153	5	23	259	4	223	4.16e-18	88.2
MS.gene29241.t1	MTR_5g044910	28.814	177	124	2	85	259	47	223	3.94e-17	85.1
MS.gene29241.t1	MTR_3g118530	30.588	170	116	2	92	259	54	223	6.14e-16	81.3
MS.gene29241.t1	MTR_3g118530	30.994	171	116	2	92	260	54	224	1.28e-15	80.1
MS.gene29241.t1	MTR_4g030040	28.177	181	126	3	88	266	121	299	1.63e-11	67.0
MS.gene29241.t1	MTR_4g030040	28.177	181	126	3	88	266	120	298	1.77e-11	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29241.t1	AT3G19940	71.138	492	140	2	19	509	21	511	0.0	734
MS.gene29241.t1	AT1G50310	70.183	493	144	3	19	509	21	512	0.0	719
MS.gene29241.t1	AT5G23270	67.335	499	160	2	1	496	1	499	0.0	684
MS.gene29241.t1	AT3G19930	65.613	506	169	3	3	505	2	505	0.0	676
MS.gene29241.t1	AT3G19930	65.613	506	169	3	3	505	2	505	0.0	676
MS.gene29241.t1	AT1G11260	62.151	502	186	3	1	499	1	501	0.0	641
MS.gene29241.t1	AT4G21480	63.599	489	176	2	10	497	10	497	0.0	617
MS.gene29241.t1	AT5G26340	57.455	503	210	3	1	500	1	502	0.0	606
MS.gene29241.t1	AT4G02050	54.457	516	226	5	1	511	1	512	0.0	573
MS.gene29241.t1	AT4G02050	54.457	516	226	5	1	511	1	512	0.0	573
MS.gene29241.t1	AT1G77210	53.861	505	223	6	1	499	1	501	0.0	550
MS.gene29241.t1	AT1G77210	53.861	505	223	6	1	499	1	501	0.0	550
MS.gene29241.t1	AT1G50310	70.752	359	103	2	153	509	11	369	0.0	538
MS.gene29241.t1	AT1G34580	51.400	500	236	3	2	496	3	500	0.0	536
MS.gene29241.t1	AT5G26250	53.183	487	222	4	13	497	12	494	0.0	528
MS.gene29241.t1	AT3G05960	51.303	499	234	5	7	500	5	499	0.0	518
MS.gene29241.t1	AT5G61520	51.653	484	227	3	17	495	18	499	8.99e-176	505
MS.gene29241.t1	AT1G07340	53.082	503	227	5	1	499	1	498	3.58e-175	503
MS.gene29241.t1	AT1G34580	51.770	452	211	3	50	496	1	450	2.85e-170	488
MS.gene29241.t1	AT5G61520	51.549	452	212	3	49	495	2	451	3.55e-160	463
MS.gene29241.t1	AT1G77210	55.014	349	153	4	153	499	6	352	1.11e-131	386
MS.gene29241.t1	AT3G18830	28.653	527	306	12	22	509	35	530	3.45e-56	196
MS.gene29241.t1	AT2G16120	29.577	497	305	10	16	490	19	492	5.92e-56	195
MS.gene29241.t1	AT4G36670	30.785	497	288	12	19	488	13	480	7.85e-55	192
MS.gene29241.t1	AT2G18480	30.737	475	278	11	37	487	36	483	3.59e-54	190
MS.gene29241.t1	AT2G16130	28.773	497	309	9	16	490	19	492	4.45e-54	190
MS.gene29241.t1	AT2G20780	29.106	481	302	10	18	488	50	501	1.64e-51	184
MS.gene29241.t1	AT5G16150	29.237	472	301	7	16	484	98	539	5.33e-50	180
MS.gene29241.t1	AT5G16150	29.237	472	301	7	16	484	98	539	5.33e-50	180
MS.gene29241.t1	AT5G16150	29.237	472	301	7	16	484	98	539	5.33e-50	180
MS.gene29241.t1	AT2G20780	30.732	410	266	8	89	488	42	443	5.71e-48	172
MS.gene29241.t1	AT2G43330	29.202	476	307	9	22	490	30	482	2.15e-46	169
MS.gene29241.t1	AT1G30220	30.383	339	211	5	20	351	25	345	2.81e-45	167
MS.gene29241.t1	AT5G59250	28.067	481	302	9	23	484	98	553	1.48e-44	165
MS.gene29241.t1	AT1G08930	27.044	477	301	10	16	484	51	488	8.81e-42	156
MS.gene29241.t1	AT1G08930	27.044	477	301	10	16	484	51	488	8.81e-42	156
MS.gene29241.t1	AT5G17010	28.298	470	296	9	31	484	55	499	1.09e-41	156
MS.gene29241.t1	AT5G17010	28.298	470	296	9	31	484	55	499	1.09e-41	156
MS.gene29241.t1	AT5G17010	28.298	470	296	9	31	484	55	499	1.09e-41	156
MS.gene29241.t1	AT1G54730	26.464	461	300	9	28	484	37	462	1.48e-41	155
MS.gene29241.t1	AT3G05155	25.895	475	315	9	13	485	17	456	2.52e-41	154
MS.gene29241.t1	AT2G35740	29.014	355	224	6	21	365	24	360	3.21e-41	156
MS.gene29241.t1	AT1G75220	26.735	490	320	7	1	488	35	487	3.49e-41	154
MS.gene29241.t1	AT1G08900	28.818	406	269	7	84	484	23	413	4.46e-41	153
MS.gene29241.t1	AT1G08900	28.818	406	269	7	84	484	57	447	9.53e-41	152
