AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011944


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011944.t1 MTR_8g077890 93.812 501 6 1 1 476 1 501 0.0 938
MS.gene011944.t1 MTR_5g075300 78.600 500 81 2 1 474 1 500 0.0 803
MS.gene011944.t1 MTR_4g069500 56.907 485 182 3 16 474 27 510 0.0 550
MS.gene011944.t1 MTR_3g116240 56.994 479 178 4 7 459 17 493 0.0 537
MS.gene011944.t1 MTR_4g072030 56.438 466 177 2 16 457 24 487 0.0 528
MS.gene011944.t1 MTR_4g069500 55.965 461 176 3 40 474 1 460 5.90e-180 512
MS.gene011944.t1 MTR_5g019870 52.083 480 204 2 11 464 7 486 5.82e-170 488
MS.gene011944.t1 MTR_6g088450 49.571 466 201 2 8 449 47 502 3.84e-154 448
MS.gene011944.t1 MTR_8g103500 48.755 482 214 4 2 459 1 473 1.03e-148 434
MS.gene011944.t1 MTR_2g013310 45.361 485 226 5 16 476 50 519 1.13e-139 412
MS.gene011944.t1 MTR_7g446340 42.485 499 248 5 2 476 38 521 1.10e-138 409
MS.gene011944.t1 MTR_6g007340 42.485 499 248 5 2 476 38 521 1.10e-138 409
MS.gene011944.t1 MTR_2g013310 44.902 461 215 6 40 476 1 446 4.41e-129 382
MS.gene011944.t1 MTR_4g069500 56.000 325 137 3 152 474 1 321 2.22e-127 373
MS.gene011944.t1 MTR_3g084110 31.743 482 274 9 16 465 25 483 3.60e-66 221
MS.gene011944.t1 MTR_1g116650 31.481 486 272 7 9 465 67 520 4.41e-65 219
MS.gene011944.t1 MTR_1g116660 32.773 476 273 7 16 463 32 488 6.53e-64 215
MS.gene011944.t1 MTR_7g005910 30.864 486 290 8 8 465 20 487 4.00e-63 213
MS.gene011944.t1 MTR_4g077740 28.189 486 301 9 5 454 24 497 2.37e-54 190
MS.gene011944.t1 MTR_3g074410 29.283 502 278 11 12 460 15 492 9.30e-53 186
MS.gene011944.t1 MTR_6g018790 30.968 465 264 9 25 461 111 546 1.66e-52 186
MS.gene011944.t1 MTR_7g082270 30.835 467 262 10 25 461 71 506 8.13e-51 180
MS.gene011944.t1 MTR_5g020270 28.884 457 283 8 22 457 53 488 1.30e-49 177
MS.gene011944.t1 MTR_1g022315 27.233 459 291 8 21 457 51 488 5.64e-49 175
MS.gene011944.t1 MTR_8g077310 28.884 457 277 10 22 454 50 482 7.80e-49 174
MS.gene011944.t1 MTR_0009s0370 31.746 441 248 9 65 474 88 506 7.25e-47 170
MS.gene011944.t1 MTR_4g118610 29.955 444 261 11 34 454 67 483 3.19e-46 167
MS.gene011944.t1 MTR_5g077580 27.106 546 284 9 16 461 23 554 6.24e-46 168
MS.gene011944.t1 MTR_3g008160 28.106 491 283 12 24 466 28 496 2.05e-45 166
MS.gene011944.t1 MTR_5g020270 29.829 409 245 8 70 457 1 388 2.08e-45 163
MS.gene011944.t1 MTR_2g020710 30.211 427 256 10 47 454 77 480 2.36e-45 165
MS.gene011944.t1 MTR_5g041550 28.150 508 293 12 3 460 8 493 4.09e-45 165
MS.gene011944.t1 MTR_3g008170 28.150 508 297 10 7 464 11 500 7.48e-45 164
MS.gene011944.t1 MTR_3g008160 28.837 430 256 9 65 466 40 447 1.21e-44 162
MS.gene011944.t1 MTR_8g077300 26.940 464 295 9 18 459 38 479 1.64e-44 162
MS.gene011944.t1 MTR_8g077310 29.340 409 241 10 70 454 1 385 8.56e-44 159
MS.gene011944.t1 MTR_3g023480 29.858 422 248 7 67 460 90 491 8.96e-44 161
MS.gene011944.t1 MTR_7g113960 27.991 468 290 9 30 476 38 479 9.54e-44 160
MS.gene011944.t1 MTR_3g093010 26.938 516 308 11 5 471 8 503 2.21e-43 160
MS.gene011944.t1 MTR_2g020710 30.488 410 243 10 64 454 5 391 4.40e-43 157
MS.gene011944.t1 MTR_7g094450 28.390 472 293 10 3 454 24 470 5.56e-43 158
MS.gene011944.t1 MTR_3g074390 29.234 431 242 8 65 460 93 495 5.88e-43 159
MS.gene011944.t1 MTR_3g007910 26.465 495 285 10 5 461 8 461 7.46e-43 158
MS.gene011944.t1 MTR_1g022315 27.317 410 255 8 70 457 1 389 8.99e-43 156
MS.gene011944.t1 MTR_5g006070 28.066 424 253 7 59 453 35 435 1.02e-42 157
MS.gene011944.t1 MTR_5g006070 28.066 424 253 7 59 453 83 483 1.48e-42 158
MS.gene011944.t1 MTR_3g093060 28.833 437 262 9 65 472 42 458 2.98e-42 156
MS.gene011944.t1 MTR_7g113970 26.709 468 289 8 15 464 71 502 3.15e-42 157
MS.gene011944.t1 MTR_2g049020 33.141 347 193 6 16 336 23 356 6.64e-42 157
MS.gene011944.t1 MTR_2g049020 33.962 106 70 0 356 461 452 557 1.70e-13 73.2
MS.gene011944.t1 MTR_4g090600 27.757 526 299 14 3 470 8 510 1.48e-41 155
MS.gene011944.t1 MTR_8g102860 27.364 497 295 12 18 469 26 501 1.96e-41 155
MS.gene011944.t1 MTR_5g020270 27.133 457 270 9 22 457 53 467 4.62e-41 153
MS.gene011944.t1 MTR_3g080240 27.137 468 291 9 19 461 93 535 6.02e-41 154
MS.gene011944.t1 MTR_0204s0020 27.146 501 302 12 8 466 9 488 7.35e-41 153
MS.gene011944.t1 MTR_8g102860 28.372 430 263 8 65 469 40 449 1.04e-40 152
MS.gene011944.t1 MTR_0204s0020 26.984 504 302 12 8 466 9 491 1.08e-40 152
MS.gene011944.t1 MTR_4g091370 27.856 499 291 10 7 457 12 489 2.90e-40 152
MS.gene011944.t1 MTR_1g104750 27.975 479 273 11 24 453 28 483 3.98e-40 151
MS.gene011944.t1 MTR_2g048720 33.903 351 190 7 16 340 23 357 5.33e-40 152
MS.gene011944.t1 MTR_7g082270 30.788 406 220 10 25 400 71 445 5.69e-40 150
MS.gene011944.t1 MTR_3g074270 27.235 481 267 10 24 460 28 469 1.19e-39 149
MS.gene011944.t1 MTR_7g094110 28.903 474 288 12 6 454 23 472 1.24e-39 149
MS.gene011944.t1 MTR_1g104780 28.668 443 258 8 65 475 89 505 4.60e-39 148
MS.gene011944.t1 MTR_1g038630 28.689 488 278 12 18 457 22 487 7.28e-39 147
MS.gene011944.t1 MTR_1g104770 29.138 429 251 9 55 453 79 484 7.99e-39 147
MS.gene011944.t1 MTR_6g087040 26.698 427 268 7 65 466 92 498 9.00e-39 147
MS.gene011944.t1 MTR_6g088375 26.698 427 268 7 65 466 92 498 9.00e-39 147
MS.gene011944.t1 MTR_1g038600 28.421 475 278 11 18 457 22 469 1.89e-38 146
