AlfalfaGEDB | MS.gene88586

M. sativa cultivar XinJiangDaYe / MS.gene88586

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88586.t1	XP_003589734.2	97.1	512	15	0	1	512	1	512	3.20E-285	990.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88586.t1	Q9LT15	71.2	510	143	3	1	507	1	509	2.1e-208	726.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88586.t1	G7IBF1	97.1	512	15	0	1	512	1	512	2.3e-285	990.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene25807	MS.gene88586	PPI
MS.gene88586	MS.gene66840	PPI
MS.gene021157	MS.gene88586	PPI
MS.gene88586	MS.gene52719	PPI
MS.gene88586	MS.gene88585	PPI
MS.gene88586	MS.gene30558	PPI
MS.gene42509	MS.gene88586	PPI
MS.gene026189	MS.gene88586	PPI
MS.gene88586	MS.gene003775	PPI
MS.gene47969	MS.gene88586	PPI
MS.gene006547	MS.gene88586	PPI
MS.gene041500	MS.gene88586	PPI
MS.gene88586	MS.gene78328	PPI
MS.gene88586	MS.gene29303	PPI
MS.gene88586	MS.gene24272	PPI
MS.gene88586	MS.gene004000	PPI
MS.gene88586	MS.gene020721	PPI
MS.gene88586	MS.gene068492	PPI
MS.gene88586	MS.gene069970	PPI
MS.gene036548	MS.gene88586	PPI
MS.gene88586	MS.gene044198	PPI
MS.gene065882	MS.gene88586	PPI
MS.gene88586	MS.gene018043	PPI
MS.gene91109	MS.gene88586	PPI
MS.gene018060	MS.gene88586	PPI
MS.gene88586	MS.gene014297	PPI
MS.gene88586	MS.gene58760	PPI
MS.gene63888	MS.gene88586	PPI
MS.gene002806	MS.gene88586	PPI
MS.gene88586	MS.gene78842	PPI
MS.gene88586	MS.gene036638	PPI
MS.gene88586	MS.gene27999	PPI
MS.gene81380	MS.gene88586	PPI
MS.gene88586	MS.gene32215	PPI
MS.gene058372	MS.gene88586	PPI
MS.gene88586	MS.gene003641	PPI
MS.gene88586	MS.gene29239	PPI
MS.gene29304	MS.gene88586	PPI
MS.gene88586	MS.gene073258	PPI
MS.gene29240	MS.gene88586	PPI
MS.gene88586	MS.gene017905	PPI
MS.gene88586	MS.gene066531	PPI
MS.gene88586	MS.gene031757	PPI
MS.gene80819	MS.gene88586	PPI
MS.gene88586	MS.gene00961	PPI
MS.gene70727	MS.gene88586	PPI
MS.gene88586	MS.gene066530	PPI
MS.gene062929	MS.gene88586	PPI
MS.gene88586	MS.gene049813	PPI
MS.gene50704	MS.gene88586	PPI
MS.gene88586	MS.gene26272	PPI
MS.gene27308	MS.gene88586	PPI
MS.gene88586	MS.gene04695	PPI
MS.gene52737	MS.gene88586	PPI
MS.gene88586	MS.gene29241	PPI
MS.gene88586	MS.gene28665	PPI
MS.gene88586	MS.gene28482	PPI
MS.gene88586	MS.gene91107	PPI
MS.gene88586	MS.gene26968	PPI
MS.gene88586	MS.gene056687	PPI
MS.gene026190	MS.gene88586	PPI
MS.gene88586	MS.gene41130	PPI
MS.gene88586	MS.gene56211	PPI
MS.gene88586	MS.gene42511	PPI
MS.gene88586	MS.gene065799	PPI
MS.gene88586	MS.gene29636	PPI
MS.gene88586	MS.gene072437	PPI
MS.gene56212	MS.gene88586	PPI
MS.gene33406	MS.gene88586	PPI
MS.gene030874	MS.gene88586	PPI
MS.gene88586	MS.gene87411	PPI
MS.gene78327	MS.gene88586	PPI
MS.gene84416	MS.gene88586	PPI
MS.gene88586	MS.gene91108	PPI
MS.gene88586	MS.gene026188	PPI
MS.gene88586	MS.gene55171	PPI
MS.gene88586	MS.gene90685	PPI
MS.gene88586	MS.gene55173	PPI
MS.gene88586	MS.gene04694	PPI
MS.gene88586	MS.gene80690	PPI
MS.gene88586	MS.gene068273	PPI
MS.gene052538	MS.gene88586	PPI
MS.gene88586	MS.gene57358	PPI
MS.gene88586	MS.gene072436	PPI
MS.gene88586	MS.gene78329	PPI
MS.gene066532	MS.gene88586	PPI
MS.gene88586	MS.gene32188	PPI
MS.gene88586	MS.gene24951	PPI
MS.gene88586	MS.gene88587	PPI
MS.gene065799	MS.gene88586	PPI
MS.gene88586	MS.gene014127	PPI
MS.gene50065	MS.gene88586	PPI
MS.gene055946	MS.gene88586	PPI
MS.gene88586	MS.gene33740	PPI
MS.gene88586	MS.gene009409	PPI
MS.gene76380	MS.gene88586	PPI
MS.gene004491	MS.gene88586	PPI
MS.gene88586	MS.gene060358	PPI
MS.gene04674	MS.gene88586	PPI
MS.gene041419	MS.gene88586	PPI
MS.gene88586	MS.gene57711	PPI
MS.gene88586	MS.gene72918	PPI
MS.gene011944	MS.gene88586	PPI
MS.gene88586	MS.gene98665	PPI
MS.gene064881	MS.gene88586	PPI
MS.gene88586	MS.gene006546	PPI
MS.gene017222	MS.gene88586	PPI
MS.gene88586	MS.gene23356	PPI
MS.gene88586	MS.gene48055	PPI
MS.gene88586	MS.gene45698	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88586.t1	MTR_1g038630	97.070	512	15	0	1	512	1	512	0.0	1020
MS.gene88586.t1	MTR_1g038600	93.945	512	13	1	1	512	1	494	0.0	976
MS.gene88586.t1	MTR_5g082540	78.304	507	110	0	1	507	1	507	0.0	812
MS.gene88586.t1	MTR_4g091370	64.503	493	169	4	13	500	13	504	0.0	614
MS.gene88586.t1	MTR_3g008160	59.109	494	196	4	13	503	13	503	0.0	606
MS.gene88586.t1	MTR_0009s0370	59.000	500	200	3	1	497	1	498	0.0	600
MS.gene88586.t1	MTR_5g041550	62.124	499	185	3	3	497	2	500	0.0	598
MS.gene88586.t1	MTR_3g093010	59.608	510	200	3	3	506	2	511	0.0	597
MS.gene88586.t1	MTR_4g090600	62.475	493	180	4	11	500	11	501	0.0	588
MS.gene88586.t1	MTR_5g006070	55.689	501	212	4	14	511	13	506	0.0	585
MS.gene88586.t1	MTR_0204s0020	55.967	486	209	3	14	498	12	493	0.0	579
MS.gene88586.t1	MTR_5g094760	54.365	504	220	4	3	500	2	501	0.0	570
MS.gene88586.t1	MTR_0204s0020	55.556	486	208	4	14	498	12	490	0.0	569
MS.gene88586.t1	MTR_3g023480	57.959	490	203	2	14	500	12	501	0.0	568
MS.gene88586.t1	MTR_1g104770	55.400	500	219	3	1	497	1	499	0.0	566
MS.gene88586.t1	MTR_1g104750	54.000	500	225	4	1	497	1	498	0.0	561
MS.gene88586.t1	MTR_7g091690	56.082	485	208	4	15	498	19	499	0.0	561
MS.gene88586.t1	MTR_3g008170	56.687	501	210	5	1	497	1	498	0.0	558
MS.gene88586.t1	MTR_3g008160	59.081	457	181	4	50	503	1	454	0.0	554
MS.gene88586.t1	MTR_6g087040	53.150	508	230	5	1	503	1	505	0.0	545
MS.gene88586.t1	MTR_6g088375	53.150	508	230	5	1	503	1	505	0.0	545
MS.gene88586.t1	MTR_4g116790	51.102	499	239	4	2	499	6	500	0.0	542