MS.gene29241.t1	AT1G08890	28.256	407	272	8	84	485	67	458	9.63e-41	153
MS.gene29241.t1	AT1G08900	28.818	406	269	7	84	484	65	455	1.36e-40	152
MS.gene29241.t1	AT1G08900	28.818	406	269	7	84	484	65	455	1.36e-40	152
MS.gene29241.t1	AT4G16480	28.969	359	221	7	20	365	24	361	3.09e-39	150
MS.gene29241.t1	AT4G16480	28.969	359	221	7	20	365	24	361	3.09e-39	150
MS.gene29241.t1	AT4G16480	28.969	359	221	7	20	365	24	361	3.09e-39	150
MS.gene29241.t1	AT5G18840	27.723	404	277	5	84	484	84	475	7.23e-39	148
MS.gene29241.t1	AT1G19450	26.752	471	309	7	23	488	49	488	8.31e-39	148
MS.gene29241.t1	AT3G03090	27.234	470	301	8	31	484	55	499	2.00e-38	147
MS.gene29241.t1	AT5G27360	26.403	481	303	11	14	484	26	465	3.43e-38	146
MS.gene29241.t1	AT3G05165	26.371	474	308	9	16	484	23	460	6.04e-38	145
MS.gene29241.t1	AT3G05165	26.371	474	308	9	16	484	23	460	6.04e-38	145
MS.gene29241.t1	AT3G05165	26.371	474	308	9	16	484	23	460	6.04e-38	145
MS.gene29241.t1	AT5G27360	26.403	481	303	11	14	484	74	513	1.04e-37	145
MS.gene29241.t1	AT2G48020	26.439	469	304	10	23	486	28	460	1.74e-37	144
MS.gene29241.t1	AT2G48020	26.439	469	304	10	23	486	28	460	1.74e-37	144
MS.gene29241.t1	AT3G05160	27.027	481	296	10	16	484	14	451	7.27e-37	142
MS.gene29241.t1	AT5G27350	25.519	482	308	9	13	484	21	461	1.67e-36	141
MS.gene29241.t1	AT3G05150	27.069	447	296	9	59	497	58	482	4.77e-36	140
MS.gene29241.t1	AT3G05150	27.146	431	287	8	59	484	58	466	7.17e-36	139
MS.gene29241.t1	AT3G05150	27.146	431	287	8	59	484	58	466	7.17e-36	139
MS.gene29241.t1	AT3G05160	28.536	403	270	7	86	484	14	402	1.23e-35	137
MS.gene29241.t1	AT3G05160	28.536	403	270	7	86	484	14	402	1.23e-35	137
MS.gene29241.t1	AT3G05400	25.210	476	317	10	13	484	16	456	1.76e-35	138
MS.gene29241.t1	AT1G08920	26.186	485	302	12	16	484	25	469	1.47e-34	135
MS.gene29241.t1	AT1G08920	25.979	485	296	12	16	484	25	462	2.18e-34	135
MS.gene29241.t1	AT1G54730	25.272	459	287	11	28	484	37	441	2.86e-34	134
MS.gene29241.t1	AT1G54730	25.776	419	272	9	28	442	37	420	3.04e-34	134
MS.gene29241.t1	AT4G04750	25.833	480	314	12	10	484	70	512	4.66e-33	132
MS.gene29241.t1	AT4G04750	25.833	480	314	12	10	484	26	468	5.24e-33	131
MS.gene29241.t1	AT4G04750	25.833	480	314	12	10	484	26	468	5.24e-33	131
MS.gene29241.t1	AT1G08900	28.261	368	244	7	84	446	65	417	7.19e-33	130
MS.gene29241.t1	AT1G54730	26.598	391	248	9	28	414	37	392	1.66e-32	129
MS.gene29241.t1	AT1G54730	26.598	391	248	9	28	414	37	392	1.66e-32	129
MS.gene29241.t1	AT4G04760	26.406	409	282	7	84	486	12	407	2.79e-32	128
MS.gene29241.t1	AT3G05165	25.333	450	297	8	16	461	23	437	5.38e-32	129
MS.gene29241.t1	AT4G04760	25.806	434	295	8	59	486	54	466	8.66e-32	128
MS.gene29241.t1	AT3G05165	26.619	417	263	10	16	426	23	402	2.37e-31	126
MS.gene29241.t1	AT3G05165	26.619	417	263	10	16	426	23	402	2.37e-31	126
MS.gene29241.t1	AT1G79820	25.630	476	304	12	18	484	53	487	7.00e-31	125
MS.gene29241.t1	AT1G79820	25.630	476	304	12	18	484	53	487	7.00e-31	125
MS.gene29241.t1	AT1G05030	24.731	465	306	11	29	484	85	514	2.11e-30	124
MS.gene29241.t1	AT5G27360	26.509	381	250	8	114	484	1	361	8.13e-30	120
MS.gene29241.t1	AT5G27360	26.509	381	250	8	114	484	1	361	8.13e-30	120
MS.gene29241.t1	AT1G08920	25.951	447	268	12	16	446	25	424	1.08e-29	121
MS.gene29241.t1	AT5G27360	26.667	405	246	11	14	408	26	389	2.70e-29	120
MS.gene29241.t1	AT1G67300	24.790	476	304	11	21	484	53	486	2.95e-29	120
MS.gene29241.t1	AT1G67300	24.790	476	304	11	21	484	53	486	2.95e-29	120
MS.gene29241.t1	AT3G05400	27.273	374	247	9	122	484	77	436	3.34e-29	120
MS.gene29241.t1	AT1G67300	25.420	476	302	13	21	484	53	487	4.88e-29	120
MS.gene29241.t1	AT1G05030	24.826	431	301	10	63	484	46	462	6.25e-29	119
