AlfalfaGEDB | MS.gene29636

M. sativa cultivar XinJiangDaYe / MS.gene29636

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29636.t1	XP_003616628.1	97.8	510	11	0	1	510	1	510	4.00E-283	983.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29636.t1	Q9LT15	70.0	506	150	2	2	506	4	508	5.3e-204	711.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29636.t1	G7KH04	97.8	510	11	0	1	510	1	510	2.9e-283	983.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene27308	MS.gene29636	PPI
MS.gene29636	MS.gene33740	PPI
MS.gene52737	MS.gene29636	PPI
MS.gene29636	MS.gene009409	PPI
MS.gene29636	MS.gene072437	PPI
MS.gene049813	MS.gene29636	PPI
MS.gene24951	MS.gene29636	PPI
MS.gene98665	MS.gene29636	PPI
MS.gene26272	MS.gene29636	PPI
MS.gene29636	MS.gene91108	PPI
MS.gene88587	MS.gene29636	PPI
MS.gene29636	MS.gene026188	PPI
MS.gene29636	MS.gene55171	PPI
MS.gene29636	MS.gene90685	PPI
MS.gene29636	MS.gene04694	PPI
MS.gene29636	MS.gene80690	PPI
MS.gene81380	MS.gene29636	PPI
MS.gene29636	MS.gene23356	PPI
MS.gene56212	MS.gene29636	PPI
MS.gene33406	MS.gene29636	PPI
MS.gene29636	MS.gene48055	PPI
MS.gene030874	MS.gene29636	PPI
MS.gene29636	MS.gene57358	PPI
MS.gene036638	MS.gene29636	PPI
MS.gene29636	MS.gene45698	PPI
MS.gene020721	MS.gene29636	PPI
MS.gene58760	MS.gene29636	PPI
MS.gene78327	MS.gene29636	PPI
MS.gene55173	MS.gene29636	PPI
MS.gene052538	MS.gene29636	PPI
MS.gene28665	MS.gene29636	PPI
MS.gene66840	MS.gene29636	PPI
MS.gene52719	MS.gene29636	PPI
MS.gene57711	MS.gene29636	PPI
MS.gene066532	MS.gene29636	PPI
MS.gene29636	MS.gene060358	PPI
MS.gene50065	MS.gene29636	PPI
MS.gene055946	MS.gene29636	PPI
MS.gene026190	MS.gene29636	PPI
MS.gene27999	MS.gene29636	PPI
MS.gene29636	MS.gene006546	PPI
MS.gene056687	MS.gene29636	PPI
MS.gene88585	MS.gene29636	PPI
MS.gene004491	MS.gene29636	PPI
MS.gene04674	MS.gene29636	PPI
MS.gene003775	MS.gene29636	PPI
MS.gene84416	MS.gene29636	PPI
MS.gene064881	MS.gene29636	PPI
MS.gene072436	MS.gene29636	PPI
MS.gene29636	MS.gene003641	PPI
MS.gene29636	MS.gene29239	PPI
MS.gene88586	MS.gene29636	PPI
MS.gene021157	MS.gene29636	PPI
MS.gene29636	MS.gene031757	PPI
MS.gene069970	MS.gene29636	PPI
MS.gene014297	MS.gene29636	PPI
MS.gene00961	MS.gene29636	PPI
MS.gene065799	MS.gene29636	PPI
MS.gene87411	MS.gene29636	PPI
MS.gene29636	MS.gene78328	PPI
MS.gene29636	MS.gene24272	PPI
MS.gene32215	MS.gene29636	PPI
MS.gene29636	MS.gene069970	PPI
MS.gene026189	MS.gene29636	PPI
MS.gene76380	MS.gene29636	PPI
MS.gene29303	MS.gene29636	PPI
MS.gene006546	MS.gene29636	PPI
MS.gene56211	MS.gene29636	PPI
MS.gene47969	MS.gene29636	PPI
MS.gene006547	MS.gene29636	PPI
MS.gene068492	MS.gene29636	PPI
MS.gene29636	MS.gene91107	PPI
MS.gene041419	MS.gene29636	PPI
MS.gene29636	MS.gene41130	PPI
MS.gene011944	MS.gene29636	PPI