MS.gene88586.t1	MTR_1g104780	54.274	503	221	4	13	507	12	513	0.0	541
MS.gene88586.t1	MTR_8g102860	53.479	503	226	5	15	512	18	517	0.0	537
MS.gene88586.t1	MTR_0204s0040	51.400	500	238	4	4	502	10	505	0.0	537
MS.gene88586.t1	MTR_5g006070	55.699	465	196	4	50	511	1	458	0.0	536
MS.gene88586.t1	MTR_4g116770	51.400	500	238	4	4	502	206	701	0.0	535
MS.gene88586.t1	MTR_3g007910	55.315	508	191	7	3	506	2	477	0.0	533
MS.gene88586.t1	MTR_3g093060	58.980	451	181	3	50	496	1	451	0.0	517
MS.gene88586.t1	MTR_3g074390	49.287	491	245	3	14	502	19	507	2.30e-177	509
MS.gene88586.t1	MTR_3g074410	48.992	496	248	4	14	507	16	508	3.66e-172	495
MS.gene88586.t1	MTR_8g102860	52.778	468	213	5	50	512	1	465	1.51e-171	492
MS.gene88586.t1	MTR_3g074270	46.988	498	241	3	1	497	1	476	3.37e-165	476
MS.gene88586.t1	MTR_4g116790	51.105	362	174	3	2	362	6	365	2.27e-132	389
MS.gene88586.t1	MTR_3g074380	49.857	349	171	3	14	360	17	363	2.56e-121	360
MS.gene88586.t1	MTR_3g074320	45.714	315	169	2	189	501	20	334	2.30e-100	306
MS.gene88586.t1	MTR_3g074340	45.397	315	170	2	189	501	20	334	3.21e-99	303
MS.gene88586.t1	MTR_3g074370	45.397	315	170	2	189	501	20	334	3.39e-99	303
MS.gene88586.t1	MTR_3g074400	36.933	463	225	11	50	485	1	423	2.09e-86	273
MS.gene88586.t1	MTR_1g038620	80.380	158	14	1	203	360	50	190	5.26e-80	248
MS.gene88586.t1	MTR_4g069500	28.489	523	322	9	1	495	1	499	1.01e-58	203
MS.gene88586.t1	MTR_6g088450	30.372	484	285	11	13	476	48	499	1.62e-56	197
MS.gene88586.t1	MTR_4g072030	29.703	505	303	12	27	508	31	506	6.17e-56	195
MS.gene88586.t1	MTR_4g069500	30.227	440	283	6	77	495	13	449	2.24e-55	192
MS.gene88586.t1	MTR_5g096000	54.144	181	63	1	3	183	2	162	7.26e-54	184
MS.gene88586.t1	MTR_5g096000	56.329	158	63	3	355	506	151	308	8.10e-39	144
MS.gene88586.t1	MTR_3g116240	27.921	505	313	10	7	484	8	488	2.58e-53	188
MS.gene88586.t1	MTR_5g075300	31.496	508	294	12	7	487	2	482	1.02e-52	186
MS.gene88586.t1	MTR_6g018790	29.854	479	297	8	16	490	102	545	1.23e-52	187
MS.gene88586.t1	MTR_3g084110	27.975	479	312	9	20	490	25	478	1.97e-52	185
MS.gene88586.t1	MTR_7g446340	27.181	493	314	12	12	490	44	505	3.74e-51	182
MS.gene88586.t1	MTR_6g007340	27.181	493	314	12	12	490	44	505	3.74e-51	182
MS.gene88586.t1	MTR_8g103500	29.032	496	299	13	13	487	8	471	8.56e-51	181
MS.gene88586.t1	MTR_1g116660	27.521	476	316	9	21	490	33	485	9.34e-51	181
MS.gene88586.t1	MTR_7g082270	28.753	473	300	8	16	485	62	500	1.11e-49	178
MS.gene88586.t1	MTR_1g116650	27.673	477	303	8	20	490	75	515	1.60e-49	178
MS.gene88586.t1	MTR_8g077890	29.435	496	289	11	22	487	18	482	1.89e-49	177
MS.gene88586.t1	MTR_1g114280	59.091	154	44	2	346	499	21	155	2.12e-49	167
MS.gene88586.t1	MTR_7g005910	27.883	477	314	8	20	490	30	482	2.81e-49	177
MS.gene88586.t1	MTR_5g077580	26.445	571	302	13	21	500	24	567	1.48e-47	174
MS.gene88586.t1	MTR_2g013310	27.479	484	302	13	22	489	52	502	5.52e-47	171
MS.gene88586.t1	MTR_2g013310	29.567	416	265	11	90	489	26	429	1.78e-46	168
MS.gene88586.t1	MTR_2g048720	33.036	336	201	5	21	351	24	340	1.17e-45	168
MS.gene88586.t1	MTR_7g082270	28.941	425	268	7	16	440	62	452	1.24e-44	164
MS.gene88586.t1	MTR_4g077740	29.299	471	290	9	31	484	53	497	1.42e-44	164
MS.gene88586.t1	MTR_2g049020	29.882	338	212	5	21	351	24	343	1.62e-43	162
MS.gene88586.t1	MTR_2g026160	30.145	345	207	7	20	351	24	347	2.18e-41	157
MS.gene88586.t1	MTR_1g022315	27.719	469	308	8	23	488	49	489	3.48e-41	154
MS.gene88586.t1	MTR_0064s0040	50.000	150	61	2	13	162	14	149	4.00e-41	145
MS.gene88586.t1	MTR_7g113970	27.623	467	301	8	21	484	60	492	8.29e-41	154
MS.gene88586.t1	MTR_3g074330	47.500	160	75	2	1	153	1	158	1.22e-40	144
MS.gene88586.t1	MTR_3g074360	47.500	160	75	2	1	153	1	158	1.22e-40	144
MS.gene88586.t1	MTR_3g074310	47.500	160	75	2	1	153	1	158	2.91e-40	144
MS.gene88586.t1	MTR_1g022315	28.715	397	273	5	95	488	1	390	3.05e-40	150
MS.gene88586.t1	MTR_8g077300	28.118	473	294	11	22	484	38	474	2.21e-39	149
MS.gene88586.t1	MTR_8g077310	26.226	469	316	6	18	484	42	482	3.81e-39	149
MS.gene88586.t1	MTR_7g094450	27.778	468	300	10	21	484	37	470	1.21e-38	147
MS.gene88586.t1	MTR_7g094110	28.172	465	297	9	23	484	42	472	2.03e-37	144
MS.gene88586.t1	MTR_5g020270	26.752	471	301	9	23	484	50	485	3.00e-37	144
MS.gene88586.t1	MTR_8g077310	27.296	392	276	4	95	484	1	385	7.17e-37	140
MS.gene88586.t1	MTR_7g113960	27.273	407	272	8	84	484	67	455	9.94e-37	142
MS.gene88586.t1	MTR_4g118610	26.763	482	313	8	13	489	42	488	2.01e-36	141
MS.gene88586.t1	MTR_2g020710	25.153	489	324	8	2	484	28	480	4.55e-36	140
MS.gene88586.t1	MTR_2g020710	26.355	406	278	6	85	484	1	391	2.99e-35	136
MS.gene88586.t1	MTR_5g019870	27.189	434	291	8	77	487	48	479	5.23e-35	137
MS.gene88586.t1	MTR_5g020270	27.569	399	266	7	95	484	1	385	6.99e-35	135
MS.gene88586.t1	MTR_4g069500	29.260	311	198	5	204	495	3	310	3.96e-33	129
MS.gene88586.t1	MTR_8g077310	28.490	351	221	6	18	366	42	364	2.12e-31	125
MS.gene88586.t1	MTR_7g094110	27.253	466	280	10	23	484	42	452	5.01e-31	125
MS.gene88586.t1	MTR_3g080240	25.610	410	281	11	89	489	139	533	2.55e-30	124
MS.gene88586.t1	MTR_2g026140	28.696	345	197	9	20	351	24	332	7.81e-30	123
MS.gene88586.t1	MTR_5g020270	25.431	464	295	8	23	484	50	464	2.02e-29	121
MS.gene88586.t1	MTR_2g020710	25.476	420	271	8	2	415	28	411	5.81e-29	119
MS.gene88586.t1	MTR_4g064820	27.874	348	220	5	23	353	96	429	5.91e-29	120
MS.gene88586.t1	MTR_7g113970	28.529	333	207	6	21	351	60	363	1.27e-28	118