MS.gene29241.t1	AT3G05155	25.000	340	223	6	13	351	17	325	7.13e-29	117
MS.gene29241.t1	AT1G54730	27.301	326	206	7	28	351	37	333	1.22e-28	116
MS.gene29241.t1	AT1G67300	24.882	422	264	10	21	431	53	432	5.22e-28	117
MS.gene29241.t1	AT1G67300	24.882	422	264	10	21	431	53	432	5.22e-28	117
MS.gene29241.t1	AT4G04760	25.424	413	278	8	84	486	71	463	5.35e-28	117
MS.gene29241.t1	AT1G67300	25.000	416	259	10	21	425	53	426	2.44e-27	114
MS.gene29241.t1	AT1G67300	25.000	416	259	10	21	425	53	426	2.44e-27	114
MS.gene29241.t1	AT1G54730	24.460	417	259	11	28	442	37	399	3.84e-27	114
MS.gene29241.t1	AT1G79820	25.355	422	266	11	18	431	53	433	4.60e-26	111
MS.gene29241.t1	AT2G48020	27.507	349	217	8	23	369	28	342	8.34e-26	109
MS.gene29241.t1	AT1G54730	26.333	300	193	6	28	325	37	310	1.51e-25	107
MS.gene29241.t1	AT1G54730	26.333	300	193	6	28	325	37	310	1.51e-25	107
MS.gene29241.t1	AT1G54730	25.193	389	235	11	28	414	37	371	1.90e-25	108
MS.gene29241.t1	AT2G48020	27.492	331	209	7	23	351	28	329	2.16e-25	107
MS.gene29241.t1	AT5G17010	25.265	471	249	14	31	484	52	436	7.66e-23	101
MS.gene29241.t1	AT3G51490	28.870	239	149	5	23	259	4	223	1.82e-22	101
MS.gene29241.t1	AT3G51490	28.870	239	149	5	23	259	4	223	2.14e-22	101
MS.gene29241.t1	AT3G20460	20.723	415	291	7	84	484	93	483	1.05e-21	98.6
MS.gene29241.t1	AT3G51490	34.104	173	111	3	89	259	2	173	1.42e-21	99.0
MS.gene29241.t1	AT1G79820	23.739	476	265	10	18	484	53	439	2.46e-21	97.1
MS.gene29241.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.28e-17	86.7
MS.gene29241.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.28e-17	86.7
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	2.87e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.15e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.15e-17	85.5
MS.gene29241.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.15e-17	85.5
MS.gene29241.t1	AT1G79820	24.363	353	200	7	137	484	87	377	4.19e-15	77.4

Find 93 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGATTTGTAGGTTATTAT+TGG	0.155816	1.1:+23174328	MS.gene29241:intron
CTTATTGGTGCAATACTAAA+TGG	0.189051	1.1:+23173366	MS.gene29241:CDS
CCTCTTTCAATCAAGGAATT+TGG	0.206066	1.1:-23173805	None:intergenic
ATAATTGGTCGTCTACTTCT+AGG	0.240972	1.1:+23173414	MS.gene29241:CDS
CGCAAGGCCTCGATGTTTCT+TGG	0.247718	1.1:+23173330	MS.gene29241:CDS
GGTTATGATCTTGGTATTAC+TGG	0.252498	1.1:+23173114	MS.gene29241:CDS
ATCTTAATTGCGTTAAAGTT+TGG	0.266196	1.1:+23174352	MS.gene29241:CDS
TGTGGAAGTCACATTGGTTT+TGG	0.299321	1.1:+23174713	MS.gene29241:CDS
AACGTTGAAATGCTAATAAT+TGG	0.313941	1.1:+23173399	MS.gene29241:CDS
GCTGCAAATCTGATCAATTA+TGG	0.314068	1.1:+23173685	MS.gene29241:CDS
ATGCTTTGTCACTTGAAGTT+TGG	0.316796	1.1:+23174589	MS.gene29241:CDS
CTATCAATGCTGCAAGGTAT+AGG	0.318723	1.1:-23173269	None:intergenic
CTCACAAATGTTTATTTGTC+AGG	0.326178	1.1:+23174194	MS.gene29241:CDS
TGATGGCGGTAATAACAAAA+AGG	0.342645	1.1:+23174762	MS.gene29241:CDS
TGGAGAGTCTCTTTAGGTCT+TGG	0.342760	1.1:+23173730	MS.gene29241:CDS
CCGTTCTTTCAACAACTTAC+CGG	0.343743	1.1:+23174000	MS.gene29241:CDS
CATTTAGTATTGCACCAATA+AGG	0.345996	1.1:-23173365	None:intergenic
TTCCAATTGAAGAGATGAAC+AGG	0.346551	1.1:+23174689	MS.gene29241:CDS
GGTCGTCTACTTCTAGGATT+TGG	0.352688	1.1:+23173420	MS.gene29241:CDS
GTGAGTTGAGGTCTATATTC+TGG	0.366782	1.1:-23173961	None:intergenic
TACCAATTGTAATCATCATT+TGG	0.367727	1.1:-23173657	None:intergenic
TGCATGGTCATGGGGACCAT+TGG	0.368282	1.1:+23174453	MS.gene29241:CDS
TAAAAGCACAGCAATGAAAA+TGG	0.373149	1.1:-23174650	None:intergenic
CTCATGTCTGCGGTTATTAG+TGG	0.373226	1.1:+23174090	MS.gene29241:CDS