MS.gene011944.t1 MTR_0204s0040 26.096 502 304 11 4 460 14 493 4.04e-38 145
MS.gene011944.t1 MTR_4g116770 26.096 502 304 11 4 460 210 689 2.65e-37 145
MS.gene011944.t1 MTR_4g013205 28.976 459 270 14 24 455 41 470 6.63e-36 139
MS.gene011944.t1 MTR_6g087910 27.893 484 288 12 1 455 33 484 1.01e-35 139
MS.gene011944.t1 MTR_2g026160 29.301 372 218 8 7 345 10 369 1.43e-35 139
MS.gene011944.t1 MTR_2g026160 38.095 105 65 0 355 459 454 558 4.96e-16 81.3
MS.gene011944.t1 MTR_4g116790 25.595 504 308 11 2 460 10 491 1.17e-34 136
MS.gene011944.t1 MTR_5g094760 27.254 488 288 12 18 460 26 491 8.35e-34 133
MS.gene011944.t1 MTR_7g091690 26.863 510 306 12 2 466 10 497 9.11e-34 133
MS.gene011944.t1 MTR_5g082540 25.956 497 280 15 18 457 22 487 4.89e-33 131
MS.gene011944.t1 MTR_2g020710 28.933 356 212 9 47 383 77 410 2.99e-32 127
MS.gene011944.t1 MTR_8g077310 27.596 366 225 6 22 368 50 394 5.25e-32 127
MS.gene011944.t1 MTR_2g020710 29.014 355 211 9 47 382 77 409 6.85e-32 127
MS.gene011944.t1 MTR_4g118610 28.272 382 225 10 25 383 58 413 3.28e-31 125
MS.gene011944.t1 MTR_3g074370 30.395 329 185 10 159 471 37 337 1.00e-30 122
MS.gene011944.t1 MTR_3g074340 30.794 315 177 9 159 460 37 323 1.74e-30 121
MS.gene011944.t1 MTR_7g094110 27.119 472 279 11 6 454 23 452 2.73e-30 122
MS.gene011944.t1 MTR_3g074320 30.476 315 178 9 159 460 37 323 5.28e-30 120
MS.gene011944.t1 MTR_2g026140 27.809 356 221 10 7 341 10 350 1.04e-28 119
MS.gene011944.t1 MTR_2g026140 36.190 105 67 0 355 459 439 543 6.73e-12 68.2
MS.gene011944.t1 MTR_4g064820 27.869 366 223 8 7 336 80 440 1.17e-27 115
MS.gene011944.t1 MTR_3g074380 26.836 354 199 8 24 336 31 365 7.82e-26 108
MS.gene011944.t1 MTR_2g020710 28.435 313 184 8 47 340 77 368 2.41e-25 107
MS.gene011944.t1 MTR_3g116060 29.362 235 141 3 17 226 2 236 8.19e-25 108
MS.gene011944.t1 MTR_3g116060 30.315 254 149 8 229 465 487 729 3.46e-21 97.4
MS.gene011944.t1 MTR_3g074400 28.365 416 235 11 65 451 39 420 1.76e-24 105
MS.gene011944.t1 MTR_7g113960 26.970 330 196 7 34 344 46 349 4.53e-24 103
MS.gene011944.t1 MTR_7g113970 25.000 348 209 6 15 344 71 384 3.23e-23 102
MS.gene011944.t1 MTR_5g044910 26.068 234 146 4 23 229 8 241 2.01e-20 95.1
MS.gene011944.t1 MTR_5g044910 30.303 231 127 5 239 451 487 701 8.02e-18 87.0
MS.gene011944.t1 MTR_5g024740 27.350 234 143 4 23 229 8 241 7.31e-20 93.2
MS.gene011944.t1 MTR_5g024740 27.935 247 145 7 222 451 473 703 6.75e-16 80.9
MS.gene011944.t1 MTR_8g073100 27.723 202 118 5 23 197 8 208 1.01e-18 89.7
MS.gene011944.t1 MTR_8g073100 25.225 222 150 3 239 451 485 699 3.18e-14 75.5
MS.gene011944.t1 MTR_3g118530 28.319 226 131 6 30 226 15 238 1.29e-17 86.3
MS.gene011944.t1 MTR_3g118530 26.339 224 145 5 239 451 507 721 3.73e-17 84.7
MS.gene011944.t1 MTR_3g118530 29.592 196 108 5 30 197 15 208 1.62e-17 85.9
MS.gene011944.t1 MTR_4g116790 21.978 364 221 7 2 322 10 353 4.46e-17 83.2
MS.gene011944.t1 MTR_5g096000 29.508 183 122 4 5 183 8 187 1.74e-14 74.7
MS.gene011944.t1 MTR_8g077130 73.333 45 11 1 193 236 38 82 1.45e-11 62.4
MS.gene011944.t1 MTR_5g077590 36.000 100 61 1 349 448 291 387 8.06e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011944.t1 AT4G36670 64.092 479 145 2 16 467 14 492 0.0 625
MS.gene011944.t1 AT2G18480 66.596 473 133 2 9 457 12 483 0.0 607
MS.gene011944.t1 AT3G18830 55.889 467 182 1 16 458 33 499 0.0 550
MS.gene011944.t1 AT2G16120 53.157 491 204 3 7 471 14 504 0.0 523
MS.gene011944.t1 AT2G16130 53.306 484 201 2 7 465 14 497 0.0 522
MS.gene011944.t1 AT2G20780 42.656 497 244 4 4 476 40 519 1.52e-137 406
MS.gene011944.t1 AT2G20780 42.232 457 223 4 44 476 22 461 4.39e-122 365
MS.gene011944.t1 AT2G43330 30.169 474 291 5 16 464 28 486 2.12e-57 198
MS.gene011944.t1 AT1G75220 29.913 458 279 6 21 457 50 486 4.56e-55 191
MS.gene011944.t1 AT5G17010 33.333 411 234 7 69 454 104 499 9.81e-53 186
MS.gene011944.t1 AT5G17010 33.333 411 234 7 69 454 104 499 9.81e-53 186
MS.gene011944.t1 AT5G17010 33.333 411 234 7 69 454 104 499 9.81e-53 186
MS.gene011944.t1 AT5G16150 31.887 461 261 8 25 459 111 544 2.11e-52 186
MS.gene011944.t1 AT5G16150 31.887 461 261 8 25 459 111 544 2.11e-52 186
MS.gene011944.t1 AT5G16150 31.887 461 261 8 25 459 111 544 2.11e-52 186
MS.gene011944.t1 AT3G03090 31.707 451 265 10 34 454 62 499 5.23e-51 181
MS.gene011944.t1 AT5G27350 28.908 467 287 7 21 465 29 472 5.99e-51 180
MS.gene011944.t1 AT3G05160 28.125 480 294 8 1 458 5 455 1.18e-50 179
MS.gene011944.t1 AT1G19450 28.850 461 282 7 20 457 50 487 1.04e-49 177
MS.gene011944.t1 AT5G26250 28.974 497 290 10 1 454 4 480 2.26e-49 176
MS.gene011944.t1 AT5G27360 27.902 491 293 10 2 465 20 476 8.35e-49 174
MS.gene011944.t1 AT3G05150 31.545 466 261 14 25 460 37 474 2.09e-48 173
MS.gene011944.t1 AT5G27360 27.902 491 293 10 2 465 68 524 3.18e-48 174
MS.gene011944.t1 AT5G18840 28.870 478 294 10 7 461 28 482 7.30e-48 172
MS.gene011944.t1 AT5G59250 28.755 466 282 8 24 454 103 553 1.19e-47 173
MS.gene011944.t1 AT3G05150 31.441 458 258 13 25 454 37 466 1.32e-47 171
MS.gene011944.t1 AT3G05150 31.441 458 258 13 25 454 37 466 1.32e-47 171
MS.gene011944.t1 AT3G05165 27.733 494 284 10 1 461 14 467 2.72e-47 170
MS.gene011944.t1 AT3G05165 27.733 494 284 10 1 461 14 467 2.72e-47 170
MS.gene011944.t1 AT3G05165 27.733 494 284 10 1 461 14 467 2.72e-47 170
MS.gene011944.t1 AT1G11260 28.484 488 276 13 20 457 25 489 4.19e-47 171