MS.gene88586.t1	MTR_4g118610	27.073	410	259	8	13	417	42	416	1.32e-28	118
MS.gene88586.t1	MTR_4g013205	25.255	392	282	4	94	484	88	469	4.52e-28	117
MS.gene88586.t1	MTR_6g087910	25.800	469	306	10	21	484	52	483	9.41e-28	116
MS.gene88586.t1	MTR_2g020710	25.359	418	270	8	2	413	28	409	1.84e-27	114
MS.gene88586.t1	MTR_7g113960	29.603	277	179	5	84	355	67	332	3.98e-27	113
MS.gene88586.t1	MTR_2g020710	25.606	371	238	7	2	366	28	366	4.22e-25	107
MS.gene88586.t1	MTR_3g116060	31.414	191	125	3	75	259	31	221	2.37e-19	92.0
MS.gene88586.t1	MTR_5g024740	26.667	240	153	5	23	259	4	223	2.09e-18	89.0
MS.gene88586.t1	MTR_8g073100	25.078	319	197	9	23	333	4	288	6.45e-18	87.4
MS.gene88586.t1	MTR_5g044910	28.814	177	124	2	85	259	47	223	3.60e-17	85.1
MS.gene88586.t1	MTR_3g118530	30.588	170	116	2	92	259	54	223	5.67e-16	81.6
MS.gene88586.t1	MTR_3g118530	30.994	171	116	2	92	260	54	224	1.36e-15	80.1
MS.gene88586.t1	MTR_4g030040	28.177	181	126	3	88	266	121	299	1.49e-11	67.0
MS.gene88586.t1	MTR_4g030040	28.177	181	126	3	88	266	120	298	1.67e-11	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88586.t1	AT3G19940	71.951	492	136	2	19	509	21	511	0.0	740
MS.gene88586.t1	AT1G50310	70.363	496	143	4	19	511	21	515	0.0	719
MS.gene88586.t1	AT5G23270	67.134	499	161	2	1	496	1	499	0.0	684
MS.gene88586.t1	AT3G19930	65.415	506	170	3	3	505	2	505	0.0	674
MS.gene88586.t1	AT3G19930	65.415	506	170	3	3	505	2	505	0.0	674
MS.gene88586.t1	AT1G11260	61.554	502	189	3	1	499	1	501	0.0	639
MS.gene88586.t1	AT4G21480	62.986	489	179	2	10	497	10	497	0.0	615
MS.gene88586.t1	AT5G26340	57.256	503	211	3	1	500	1	502	0.0	603
MS.gene88586.t1	AT4G02050	54.960	504	218	5	1	499	1	500	0.0	571
MS.gene88586.t1	AT4G02050	54.960	504	218	5	1	499	1	500	0.0	571
MS.gene88586.t1	AT1G77210	53.571	504	226	5	1	499	1	501	0.0	546
MS.gene88586.t1	AT1G77210	53.571	504	226	5	1	499	1	501	0.0	546
MS.gene88586.t1	AT1G50310	71.191	361	101	3	153	510	11	371	0.0	538
MS.gene88586.t1	AT5G26250	53.593	487	220	4	13	497	12	494	0.0	531
MS.gene88586.t1	AT1G34580	50.800	500	239	3	2	496	3	500	0.0	531
MS.gene88586.t1	AT3G05960	51.703	499	232	5	7	500	5	499	0.0	521
MS.gene88586.t1	AT1G07340	53.082	503	227	6	1	499	1	498	8.14e-176	504
MS.gene88586.t1	AT5G61520	51.653	484	227	3	17	495	18	499	2.06e-175	504
MS.gene88586.t1	AT1G34580	51.106	452	214	3	50	496	1	450	1.01e-167	482
MS.gene88586.t1	AT5G61520	51.549	452	212	3	49	495	2	451	8.96e-160	462
MS.gene88586.t1	AT1G77210	54.155	349	156	4	153	499	6	352	2.29e-129	380
MS.gene88586.t1	AT2G16120	29.577	497	305	9	16	490	19	492	2.15e-56	196
MS.gene88586.t1	AT4G36670	30.785	497	288	12	19	488	13	480	7.46e-55	192
MS.gene88586.t1	AT3G18830	28.846	520	306	12	22	512	35	519	7.47e-55	193
MS.gene88586.t1	AT2G18480	30.105	475	281	12	37	487	36	483	8.40e-55	192
MS.gene88586.t1	AT2G16130	29.175	497	307	9	16	490	19	492	1.43e-54	191
MS.gene88586.t1	AT2G20780	28.690	481	304	10	18	488	50	501	2.20e-50	181
MS.gene88586.t1	AT5G16150	29.449	472	300	7	16	484	98	539	1.44e-49	179
MS.gene88586.t1	AT5G16150	29.449	472	300	7	16	484	98	539	1.44e-49	179
MS.gene88586.t1	AT5G16150	29.449	472	300	7	16	484	98	539	1.44e-49	179
MS.gene88586.t1	AT2G20780	30.244	410	268	8	89	488	42	443	6.48e-47	170
MS.gene88586.t1	AT2G43330	28.270	474	314	7	22	490	30	482	1.28e-46	170
MS.gene88586.t1	AT1G30220	30.383	339	211	5	20	351	25	345	1.29e-45	168
MS.gene88586.t1	AT5G59250	27.859	481	303	8	23	484	98	553	3.64e-44	164
MS.gene88586.t1	AT1G08930	27.463	477	299	10	16	484	51	488	1.31e-42	159
MS.gene88586.t1	AT1G08930	27.463	477	299	10	16	484	51	488	1.31e-42	159
MS.gene88586.t1	AT5G17010	28.085	470	297	8	31	484	55	499	1.89e-42	158
MS.gene88586.t1	AT5G17010	28.085	470	297	8	31	484	55	499	1.89e-42	158
MS.gene88586.t1	AT5G17010	28.085	470	297	8	31	484	55	499	1.89e-42	158
MS.gene88586.t1	AT1G08900	28.818	406	269	7	84	484	23	413	2.66e-41	153
MS.gene88586.t1	AT1G08890	28.256	407	272	8	84	485	67	458	4.19e-41	154
MS.gene88586.t1	AT3G05155	25.895	475	315	9	13	485	17	456	4.43e-41	154
MS.gene88586.t1	AT1G75220	26.939	490	319	7	1	488	35	487	4.91e-41	154
MS.gene88586.t1	AT2G35740	29.296	355	223	6	21	365	24	360	4.94e-41	155
MS.gene88586.t1	AT1G08900	28.818	406	269	7	84	484	57	447	6.91e-41	153
MS.gene88586.t1	AT1G54730	25.813	461	303	8	28	484	37	462	8.80e-41	153
MS.gene88586.t1	AT1G08900	28.818	406	269	7	84	484	65	455	1.04e-40	152
MS.gene88586.t1	AT1G08900	28.818	406	269	7	84	484	65	455	1.04e-40	152
MS.gene88586.t1	AT5G18840	26.237	465	307	7	23	484	44	475	2.50e-39	149
MS.gene88586.t1	AT4G16480	28.532	361	224	6	20	367	24	363	3.37e-39	150
MS.gene88586.t1	AT4G16480	28.532	361	224	6	20	367	24	363	3.37e-39	150
MS.gene88586.t1	AT4G16480	28.532	361	224	6	20	367	24	363	3.37e-39	150
MS.gene88586.t1	AT3G03090	27.872	470	298	8	31	484	55	499	4.07e-39	149
MS.gene88586.t1	AT3G05165	26.427	473	309	8	16	484	23	460	5.90e-39	148
MS.gene88586.t1	AT3G05165	26.427	473	309	8	16	484	23	460	5.90e-39	148
MS.gene88586.t1	AT3G05165	26.427	473	309	8	16	484	23	460	5.90e-39	148
MS.gene88586.t1	AT5G27360	26.556	482	303	11	13	484	25	465	7.36e-39	148
MS.gene88586.t1	AT1G19450	26.964	471	308	7	23	488	49	488	1.14e-38	147
MS.gene88586.t1	AT5G27360	26.556	482	303	11	13	484	73	513	1.58e-38	148
MS.gene88586.t1	AT3G05160	27.273	473	305	9	16	484	14	451	7.28e-38	145
MS.gene88586.t1	AT2G48020	27.941	408	274	7	84	486	68	460	1.36e-37	144
MS.gene88586.t1	AT2G48020	27.941	408	274	7	84	486	68	460	1.36e-37	144