ACCCTGTTCATCTCTTCAAT+TGG	0.378708	1.1:-23174691	None:intergenic
CAAATCCTAAGATCTTAAAA+AGG	0.389887	1.1:-23174053	None:intergenic
GCATGGTCATGGGGACCATT+GGG	0.397039	1.1:+23174454	MS.gene29241:CDS
AATGGATGGAGAGTCTCTTT+AGG	0.398416	1.1:+23173724	MS.gene29241:CDS
GAGAAGGTCGGCTTCGCCTT+TGG	0.399112	1.1:-23174398	None:intergenic
TATCAATGCTGCAAGGTATA+GGG	0.407532	1.1:-23173268	None:intergenic
GTTCCAGATCACGTTGTTGA+TGG	0.407596	1.1:+23174745	MS.gene29241:CDS
CCAAATTCCTTGATTGAAAG+AGG	0.416577	1.1:+23173805	MS.gene29241:CDS
AAACATGTCATTAACACATA+TGG	0.418399	1.1:-23173063	None:intergenic
ACCGGTCTATTTGTCTGAAA+TGG	0.422459	1.1:+23173597	MS.gene29241:CDS
CCTAGGCACAAAAGAATTGC+TGG	0.422557	1.1:-23173760	None:intergenic
ATGGTTGCCTCTTTCAATCA+AGG	0.423463	1.1:-23173812	None:intergenic
ATGGGGACCATTGGGTTGGT+TGG	0.435113	1.1:+23174462	MS.gene29241:CDS
CCGCCATCAACAACGTGATC+TGG	0.436846	1.1:-23174748	None:intergenic
TTCCAAATGATGATTACAAT+TGG	0.443048	1.1:+23173655	MS.gene29241:CDS
GTATTCACAGTAGACAAATT+CGG	0.450247	1.1:+23174144	MS.gene29241:CDS
GCTCTTGAGGTTCGACCAGC+AGG	0.464142	1.1:+23174502	MS.gene29241:CDS
ACATTTATAGCTTGACCTGC+TGG	0.465665	1.1:-23174517	None:intergenic
AAGCAAAGGCAATGTTGAAA+AGG	0.468116	1.1:+23173839	MS.gene29241:CDS
TCAAGTGACAAAGCATGGTT+AGG	0.470864	1.1:-23174582	None:intergenic
GCGTTAAAGTTTGGATTGAC+CGG	0.474008	1.1:+23174361	MS.gene29241:CDS
GGTCATGGGGACCATTGGGT+TGG	0.474383	1.1:+23174458	MS.gene29241:CDS
AAAGGAATCAACATGGGAGC+TGG	0.490766	1.1:+23172991	None:intergenic
TACTGGAGGAGTGACTTCTA+TGG	0.491588	1.1:+23173131	MS.gene29241:CDS
TCTAATTAAACAGTCGGTAC+CGG	0.491707	1.1:+23173579	MS.gene29241:intron
TTCCACAATCACAAGAATGA+TGG	0.497068	1.1:+23173305	MS.gene29241:CDS
GGTTGAGTAATGTTCTTCCA+TGG	0.497635	1.1:-23173940	None:intergenic
CTTGATCAAATTCTTTCCAC+GGG	0.503864	1.1:+23173161	MS.gene29241:CDS
TTTGGTAAATGATCCTTGTC+CGG	0.508363	1.1:-23174380	None:intergenic
AAGTTTGGATTGACCGGACA+AGG	0.511106	1.1:+23174367	MS.gene29241:CDS
TTGCAGCATTTGCATGGTCA+TGG	0.516680	1.1:+23174443	MS.gene29241:CDS
AAGGCCTCGATGTTTCTTGG+TGG	0.522913	1.1:+23173333	MS.gene29241:CDS
TCTTGATCAAATTCTTTCCA+CGG	0.523231	1.1:+23173160	MS.gene29241:CDS
TGCAGCATTTGCATGGTCAT+GGG	0.527465	1.1:+23174444	MS.gene29241:CDS
CTACTTCTAGGATTTGGTGT+GGG	0.532326	1.1:+23173426	MS.gene29241:CDS
TTGAAGAGATGAACAGGGTG+TGG	0.533503	1.1:+23174695	MS.gene29241:CDS
ATTAGAGGAGCACTTAACAT+TGG	0.539318	1.1:+23173631	MS.gene29241:CDS
CACTAATAACCGCAGACATG+AGG	0.542056	1.1:-23174089	None:intergenic
TCCCATCATTCTTGTGATTG+TGG	0.543740	1.1:-23173307	None:intergenic
AAACATGATAACATTAATGC+CGG	0.548089	1.1:-23174019	None:intergenic
CTAGCAAGGTGGAACATCCA+TGG	0.554803	1.1:+23173923	MS.gene29241:CDS
GGAGCTTTCGTTGAGACGAG+TGG	0.569051	1.1:+23173012	MS.gene29241:CDS
CCGGTAAGTTGTTGAAAGAA+CGG	0.569106	1.1:-23174000	None:intergenic
CACAAGAATGATGGGACGCA+AGG	0.577104	1.1:+23173314	MS.gene29241:CDS
CACAAATAAAGAACAAGAGA+AGG	0.579551	1.1:-23174414	None:intergenic
TCCACAATCACAAGAATGAT+GGG	0.581040	1.1:+23173306	MS.gene29241:CDS
GCCATTTCAGACAAATAGAC+CGG	0.586043	1.1:-23173598	None:intergenic
GCAGCATTTGCATGGTCATG+GGG	0.596220	1.1:+23174445	MS.gene29241:CDS
ACTAATAACCGCAGACATGA+GGG	0.599477	1.1:-23174088	None:intergenic
ACAGGGTGTGGAAGTCACAT+TGG	0.599976	1.1:+23174707	MS.gene29241:CDS
TATGATCTTGGTATTACTGG+AGG	0.600534	1.1:+23173117	MS.gene29241:CDS
CATATGTTGCAGCATTTGCA+TGG	0.602476	1.1:+23174437	MS.gene29241:CDS
TAGTGAAATATGCGCTCTTG+AGG	0.603995	1.1:+23174489	MS.gene29241:CDS
AAACTTCAAGTGACAAAGCA+TGG	0.605901	1.1:-23174587	None:intergenic