MS.gene011944.t1 AT3G05960 30.233 473 281 13 18 454 20 479 6.09e-46 167
MS.gene011944.t1 AT1G50310 26.978 493 285 13 24 465 30 498 1.68e-45 166
MS.gene011944.t1 AT3G05160 28.505 428 265 6 49 458 2 406 1.04e-44 162
MS.gene011944.t1 AT3G05160 28.505 428 265 6 49 458 2 406 1.04e-44 162
MS.gene011944.t1 AT4G02050 27.634 503 297 11 9 466 17 497 1.12e-43 161
MS.gene011944.t1 AT4G02050 27.634 503 297 11 9 466 17 497 1.12e-43 161
MS.gene011944.t1 AT3G19930 28.806 427 243 9 65 457 88 487 1.20e-43 161
MS.gene011944.t1 AT3G19930 28.806 427 243 9 65 457 88 487 1.20e-43 161
MS.gene011944.t1 AT1G08900 27.629 485 286 12 7 461 13 462 1.63e-43 159
MS.gene011944.t1 AT1G08900 27.629 485 286 12 7 461 13 462 1.63e-43 159
MS.gene011944.t1 AT1G54730 28.785 469 287 11 7 454 20 462 1.77e-43 160
MS.gene011944.t1 AT3G19940 27.926 487 277 11 24 460 30 492 2.10e-43 160
MS.gene011944.t1 AT1G08900 28.539 445 253 12 47 461 11 420 3.21e-43 158
MS.gene011944.t1 AT1G08900 28.539 445 253 12 47 461 45 454 4.41e-43 158
MS.gene011944.t1 AT5G26340 28.454 485 279 11 24 460 28 492 2.01e-42 158
MS.gene011944.t1 AT1G08930 27.778 468 293 13 7 454 46 488 2.17e-42 157
MS.gene011944.t1 AT1G08930 27.778 468 293 13 7 454 46 488 2.17e-42 157
MS.gene011944.t1 AT1G30220 35.795 352 177 9 16 336 25 358 2.91e-42 158
MS.gene011944.t1 AT1G30220 37.755 98 61 0 364 461 463 560 4.16e-15 78.2
MS.gene011944.t1 AT4G21480 27.455 499 295 11 6 457 9 487 8.23e-42 155
MS.gene011944.t1 AT4G04750 27.828 442 264 10 47 462 64 476 9.06e-42 155
MS.gene011944.t1 AT4G04750 27.828 442 264 10 47 462 64 476 9.06e-42 155
MS.gene011944.t1 AT1G77210 27.921 505 286 13 18 471 26 503 1.75e-41 155
MS.gene011944.t1 AT1G77210 27.921 505 286 13 18 471 26 503 1.75e-41 155
MS.gene011944.t1 AT4G04750 27.828 442 264 10 47 462 108 520 1.99e-41 155
MS.gene011944.t1 AT5G23270 27.220 518 287 14 2 460 7 493 7.17e-41 153
MS.gene011944.t1 AT1G05030 28.000 475 280 11 19 462 79 522 4.07e-40 151
MS.gene011944.t1 AT1G08890 27.912 455 273 11 25 454 33 457 5.78e-39 147
MS.gene011944.t1 AT2G48020 27.824 478 282 12 6 456 19 460 8.76e-39 147
MS.gene011944.t1 AT2G48020 27.824 478 282 12 6 456 19 460 8.76e-39 147
MS.gene011944.t1 AT3G05165 26.626 492 277 10 1 459 14 454 3.37e-38 146
MS.gene011944.t1 AT1G67300 29.209 493 285 13 1 460 32 493 3.82e-38 145
MS.gene011944.t1 AT5G61520 26.306 517 301 14 1 460 1 494 4.96e-38 145
MS.gene011944.t1 AT1G67300 28.947 494 284 14 1 460 32 492 8.60e-38 144
MS.gene011944.t1 AT1G67300 28.947 494 284 14 1 460 32 492 8.60e-38 144
MS.gene011944.t1 AT1G54730 28.638 426 258 10 7 411 20 420 2.73e-37 142
MS.gene011944.t1 AT5G61520 26.959 434 267 8 65 471 47 457 6.73e-37 141
MS.gene011944.t1 AT1G07340 27.651 481 278 12 20 453 24 481 9.26e-37 142
MS.gene011944.t1 AT5G27360 27.387 398 242 7 89 465 1 372 1.47e-36 139
MS.gene011944.t1 AT5G27360 27.387 398 242 7 89 465 1 372 1.47e-36 139
MS.gene011944.t1 AT3G05155 26.338 467 296 7 8 454 17 455 2.19e-36 140
MS.gene011944.t1 AT4G04760 25.268 467 286 9 18 460 43 470 2.53e-36 140
MS.gene011944.t1 AT1G54730 27.505 469 272 12 7 454 20 441 2.91e-36 139
MS.gene011944.t1 AT3G05165 27.570 428 238 9 1 395 14 402 3.42e-36 139
MS.gene011944.t1 AT3G05165 27.570 428 238 9 1 395 14 402 3.42e-36 139
MS.gene011944.t1 AT1G34580 27.572 486 283 11 24 460 29 494 3.77e-36 140
MS.gene011944.t1 AT4G04760 25.459 436 275 7 49 460 2 411 3.84e-36 139
MS.gene011944.t1 AT1G79820 29.436 479 278 14 6 455 41 488 5.01e-36 139
MS.gene011944.t1 AT1G79820 29.436 479 278 14 6 455 41 488 5.01e-36 139
MS.gene011944.t1 AT2G35740 31.792 346 198 9 18 336 25 359 7.60e-36 140
MS.gene011944.t1 AT2G35740 37.374 99 62 0 356 454 458 556 7.76e-14 74.3
MS.gene011944.t1 AT1G34580 28.471 425 256 8 65 460 39 444 8.67e-36 138
MS.gene011944.t1 AT1G05030 27.253 455 269 11 39 462 47 470 4.19e-35 137
MS.gene011944.t1 AT4G16480 30.303 363 212 8 5 336 8 360 1.07e-34 137
MS.gene011944.t1 AT4G16480 37.374 99 62 0 356 454 459 557 1.47e-14 76.6
MS.gene011944.t1 AT4G16480 30.303 363 212 8 5 336 8 360 1.07e-34 137
MS.gene011944.t1 AT4G16480 37.374 99 62 0 356 454 459 557 1.47e-14 76.6
MS.gene011944.t1 AT4G16480 30.303 363 212 8 5 336 8 360 1.07e-34 137
MS.gene011944.t1 AT4G16480 37.374 99 62 0 356 454 459 557 1.47e-14 76.6
MS.gene011944.t1 AT1G08900 27.021 433 256 10 7 411 13 413 8.75e-34 132
MS.gene011944.t1 AT5G27360 26.859 417 245 9 2 391 20 403 1.71e-33 131
MS.gene011944.t1 AT1G67300 29.263 434 240 14 1 400 32 432 2.58e-33 131
MS.gene011944.t1 AT1G67300 29.263 434 240 14 1 400 32 432 2.58e-33 131
MS.gene011944.t1 AT1G67300 29.647 425 232 14 1 391 32 423 7.04e-33 129
MS.gene011944.t1 AT1G67300 29.647 425 232 14 1 391 32 423 7.04e-33 129
MS.gene011944.t1 AT1G08920 25.630 476 305 12 8 459 17 467 3.29e-32 128
MS.gene011944.t1 AT1G54730 29.219 397 237 11 7 383 20 392 8.31e-32 126
MS.gene011944.t1 AT1G54730 29.219 397 237 11 7 383 20 392 8.31e-32 126
MS.gene011944.t1 AT4G04760 24.468 470 283 10 18 460 43 467 3.50e-31 125
MS.gene011944.t1 AT1G08920 25.466 483 304 13 8 459 17 474 7.19e-31 125
MS.gene011944.t1 AT3G05400 23.355 471 317 8 8 459 16 461 9.74e-31 124
MS.gene011944.t1 AT1G79820 29.454 421 243 12 6 400 41 433 2.19e-30 123
MS.gene011944.t1 AT1G54730 26.995 426 244 11 7 411 20 399 2.60e-30 122