MS.gene88586.t1	AT5G27350	25.726	482	307	9	13	484	21	461	2.63e-37	143
MS.gene88586.t1	AT3G05150	27.069	447	296	9	59	497	58	482	4.32e-37	143
MS.gene88586.t1	AT3G05150	27.146	431	287	8	59	484	58	466	8.70e-37	142
MS.gene88586.t1	AT3G05150	27.146	431	287	8	59	484	58	466	8.70e-37	142
MS.gene88586.t1	AT3G05160	28.066	424	279	8	65	484	1	402	2.63e-36	139
MS.gene88586.t1	AT3G05160	28.066	424	279	8	65	484	1	402	2.63e-36	139
MS.gene88586.t1	AT3G05400	25.420	476	316	10	13	484	16	456	2.80e-35	137
MS.gene88586.t1	AT1G08920	26.392	485	294	12	16	484	25	462	5.24e-34	134
MS.gene88586.t1	AT4G04750	26.305	479	313	11	10	484	26	468	7.59e-34	134
MS.gene88586.t1	AT4G04750	26.305	479	313	11	10	484	26	468	7.59e-34	134
MS.gene88586.t1	AT1G08920	26.392	485	301	12	16	484	25	469	8.24e-34	134
MS.gene88586.t1	AT4G04750	26.305	479	313	11	10	484	70	512	1.28e-33	134
MS.gene88586.t1	AT1G54730	24.837	459	289	10	28	484	37	441	1.29e-33	132
MS.gene88586.t1	AT1G54730	25.298	419	274	8	28	442	37	420	1.39e-33	132
MS.gene88586.t1	AT3G05165	25.778	450	295	8	16	461	23	437	4.12e-33	132
MS.gene88586.t1	AT4G04760	26.464	427	289	7	65	486	1	407	7.59e-33	130
MS.gene88586.t1	AT1G08900	27.989	368	245	7	84	446	65	417	9.45e-33	130
MS.gene88586.t1	AT4G04760	26.087	437	298	7	59	490	54	470	9.47e-33	130
MS.gene88586.t1	AT3G05165	26.506	415	266	8	16	426	23	402	1.76e-32	130
MS.gene88586.t1	AT3G05165	26.506	415	266	8	16	426	23	402	1.76e-32	130
MS.gene88586.t1	AT1G54730	26.087	391	250	8	28	414	37	392	9.69e-32	127
MS.gene88586.t1	AT1G54730	26.087	391	250	8	28	414	37	392	9.69e-32	127
MS.gene88586.t1	AT1G79820	25.420	476	305	12	18	484	53	487	1.24e-30	125
MS.gene88586.t1	AT1G79820	25.420	476	305	12	18	484	53	487	1.24e-30	125
MS.gene88586.t1	AT5G27360	26.914	405	245	11	14	408	26	389	3.30e-30	122
MS.gene88586.t1	AT5G27360	26.509	381	250	8	114	484	1	361	6.62e-30	120
MS.gene88586.t1	AT5G27360	26.509	381	250	8	114	484	1	361	6.62e-30	120
MS.gene88586.t1	AT1G05030	24.946	465	305	12	29	484	85	514	1.47e-29	122
MS.gene88586.t1	AT3G05400	26.712	438	285	13	66	484	16	436	2.39e-29	120
MS.gene88586.t1	AT1G08920	26.174	447	267	12	16	446	25	424	3.34e-29	120
MS.gene88586.t1	AT4G04760	25.459	436	291	8	59	486	54	463	4.58e-29	120
MS.gene88586.t1	AT3G05155	25.000	340	223	6	13	351	17	325	5.63e-29	117
MS.gene88586.t1	AT1G54730	26.994	326	207	6	28	351	37	333	1.02e-28	117
MS.gene88586.t1	AT1G05030	25.182	413	287	9	80	484	64	462	1.80e-28	118
MS.gene88586.t1	AT1G67300	24.790	476	304	11	21	484	53	486	1.87e-28	118
MS.gene88586.t1	AT1G67300	24.790	476	304	11	21	484	53	486	1.87e-28	118
MS.gene88586.t1	AT1G67300	24.684	474	308	11	21	484	53	487	6.38e-28	117
MS.gene88586.t1	AT1G67300	24.882	422	264	10	21	431	53	432	4.77e-27	114
MS.gene88586.t1	AT1G67300	24.882	422	264	10	21	431	53	432	4.77e-27	114
MS.gene88586.t1	AT1G67300	25.882	340	210	8	21	351	53	359	8.98e-27	112
MS.gene88586.t1	AT1G67300	25.882	340	210	8	21	351	53	359	8.98e-27	112
MS.gene88586.t1	AT1G54730	24.221	417	260	10	28	442	37	399	1.05e-26	112
MS.gene88586.t1	AT1G79820	25.355	422	266	11	18	431	53	433	3.57e-26	111
MS.gene88586.t1	AT2G48020	29.412	289	189	5	84	370	68	343	8.34e-26	109
MS.gene88586.t1	AT1G54730	26.000	300	194	5	28	325	37	310	1.69e-25	107
MS.gene88586.t1	AT1G54730	26.000	300	194	5	28	325	37	310	1.69e-25	107
MS.gene88586.t1	AT1G54730	24.936	389	236	10	28	414	37	371	4.68e-25	107
MS.gene88586.t1	AT2G48020	29.779	272	177	5	84	351	68	329	5.26e-25	106
MS.gene88586.t1	AT3G51490	28.870	239	149	5	23	259	4	223	5.88e-23	103
MS.gene88586.t1	AT5G17010	25.478	471	248	14	31	484	52	436	6.19e-23	101
MS.gene88586.t1	AT3G51490	28.870	239	149	5	23	259	4	223	6.27e-23	103
MS.gene88586.t1	AT3G20460	20.964	415	290	7	84	484	93	483	3.61e-22	100
MS.gene88586.t1	AT3G51490	34.104	173	111	3	89	259	2	173	1.54e-21	99.0
MS.gene88586.t1	AT1G79820	23.739	476	265	10	18	484	53	439	3.58e-21	96.7
MS.gene88586.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.36e-17	86.7
MS.gene88586.t1	AT1G20840	31.176	170	115	2	92	259	52	221	1.36e-17	86.7
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.51e-17	85.5
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.51e-17	85.5
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.51e-17	85.5
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT4G35300	33.333	174	113	3	89	260	52	224	3.61e-17	85.1
MS.gene88586.t1	AT1G79820	23.944	355	199	7	137	484	87	377	1.23e-15	79.3

Find 103 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGATTTGTAGCTTATTAT+TGG	0.121740	1.4:+23350815	MS.gene88586:intron
GGTGGCTTATTCTTCCTTAT+TGG	0.172841	1.4:+23349603	MS.gene88586:CDS
CTTATTGGTGCAATACTAAA+TGG	0.174477	1.4:+23349618	MS.gene88586:CDS
ATAATTGGTCGTCTACTTCT+AGG	0.240972	1.4:+23349666	MS.gene88586:CDS
GTCTTCACAGTAGACAAATT+TGG	0.247973	1.4:+23350631	MS.gene88586:CDS
GGTTATGATCTTGGTATTAC+TGG	0.252498	1.4:+23349366	MS.gene88586:CDS
GCCTCTTTCAATCAAGGAAT+TGG	0.266641	1.4:-23350293	None:intergenic
ATCCTAATTGCATCAAAGTT+TGG	0.279050	1.4:+23350839	MS.gene88586:CDS
TCTGGAAGTCACATTGGTTT+TGG	0.285918	1.4:+23351200	MS.gene88586:CDS
TGGAGAGTCTCTTTGGGTCT+TGG	0.294554	1.4:+23350217	MS.gene88586:CDS
AAATGGATGGAGAGTCTCTT+TGG	0.299432	1.4:+23350210	MS.gene88586:CDS
GCCGCAAATCTGATTAATTA+TGG	0.310183	1.4:+23350172	MS.gene88586:CDS
AACGTTGAAATGCTAATAAT+TGG	0.313941	1.4:+23349651	MS.gene88586:CDS
ACTCTATTCATTTCTTCAAT+TGG	0.314434	1.4:-23351178	None:intergenic