TGCTAGTGAAGAAGCTAGCA+AGG	0.606666	1.1:+23173909	MS.gene29241:CDS
TCTACTTCTAGGATTTGGTG+TGG	0.607831	1.1:+23173425	MS.gene29241:CDS
CCAGATCACGTTGTTGATGG+CGG	0.611820	1.1:+23174748	MS.gene29241:CDS
TCAAGAGCGCATATTTCACT+AGG	0.619701	1.1:-23174487	None:intergenic
CGATGCTTCCCTCATGTCTG+CGG	0.626852	1.1:+23174080	MS.gene29241:CDS
AATAAAGAACAAGAGAAGGT+CGG	0.627160	1.1:-23174410	None:intergenic
ATGTCTGCGGTTATTAGTGG+TGG	0.637338	1.1:+23174093	MS.gene29241:CDS
CTAGGCACCAACCAACCCAA+TGG	0.653417	1.1:-23174469	None:intergenic
AAGAAGCTATCAATGCTGCA+AGG	0.663331	1.1:-23173275	None:intergenic
AAACTGACAAAAGTGAGTTG+AGG	0.670728	1.1:-23173973	None:intergenic
GGACAAGGATCATTTACCAA+AGG	0.684431	1.1:+23174382	MS.gene29241:CDS
GCAATGTTGAAAAGGATCCG+CGG	0.695814	1.1:+23173847	MS.gene29241:CDS
TCCAATTGAAGAGATGAACA+GGG	0.720479	1.1:+23174690	MS.gene29241:CDS
TAAGCCACCAAGAAACATCG+AGG	0.754385	1.1:-23173337	None:intergenic
TAGTGAAGAAGCTAGCAAGG+TGG	0.764545	1.1:+23173912	MS.gene29241:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAATTAATCTATGATTTGT+AGG	+	chr1.1:23174318-23174337	MS.gene29241:intron	15.0%
!!	AGTGGAATAAAAAATTATGA+GGG	+	chr1.1:23173030-23173049	MS.gene29241:CDS	20.0%
!!	TAAACTAATAGAAATTAGAG+AGG	-	chr1.1:23173473-23173492	None:intergenic	20.0%
!!!	AAGAAGATTTTTATTTCTTG+AGG	+	chr1.1:23174167-23174186	MS.gene29241:CDS	20.0%
!!!	AGAAGATTTTTATTTCTTGA+GGG	+	chr1.1:23174168-23174187	MS.gene29241:CDS	20.0%
!!!	ATATTCTTCATCAACATTTT+CGG	-	chr1.1:23173875-23173894	None:intergenic	20.0%
!!!	CTATTTTCTAATTAAACAGT+CGG	+	chr1.1:23173573-23173592	MS.gene29241:intron	20.0%
!!!	TATGATTTGTAGGTTATTAT+TGG	+	chr1.1:23174328-23174347	MS.gene29241:intron	20.0%
!	AAACATGATAACATTAATGC+CGG	-	chr1.1:23174022-23174041	None:intergenic	25.0%
!	AAACATGTCATTAACACATA+TGG	-	chr1.1:23173066-23173085	None:intergenic	25.0%
!	AACGTTGAAATGCTAATAAT+TGG	+	chr1.1:23173399-23173418	MS.gene29241:CDS	25.0%
!	ATCTTAATTGCGTTAAAGTT+TGG	+	chr1.1:23174352-23174371	MS.gene29241:CDS	25.0%
!	CAAATCCTAAGATCTTAAAA+AGG	-	chr1.1:23174056-23174075	None:intergenic	25.0%
!	GAGTGGAATAAAAAATTATG+AGG	+	chr1.1:23173029-23173048	MS.gene29241:CDS	25.0%
!	TACCAATTGTAATCATCATT+TGG	-	chr1.1:23173660-23173679	None:intergenic	25.0%
!	TTCCAAATGATGATTACAAT+TGG	+	chr1.1:23173655-23173674	MS.gene29241:CDS	25.0%
!!!	CTTTTTAAGATCTTAGGATT+TGG	+	chr1.1:23174054-23174073	MS.gene29241:CDS	25.0%
	AACCAGCAAAGAAAAAGAAA+AGG	-	chr1.1:23174615-23174634	None:intergenic	30.0%
	AATAAAGAACAAGAGAAGGT+CGG	-	chr1.1:23174413-23174432	None:intergenic	30.0%
	CACAAATAAAGAACAAGAGA+AGG	-	chr1.1:23174417-23174436	None:intergenic	30.0%
	CATTTAGTATTGCACCAATA+AGG	-	chr1.1:23173368-23173387	None:intergenic	30.0%
	CTCACAAATGTTTATTTGTC+AGG	+	chr1.1:23174194-23174213	MS.gene29241:CDS	30.0%
	CTTATTGGTGCAATACTAAA+TGG	+	chr1.1:23173366-23173385	MS.gene29241:CDS	30.0%
	GTATTCACAGTAGACAAATT+CGG	+	chr1.1:23174144-23174163	MS.gene29241:CDS	30.0%
	TCTTGATCAAATTCTTTCCA+CGG	+	chr1.1:23173160-23173179	MS.gene29241:CDS	30.0%
	TGGTGTTTCACCTAAAAAAA+GGG	-	chr1.1:23173788-23173807	None:intergenic	30.0%
!	CTCTTCAATTGGAACATTTT+TGG	-	chr1.1:23174683-23174702	None:intergenic	30.0%
!	TAAAAGCACAGCAATGAAAA+TGG	-	chr1.1:23174653-23174672	None:intergenic	30.0%
!	TTGGTGTTTCACCTAAAAAA+AGG	-	chr1.1:23173789-23173808	None:intergenic	30.0%
!!	AGATTTTTATTTCTTGAGGG+TGG	+	chr1.1:23174171-23174190	MS.gene29241:CDS	30.0%
!!!	AATTGGAACATTTTTGGTCT+CGG	-	chr1.1:23174677-23174696	None:intergenic	30.0%
	AAACTGACAAAAGTGAGTTG+AGG	-	chr1.1:23173976-23173995	None:intergenic	35.0%
	AAACTTCAAGTGACAAAGCA+TGG	-	chr1.1:23174590-23174609	None:intergenic	35.0%