MS.gene066531	MS.gene29636	PPI
MS.gene29636	MS.gene42511	PPI
MS.gene018043	MS.gene29636	PPI
MS.gene036548	MS.gene29636	PPI
MS.gene29636	MS.gene78842	PPI
MS.gene017222	MS.gene29636	PPI
MS.gene065882	MS.gene29636	PPI
MS.gene91109	MS.gene29636	PPI
MS.gene004000	MS.gene29636	PPI
MS.gene25807	MS.gene29636	PPI
MS.gene29636	MS.gene073258	PPI
MS.gene018060	MS.gene29636	PPI
MS.gene068273	MS.gene29636	PPI
MS.gene29636	MS.gene017905	PPI
MS.gene63888	MS.gene29636	PPI
MS.gene002806	MS.gene29636	PPI
MS.gene29636	MS.gene066530	PPI
MS.gene29636	MS.gene04695	PPI
MS.gene42509	MS.gene29636	PPI
MS.gene058372	MS.gene29636	PPI
MS.gene29304	MS.gene29636	PPI
MS.gene26968	MS.gene29636	PPI
MS.gene78329	MS.gene29636	PPI
MS.gene29240	MS.gene29636	PPI
MS.gene30558	MS.gene29636	PPI
MS.gene72918	MS.gene29636	PPI
MS.gene29636	MS.gene32188	PPI
MS.gene29636	MS.gene28482	PPI
MS.gene80819	MS.gene29636	PPI
MS.gene041500	MS.gene29636	PPI
MS.gene014127	MS.gene29636	PPI
MS.gene044198	MS.gene29636	PPI
MS.gene70727	MS.gene29636	PPI
MS.gene29241	MS.gene29636	PPI
MS.gene062929	MS.gene29636	PPI
MS.gene50704	MS.gene29636	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29636.t1	MTR_5g082540	97.843	510	11	0	1	510	1	510	0.0	1018
MS.gene29636.t1	MTR_1g038630	78.107	507	111	0	1	507	1	507	0.0	813
MS.gene29636.t1	MTR_1g038600	75.148	507	108	1	1	507	1	489	0.0	768
MS.gene29636.t1	MTR_4g091370	64.990	497	168	4	13	506	13	506	0.0	625
MS.gene29636.t1	MTR_5g041550	62.675	501	184	2	1	498	1	501	0.0	618
MS.gene29636.t1	MTR_3g008160	60.202	495	191	4	10	501	10	501	0.0	618
MS.gene29636.t1	MTR_3g093010	61.584	505	190	3	3	504	2	505	0.0	612
MS.gene29636.t1	MTR_5g006070	58.282	489	200	3	14	499	13	500	0.0	611
MS.gene29636.t1	MTR_0204s0020	56.504	492	209	3	7	497	5	492	0.0	593
MS.gene29636.t1	MTR_0009s0370	58.032	498	206	2	4	498	2	499	0.0	592
MS.gene29636.t1	MTR_4g090600	61.523	499	183	4	13	508	13	505	0.0	589
MS.gene29636.t1	MTR_0204s0020	56.098	492	208	4	7	497	5	489	0.0	583
MS.gene29636.t1	MTR_3g008170	56.725	513	215	5	1	509	1	510	0.0	580
MS.gene29636.t1	MTR_1g104750	55.000	500	220	4	1	497	1	498	0.0	577
MS.gene29636.t1	MTR_5g094760	55.010	489	215	3	7	494	11	495	0.0	567
MS.gene29636.t1	MTR_7g091690	55.578	493	214	3	6	497	10	498	0.0	564
MS.gene29636.t1	MTR_1g104780	55.888	501	216	4	8	504	7	506	0.0	564
MS.gene29636.t1	MTR_1g104770	53.800	500	227	3	1	497	1	499	0.0	560
MS.gene29636.t1	MTR_5g006070	58.278	453	185	3	50	499	1	452	0.0	559
MS.gene29636.t1	MTR_3g008160	59.780	455	177	4	50	501	1	452	0.0	559
MS.gene29636.t1	MTR_4g116790	53.200	500	227	4	2	499	6	500	0.0	559
MS.gene29636.t1	MTR_3g007910	55.599	509	191	5	3	508	2	478	0.0	553
MS.gene29636.t1	MTR_3g023480	56.442	489	210	2	14	499	12	500	0.0	552
MS.gene29636.t1	MTR_0204s0040	52.314	497	232	3	4	499	10	502	0.0	550