ATGCTTTGTCACTTGAAGTT+TGG	0.316796	1.4:+23351076	MS.gene88586:CDS
CTATCAATGCTGCAAGGTAT+AGG	0.318723	1.4:-23349521	None:intergenic
CGCAAGGCCTCAATGTTTCT+TGG	0.321805	1.4:+23349582	MS.gene88586:CDS
CTCACAAATGTTTATTTGTC+AGG	0.326178	1.4:+23350681	MS.gene88586:CDS
ATCCAAACTTTGATGCAATT+AGG	0.340688	1.4:-23350841	None:intergenic
CCGTTCTTCCAACAACTTAC+CGG	0.340791	1.4:+23350487	MS.gene88586:CDS
TGCATGGTCTTGGGGACCAT+TGG	0.347323	1.4:+23350940	MS.gene88586:CDS
GGTCGTCTACTTCTAGGATT+TGG	0.352688	1.4:+23349672	MS.gene88586:CDS
CATTTAGTATTGCACCAATA+AGG	0.352816	1.4:-23349617	None:intergenic
TTGCGGCATTTGCATGGTCT+TGG	0.355570	1.4:+23350930	MS.gene88586:CDS
CTCTATTCATTTCTTCAATT+GGG	0.356482	1.4:-23351177	None:intergenic
AAGTGAAATTTGCGCTTTAG+AGG	0.361431	1.4:+23350976	MS.gene88586:CDS
TGCGGCATTTGCATGGTCTT+GGG	0.366872	1.4:+23350931	MS.gene88586:CDS
GTGAGTTGAGGCCTATATTC+TGG	0.368775	1.4:-23350448	None:intergenic
CTCATGTCTGCGGTTATTAG+TGG	0.373226	1.4:+23350577	MS.gene88586:CDS
TACCAATTGTAATCATCATT+TGG	0.376785	1.4:-23350144	None:intergenic
TGGTGGTGGTAATAACAAAA+AGG	0.387545	1.4:+23351249	MS.gene88586:CDS
CCTCTTTCAATCAAGGAATT+GGG	0.388947	1.4:-23350292	None:intergenic
CAAAGCCTAAGATCTTAAAA+AGG	0.389887	1.4:-23350540	None:intergenic
GCATGGTCTTGGGGACCATT+GGG	0.399402	1.4:+23350941	MS.gene88586:CDS
TATCAATGCTGCAAGGTATA+GGG	0.407532	1.4:-23349520	None:intergenic
ACCAGTGTATTTGTCTGAAA+TGG	0.417528	1.4:+23350084	MS.gene88586:CDS
AAACATGTCATTAACACATA+TGG	0.418399	1.4:-23349315	None:intergenic
GAGAAGGTCGGCTTCACCTT+TGG	0.418457	1.4:-23350885	None:intergenic
GGTCTTGGGGACCATTGGGT+TGG	0.420130	1.4:+23350945	MS.gene88586:CDS
ATGGTTGCCTCTTTCAATCA+AGG	0.423463	1.4:-23350299	None:intergenic
CATTAATGCCGGTAAGTTGT+TGG	0.423967	1.4:-23350495	None:intergenic
CCCAATTCCTTGATTGAAAG+AGG	0.424552	1.4:+23350292	MS.gene88586:CDS
TTGGGGACCATTGGGTTGGT+TGG	0.425742	1.4:+23350949	MS.gene88586:CDS
ACCATAATTAATCAGATTTG+CGG	0.426945	1.4:-23350173	None:intergenic
TCTTGATCAAATTCTTTCCT+CGG	0.432055	1.4:+23349412	MS.gene88586:CDS
ACATTACTCAACCAGAATAT+AGG	0.435284	1.4:+23350437	MS.gene88586:CDS
CCTAGACACAAAAGAATTGC+TGG	0.439430	1.4:-23350247	None:intergenic
CTTGATCAAATTCTTTCCTC+GGG	0.441826	1.4:+23349413	MS.gene88586:CDS
TTCCAAATGATGATTACAAT+TGG	0.443048	1.4:+23350142	MS.gene88586:CDS
TTGAAGAAATGAATAGAGTC+TGG	0.449094	1.4:+23351182	MS.gene88586:CDS
GCTTTAGAGGTTCGACCAGC+AGG	0.455770	1.4:+23350989	MS.gene88586:CDS
CAGTAGACAAATTTGGAAGA+AGG	0.456163	1.4:+23350638	MS.gene88586:CDS
AATGGATGGAGAGTCTCTTT+GGG	0.457369	1.4:+23350211	MS.gene88586:CDS
ACATTTATAGCTTGACCTGC+TGG	0.465665	1.4:-23351004	None:intergenic
AAGCAAAGGCAATGTTGAAA+AGG	0.468116	1.4:+23350326	MS.gene88586:CDS
TCAAGTGACAAAGCATGGTT+AGG	0.470864	1.4:-23351069	None:intergenic
GCATCAAAGTTTGGATTGAC+CGG	0.473334	1.4:+23350848	MS.gene88586:CDS
CCTGATCATGTTGTTGGTGG+TGG	0.485076	1.4:+23351235	MS.gene88586:CDS
CCACCACCAACAACATGATC+AGG	0.485601	1.4:-23351235	None:intergenic
TACTGGAGGAGTGACTTCTA+TGG	0.491588	1.4:+23349383	MS.gene88586:CDS
AAGGCCTCAATGTTTCTTGG+TGG	0.494989	1.4:+23349585	MS.gene88586:CDS
TGCTAGTGAAGAAGCTAGTA+AGG	0.497047	1.4:+23350396	MS.gene88586:CDS
TTCCACAATCACAAGAATGA+TGG	0.497068	1.4:+23349557	MS.gene88586:CDS
GGTTGAGTAATGTTCTTCCA+TGG	0.497635	1.4:-23350427	None:intergenic
TTTGGTAAATGATCCTTGTC+CGG	0.509153	1.4:-23350867	None:intergenic
AAGTTTGGATTGACCGGACA+AGG	0.515034	1.4:+23350854	MS.gene88586:CDS
AAGAAGGTTATTATTTCTTG+AGG	0.518335	1.4:+23350654	MS.gene88586:CDS
TATGTTCCTGATCATGTTGT+TGG	0.520771	1.4:+23351229	MS.gene88586:CDS
AGAAGGTTATTATTTCTTGA+GGG	0.523975	1.4:+23350655	MS.gene88586:CDS
AATTAATCAGATTTGCGGCT+AGG	0.524661	1.4:-23350168	None:intergenic
CTACTTCTAGGATTTGGTGT+GGG	0.532326	1.4:+23349678	MS.gene88586:CDS
AGCAATGAAAACGGTCATGA+TGG	0.533611	1.4:-23351128	None:intergenic
GTTCCTGATCATGTTGTTGG+TGG	0.537519	1.4:+23351232	MS.gene88586:CDS
ATTAGAGGAGCACTTAACAT+TGG	0.539318	1.4:+23350118	MS.gene88586:CDS
CACTAATAACCGCAGACATG+AGG	0.542056	1.4:-23350576	None:intergenic
TCCCATCATTCTTGTGATTG+TGG	0.543740	1.4:-23349559	None:intergenic
CTAGTAAGGTGGAACATCCA+TGG	0.545991	1.4:+23350410	MS.gene88586:CDS
AAACATGATAACATTAATGC+CGG	0.548089	1.4:-23350506	None:intergenic
CCGGTAAGTTGTTGGAAGAA+CGG	0.553582	1.4:-23350487	None:intergenic
TAAGAGCACAGCAATGAAAA+CGG	0.561961	1.4:-23351137	None:intergenic
CATATGTTGCGGCATTTGCA+TGG	0.566036	1.4:+23350924	MS.gene88586:CDS
GGAGCTTTCGTTGAGACGAG+TGG	0.569051	1.4:+23349264	MS.gene88586:CDS
TCTAAAGCGCAAATTTCACT+TGG	0.574553	1.4:-23350974	None:intergenic
AGGTTATTATTTCTTGAGGG+TGG	0.575907	1.4:+23350658	MS.gene88586:CDS
CACAAGAATGATGGGACGCA+AGG	0.577104	1.4:+23349566	MS.gene88586:CDS
TCCACAATCACAAGAATGAT+GGG	0.581040	1.4:+23349558	MS.gene88586:CDS
GCGGCATTTGCATGGTCTTG+GGG	0.583074	1.4:+23350932	MS.gene88586:CDS
ATGTCTGCGGTTATTAGTGG+TGG	0.592724	1.4:+23350580	MS.gene88586:CDS
ACTAATAACCGCAGACATGA+GGG	0.599477	1.4:-23350575	None:intergenic
TATGATCTTGGTATTACTGG+AGG	0.600534	1.4:+23349369	MS.gene88586:CDS
AAACTTCAAGTGACAAAGCA+TGG	0.605901	1.4:-23351074	None:intergenic
TCTACTTCTAGGATTTGGTG+TGG	0.607831	1.4:+23349677	MS.gene88586:CDS
ATAGAGTCTGGAAGTCACAT+TGG	0.624479	1.4:+23351194	MS.gene88586:CDS
CTTGGCACCAACCAACCCAA+TGG	0.625880	1.4:-23350956	None:intergenic
AGGTCAAGCTATAAATGTTG+CGG	0.633836	1.4:+23351009	MS.gene88586:CDS
GCCATTTCAGACAAATACAC+TGG	0.648392	1.4:-23350085	None:intergenic