MS.gene011944.t1 AT1G50310 26.503 366 214 11 131 465 14 355 5.23e-30 120
MS.gene011944.t1 AT1G77210 27.660 376 215 9 127 471 5 354 1.21e-29 119
MS.gene011944.t1 AT3G20460 22.998 487 309 14 2 459 39 488 5.03e-27 114
MS.gene011944.t1 AT5G17010 28.224 411 191 9 69 454 105 436 5.12e-27 113
MS.gene011944.t1 AT3G05400 22.669 472 301 9 7 459 15 441 4.18e-26 110
MS.gene011944.t1 AT1G08920 25.234 428 272 11 8 411 17 420 4.75e-26 110
MS.gene011944.t1 AT1G54730 27.456 397 223 12 7 383 20 371 6.44e-25 106
MS.gene011944.t1 AT1G20840 28.340 247 146 5 17 236 2 244 3.81e-24 106
MS.gene011944.t1 AT1G20840 28.295 258 157 6 229 471 489 733 1.01e-16 83.6
MS.gene011944.t1 AT1G20840 28.340 247 146 5 17 236 2 244 3.81e-24 106
MS.gene011944.t1 AT1G20840 28.295 258 157 6 229 471 489 733 1.01e-16 83.6
MS.gene011944.t1 AT1G54730 27.761 335 201 8 7 322 20 332 3.53e-23 100
MS.gene011944.t1 AT3G51490 26.693 251 142 7 23 233 8 256 1.45e-22 101
MS.gene011944.t1 AT3G51490 29.961 257 155 8 224 467 486 730 2.29e-21 97.8
MS.gene011944.t1 AT3G51490 26.693 251 142 7 23 233 8 256 1.50e-22 101
MS.gene011944.t1 AT3G51490 29.839 248 159 6 224 467 486 722 1.85e-19 92.0
MS.gene011944.t1 AT3G51490 29.961 257 155 8 224 467 436 680 2.06e-21 98.2
MS.gene011944.t1 AT3G51490 28.866 194 102 5 76 233 13 206 9.46e-18 86.7
MS.gene011944.t1 AT2G48020 26.882 372 213 10 6 350 19 358 4.76e-21 95.1
MS.gene011944.t1 AT3G05155 25.223 337 205 6 8 324 17 326 8.28e-21 93.6
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.10e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 456 727 2.96e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.13e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 446 717 2.77e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.13e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 446 717 2.77e-20 94.7
MS.gene011944.t1 AT4G35300 29.082 196 109 5 30 197 15 208 1.13e-20 95.9
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 446 717 2.77e-20 94.7
MS.gene011944.t1 AT4G35300 27.682 289 179 7 183 458 259 530 3.62e-20 94.0
MS.gene011944.t1 AT1G54730 27.575 301 181 7 7 288 20 302 6.75e-20 90.9
MS.gene011944.t1 AT1G54730 27.575 301 181 7 7 288 20 302 6.75e-20 90.9
MS.gene011944.t1 AT2G48020 26.087 345 198 9 6 325 19 331 3.53e-18 86.3
MS.gene011944.t1 AT1G79820 29.439 214 123 6 6 193 41 252 1.03e-13 73.6

Find 96 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATGGTGTCCATCGTTTC+TGG 0.167687 8.2:+27492730 MS.gene011944:CDS
AAAGCTTTGCCTTTAGTTTC+AGG 0.224380 8.2:-27495194 None:intergenic
TATGTTGCTTTCTTTAATAT+TGG 0.239121 8.2:+27494957 MS.gene011944:CDS
GTTGTTCATAAAGGAAGATT+TGG 0.239451 8.2:+27493924 MS.gene011944:CDS
ATGTTGCTTTCTTTAATATT+GGG 0.247224 8.2:+27494958 MS.gene011944:CDS
CATCCTTGGTGCAGGTCTAA+TGG 0.255622 8.2:+27494080 MS.gene011944:CDS
ACCATTAAAATCGCGTAGTT+TGG 0.273263 8.2:-27494111 None:intergenic
GATTATTGGGCTTACGCTAT+TGG 0.276072 8.2:+27494854 MS.gene011944:CDS
AGCACCGGAGGAATGATTAT+TGG 0.277723 8.2:+27494840 MS.gene011944:CDS
GTGTCCATCGTTTCTGGTTA+TGG 0.291709 8.2:+27492736 MS.gene011944:CDS
GCTTTCTTTAATATTGGGCT+TGG 0.305984 8.2:+27494963 MS.gene011944:CDS
GAACTATAAACCCAAGTAAT+AGG 0.312160 8.2:-27494987 None:intergenic
ATCCTTGGTGCAGGTCTAAT+GGG 0.322241 8.2:+27494081 MS.gene011944:CDS
TTGGGCTTGGGCCTATTACT+TGG 0.331261 8.2:+27494976 MS.gene011944:CDS
ATTGGTATTGGAATCTTGTT+AGG 0.334944 8.2:+27494252 MS.gene011944:CDS
CCTGAACTTTGTATTGGTAT+TGG 0.335903 8.2:+27494240 MS.gene011944:CDS
AACTAAAGGCAAAGCTTTAG+AGG 0.338165 8.2:+27495199 MS.gene011944:CDS
GCACCGGAGGAATGATTATT+GGG 0.356340 8.2:+27494841 MS.gene011944:CDS
ATTATTGGGCTTACGCTATT+GGG 0.356624 8.2:+27494855 MS.gene011944:CDS
CTCACCAAGGTGAAGGGGTT+TGG 0.362291 8.2:+27494562 MS.gene011944:CDS
AGGCAAAGCTTTAGAGGAAA+TGG 0.362549 8.2:+27495205 MS.gene011944:CDS
CATGGAAACAACAGCATTCA+TGG 0.369966 8.2:-27495072 None:intergenic
AGAGGTTCTTCCTGCTGTTA+AGG 0.375363 8.2:-27494010 None:intergenic
CTTTCTTTAATATTGGGCTT+GGG 0.375420 8.2:+27494964 MS.gene011944:CDS
GCCTCAATATTGTTCATCCT+TGG 0.375575 8.2:+27494066 MS.gene011944:CDS
TTGTTCATAAAGGAAGATTT+GGG 0.381071 8.2:+27493925 MS.gene011944:CDS
GGACACCATTGAAGCAACTA+TGG 0.409338 8.2:-27492719 None:intergenic
TTGTGCCATAGTTGCTTCAA+TGG 0.411172 8.2:+27492714 MS.gene011944:CDS
ATTTGTTGAACGTGTTCGTT+TGG 0.417351 8.2:-27492681 None:intergenic
TCTTTGCCTGAACTTTGTAT+TGG 0.418955 8.2:+27494234 MS.gene011944:CDS
TGGGCTTGGGCCTATTACTT+GGG 0.420201 8.2:+27494977 MS.gene011944:CDS
GATATTTCCTTTGAAGTTGA+GGG 0.420965 8.2:+27495013 MS.gene011944:CDS
GGAAGATGTGTTTGTGGTGT+AGG 0.426049 8.2:+27494135 MS.gene011944:CDS
TGGAGCAATGTTGTTCATAA+AGG 0.432311 8.2:+27493915 MS.gene011944:CDS
GAAATTTCAGCTGAATAAAC+CGG 0.433520 8.2:-27494183 None:intergenic
CCAATACCAATACAAAGTTC+AGG 0.435753 8.2:-27494240 None:intergenic
GGCCCATAAAACATTTCCAT+TGG 0.444837 8.2:-27494904 None:intergenic
ATCTATAAAGCTATCACAAT+AGG 0.446017 8.2:+27495107 MS.gene011944:CDS
TTGGTTATGCAAGGTCAATT+AGG 0.450727 8.2:+27494408 MS.gene011944:CDS
ACATACTAGACCTTCTGTAT+TGG 0.463685 8.2:-27495281 None:intergenic
TTAAACCTATGTGCATTAGT+AGG 0.465555 8.2:+27493985 MS.gene011944:CDS
ATTTCTTCTGCTTCATCAAG+AGG 0.475582 8.2:+27494201 MS.gene011944:CDS
ATATTGTTCATCCTTGGTGC+AGG 0.483894 8.2:+27494072 MS.gene011944:CDS