MS.gene29636.t1	MTR_4g116770	52.314	497	232	3	4	499	206	698	0.0	549
MS.gene29636.t1	MTR_6g087040	52.567	487	226	4	15	499	18	501	0.0	524
MS.gene29636.t1	MTR_6g088375	52.567	487	226	4	15	499	18	501	0.0	524
MS.gene29636.t1	MTR_3g093060	58.537	451	183	3	50	496	1	451	0.0	523
MS.gene29636.t1	MTR_8g102860	52.361	487	227	4	15	499	18	501	0.0	523
MS.gene29636.t1	MTR_3g074390	50.000	484	238	3	17	498	22	503	8.12e-178	509
MS.gene29636.t1	MTR_3g074410	49.287	491	245	3	18	506	20	508	3.49e-175	503
MS.gene29636.t1	MTR_8g102860	51.549	452	214	4	50	499	1	449	4.27e-166	478
MS.gene29636.t1	MTR_3g074270	45.800	500	246	4	1	498	1	477	5.04e-164	473
MS.gene29636.t1	MTR_4g116790	52.342	363	168	3	2	362	6	365	1.32e-138	405
MS.gene29636.t1	MTR_3g074380	51.003	349	167	3	17	363	20	366	4.56e-122	362
MS.gene29636.t1	MTR_3g074340	46.708	319	167	3	189	504	20	338	3.20e-106	321
MS.gene29636.t1	MTR_3g074320	46.395	319	168	3	189	504	20	338	9.66e-106	320
MS.gene29636.t1	MTR_3g074370	46.395	319	168	3	189	504	20	338	1.31e-105	319
MS.gene29636.t1	MTR_3g074400	36.203	453	229	10	50	478	1	417	1.29e-84	268
MS.gene29636.t1	MTR_1g038620	66.456	158	36	1	203	360	50	190	5.13e-66	212
MS.gene29636.t1	MTR_4g069500	29.038	520	316	12	14	508	21	512	3.75e-56	196
MS.gene29636.t1	MTR_5g096000	54.645	183	63	2	3	185	2	164	8.11e-56	189
MS.gene29636.t1	MTR_5g096000	58.451	142	58	1	368	508	168	309	1.74e-39	145
MS.gene29636.t1	MTR_3g084110	27.071	495	330	8	20	507	25	495	3.87e-53	187
MS.gene29636.t1	MTR_4g069500	30.769	442	274	9	92	508	28	462	3.50e-52	184
MS.gene29636.t1	MTR_4g072030	29.666	509	302	15	12	495	16	493	5.77e-52	184
MS.gene29636.t1	MTR_3g116240	28.543	494	304	12	14	483	19	487	1.36e-50	181
MS.gene29636.t1	MTR_7g005910	26.869	495	332	8	20	508	30	500	2.08e-50	180
MS.gene29636.t1	MTR_6g088450	28.998	469	293	12	22	476	57	499	6.15e-50	179
MS.gene29636.t1	MTR_1g116650	26.908	498	316	8	20	508	75	533	8.44e-50	179
MS.gene29636.t1	MTR_1g116660	27.292	480	314	9	20	490	32	485	4.66e-49	176
MS.gene29636.t1	MTR_1g114280	57.595	158	48	3	346	503	21	159	2.33e-48	164
MS.gene29636.t1	MTR_2g048720	33.828	337	197	6	21	351	24	340	4.50e-46	169
MS.gene29636.t1	MTR_6g018790	28.395	486	299	13	14	490	100	545	2.02e-45	167
MS.gene29636.t1	MTR_8g103500	26.000	500	317	13	10	487	3	471	3.99e-45	166
MS.gene29636.t1	MTR_8g077890	27.163	497	299	13	22	487	18	482	4.16e-45	166
MS.gene29636.t1	MTR_2g013310	27.607	489	311	13	13	489	45	502	1.53e-44	164
MS.gene29636.t1	MTR_2g013310	29.612	412	270	9	90	489	26	429	9.55e-43	158
MS.gene29636.t1	MTR_7g446340	25.203	492	326	12	13	490	42	505	1.03e-42	159
MS.gene29636.t1	MTR_6g007340	25.203	492	326	12	13	490	42	505	1.03e-42	159
MS.gene29636.t1	MTR_5g075300	26.721	494	313	10	18	487	14	482	2.50e-42	158
MS.gene29636.t1	MTR_4g077740	26.971	482	306	10	19	484	46	497	4.50e-42	157