TAAGCCACCAAGAAACATTG+AGG	0.652763	1.4:-23349589	None:intergenic
TGATGCTTCCCTCATGTCTG+CGG	0.661280	1.4:+23350567	MS.gene88586:CDS
AAGAAGCTATCAATGCTGCA+AGG	0.663331	1.4:-23349527	None:intergenic
AAACTGACGAAAGTGAGTTG+AGG	0.682636	1.4:-23350460	None:intergenic
GGACAAGGATCATTTACCAA+AGG	0.690139	1.4:+23350869	MS.gene88586:CDS
TAGTGAAGAAGCTAGTAAGG+TGG	0.692736	1.4:+23350399	MS.gene88586:CDS
GCAATGTTGAAAAGGATCCG+CGG	0.695814	1.4:+23350334	MS.gene88586:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAATATAGATATTTTTTAC+CGG	+	chr1.4:23349931-23349950	MS.gene88586:intron	10.0%
!!!	TGTATTTTAAATAATGTATG+TGG	+	chr1.4:23349788-23349807	MS.gene88586:intron	15.0%
!!	AGTGGAATAAAAAATTATGA+GGG	+	chr1.4:23349282-23349301	MS.gene88586:CDS	20.0%
!!!	ATATTCTTCATCAACATTTT+CGG	-	chr1.4:23350362-23350381	None:intergenic	20.0%
!!!	TATGATTTGTAGCTTATTAT+TGG	+	chr1.4:23350815-23350834	MS.gene88586:intron	20.0%
!	AAACATGATAACATTAATGC+CGG	-	chr1.4:23350509-23350528	None:intergenic	25.0%
!	AAACATGTCATTAACACATA+TGG	-	chr1.4:23349318-23349337	None:intergenic	25.0%
!	AACGTTGAAATGCTAATAAT+TGG	+	chr1.4:23349651-23349670	MS.gene88586:CDS	25.0%
!	AATAAAAAACAAGAGAAGGT+CGG	-	chr1.4:23350900-23350919	None:intergenic	25.0%
!	AATGTATGTGGTCTTTATTA+TGG	+	chr1.4:23349800-23349819	MS.gene88586:intron	25.0%
!	ACCATAATTAATCAGATTTG+CGG	-	chr1.4:23350176-23350195	None:intergenic	25.0%
!	ACTCTATTCATTTCTTCAAT+TGG	-	chr1.4:23351181-23351200	None:intergenic	25.0%
!	CACAAATAAAAAACAAGAGA+AGG	-	chr1.4:23350904-23350923	None:intergenic	25.0%
!	CATTCATTAAATGATGTATG+TGG	-	chr1.4:23349827-23349846	None:intergenic	25.0%
!	CTCTATTCATTTCTTCAATT+GGG	-	chr1.4:23351180-23351199	None:intergenic	25.0%
!	GAGTGGAATAAAAAATTATG+AGG	+	chr1.4:23349281-23349300	MS.gene88586:CDS	25.0%
!	TACCAATTGTAATCATCATT+TGG	-	chr1.4:23350147-23350166	None:intergenic	25.0%
!	TTCCAAATGATGATTACAAT+TGG	+	chr1.4:23350142-23350161	MS.gene88586:CDS	25.0%
!!	AAGAAGGTTATTATTTCTTG+AGG	+	chr1.4:23350654-23350673	MS.gene88586:CDS	25.0%
!!	AGAAGGTTATTATTTCTTGA+GGG	+	chr1.4:23350655-23350674	MS.gene88586:CDS	25.0%
!!!	TTTTATTTGTGCATATGTTG+CGG	+	chr1.4:23350913-23350932	MS.gene88586:CDS	25.0%
	AACCAGCAAAGAAAAAGAAA+AGG	-	chr1.4:23351102-23351121	None:intergenic	30.0%
	AAGTTATAATATACACCCTC+CGG	+	chr1.4:23349744-23349763	MS.gene88586:intron	30.0%
	ACATTACTCAACCAGAATAT+AGG	+	chr1.4:23350437-23350456	MS.gene88586:CDS	30.0%
	ATCCAAACTTTGATGCAATT+AGG	-	chr1.4:23350844-23350863	None:intergenic	30.0%
	ATCCTAATTGCATCAAAGTT+TGG	+	chr1.4:23350839-23350858	MS.gene88586:CDS	30.0%
	CAAAGCCTAAGATCTTAAAA+AGG	-	chr1.4:23350543-23350562	None:intergenic	30.0%
	CATTTAGTATTGCACCAATA+AGG	-	chr1.4:23349620-23349639	None:intergenic	30.0%
	CTCACAAATGTTTATTTGTC+AGG	+	chr1.4:23350681-23350700	MS.gene88586:CDS	30.0%
	CTTATTGGTGCAATACTAAA+TGG	+	chr1.4:23349618-23349637	MS.gene88586:CDS	30.0%
	TCTTGATCAAATTCTTTCCT+CGG	+	chr1.4:23349412-23349431	MS.gene88586:CDS	30.0%
	TTGAAGAAATGAATAGAGTC+TGG	+	chr1.4:23351182-23351201	MS.gene88586:CDS	30.0%
	TTGTCTATTGTCTAAACAGT+CGG	+	chr1.4:23350060-23350079	MS.gene88586:intron	30.0%
!	GTTTTGCTTATAATAGTGAC+CGG	+	chr1.4:23349862-23349881	MS.gene88586:intron	30.0%
!	GTTTTGCTTATAATAGTGAC+CGG	-	chr1.4:23349881-23349862	None:intergenic	30.0%
!	TTCTTCAATTGGGACATTTT+TGG	-	chr1.4:23351170-23351189	None:intergenic	30.0%
!!!	CTTTTTAAGATCTTAGGCTT+TGG	+	chr1.4:23350541-23350560	MS.gene88586:CDS	30.0%
!!!	GCGTAAAACCTTTTATTTTG+CGG	-	chr1.4:23349960-23349979	None:intergenic	30.0%
	AAACTTCAAGTGACAAAGCA+TGG	-	chr1.4:23351077-23351096	None:intergenic	35.0%
	AAGCAAAGGCAATGTTGAAA+AGG	+	chr1.4:23350326-23350345	MS.gene88586:CDS	35.0%
	AAGTGAAATTTGCGCTTTAG+AGG	+	chr1.4:23350976-23350995	MS.gene88586:CDS	35.0%
	AATTAATCAGATTTGCGGCT+AGG	-	chr1.4:23350171-23350190	None:intergenic	35.0%
	ACAAACAAGGACACACATAT+AGG	-	chr1.4:23350762-23350781	None:intergenic	35.0%
	ACCAGTGTATTTGTCTGAAA+TGG	+	chr1.4:23350084-23350103	MS.gene88586:CDS	35.0%
	AGGTCAAGCTATAAATGTTG+CGG	+	chr1.4:23351009-23351028	MS.gene88586:CDS	35.0%
	ATAATTGGTCGTCTACTTCT+AGG	+	chr1.4:23349666-23349685	MS.gene88586:CDS	35.0%
	CAGTAGACAAATTTGGAAGA+AGG	+	chr1.4:23350638-23350657	MS.gene88586:CDS	35.0%
	CCTAAGATCTTAAAAAGGAC+GGG	-	chr1.4:23350538-23350557	None:intergenic	35.0%
	CCTCTTTCAATCAAGGAATT+GGG	-	chr1.4:23350295-23350314	None:intergenic	35.0%
	CTTCCAAGCATAAAAATGGA+TGG	+	chr1.4:23350197-23350216	MS.gene88586:CDS	35.0%
	CTTGATCAAATTCTTTCCTC+GGG	+	chr1.4:23349413-23349432	MS.gene88586:CDS	35.0%
	GCCGCAAATCTGATTAATTA+TGG	+	chr1.4:23350172-23350191	MS.gene88586:CDS	35.0%
	GCCTAAGATCTTAAAAAGGA+CGG	-	chr1.4:23350539-23350558	None:intergenic	35.0%
	GGGTGTTTCACCTAAAAAAA+GGG	-	chr1.4:23350275-23350294	None:intergenic	35.0%
	GGTACTTCCAAGCATAAAAA+TGG	+	chr1.4:23350193-23350212	MS.gene88586:CDS	35.0%
	GGTTATGATCTTGGTATTAC+TGG	+	chr1.4:23349366-23349385	MS.gene88586:CDS	35.0%
	GTCTTCACAGTAGACAAATT+TGG	+	chr1.4:23350631-23350650	MS.gene88586:CDS	35.0%
	TATCAATGCTGCAAGGTATA+GGG	-	chr1.4:23349523-23349542	None:intergenic	35.0%
	TATGATCTTGGTATTACTGG+AGG	+	chr1.4:23349369-23349388	MS.gene88586:CDS	35.0%
	TATGTTCCTGATCATGTTGT+TGG	+	chr1.4:23351229-23351248	MS.gene88586:CDS	35.0%
	TCCACAATCACAAGAATGAT+GGG	+	chr1.4:23349558-23349577	MS.gene88586:CDS	35.0%
	TGAACAGTTCCATACAAACA+AGG	-	chr1.4:23350775-23350794	None:intergenic	35.0%
	TGGGTGTTTCACCTAAAAAA+AGG	-	chr1.4:23350276-23350295	None:intergenic	35.0%