TGTGTTTGTGGTGTAGGTGT+TGG 0.486277 8.2:+27494141 MS.gene011944:CDS
CGTATGTTGCGACGATGCTA+AGG 0.499758 8.2:-27494932 None:intergenic
GGTGCAGGTCTAATGGGGTA+TGG 0.502064 8.2:+27494087 MS.gene011944:CDS
GGAAGAACCTCTGATTACAT+TGG 0.503581 8.2:+27494021 MS.gene011944:CDS
CAAAACGCTACTACAAATGA+AGG 0.504432 8.2:-27494354 None:intergenic
CCTTTGAAGTTGAGGGCACA+AGG 0.507181 8.2:+27495020 MS.gene011944:CDS
AGATATTTCCTTTGAAGTTG+AGG 0.507195 8.2:+27495012 MS.gene011944:CDS
GAAGAACCTCTGATTACATT+GGG 0.508270 8.2:+27494022 MS.gene011944:CDS
ATCATCATGATAACAAATCA+AGG 0.511062 8.2:+27492646 None:intergenic
TTACTTGCAACTATTGGAGT+AGG 0.513606 8.2:+27494741 MS.gene011944:CDS
CAAAAGTCTCACCAAGGTGA+AGG 0.519691 8.2:+27494555 MS.gene011944:CDS
ATGGTTGGAAGATGTGTTTG+TGG 0.525527 8.2:+27494129 MS.gene011944:CDS
ACCAACCACCTTGGTGACTC+AGG 0.530664 8.2:-27494390 None:intergenic
ATAGATTGAAATAAAAGTCA+TGG 0.531568 8.2:-27495090 None:intergenic
AGGGCACAAGGAGCAAGTAT+TGG 0.532018 8.2:+27495032 MS.gene011944:CDS
CTTTCCAAACCCCTTCACCT+TGG 0.537035 8.2:-27494566 None:intergenic
TTAGATACTGGTGTTATGAG+TGG 0.541644 8.2:+27493895 MS.gene011944:intron
AAAAGTCTCACCAAGGTGAA+GGG 0.542978 8.2:+27494556 MS.gene011944:CDS
CTTTGCTCTTATGATAGCAC+CGG 0.543480 8.2:+27494164 MS.gene011944:CDS
CCTTGTGCCCTCAACTTCAA+AGG 0.544461 8.2:-27495020 None:intergenic
AAGCCCAATAATCATTCCTC+CGG 0.546220 8.2:-27494844 None:intergenic
TATAAAGCTATCACAATAGG+TGG 0.548135 8.2:+27495110 MS.gene011944:CDS
AGCTTTAGAGGAAATGGAGA+TGG 0.549739 8.2:+27495211 MS.gene011944:CDS
AGCAACTATGGCACAAGCAA+AGG 0.549760 8.2:-27492707 None:intergenic
CTTTGCCTTTAGTTTCAGGA+AGG 0.554311 8.2:-27495190 None:intergenic
TGCGACGATGCTAAGGATCA+AGG 0.554761 8.2:-27494925 None:intergenic
TTAGTAGGATCCTTAACAGC+AGG 0.560031 8.2:+27494000 MS.gene011944:CDS
TGGATGTTAATTGCTGCGGT+TGG 0.560539 8.2:+27494621 MS.gene011944:CDS
GACCAACGCCTTCTGTACGT+TGG 0.561189 8.2:+27494601 MS.gene011944:CDS
AGAAGCAGAACTTCGTCTCA+AGG 0.568665 8.2:+27494473 MS.gene011944:CDS
TAACATAACAGCTTCAATAC+CGG 0.576140 8.2:-27494667 None:intergenic
GCCTGAGTCACCAAGGTGGT+TGG 0.581783 8.2:+27494389 MS.gene011944:CDS
ACACAACAAGAGGTTCTAGC+AGG 0.599568 8.2:+27493958 MS.gene011944:CDS
AGAAATGGATCCAATACAGA+AGG 0.599938 8.2:+27495271 MS.gene011944:CDS
CCAAGGTGGTTGGTTATGCA+AGG 0.600557 8.2:+27494399 MS.gene011944:CDS
AATACAAAGTTCAGGCAAAG+AGG 0.601400 8.2:-27494232 None:intergenic
CCTTGCATAACCAACCACCT+TGG 0.601505 8.2:-27494399 None:intergenic
ACCAAGGATGAACAATATTG+AGG 0.606197 8.2:-27494067 None:intergenic
ATTAACATCCAACGTACAGA+AGG 0.606833 8.2:-27494609 None:intergenic
TCCTTGGTGCAGGTCTAATG+GGG 0.608348 8.2:+27494082 MS.gene011944:CDS
AGGATCCTACTAATGCACAT+AGG 0.612414 8.2:-27493990 None:intergenic
ACTGTGGTAGATAAATCCAA+TGG 0.612575 8.2:+27494888 MS.gene011944:CDS
AAAGTCTCACCAAGGTGAAG+GGG 0.615900 8.2:+27494557 MS.gene011944:CDS
AATCAGTGACACACAACAAG+AGG 0.616657 8.2:+27493948 MS.gene011944:CDS
GCGACGCCCAATGTAATCAG+AGG 0.660739 8.2:-27494028 None:intergenic
ATTGGGTCTTAGCTTGACTG+TGG 0.661644 8.2:+27494872 MS.gene011944:CDS
CGTACCATAACCAGAAACGA+TGG 0.664147 8.2:-27492740 None:intergenic
TAACGATGCCTGAGTCACCA+AGG 0.664266 8.2:+27494382 MS.gene011944:CDS
ATCCAACGTACAGAAGGCGT+TGG 0.670561 8.2:-27494603 None:intergenic
ACGTTGGATGTTAATTGCTG+CGG 0.688098 8.2:+27494617 MS.gene011944:CDS
ACCCCATTAGACCTGCACCA+AGG 0.701724 8.2:-27494083 None:intergenic
TTACCTCAAAAGTCTCACCA+AGG 0.718107 8.2:+27494549 MS.gene011944:CDS
CGATGCCTGAGTCACCAAGG+TGG 0.754222 8.2:+27494385 MS.gene011944:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAAATAAAATTAAAAG+TGG - chr8.2:27492791-27492810 None:intergenic 10.0%
!! CAAAAGAAAAAAAAAATTAT+TGG - chr8.2:27492839-27492858 None:intergenic 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+AGG - chr8.2:27493356-27493375 None:intergenic 10.0%
!!! TAAGTAAAAAAACTTTTTTT+AGG - chr8.2:27492991-27493010 None:intergenic 10.0%
!!! TATATATCAAACTATTTTTT+GGG + chr8.2:27494276-27494295 MS.gene011944:intron 10.0%
!!! TTATATATCAAACTATTTTT+TGG + chr8.2:27494275-27494294 MS.gene011944:intron 10.0%
!! AAAATGAAAAAATTGAATAG+AGG + chr8.2:27493157-27493176 MS.gene011944:intron 15.0%
!! AAATTGCATTGAAAATTAAA+TGG - chr8.2:27493651-27493670 None:intergenic 15.0%
!! AATAAATTAACTTCAAGAAA+AGG - chr8.2:27493201-27493220 None:intergenic 15.0%
!! ATTTCATTCATAATAAAAGA+AGG + chr8.2:27493266-27493285 MS.gene011944:intron 15.0%
!! TATGTATATTATTCTCAATA+AGG + chr8.2:27493704-27493723 MS.gene011944:intron 15.0%
!!! AAGAACAAATTTTTTGTTTT+CGG + chr8.2:27493533-27493552 MS.gene011944:intron 15.0%
!!! AATTTGAGTTTTTTATTTTG+AGG + chr8.2:27493308-27493327 MS.gene011944:intron 15.0%
!!! ATTATAAACGAAAAACTTTT+AGG + chr8.2:27492912-27492931 MS.gene011944:intron 15.0%
!!! ATTTGAGTTTTTTATTTTGA+GGG + chr8.2:27493309-27493328 MS.gene011944:intron 15.0%
!!! TTGAAGTTAATTTATTTTGA+GGG + chr8.2:27493205-27493224 MS.gene011944:intron 15.0%
!!! TTTTTACTTATATTAATGAC+CGG + chr8.2:27493001-27493020 MS.gene011944:intron 15.0%
!! AAAAAAAAAAGTTTAGTGAC+CGG + chr8.2:27493364-27493383 MS.gene011944:intron 20.0%
!! ATAGATTGAAATAAAAGTCA+TGG - chr8.2:27495093-27495112 None:intergenic 20.0%
!! TATTCTCAATAAGGATAATT+TGG + chr8.2:27493713-27493732 MS.gene011944:intron 20.0%
!! TTGAGTCAAAAAAATATTTG+TGG - chr8.2:27493057-27493076 None:intergenic 20.0%