MS.gene29636.t1	MTR_7g082270	25.311	482	326	8	5	485	52	500	7.25e-42	157
MS.gene29636.t1	MTR_2g049020	29.204	339	215	5	20	351	23	343	2.12e-41	157
MS.gene29636.t1	MTR_0064s0040	49.673	153	63	3	13	165	14	152	6.59e-41	144
MS.gene29636.t1	MTR_7g113970	26.639	488	311	9	9	483	38	491	6.54e-40	151
MS.gene29636.t1	MTR_8g077310	26.782	463	309	6	23	483	47	481	2.11e-39	149
MS.gene29636.t1	MTR_3g074330	49.315	146	65	2	15	153	15	158	1.06e-38	139
MS.gene29636.t1	MTR_3g074360	49.315	146	65	2	15	153	15	158	1.06e-38	139
MS.gene29636.t1	MTR_3g074310	48.630	146	66	2	15	153	15	158	4.94e-38	137
MS.gene29636.t1	MTR_8g077310	28.647	377	260	4	109	483	15	384	6.02e-38	143
MS.gene29636.t1	MTR_1g022315	26.652	469	313	8	23	488	49	489	1.38e-37	144
MS.gene29636.t1	MTR_7g082270	27.954	347	224	5	5	351	52	372	2.37e-37	143
MS.gene29636.t1	MTR_2g026160	28.986	345	211	5	20	351	24	347	9.05e-37	143
MS.gene29636.t1	MTR_1g022315	28.198	383	265	5	109	488	15	390	1.82e-36	139
MS.gene29636.t1	MTR_5g020270	27.143	490	307	10	5	483	34	484	9.83e-36	139
MS.gene29636.t1	MTR_5g077580	28.191	376	198	7	21	351	24	372	2.51e-35	139
MS.gene29636.t1	MTR_8g077300	26.767	467	307	9	22	483	37	473	1.02e-34	136
MS.gene29636.t1	MTR_7g113960	26.667	405	275	7	84	483	67	454	1.58e-33	133
MS.gene29636.t1	MTR_5g020270	29.016	386	247	7	109	483	15	384	1.82e-33	131
MS.gene29636.t1	MTR_7g094450	27.002	437	272	10	66	485	65	471	4.06e-33	132
MS.gene29636.t1	MTR_2g020710	26.173	405	278	6	85	483	1	390	4.89e-32	127
MS.gene29636.t1	MTR_5g019870	26.739	460	291	13	77	505	48	492	5.72e-32	129
MS.gene29636.t1	MTR_2g020710	26.108	406	279	6	84	483	89	479	7.65e-32	128
MS.gene29636.t1	MTR_7g094110	27.137	468	298	11	23	484	42	472	8.37e-32	128
MS.gene29636.t1	MTR_3g080240	23.256	473	323	10	24	489	94	533	4.44e-31	126
MS.gene29636.t1	MTR_8g077310	29.305	331	204	6	23	351	47	349	5.35e-31	124
MS.gene29636.t1	MTR_4g069500	28.659	328	204	8	204	508	3	323	1.96e-30	121
MS.gene29636.t1	MTR_4g118610	26.521	411	283	6	84	489	92	488	4.27e-30	123
MS.gene29636.t1	MTR_4g064820	26.989	352	221	6	19	353	97	429	2.20e-29	121
MS.gene29636.t1	MTR_7g113970	27.042	355	218	7	9	351	38	363	7.32e-28	115
MS.gene29636.t1	MTR_5g020270	25.306	490	295	10	5	483	34	463	7.79e-28	116
MS.gene29636.t1	MTR_7g094110	26.496	468	281	11	23	484	42	452	9.49e-27	113
MS.gene29636.t1	MTR_2g026140	26.761	355	202	7	29	364	30	345	1.62e-26	113
MS.gene29636.t1	MTR_4g013205	24.773	440	315	8	47	483	42	468	2.36e-26	112
MS.gene29636.t1	MTR_7g113960	28.938	273	178	5	84	351	67	328	2.96e-25	107
MS.gene29636.t1	MTR_2g020710	25.740	338	230	6	84	415	89	411	2.81e-24	105
MS.gene29636.t1	MTR_6g087910	24.353	464	309	10	28	484	55	483	5.79e-24	105
MS.gene29636.t1	MTR_2g020710	25.595	336	229	6	84	413	89	409	7.67e-23	101
MS.gene29636.t1	MTR_4g118610	26.706	337	228	6	84	415	92	414	4.06e-22	99.4