	TTCCACAATCACAAGAATGA+TGG	+	chr1.4:23349557-23349576	MS.gene88586:CDS	35.0%
	TTTGGTAAATGATCCTTGTC+CGG	-	chr1.4:23350870-23350889	None:intergenic	35.0%
!	ACATGTTTTGTAGCTGCAAT+GGG	+	chr1.4:23349330-23349349	MS.gene88586:CDS	35.0%
!	AGGTTATTATTTCTTGAGGG+TGG	+	chr1.4:23350658-23350677	MS.gene88586:CDS	35.0%
!	ATGCTTTGTCACTTGAAGTT+TGG	+	chr1.4:23351076-23351095	MS.gene88586:CDS	35.0%
!	CTTCTTTTCGGTTATGATCT+TGG	+	chr1.4:23349357-23349376	MS.gene88586:CDS	35.0%
!	TAAGAGCACAGCAATGAAAA+CGG	-	chr1.4:23351140-23351159	None:intergenic	35.0%
!	TATGTGTGTCCTTGTTTGTA+TGG	+	chr1.4:23350763-23350782	MS.gene88586:intron	35.0%
!	TCTAAAGCGCAAATTTCACT+TGG	-	chr1.4:23350977-23350996	None:intergenic	35.0%
!	TTCATTCTTTTATACACCCG+AGG	-	chr1.4:23349432-23349451	None:intergenic	35.0%
!!	ATTAGAGGAGCACTTAACAT+TGG	+	chr1.4:23350118-23350137	MS.gene88586:CDS	35.0%
!!	TCTCCATCCATTTTTATGCT+TGG	-	chr1.4:23350203-23350222	None:intergenic	35.0%
!!	TGGTGGTGGTAATAACAAAA+AGG	+	chr1.4:23351249-23351268	MS.gene88586:CDS	35.0%
!!!	AATTGGGACATTTTTGGTCT+CGG	-	chr1.4:23351164-23351183	None:intergenic	35.0%
!!!	ACATTGCCTTTGCTTTTTCA+TGG	-	chr1.4:23350321-23350340	None:intergenic	35.0%
!!!	CTTTTTCTTTGCTGGTTTTG+TGG	+	chr1.4:23351105-23351124	MS.gene88586:CDS	35.0%
!!!	TGTCTAGGATCCCTTTTTTT+AGG	+	chr1.4:23350262-23350281	MS.gene88586:CDS	35.0%
	AAACTGACGAAAGTGAGTTG+AGG	-	chr1.4:23350463-23350482	None:intergenic	40.0%
	AAATGGATGGAGAGTCTCTT+TGG	+	chr1.4:23350210-23350229	MS.gene88586:CDS	40.0%
	AAGAAGCTATCAATGCTGCA+AGG	-	chr1.4:23349530-23349549	None:intergenic	40.0%
	AATGGATGGAGAGTCTCTTT+GGG	+	chr1.4:23350211-23350230	MS.gene88586:CDS	40.0%
	ACATTTATAGCTTGACCTGC+TGG	-	chr1.4:23351007-23351026	None:intergenic	40.0%
	ACTAATAACCGCAGACATGA+GGG	-	chr1.4:23350578-23350597	None:intergenic	40.0%
	AGCAATGAAAACGGTCATGA+TGG	-	chr1.4:23351131-23351150	None:intergenic	40.0%
	AGGCAACCATGAAAAAGCAA+AGG	+	chr1.4:23350312-23350331	MS.gene88586:CDS	40.0%
	ATAGAGTCTGGAAGTCACAT+TGG	+	chr1.4:23351194-23351213	MS.gene88586:CDS	40.0%
	ATGGCTCCAGCAAAAATTAG+AGG	+	chr1.4:23350103-23350122	MS.gene88586:CDS	40.0%
	ATGGTTGCCTCTTTCAATCA+AGG	-	chr1.4:23350302-23350321	None:intergenic	40.0%
	CATTAATGCCGGTAAGTTGT+TGG	-	chr1.4:23350498-23350517	None:intergenic	40.0%
	CCCAATTCCTTGATTGAAAG+AGG	+	chr1.4:23350292-23350311	MS.gene88586:CDS	40.0%
	CCTAGACACAAAAGAATTGC+TGG	-	chr1.4:23350250-23350269	None:intergenic	40.0%
	CTATCAATGCTGCAAGGTAT+AGG	-	chr1.4:23349524-23349543	None:intergenic	40.0%
	GCATCAAAGTTTGGATTGAC+CGG	+	chr1.4:23350848-23350867	MS.gene88586:CDS	40.0%
	GCCATTTCAGACAAATACAC+TGG	-	chr1.4:23350088-23350107	None:intergenic	40.0%
	GCCTCTTTCAATCAAGGAAT+TGG	-	chr1.4:23350296-23350315	None:intergenic	40.0%
	GGACAAGGATCATTTACCAA+AGG	+	chr1.4:23350869-23350888	MS.gene88586:CDS	40.0%
	GGTGGCTTATTCTTCCTTAT+TGG	+	chr1.4:23349603-23349622	MS.gene88586:CDS	40.0%
	GGTTGAGTAATGTTCTTCCA+TGG	-	chr1.4:23350430-23350449	None:intergenic	40.0%
	TAAGCCACCAAGAAACATTG+AGG	-	chr1.4:23349592-23349611	None:intergenic	40.0%
	TAGTGAAGAAGCTAGTAAGG+TGG	+	chr1.4:23350399-23350418	MS.gene88586:CDS	40.0%
	TCAAGTGACAAAGCATGGTT+AGG	-	chr1.4:23351072-23351091	None:intergenic	40.0%
	TCCCATCATTCTTGTGATTG+TGG	-	chr1.4:23349562-23349581	None:intergenic	40.0%
	TGCTAGTGAAGAAGCTAGTA+AGG	+	chr1.4:23350396-23350415	MS.gene88586:CDS	40.0%
	TGCTTATAATAGTGACCGGA+GGG	+	chr1.4:23349866-23349885	MS.gene88586:intron	40.0%
	TGCTTATAATAGTGACCGGA+GGG	-	chr1.4:23349885-23349866	None:intergenic	40.0%
	TTGCTTATAATAGTGACCGG+AGG	+	chr1.4:23349865-23349884	MS.gene88586:intron	40.0%
	TTGCTTATAATAGTGACCGG+AGG	-	chr1.4:23349884-23349865	None:intergenic	40.0%
!	AGTGCTCCTCTAATTTTTGC+TGG	-	chr1.4:23350112-23350131	None:intergenic	40.0%
!	CCAGCAATTCTTTTGTGTCT+AGG	+	chr1.4:23350247-23350266	MS.gene88586:CDS	40.0%
!	GACATGTTTTGTAGCTGCAA+TGG	+	chr1.4:23349329-23349348	MS.gene88586:CDS	40.0%
!	GGCCTTTTCTTTTTCTTTGC+TGG	+	chr1.4:23351097-23351116	MS.gene88586:CDS	40.0%
!	GTGTTGAATTTTACACCCTC+CGG	-	chr1.4:23349884-23349903	None:intergenic	40.0%
!!	CTACTTCTAGGATTTGGTGT+GGG	+	chr1.4:23349678-23349697	MS.gene88586:CDS	40.0%
!!	TCTACTTCTAGGATTTGGTG+TGG	+	chr1.4:23349677-23349696	MS.gene88586:CDS	40.0%
!!!	ACCTTTTATTTTGCGGAAGC+CGG	-	chr1.4:23349953-23349972	None:intergenic	40.0%
!!!	ATTGGGACATTTTTGGTCTC+GGG	-	chr1.4:23351163-23351182	None:intergenic	40.0%
!!!	CCCGTCCTTTTTAAGATCTT+AGG	+	chr1.4:23350535-23350554	MS.gene88586:CDS	40.0%
!!!	TCTGGAAGTCACATTGGTTT+TGG	+	chr1.4:23351200-23351219	MS.gene88586:CDS	40.0%
	AAGGCCTCAATGTTTCTTGG+TGG	+	chr1.4:23349585-23349604	MS.gene88586:CDS	45.0%
	AAGTTTGGATTGACCGGACA+AGG	+	chr1.4:23350854-23350873	MS.gene88586:CDS	45.0%
	ATGTCTGCGGTTATTAGTGG+TGG	+	chr1.4:23350580-23350599	MS.gene88586:CDS	45.0%
	CACTAATAACCGCAGACATG+AGG	-	chr1.4:23350579-23350598	None:intergenic	45.0%
	CATATGTTGCGGCATTTGCA+TGG	+	chr1.4:23350924-23350943	MS.gene88586:CDS	45.0%
	CCGGTAAGTTGTTGGAAGAA+CGG	-	chr1.4:23350490-23350509	None:intergenic	45.0%
	CCGTTCTTCCAACAACTTAC+CGG	+	chr1.4:23350487-23350506	MS.gene88586:CDS	45.0%
	CTAGTAAGGTGGAACATCCA+TGG	+	chr1.4:23350410-23350429	MS.gene88586:CDS	45.0%
	CTCATGTCTGCGGTTATTAG+TGG	+	chr1.4:23350577-23350596	MS.gene88586:CDS	45.0%
	GCAATGTTGAAAAGGATCCG+CGG	+	chr1.4:23350334-23350353	MS.gene88586:CDS	45.0%
	GTTCCTGATCATGTTGTTGG+TGG	+	chr1.4:23351232-23351251	MS.gene88586:CDS	45.0%
	TACTGGAGGAGTGACTTCTA+TGG	+	chr1.4:23349383-23349402	MS.gene88586:CDS	45.0%