	AAGCAAAGGCAATGTTGAAA+AGG	+	chr1.1:23173839-23173858	MS.gene29241:CDS	35.0%
	ATAATTGGTCGTCTACTTCT+AGG	+	chr1.1:23173414-23173433	MS.gene29241:CDS	35.0%
	CCAAATTCCTTGATTGAAAG+AGG	+	chr1.1:23173805-23173824	MS.gene29241:CDS	35.0%
	CCTAAGATCTTAAAAAGGAC+AGG	-	chr1.1:23174051-23174070	None:intergenic	35.0%
	CCTCTTTCAATCAAGGAATT+TGG	-	chr1.1:23173808-23173827	None:intergenic	35.0%
	CTTCCAAGCATAAAAATGGA+TGG	+	chr1.1:23173710-23173729	MS.gene29241:CDS	35.0%
	CTTGATCAAATTCTTTCCAC+GGG	+	chr1.1:23173161-23173180	MS.gene29241:CDS	35.0%
	GCTGCAAATCTGATCAATTA+TGG	+	chr1.1:23173685-23173704	MS.gene29241:CDS	35.0%
	GGTACTTCCAAGCATAAAAA+TGG	+	chr1.1:23173706-23173725	MS.gene29241:CDS	35.0%
	GGTTATGATCTTGGTATTAC+TGG	+	chr1.1:23173114-23173133	MS.gene29241:CDS	35.0%
	TATCAATGCTGCAAGGTATA+GGG	-	chr1.1:23173271-23173290	None:intergenic	35.0%
	TATGATCTTGGTATTACTGG+AGG	+	chr1.1:23173117-23173136	MS.gene29241:CDS	35.0%
	TATGTGTGTCTTCGTTTGTA+TGG	+	chr1.1:23174276-23174295	MS.gene29241:intron	35.0%
	TCCAATTGAAGAGATGAACA+GGG	+	chr1.1:23174690-23174709	MS.gene29241:CDS	35.0%
	TCCACAATCACAAGAATGAT+GGG	+	chr1.1:23173306-23173325	MS.gene29241:CDS	35.0%
	TCTAATTAAACAGTCGGTAC+CGG	+	chr1.1:23173579-23173598	MS.gene29241:intron	35.0%
	TTCCAATTGAAGAGATGAAC+AGG	+	chr1.1:23174689-23174708	MS.gene29241:CDS	35.0%
	TTCCACAATCACAAGAATGA+TGG	+	chr1.1:23173305-23173324	MS.gene29241:CDS	35.0%
	TTTGGTAAATGATCCTTGTC+CGG	-	chr1.1:23174383-23174402	None:intergenic	35.0%
!	ACATGTTTTGTAGCTGCAAT+GGG	+	chr1.1:23173078-23173097	MS.gene29241:CDS	35.0%
!	ATGCTTTGTCACTTGAAGTT+TGG	+	chr1.1:23174589-23174608	MS.gene29241:CDS	35.0%
!	CTTCTTTTCGGTTATGATCT+TGG	+	chr1.1:23173105-23173124	MS.gene29241:CDS	35.0%
!	TTCATTTTCTTATACACCCG+TGG	-	chr1.1:23173180-23173199	None:intergenic	35.0%
!!	ATTAGAGGAGCACTTAACAT+TGG	+	chr1.1:23173631-23173650	MS.gene29241:CDS	35.0%
!!	GGTGGCTTATTTTTCCTTAT+TGG	+	chr1.1:23173351-23173370	MS.gene29241:CDS	35.0%
!!	TCTCCATCCATTTTTATGCT+TGG	-	chr1.1:23173716-23173735	None:intergenic	35.0%
!!	TGATGGCGGTAATAACAAAA+AGG	+	chr1.1:23174762-23174781	MS.gene29241:CDS	35.0%
!!!	ACATTGCCTTTGCTTTTTCA+TGG	-	chr1.1:23173834-23173853	None:intergenic	35.0%
!!!	ATTGGAACATTTTTGGTCTC+GGG	-	chr1.1:23174676-23174695	None:intergenic	35.0%
!!!	CCTGTCCTTTTTAAGATCTT+AGG	+	chr1.1:23174048-23174067	MS.gene29241:CDS	35.0%
!!!	CTTTTTCTTTGCTGGTTTTG+TGG	+	chr1.1:23174618-23174637	MS.gene29241:CDS	35.0%
	AAGAAGCTATCAATGCTGCA+AGG	-	chr1.1:23173278-23173297	None:intergenic	40.0%
	AATGGATGGAGAGTCTCTTT+AGG	+	chr1.1:23173724-23173743	MS.gene29241:CDS	40.0%
	ACATTTATAGCTTGACCTGC+TGG	-	chr1.1:23174520-23174539	None:intergenic	40.0%
	ACCCTGTTCATCTCTTCAAT+TGG	-	chr1.1:23174694-23174713	None:intergenic	40.0%
	ACCGGTCTATTTGTCTGAAA+TGG	+	chr1.1:23173597-23173616	MS.gene29241:CDS	40.0%
	ACTAATAACCGCAGACATGA+GGG	-	chr1.1:23174091-23174110	None:intergenic	40.0%
	AGGCAACCATGAAAAAGCAA+AGG	+	chr1.1:23173825-23173844	MS.gene29241:CDS	40.0%
	ATGGCTCCAGCAAAAATTAG+AGG	+	chr1.1:23173616-23173635	MS.gene29241:CDS	40.0%
	ATGGTTGCCTCTTTCAATCA+AGG	-	chr1.1:23173815-23173834	None:intergenic	40.0%
	CACCTAAAAAAAGGGATCCT+AGG	-	chr1.1:23173780-23173799	None:intergenic	40.0%
	CATATGTTGCAGCATTTGCA+TGG	+	chr1.1:23174437-23174456	MS.gene29241:CDS	40.0%
	CCGGTAAGTTGTTGAAAGAA+CGG	-	chr1.1:23174003-23174022	None:intergenic	40.0%
	CCGTTCTTTCAACAACTTAC+CGG	+	chr1.1:23174000-23174019	MS.gene29241:CDS	40.0%
	CTATCAATGCTGCAAGGTAT+AGG	-	chr1.1:23173272-23173291	None:intergenic	40.0%
	GCCATTTCAGACAAATAGAC+CGG	-	chr1.1:23173601-23173620	None:intergenic	40.0%