!! TTTGAGTAAGCAAAATATAT+TGG - chr8.2:27493466-27493485 None:intergenic 20.0%
!!! AAATATTTGAGTTTGAAACT+TGG + chr8.2:27494300-27494319 MS.gene011944:intron 20.0%
!!! ACATGATTAATTTTAGATAC+TGG + chr8.2:27493883-27493902 MS.gene011944:intron 20.0%
!!! ATGTTGCTTTCTTTAATATT+GGG + chr8.2:27494958-27494977 MS.gene011944:CDS 20.0%
!!! ATTTTTACCACTTGATTTTT+TGG - chr8.2:27495243-27495262 None:intergenic 20.0%
!!! CTTGAAGTTAATTTATTTTG+AGG + chr8.2:27493204-27493223 MS.gene011944:intron 20.0%
!!! TATGTTGCTTTCTTTAATAT+TGG + chr8.2:27494957-27494976 MS.gene011944:CDS 20.0%
!!! TTTTCGTTTATAATTGTGAT+CGG - chr8.2:27492906-27492925 None:intergenic 20.0%
!!! TTTTTTTTTTTTGAAGGAAC+CGG - chr8.2:27493350-27493369 None:intergenic 20.0%
! AAAATCAAGTGGTAAAAATG+TGG + chr8.2:27495244-27495263 MS.gene011944:CDS 25.0%
! AATACGATGCTTATTTAAGA+CGG + chr8.2:27493798-27493817 MS.gene011944:intron 25.0%
! AATATGCACTTAAACAACAA+GGG - chr8.2:27493400-27493419 None:intergenic 25.0%
! ACAAAAACATGAATGTAACT+AGG + chr8.2:27493093-27493112 MS.gene011944:intron 25.0%
! ATCTATAAAGCTATCACAAT+AGG + chr8.2:27495107-27495126 MS.gene011944:CDS 25.0%
! CATTTAACAATTAGTGTATG+TGG + chr8.2:27492937-27492956 MS.gene011944:intron 25.0%
! GTGGTTAATTGAACTTTATA+TGG + chr8.2:27493128-27493147 MS.gene011944:intron 25.0%
! TAAAAATGTGGCAATAGAAA+TGG + chr8.2:27495256-27495275 MS.gene011944:CDS 25.0%
! TTGTTCATAAAGGAAGATTT+GGG + chr8.2:27493925-27493944 MS.gene011944:CDS 25.0%
!! AATCCAATGGAAATGTTTTA+TGG + chr8.2:27494901-27494920 MS.gene011944:CDS 25.0%
!! ATCCAATGGAAATGTTTTAT+GGG + chr8.2:27494902-27494921 MS.gene011944:CDS 25.0%
!! GTTTTTACCAAAAAATCAAG+TGG + chr8.2:27495233-27495252 MS.gene011944:CDS 25.0%
!! TTCAAACGTGAAACTTATTT+TGG - chr8.2:27493598-27493617 None:intergenic 25.0%
!!! TCAAACGTGAAACTTATTTT+GGG - chr8.2:27493597-27493616 None:intergenic 25.0%
!!! TTGTTTTTACTTGACAAACT+TGG + chr8.2:27494795-27494814 MS.gene011944:CDS 25.0%
AAATATTTGTGGCTACTTGA+AGG - chr8.2:27493046-27493065 None:intergenic 30.0%
ATATGCACTTAAACAACAAG+GGG - chr8.2:27493399-27493418 None:intergenic 30.0%
CAATATGCACTTAAACAACA+AGG - chr8.2:27493401-27493420 None:intergenic 30.0%
CTTTCTTTAATATTGGGCTT+GGG + chr8.2:27494964-27494983 MS.gene011944:CDS 30.0%
GAAATTTCAGCTGAATAAAC+CGG - chr8.2:27494186-27494205 None:intergenic 30.0%
GAACTATAAACCCAAGTAAT+AGG - chr8.2:27494990-27495009 None:intergenic 30.0%
GTTGTTCATAAAGGAAGATT+TGG + chr8.2:27493924-27493943 MS.gene011944:CDS 30.0%
TAACATAACAGCTTCAATAC+CGG - chr8.2:27494670-27494689 None:intergenic 30.0%
TATAAAGCTATCACAATAGG+TGG + chr8.2:27495110-27495129 MS.gene011944:CDS 30.0%
TCACAAATAAAACACAGACA+TGG + chr8.2:27493830-27493849 MS.gene011944:intron 30.0%
TTAAACCTATGTGCATTAGT+AGG + chr8.2:27493985-27494004 MS.gene011944:CDS 30.0%
TTACTTATATTAATGACCGG+AGG + chr8.2:27493004-27493023 MS.gene011944:intron 30.0%
! AAGCTTTTACTTGCAACTAT+TGG + chr8.2:27494735-27494754 MS.gene011944:CDS 30.0%
! ATACGATGCTTATTTAAGAC+GGG + chr8.2:27493799-27493818 MS.gene011944:intron 30.0%
! ATTGGTATTGGAATCTTGTT+AGG + chr8.2:27494252-27494271 MS.gene011944:CDS 30.0%
! ATTTGAGTTTGAAACTTGGT+TGG + chr8.2:27494304-27494323 MS.gene011944:intron 30.0%
! CCAAGAATTTTCAAAAAAGC+AGG + chr8.2:27494696-27494715 MS.gene011944:CDS 30.0%
! TTTTTCCTTCCTGAAACTAA+AGG + chr8.2:27495185-27495204 MS.gene011944:CDS 30.0%
!! AGATATTTCCTTTGAAGTTG+AGG + chr8.2:27495012-27495031 MS.gene011944:CDS 30.0%
!! GATATTTCCTTTGAAGTTGA+GGG + chr8.2:27495013-27495032 MS.gene011944:CDS 30.0%
!!! AACTAGGTATTGTTTTTACG+TGG + chr8.2:27493109-27493128 MS.gene011944:intron 30.0%
!!! CCTGCTTTTTTGAAAATTCT+TGG - chr8.2:27494699-27494718 None:intergenic 30.0%
!!! GTTTTTGTTTCTGATTTGTG+TGG - chr8.2:27493081-27493100 None:intergenic 30.0%
AAGGATATAAAAATCGCTGC+TGG + chr8.2:27494492-27494511 MS.gene011944:CDS 35.0%
AATACAAAGTTCAGGCAAAG+AGG - chr8.2:27494235-27494254 None:intergenic 35.0%
ACCAAGGATGAACAATATTG+AGG - chr8.2:27494070-27494089 None:intergenic 35.0%
ACCATTAAAATCGCGTAGTT+TGG - chr8.2:27494114-27494133 None:intergenic 35.0%
ACTGTGGTAGATAAATCCAA+TGG + chr8.2:27494888-27494907 MS.gene011944:CDS 35.0%
AGAAATGGATCCAATACAGA+AGG + chr8.2:27495271-27495290 MS.gene011944:CDS 35.0%
ATGTTAGTTGATCCCACTTA+GGG - chr8.2:27493563-27493582 None:intergenic 35.0%
ATTAACATCCAACGTACAGA+AGG - chr8.2:27494612-27494631 None:intergenic 35.0%
ATTATTGGGCTTACGCTATT+GGG + chr8.2:27494855-27494874 MS.gene011944:CDS 35.0%
ATTTCTTCTGCTTCATCAAG+AGG + chr8.2:27494201-27494220 MS.gene011944:CDS 35.0%
CAAAACGCTACTACAAATGA+AGG - chr8.2:27494357-27494376 None:intergenic 35.0%
CCAATACCAATACAAAGTTC+AGG - chr8.2:27494243-27494262 None:intergenic 35.0%
GAAGAACCTCTGATTACATT+GGG + chr8.2:27494022-27494041 MS.gene011944:CDS 35.0%
GCTTTCTTTAATATTGGGCT+TGG + chr8.2:27494963-27494982 MS.gene011944:CDS 35.0%
TATGTTAGTTGATCCCACTT+AGG - chr8.2:27493564-27493583 None:intergenic 35.0%
TCGATGAGTAAGTAAGGTAT+GGG - chr8.2:27492967-27492986 None:intergenic 35.0%
TCGTTTATAATTGTGATCGG+AGG - chr8.2:27492903-27492922 None:intergenic 35.0%
TCTTTGCCTGAACTTTGTAT+TGG + chr8.2:27494234-27494253 MS.gene011944:CDS 35.0%
TGGAGCAATGTTGTTCATAA+AGG + chr8.2:27493915-27493934 MS.gene011944:CDS 35.0%
TTACTTGCAACTATTGGAGT+AGG + chr8.2:27494741-27494760 MS.gene011944:CDS 35.0%
TTAGGTTCGATGAGTAAGTA+AGG - chr8.2:27492973-27492992 None:intergenic 35.0%