!	ACCGGCTTCCGCAAAATAAA+AGG	+	chr1.4:23349949-23349968	MS.gene88586:intron	45.0%
!	CATCAACATTTTCGGTTCCG+CGG	-	chr1.4:23350354-23350373	None:intergenic	45.0%
!	GCAATGGGAGGTCTTCTTTT+CGG	+	chr1.4:23349345-23349364	MS.gene88586:CDS	45.0%
!	GTGAGTTGAGGCCTATATTC+TGG	-	chr1.4:23350451-23350470	None:intergenic	45.0%
!	TGGTGTGGGATTTTGCAATC+AGG	+	chr1.4:23349692-23349711	MS.gene88586:CDS	45.0%
!	TGTTTTGTAGCTGCAATGGG+AGG	+	chr1.4:23349333-23349352	MS.gene88586:CDS	45.0%
!!	GGTCGTCTACTTCTAGGATT+TGG	+	chr1.4:23349672-23349691	MS.gene88586:CDS	45.0%
!!	TTAGTTAATTATAAATTATT+TGG	-	chr1.4:23350028-23350047	None:intergenic	5.0%
!!!	AATTAAATTTCTTAATATTT+TGG	+	chr1.4:23349999-23350018	MS.gene88586:intron	5.0%
	CCACCACCAACAACATGATC+AGG	-	chr1.4:23351238-23351257	None:intergenic	50.0%
	CGCAAGGCCTCAATGTTTCT+TGG	+	chr1.4:23349582-23349601	MS.gene88586:CDS	50.0%
	TGATGCTTCCCTCATGTCTG+CGG	+	chr1.4:23350567-23350586	MS.gene88586:CDS	50.0%
	TGCGGCATTTGCATGGTCTT+GGG	+	chr1.4:23350931-23350950	MS.gene88586:CDS	50.0%
	TGGAGAGTCTCTTTGGGTCT+TGG	+	chr1.4:23350217-23350236	MS.gene88586:CDS	50.0%
	TTGCGGCATTTGCATGGTCT+TGG	+	chr1.4:23350930-23350949	MS.gene88586:CDS	50.0%
!	CACAAGAATGATGGGACGCA+AGG	+	chr1.4:23349566-23349585	MS.gene88586:CDS	50.0%
!	CCTGATCATGTTGTTGGTGG+TGG	+	chr1.4:23351235-23351254	MS.gene88586:CDS	50.0%
	CTTGGCACCAACCAACCCAA+TGG	-	chr1.4:23350959-23350978	None:intergenic	55.0%
	GGAGCTTTCGTTGAGACGAG+TGG	+	chr1.4:23349264-23349283	MS.gene88586:CDS	55.0%
!	GAGAAGGTCGGCTTCACCTT+TGG	-	chr1.4:23350888-23350907	None:intergenic	55.0%
!	GCATGGTCTTGGGGACCATT+GGG	+	chr1.4:23350941-23350960	MS.gene88586:CDS	55.0%
!	GCGGCATTTGCATGGTCTTG+GGG	+	chr1.4:23350932-23350951	MS.gene88586:CDS	55.0%
!	TGCATGGTCTTGGGGACCAT+TGG	+	chr1.4:23350940-23350959	MS.gene88586:CDS	55.0%
!!	GCTTTAGAGGTTCGACCAGC+AGG	+	chr1.4:23350989-23351008	MS.gene88586:CDS	55.0%
!!	TTGGGGACCATTGGGTTGGT+TGG	+	chr1.4:23350949-23350968	MS.gene88586:CDS	55.0%
	GGTCTTGGGGACCATTGGGT+TGG	+	chr1.4:23350945-23350964	MS.gene88586:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	23349255	23351282	23349255	ID=MS.gene88586
chr1.4	mRNA	23349255	23351282	23349255	ID=MS.gene88586.t1;Parent=MS.gene88586
chr1.4	exon	23349255	23349713	23349255	ID=MS.gene88586.t1.exon1;Parent=MS.gene88586.t1
chr1.4	CDS	23349255	23349713	23349255	ID=cds.MS.gene88586.t1;Parent=MS.gene88586.t1
chr1.4	exon	23350079	23350702	23350079	ID=MS.gene88586.t1.exon2;Parent=MS.gene88586.t1
chr1.4	CDS	23350079	23350702	23350079	ID=cds.MS.gene88586.t1;Parent=MS.gene88586.t1
chr1.4	exon	23350827	23351282	23350827	ID=MS.gene88586.t1.exon3;Parent=MS.gene88586.t1
chr1.4	CDS	23350827	23351282	23350827	ID=cds.MS.gene88586.t1;Parent=MS.gene88586.t1

Gene Sequence

>MS.gene88586

ATGGGAGCTGGAGCTTTCGTTGAGACGAGTGGAATAAAAAATTATGAGGGAAGAGTGACTCCATATGTGTTAATGACATGTTTTGTAGCTGCAATGGGAGGTCTTCTTTTCGGTTATGATCTTGGTATTACTGGAGGAGTGACTTCTATGGATGAATTCTTGATCAAATTCTTTCCTCGGGTGTATAAAAGAATGAAAGATGAAACACATAATACAAGTCAATATTGTAAATTTGATGATCAAATTTTAACACTATTCACATCTTCCCTATACCTTGCAGCATTGATAGCTTCTTTCTTTGCTTCCACAATCACAAGAATGATGGGACGCAAGGCCTCAATGTTTCTTGGTGGCTTATTCTTCCTTATTGGTGCAATACTAAATGGATTAGCAGCTAACGTTGAAATGCTAATAATTGGTCGTCTACTTCTAGGATTTGGTGTGGGATTTTGCAATCAGGTAAGAACGTTAAAACTCACAAAAATTTAGAAGTTATAATATACACCCTCCGGTCACTATTATAAGCAAAACTTTGTATTTTAAATAATGTATGTGGTCTTTATTATGGACCACATACATCATTTAATGAATGAATCTAAAATACAAAGTTTTGCTTATAATAGTGACCGGAGGGTGTAAAATTCAACACTAGTTTTGTGTAAAGTGTTAGAGACGTTAAATATAGATATTTTTTACCGGCTTCCGCAAAATAAAAGGTTTTACGCGTGTAAGTTTTATCTATTTAATTAAATTTCTTAATATTTTGGAAACCAAATAATTTATAATTAACTAATTTTAGACTTTGTTGTCTATTGTCTAAACAGTCGGTACCAGTGTATTTGTCTGAAATGGCTCCAGCAAAAATTAGAGGAGCACTTAACATTGGCTTCCAAATGATGATTACAATTGGTATCCTAGCCGCAAATCTGATTAATTATGGTACTTCCAAGCATAAAAATGGATGGAGAGTCTCTTTGGGTCTTGGAGCAGTGCCAGCAATTCTTTTGTGTCTAGGATCCCTTTTTTTAGGTGAAACACCCAATTCCTTGATTGAAAGAGGCAACCATGAAAAAGCAAAGGCAATGTTGAAAAGGATCCGCGGAACCGAAAATGTTGATGAAGAATATCAAGATCTTGTTGATGCTAGTGAAGAAGCTAGTAAGGTGGAACATCCATGGAAGAACATTACTCAACCAGAATATAGGCCTCAACTCACTTTCGTCAGTTTTATTCCGTTCTTCCAACAACTTACCGGCATTAATGTTATCATGTTTTACGCTCCCGTCCTTTTTAAGATCTTAGGCTTTGGTGATGATGCTTCCCTCATGTCTGCGGTTATTAGTGGTGGCGTCAATGTTGTTGCTACACTTGTTTCTGTCTTCACAGTAGACAAATTTGGAAGAAGGTTATTATTTCTTGAGGGTGGCTCACAAATGTTTATTTGTCAGGTAAAAATTGACACATTTATTTCTTTTAGATTTTCATACATAACGCTCAAGTTAAACCTATATGTGTGTCCTTGTTTGTATGGAACTGTTCATGTACAGACTATAATTAATCTATGATTTGTAGCTTATTATTGGAATCCTAATTGCATCAAAGTTTGGATTGACCGGACAAGGATCATTTACCAAAGGTGAAGCCGACCTTCTCTTGTTTTTTATTTGTGCATATGTTGCGGCATTTGCATGGTCTTGGGGACCATTGGGTTGGTTGGTGCCAAGTGAAATTTGCGCTTTAGAGGTTCGACCAGCAGGTCAAGCTATAAATGTTGCGGTGAACATGTTCTTCACATTTATGATTGCTCAAGTCTTCCTAACCATGCTTTGTCACTTGAAGTTTGGCCTTTTCTTTTTCTTTGCTGGTTTTGTGGCCATCATGACCGTTTTCATTGCTGTGCTCTTACCCGAGACCAAAAATGTCCCAATTGAAGAAATGAATAGAGTCTGGAAGTCACATTGGTTTTGGACAAAGTATGTTCCTGATCATGTTGTTGGTGGTGGTAATAACAAAAAGGTTGATCCTTGA

Protein sequence

>MS.gene88586.t1

MGAGAFVETSGIKNYEGRVTPYVLMTCFVAAMGGLLFGYDLGITGGVTSMDEFLIKFFPRVYKRMKDETHNTSQYCKFDDQILTLFTSSLYLAALIASFFASTITRMMGRKASMFLGGLFFLIGAILNGLAANVEMLIIGRLLLGFGVGFCNQSVPVYLSEMAPAKIRGALNIGFQMMITIGILAANLINYGTSKHKNGWRVSLGLGAVPAILLCLGSLFLGETPNSLIERGNHEKAKAMLKRIRGTENVDEEYQDLVDASEEASKVEHPWKNITQPEYRPQLTFVSFIPFFQQLTGINVIMFYAPVLFKILGFGDDASLMSAVISGGVNVVATLVSVFTVDKFGRRLLFLEGGSQMFICQLIIGILIASKFGLTGQGSFTKGEADLLLFFICAYVAAFAWSWGPLGWLVPSEICALEVRPAGQAINVAVNMFFTFMIAQVFLTMLCHLKFGLFFFFAGFVAIMTVFIAVLLPETKNVPIEEMNRVWKSHWFWTKYVPDHVVGGGNNKKVDP