	GCGTTAAAGTTTGGATTGAC+CGG	+	chr1.1:23174361-23174380	MS.gene29241:CDS	40.0%
	GGACAAGGATCATTTACCAA+AGG	+	chr1.1:23174382-23174401	MS.gene29241:CDS	40.0%
	GGTTGAGTAATGTTCTTCCA+TGG	-	chr1.1:23173943-23173962	None:intergenic	40.0%
	TAGTGAAATATGCGCTCTTG+AGG	+	chr1.1:23174489-23174508	MS.gene29241:CDS	40.0%
	TCAAGTGACAAAGCATGGTT+AGG	-	chr1.1:23174585-23174604	None:intergenic	40.0%
	TCCCATCATTCTTGTGATTG+TGG	-	chr1.1:23173310-23173329	None:intergenic	40.0%
!	AGTGCTCCTCTAATTTTTGC+TGG	-	chr1.1:23173625-23173644	None:intergenic	40.0%
!	GACATGTTTTGTAGCTGCAA+TGG	+	chr1.1:23173077-23173096	MS.gene29241:CDS	40.0%
!	GGCCTTTTCTTTTTCTTTGC+TGG	+	chr1.1:23174610-23174629	MS.gene29241:CDS	40.0%
!	GTGAGTTGAGGTCTATATTC+TGG	-	chr1.1:23173964-23173983	None:intergenic	40.0%
!	TCAAGAGCGCATATTTCACT+AGG	-	chr1.1:23174490-23174509	None:intergenic	40.0%
!!	CTACTTCTAGGATTTGGTGT+GGG	+	chr1.1:23173426-23173445	MS.gene29241:CDS	40.0%
!!	TCTACTTCTAGGATTTGGTG+TGG	+	chr1.1:23173425-23173444	MS.gene29241:CDS	40.0%
!!!	TGCCTAGGATCCCTTTTTTT+AGG	+	chr1.1:23173775-23173794	MS.gene29241:CDS	40.0%
!!!	TGTGGAAGTCACATTGGTTT+TGG	+	chr1.1:23174713-23174732	MS.gene29241:CDS	40.0%
	AAGTTTGGATTGACCGGACA+AGG	+	chr1.1:23174367-23174386	MS.gene29241:CDS	45.0%
	ATGTCTGCGGTTATTAGTGG+TGG	+	chr1.1:23174093-23174112	MS.gene29241:CDS	45.0%
	CACTAATAACCGCAGACATG+AGG	-	chr1.1:23174092-23174111	None:intergenic	45.0%
	CCTAGGCACAAAAGAATTGC+TGG	-	chr1.1:23173763-23173782	None:intergenic	45.0%
	CTCATGTCTGCGGTTATTAG+TGG	+	chr1.1:23174090-23174109	MS.gene29241:CDS	45.0%
	GCAATGTTGAAAAGGATCCG+CGG	+	chr1.1:23173847-23173866	MS.gene29241:CDS	45.0%
	GTTCCAGATCACGTTGTTGA+TGG	+	chr1.1:23174745-23174764	MS.gene29241:CDS	45.0%
	TAAGCCACCAAGAAACATCG+AGG	-	chr1.1:23173340-23173359	None:intergenic	45.0%
	TACTGGAGGAGTGACTTCTA+TGG	+	chr1.1:23173131-23173150	MS.gene29241:CDS	45.0%
	TAGTGAAGAAGCTAGCAAGG+TGG	+	chr1.1:23173912-23173931	MS.gene29241:CDS	45.0%
	TGCAGCATTTGCATGGTCAT+GGG	+	chr1.1:23174444-23174463	MS.gene29241:CDS	45.0%
	TGCTAGTGAAGAAGCTAGCA+AGG	+	chr1.1:23173909-23173928	MS.gene29241:CDS	45.0%
	TGGAGAGTCTCTTTAGGTCT+TGG	+	chr1.1:23173730-23173749	MS.gene29241:CDS	45.0%
	TTGAAGAGATGAACAGGGTG+TGG	+	chr1.1:23174695-23174714	MS.gene29241:CDS	45.0%
	TTGCAGCATTTGCATGGTCA+TGG	+	chr1.1:23174443-23174462	MS.gene29241:CDS	45.0%
!	CATCAACATTTTCGGTTCCG+CGG	-	chr1.1:23173867-23173886	None:intergenic	45.0%
!	CCAGCAATTCTTTTGTGCCT+AGG	+	chr1.1:23173760-23173779	MS.gene29241:CDS	45.0%
!	GCAATGGGAGGTCTTCTTTT+CGG	+	chr1.1:23173093-23173112	MS.gene29241:CDS	45.0%
!	TGGTGTGGGATTTTGCAATC+AGG	+	chr1.1:23173440-23173459	MS.gene29241:CDS	45.0%
!	TGTTTTGTAGCTGCAATGGG+AGG	+	chr1.1:23173081-23173100	MS.gene29241:CDS	45.0%
!!	GGTCGTCTACTTCTAGGATT+TGG	+	chr1.1:23173420-23173439	MS.gene29241:CDS	45.0%
	AAGGCCTCGATGTTTCTTGG+TGG	+	chr1.1:23173333-23173352	MS.gene29241:CDS	50.0%
	ACAGGGTGTGGAAGTCACAT+TGG	+	chr1.1:23174707-23174726	MS.gene29241:CDS	50.0%
	CTAGCAAGGTGGAACATCCA+TGG	+	chr1.1:23173923-23173942	MS.gene29241:CDS	50.0%
	GCAGCATTTGCATGGTCATG+GGG	+	chr1.1:23174445-23174464	MS.gene29241:CDS	50.0%
!	CACAAGAATGATGGGACGCA+AGG	+	chr1.1:23173314-23173333	MS.gene29241:CDS	50.0%
!	CCAGATCACGTTGTTGATGG+CGG	+	chr1.1:23174748-23174767	MS.gene29241:CDS	50.0%
	CCGCCATCAACAACGTGATC+TGG	-	chr1.1:23174751-23174770	None:intergenic	55.0%
	CGATGCTTCCCTCATGTCTG+CGG	+	chr1.1:23174080-23174099	MS.gene29241:CDS	55.0%
	CGCAAGGCCTCGATGTTTCT+TGG	+	chr1.1:23173330-23173349	MS.gene29241:CDS	55.0%
	CTAGGCACCAACCAACCCAA+TGG	-	chr1.1:23174472-23174491	None:intergenic	55.0%
	GCATGGTCATGGGGACCATT+GGG	+	chr1.1:23174454-23174473	MS.gene29241:CDS	55.0%