TTCGATGAGTAAGTAAGGTA+TGG - chr8.2:27492968-27492987 None:intergenic 35.0%
TTGGTTATGCAAGGTCAATT+AGG + chr8.2:27494408-27494427 MS.gene011944:CDS 35.0%
! AAAGCTTTGCCTTTAGTTTC+AGG - chr8.2:27495197-27495216 None:intergenic 35.0%
! AACTAAAGGCAAAGCTTTAG+AGG + chr8.2:27495199-27495218 MS.gene011944:CDS 35.0%
! AGACTTTTGCAAATTAGCAC+CGG + chr8.2:27494825-27494844 MS.gene011944:CDS 35.0%
! ATTTGTTGAACGTGTTCGTT+TGG - chr8.2:27492684-27492703 None:intergenic 35.0%
! CCTGAACTTTGTATTGGTAT+TGG + chr8.2:27494240-27494259 MS.gene011944:CDS 35.0%
! TACGATGCTTATTTAAGACG+GGG + chr8.2:27493800-27493819 MS.gene011944:intron 35.0%
! TCCAAACTACGCGATTTTAA+TGG + chr8.2:27494110-27494129 MS.gene011944:CDS 35.0%
! TTTTGTCTTGAGTAATCCTC+CGG - chr8.2:27493023-27493042 None:intergenic 35.0%
!! AACTACGCGATTTTAATGGT+TGG + chr8.2:27494114-27494133 MS.gene011944:CDS 35.0%
!! TTAGATACTGGTGTTATGAG+TGG + chr8.2:27493895-27493914 MS.gene011944:intron 35.0%
!!! ACGTGAAACTTATTTTGGGA+AGG - chr8.2:27493593-27493612 None:intergenic 35.0%
!!! CATTTTTTCGAACATGCAAC+CGG + chr8.2:27494648-27494667 MS.gene011944:CDS 35.0%
!!! CTGGTATATCTGTTTTAGCT+TGG + chr8.2:27495150-27495169 MS.gene011944:CDS 35.0%
!!! GAAACTTATTTTGGGAAGGA+GGG - chr8.2:27493589-27493608 None:intergenic 35.0%
!!! GGAAGTTTTTTCATGTTTGC+TGG + chr8.2:27495131-27495150 MS.gene011944:CDS 35.0%
!!! TGAAACTTATTTTGGGAAGG+AGG - chr8.2:27493590-27493609 None:intergenic 35.0%
AAAAGTCTCACCAAGGTGAA+GGG + chr8.2:27494556-27494575 MS.gene011944:CDS 40.0%
AAGCCCAATAATCATTCCTC+CGG - chr8.2:27494847-27494866 None:intergenic 40.0%
AATCAGTGACACACAACAAG+AGG + chr8.2:27493948-27493967 MS.gene011944:CDS 40.0%
ACGTTGGATGTTAATTGCTG+CGG + chr8.2:27494617-27494636 MS.gene011944:CDS 40.0%
AGGATCCTACTAATGCACAT+AGG - chr8.2:27493993-27494012 None:intergenic 40.0%
ATGGTTGGAAGATGTGTTTG+TGG + chr8.2:27494129-27494148 MS.gene011944:CDS 40.0%
CAACAAGGGGATTAAGAAAC+CGG - chr8.2:27493386-27493405 None:intergenic 40.0%
CATGGAAACAACAGCATTCA+TGG - chr8.2:27495075-27495094 None:intergenic 40.0%
CGATGAGTAAGTAAGGTATG+GGG - chr8.2:27492966-27492985 None:intergenic 40.0%
CTTGGTTGGAGATTAATGCT+TGG + chr8.2:27494318-27494337 MS.gene011944:intron 40.0%
CTTTGCTCTTATGATAGCAC+CGG + chr8.2:27494164-27494183 MS.gene011944:CDS 40.0%
GATTATTGGGCTTACGCTAT+TGG + chr8.2:27494854-27494873 MS.gene011944:CDS 40.0%
GCCTCAATATTGTTCATCCT+TGG + chr8.2:27494066-27494085 MS.gene011944:CDS 40.0%
GGAAGAACCTCTGATTACAT+TGG + chr8.2:27494021-27494040 MS.gene011944:CDS 40.0%
GGCCCATAAAACATTTCCAT+TGG - chr8.2:27494907-27494926 None:intergenic 40.0%
TTACCTCAAAAGTCTCACCA+AGG + chr8.2:27494549-27494568 MS.gene011944:CDS 40.0%
TTAGTAGGATCCTTAACAGC+AGG + chr8.2:27494000-27494019 MS.gene011944:CDS 40.0%
TTGTGCCATAGTTGCTTCAA+TGG + chr8.2:27492714-27492733 MS.gene011944:CDS 40.0%
! ACGATGCTTATTTAAGACGG+GGG + chr8.2:27493801-27493820 MS.gene011944:intron 40.0%
! AGGGATTCAAGTTTAGTGAC+CGG + chr8.2:27493328-27493347 MS.gene011944:intron 40.0%
! ATATTGTTCATCCTTGGTGC+AGG + chr8.2:27494072-27494091 MS.gene011944:CDS 40.0%
! CTTTGCCTTTAGTTTCAGGA+AGG - chr8.2:27495193-27495212 None:intergenic 40.0%
! GTTTTCGGTTTTCCCTAAGT+GGG + chr8.2:27493548-27493567 MS.gene011944:intron 40.0%
! TGTTTTCGGTTTTCCCTAAG+TGG + chr8.2:27493547-27493566 MS.gene011944:intron 40.0%
!! AGCTTTAGAGGAAATGGAGA+TGG + chr8.2:27495211-27495230 MS.gene011944:CDS 40.0%
!! AGGCAAAGCTTTAGAGGAAA+TGG + chr8.2:27495205-27495224 MS.gene011944:CDS 40.0%
AAAGTCTCACCAAGGTGAAG+GGG + chr8.2:27494557-27494576 MS.gene011944:CDS 45.0%
AGAAGCAGAACTTCGTCTCA+AGG + chr8.2:27494473-27494492 MS.gene011944:CDS 45.0%
AGAGGTTCTTCCTGCTGTTA+AGG - chr8.2:27494013-27494032 None:intergenic 45.0%
AGCAACTATGGCACAAGCAA+AGG - chr8.2:27492710-27492729 None:intergenic 45.0%
CAAAAGTCTCACCAAGGTGA+AGG + chr8.2:27494555-27494574 MS.gene011944:CDS 45.0%
CGTACCATAACCAGAAACGA+TGG - chr8.2:27492743-27492762 None:intergenic 45.0%
GCACCGGAGGAATGATTATT+GGG + chr8.2:27494841-27494860 MS.gene011944:CDS 45.0%
GGAAGATGTGTTTGTGGTGT+AGG + chr8.2:27494135-27494154 MS.gene011944:CDS 45.0%
GGACACCATTGAAGCAACTA+TGG - chr8.2:27492722-27492741 None:intergenic 45.0%
TCAATGGTGTCCATCGTTTC+TGG + chr8.2:27492730-27492749 MS.gene011944:CDS 45.0%
TGGATGTTAATTGCTGCGGT+TGG + chr8.2:27494621-27494640 MS.gene011944:CDS 45.0%
TGTGTTTGTGGTGTAGGTGT+TGG + chr8.2:27494141-27494160 MS.gene011944:CDS 45.0%
! ACACAACAAGAGGTTCTAGC+AGG + chr8.2:27493958-27493977 MS.gene011944:CDS 45.0%
! AGCACCGGAGGAATGATTAT+TGG + chr8.2:27494840-27494859 MS.gene011944:CDS 45.0%
! ATCCTTGGTGCAGGTCTAAT+GGG + chr8.2:27494081-27494100 MS.gene011944:CDS 45.0%
! ATTGGGTCTTAGCTTGACTG+TGG + chr8.2:27494872-27494891 MS.gene011944:CDS 45.0%
! TCACCTTGGTGAGACTTTTG+AGG - chr8.2:27494555-27494574 None:intergenic 45.0%
!! CTTTTGCAAATTAGCACCGG+AGG + chr8.2:27494828-27494847 MS.gene011944:CDS 45.0%
!! GTGTCCATCGTTTCTGGTTA+TGG + chr8.2:27492736-27492755 MS.gene011944:CDS 45.0%
AGGGCACAAGGAGCAAGTAT+TGG + chr8.2:27495032-27495051 MS.gene011944:CDS 50.0%
CCTTGCATAACCAACCACCT+TGG - chr8.2:27494402-27494421 None:intergenic 50.0%
CCTTGTGCCCTCAACTTCAA+AGG - chr8.2:27495023-27495042 None:intergenic 50.0%
CGTATGTTGCGACGATGCTA+AGG - chr8.2:27494935-27494954 None:intergenic 50.0%
CTTTCCAAACCCCTTCACCT+TGG - chr8.2:27494569-27494588 None:intergenic 50.0%