	GGAGCTTTCGTTGAGACGAG+TGG	+	chr1.1:23173012-23173031	MS.gene29241:CDS	55.0%
	TGCATGGTCATGGGGACCAT+TGG	+	chr1.1:23174453-23174472	MS.gene29241:CDS	55.0%
!!	ATGGGGACCATTGGGTTGGT+TGG	+	chr1.1:23174462-23174481	MS.gene29241:CDS	55.0%
	GCTCTTGAGGTTCGACCAGC+AGG	+	chr1.1:23174502-23174521	MS.gene29241:CDS	60.0%
	GGTCATGGGGACCATTGGGT+TGG	+	chr1.1:23174458-23174477	MS.gene29241:CDS	60.0%
!	GAGAAGGTCGGCTTCGCCTT+TGG	-	chr1.1:23174401-23174420	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	23173003	23174795	23173003	ID=MS.gene29241
chr1.1	mRNA	23173003	23174795	23173003	ID=MS.gene29241.t1;Parent=MS.gene29241
chr1.1	exon	23173003	23173461	23173003	ID=MS.gene29241.t1.exon1;Parent=MS.gene29241.t1
chr1.1	CDS	23173003	23173461	23173003	ID=cds.MS.gene29241.t1;Parent=MS.gene29241.t1
chr1.1	exon	23173592	23174215	23173592	ID=MS.gene29241.t1.exon2;Parent=MS.gene29241.t1
chr1.1	CDS	23173592	23174215	23173592	ID=cds.MS.gene29241.t1;Parent=MS.gene29241.t1
chr1.1	exon	23174340	23174795	23174340	ID=MS.gene29241.t1.exon3;Parent=MS.gene29241.t1
chr1.1	CDS	23174340	23174795	23174340	ID=cds.MS.gene29241.t1;Parent=MS.gene29241.t1

Gene Sequence

>MS.gene29241

ATGGGAGCTGGAGCTTTCGTTGAGACGAGTGGAATAAAAAATTATGAGGGAAGAGTGACTCCATATGTGTTAATGACATGTTTTGTAGCTGCAATGGGAGGTCTTCTTTTCGGTTATGATCTTGGTATTACTGGAGGAGTGACTTCTATGGATGAATTCTTGATCAAATTCTTTCCACGGGTGTATAAGAAAATGAATGATGAAACACATAATACAAGTCAATATTGCAAATTTGATGATCAAATTTTAACACTATTCACATCTTCCCTATACCTTGCAGCATTGATAGCTTCTTTCTTTGCTTCCACAATCACAAGAATGATGGGACGCAAGGCCTCGATGTTTCTTGGTGGCTTATTTTTCCTTATTGGTGCAATACTAAATGGATTAGCAGCTAACGTTGAAATGCTAATAATTGGTCGTCTACTTCTAGGATTTGGTGTGGGATTTTGCAATCAGGTAAGAGTCCTCTCTAATTTCTATTAGTTTAAGTTGTATATATTTAATAAAATTTCTTAATATTGTGAAAAACAAAATCATATCTAATTAACTAATTTTTGTCATTGTTATCTATTTTCTAATTAAACAGTCGGTACCGGTCTATTTGTCTGAAATGGCTCCAGCAAAAATTAGAGGAGCACTTAACATTGGCTTCCAAATGATGATTACAATTGGTATTCTTGCTGCAAATCTGATCAATTATGGTACTTCCAAGCATAAAAATGGATGGAGAGTCTCTTTAGGTCTTGGAGCAGTGCCAGCAATTCTTTTGTGCCTAGGATCCCTTTTTTTAGGTGAAACACCAAATTCCTTGATTGAAAGAGGCAACCATGAAAAAGCAAAGGCAATGTTGAAAAGGATCCGCGGAACCGAAAATGTTGATGAAGAATATCAAGATCTTGTTGATGCTAGTGAAGAAGCTAGCAAGGTGGAACATCCATGGAAGAACATTACTCAACCAGAATATAGACCTCAACTCACTTTTGTCAGTTTTATTCCGTTCTTTCAACAACTTACCGGCATTAATGTTATCATGTTTTACGCTCCTGTCCTTTTTAAGATCTTAGGATTTGGTGACGATGCTTCCCTCATGTCTGCGGTTATTAGTGGTGGTGTCAATGTTGTTGCTACACTTGTTTCTGTATTCACAGTAGACAAATTCGGAAGAAGATTTTTATTTCTTGAGGGTGGCTCACAAATGTTTATTTGTCAGGTAAAAATTGTCACATTTATTTCTTTTAGATTTTGATACATAAAGCTAATGTTAAACATATATGTGTGTCTTCGTTTGTATGGAGTTATTCATGTACAAACTATAATTAATCTATGATTTGTAGGTTATTATTGGAATCTTAATTGCGTTAAAGTTTGGATTGACCGGACAAGGATCATTTACCAAAGGCGAAGCCGACCTTCTCTTGTTCTTTATTTGTGCATATGTTGCAGCATTTGCATGGTCATGGGGACCATTGGGTTGGTTGGTGCCTAGTGAAATATGCGCTCTTGAGGTTCGACCAGCAGGTCAAGCTATAAATGTTGCAGTGAACATGTTCTTCACATTTATGATTGCTCAAGTCTTCCTAACCATGCTTTGTCACTTGAAGTTTGGCCTTTTCTTTTTCTTTGCTGGTTTTGTGGCAATCATGACCATTTTCATTGCTGTGCTTTTACCCGAGACCAAAAATGTTCCAATTGAAGAGATGAACAGGGTGTGGAAGTCACATTGGTTTTGGACAAAGTATGTTCCAGATCACGTTGTTGATGGCGGTAATAACAAAAAGGTTGATCCTTGA

Protein sequence

>MS.gene29241.t1

MGAGAFVETSGIKNYEGRVTPYVLMTCFVAAMGGLLFGYDLGITGGVTSMDEFLIKFFPRVYKKMNDETHNTSQYCKFDDQILTLFTSSLYLAALIASFFASTITRMMGRKASMFLGGLFFLIGAILNGLAANVEMLIIGRLLLGFGVGFCNQSVPVYLSEMAPAKIRGALNIGFQMMITIGILAANLINYGTSKHKNGWRVSLGLGAVPAILLCLGSLFLGETPNSLIERGNHEKAKAMLKRIRGTENVDEEYQDLVDASEEASKVEHPWKNITQPEYRPQLTFVSFIPFFQQLTGINVIMFYAPVLFKILGFGDDASLMSAVISGGVNVVATLVSVFTVDKFGRRFLFLEGGSQMFICQVIIGILIALKFGLTGQGSFTKGEADLLLFFICAYVAAFAWSWGPLGWLVPSEICALEVRPAGQAINVAVNMFFTFMIAQVFLTMLCHLKFGLFFFFAGFVAIMTIFIAVLLPETKNVPIEEMNRVWKSHWFWTKYVPDHVVDGGNNKKVDP