TAACGATGCCTGAGTCACCA+AGG + chr8.2:27494382-27494401 MS.gene011944:CDS 50.0%
TGCGACGATGCTAAGGATCA+AGG - chr8.2:27494928-27494947 None:intergenic 50.0%
TGGGCTTGGGCCTATTACTT+GGG + chr8.2:27494977-27494996 MS.gene011944:CDS 50.0%
TTGGGCTTGGGCCTATTACT+TGG + chr8.2:27494976-27494995 MS.gene011944:CDS 50.0%
! ATCCAACGTACAGAAGGCGT+TGG - chr8.2:27494606-27494625 None:intergenic 50.0%
! CATCCTTGGTGCAGGTCTAA+TGG + chr8.2:27494080-27494099 MS.gene011944:CDS 50.0%
! CCAAGGTGGTTGGTTATGCA+AGG + chr8.2:27494399-27494418 MS.gene011944:CDS 50.0%
! TCCTTGGTGCAGGTCTAATG+GGG + chr8.2:27494082-27494101 MS.gene011944:CDS 50.0%
!! CCTTTGAAGTTGAGGGCACA+AGG + chr8.2:27495020-27495039 MS.gene011944:CDS 50.0%
ACCCCATTAGACCTGCACCA+AGG - chr8.2:27494086-27494105 None:intergenic 55.0%
CTCACCAAGGTGAAGGGGTT+TGG + chr8.2:27494562-27494581 MS.gene011944:CDS 55.0%
GACCAACGCCTTCTGTACGT+TGG + chr8.2:27494601-27494620 MS.gene011944:CDS 55.0%
GCGACGCCCAATGTAATCAG+AGG - chr8.2:27494031-27494050 None:intergenic 55.0%
GGTGCAGGTCTAATGGGGTA+TGG + chr8.2:27494087-27494106 MS.gene011944:CDS 55.0%
! ACCAACCACCTTGGTGACTC+AGG - chr8.2:27494393-27494412 None:intergenic 55.0%
CGATGCCTGAGTCACCAAGG+TGG + chr8.2:27494385-27494404 MS.gene011944:CDS 60.0%
GCCTGAGTCACCAAGGTGGT+TGG + chr8.2:27494389-27494408 MS.gene011944:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 27492652 27495298 27492652 ID=MS.gene011944
chr8.2 mRNA 27492652 27495298 27492652 ID=MS.gene011944.t1;Parent=MS.gene011944
chr8.2 exon 27492652 27492757 27492652 ID=MS.gene011944.t1.exon1;Parent=MS.gene011944.t1
chr8.2 CDS 27492652 27492757 27492652 ID=cds.MS.gene011944.t1;Parent=MS.gene011944.t1
chr8.2 exon 27493899 27494273 27493899 ID=MS.gene011944.t1.exon2;Parent=MS.gene011944.t1
chr8.2 CDS 27493899 27494273 27493899 ID=cds.MS.gene011944.t1;Parent=MS.gene011944.t1
chr8.2 exon 27494349 27495298 27494349 ID=MS.gene011944.t1.exon3;Parent=MS.gene011944.t1
chr8.2 CDS 27494349 27495298 27494349 ID=cds.MS.gene011944.t1;Parent=MS.gene011944.t1
Gene Sequence

>MS.gene011944

ATGATAACAAATCAAGGTGATAAAGAAGACCAAACGAACACGTTCAACAAATATGCCTTTGCTTGTGCCATAGTTGCTTCAATGGTGTCCATCGTTTCTGGTTATGGTACGTAATTATCGCATTCTCTAATCTCTTCCACTTTTAATTTTATTTACTTTCGCTATTGTGTCACTATTCATTGTTCCAATAATTTTTTTTTTCTTTTGTAGTTTTCACTAATTTGTTATACATGTCAAAATACATACTTCCTCCGATCACAATTATAAACGAAAAACTTTTAGGTTCATTTAACAATTAGTGTATGTGGTGACCCCATACCTTACTTACTCATCGAACCTAAAAAAAGTTTTTTTACTTATATTAATGACCGGAGGATTACTCAAGACAAAACCTTCAAGTAGCCACAAATATTTTTTTGACTCAAACCACACAAATCAGAAACAAAAACATGAATGTAACTAGGTATTGTTTTTACGTGGTTAATTGAACTTTATATGGTAAACTAAAATGAAAAAATTGAATAGAGGTTGTGTTTCATATCAAAACCTTTTCTTGAAGTTAATTTATTTTGAGGGATTCGATTTTTTTTTATTTACACAAACAAACTTATGATATTTCATTCATAATAAAAGAAGGAATGACACACTTGAAAGTTAATTTGAGTTTTTTATTTTGAGGGATTCAAGTTTAGTGACCGGTTCCTTCAAAAAAAAAAAAAAAAGTTTAGTGACCGGTTTCTTAATCCCCTTGTTGTTTAAGTGCATATTGAAAGAAATCTTTTATGCAACTAGTTTGCGTACTCATTGTACACCAATATATTTTGCTTACTCAAAAAAATAAAACTTTTTCTAGTTAACATCAATGTTTTTGTTGTTGTTGTAAGAACAAATTTTTTGTTTTCGGTTTTCCCTAAGTGGGATCAACTAACATACTCCCTCCTTCCCAAAATAAGTTTCACGTTTGAAAAAAAATAATTTGTTTCAAAAATAATTTTTCCATTTAATTTTCAATGCAATTTTAATTTTTTTTTAACTTACTCTCAAATTAATATTATGTATATTATTCTCAATAAGGATAATTTGGTAAAATTATTATTTTCACTCTTTCGTGTATCTTCTTTTCTTAATATATATGTGAAATAATCAAATACGATGCTTATTTAAGACGGGGGAGACTCTCACAAATAAAACACAGACATGGTAGACATATTTGACTCTAACTATTACACATACATGATTAATTTTAGATACTGGTGTTATGAGTGGAGCAATGTTGTTCATAAAGGAAGATTTGGGAATCAGTGACACACAACAAGAGGTTCTAGCAGGAATCTTAAACCTATGTGCATTAGTAGGATCCTTAACAGCAGGAAGAACCTCTGATTACATTGGGCGTCGCTACACAATCTTCTTAGCCTCAATATTGTTCATCCTTGGTGCAGGTCTAATGGGGTATGGTCCAAACTACGCGATTTTAATGGTTGGAAGATGTGTTTGTGGTGTAGGTGTTGGCTTTGCTCTTATGATAGCACCGGTTTATTCAGCTGAAATTTCTTCTGCTTCATCAAGAGGCTTCTTAACCTCTTTGCCTGAACTTTGTATTGGTATTGGAATCTTGTTAGGTTATATATCAAACTATTTTTTGGGAAAATATTTGAGTTTGAAACTTGGTTGGAGATTAATGCTTGGTATTGCAGCTTTGCCTTCATTTGTAGTAGCGTTTTGTATTTTAACGATGCCTGAGTCACCAAGGTGGTTGGTTATGCAAGGTCAATTAGGAAAAGCAAAAAAAGTTCTATTGCAAGTTTCAAACACAACGCAAGAAGCAGAACTTCGTCTCAAGGATATAAAAATCGCTGCTGGTTTAGACGAAAATTGTAACGATGAAATTGTGAAGTTACCTCAAAAGTCTCACCAAGGTGAAGGGGTTTGGAAAGAGTTGATTTTAAGACCAACGCCTTCTGTACGTTGGATGTTAATTGCTGCGGTTGGAATTCATTTTTTCGAACATGCAACCGGTATTGAAGCTGTTATGTTATATAGTCCAAGAATTTTCAAAAAAGCAGGTGTTACAAGTAAAGAAAAGCTTTTACTTGCAACTATTGGAGTAGGTTTAACAAAAATTGTTTTTCTTTTAATTGCTTTGTTTTTACTTGACAAACTTGGTAGAAGAAGACTTTTGCAAATTAGCACCGGAGGAATGATTATTGGGCTTACGCTATTGGGTCTTAGCTTGACTGTGGTAGATAAATCCAATGGAAATGTTTTATGGGCCTTGATCCTTAGCATCGTCGCAACATACGCTTATGTTGCTTTCTTTAATATTGGGCTTGGGCCTATTACTTGGGTTTATAGTTCAGAGATATTTCCTTTGAAGTTGAGGGCACAAGGAGCAAGTATTGGAGTTGCTGTGAATAGAACCATGAATGCTGTTGTTTCCATGACTTTTATTTCAATCTATAAAGCTATCACAATAGGTGGAAGTTTTTTCATGTTTGCTGGTATATCTGTTTTAGCTTGGTTGTTTTTCTACTTTTTCCTTCCTGAAACTAAAGGCAAAGCTTTAGAGGAAATGGAGATGGTTTTTACCAAAAAATCAAGTGGTAAAAATGTGGCAATAGAAATGGATCCAATACAGAAGGTCTAG

Protein sequence

>MS.gene011944.t1

MITNQGDKEDQTNTFNKYAFACAIVASMVSIVSGYDTGVMSGAMLFIKEDLGISDTQQEVLAGILNLCALVGSLTAGRTSDYIGRRYTIFLASILFILGAGLMGYGPNYAILMVGRCVCGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLALPSFVVAFCILTMPESPRWLVMQGQLGKAKKVLLQVSNTTQEAELRLKDIKIAAGLDENCNDEIVKLPQKSHQGEGVWKELILRPTPSVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKEKLLLATIGVGLTKIVFLLIALFLLDKLGRRRLLQISTGGMIIGLTLLGLSLTVVDKSNGNVLWALILSIVATYAYVAFFNIGLGPITWVYSSEIFPLKLRAQGASIGVAVNRTMNAVVSMTFISIYKAITIGGSFFMFAGISVLAWLFFYFFLPETKGKALEEMEMVFTKKSSGKNVAIEMDPIQKV