MS.gene29636.t1	MTR_2g020710	27.206	272	181	5	84	349	89	349	2.39e-21	96.3
MS.gene29636.t1	MTR_5g024740	25.957	235	151	5	23	254	4	218	7.10e-18	87.4
MS.gene29636.t1	MTR_3g116060	30.890	191	126	3	75	259	31	221	2.70e-17	85.5
MS.gene29636.t1	MTR_5g044910	26.163	172	125	2	85	254	47	218	2.80e-16	82.4
MS.gene29636.t1	MTR_8g073100	26.016	246	156	6	30	269	11	236	4.50e-16	81.6
MS.gene29636.t1	MTR_3g118530	28.235	170	120	2	92	259	54	223	2.60e-12	69.7
MS.gene29636.t1	MTR_6g006260	33.884	121	73	3	238	351	32	152	4.90e-12	66.2
MS.gene29636.t1	MTR_3g118530	28.070	171	121	2	92	260	54	224	5.09e-12	68.9
MS.gene29636.t1	MTR_6g006260	33.884	121	73	3	238	351	33	153	9.49e-12	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29636.t1	AT3G19940	70.612	490	142	2	19	507	21	509	0.0	729
MS.gene29636.t1	AT1G50310	70.393	483	140	3	19	499	21	502	0.0	712
MS.gene29636.t1	AT5G23270	67.600	500	160	1	2	499	3	502	0.0	698
MS.gene29636.t1	AT3G19930	66.008	506	167	3	3	505	2	505	0.0	681
MS.gene29636.t1	AT3G19930	66.008	506	167	3	3	505	2	505	0.0	681
MS.gene29636.t1	AT1G11260	62.351	502	185	3	1	499	1	501	0.0	640
MS.gene29636.t1	AT4G21480	66.189	488	161	3	13	498	13	498	0.0	633
MS.gene29636.t1	AT5G26340	57.594	507	210	4	1	504	1	505	0.0	617
MS.gene29636.t1	AT4G02050	55.668	494	214	3	7	499	11	500	0.0	582
MS.gene29636.t1	AT4G02050	55.668	494	214	3	7	499	11	500	0.0	582
MS.gene29636.t1	AT1G77210	52.459	488	227	4	15	500	18	502	0.0	533
MS.gene29636.t1	AT1G77210	52.459	488	227	4	15	500	18	502	0.0	533
MS.gene29636.t1	AT5G26250	51.509	497	235	4	3	497	2	494	0.0	530
MS.gene29636.t1	AT1G34580	50.000	506	246	3	2	502	3	506	0.0	529
MS.gene29636.t1	AT1G50310	70.201	349	102	2	153	499	11	359	0.0	527
MS.gene29636.t1	AT3G05960	50.298	503	244	4	4	504	2	500	0.0	523
MS.gene29636.t1	AT1G07340	52.789	502	230	5	1	499	1	498	5.48e-177	507
MS.gene29636.t1	AT5G61520	50.615	488	234	3	17	499	18	503	3.78e-176	506
MS.gene29636.t1	AT1G34580	50.655	458	219	3	50	502	1	456	2.98e-169	486
MS.gene29636.t1	AT5G61520	50.000	456	221	3	49	499	2	455	7.41e-160	462
MS.gene29636.t1	AT1G77210	52.857	350	161	3	153	500	6	353	9.67e-131	384
MS.gene29636.t1	AT2G16130	29.767	514	314	9	4	495	9	497	1.89e-57	199
MS.gene29636.t1	AT2G16120	30.080	502	306	10	16	495	19	497	2.47e-57	199
MS.gene29636.t1	AT3G18830	28.486	502	298	13	22	494	35	504	5.45e-54	191
MS.gene29636.t1	AT2G18480	28.870	478	283	14	37	487	36	483	7.18e-49	176
MS.gene29636.t1	AT5G16150	27.848	474	303	9	14	483	100	538	3.47e-46	169
MS.gene29636.t1	AT5G16150	27.848	474	303	9	14	483	100	538	3.47e-46	169
MS.gene29636.t1	AT5G16150	27.848	474	303	9	14	483	100	538	3.47e-46	169
MS.gene29636.t1	AT2G43330	28.211	475	313	8	22	490	30	482	5.24e-45	166
MS.gene29636.t1	AT4G36670	27.875	513	307	15	6	488	1	480	4.16e-44	162
MS.gene29636.t1	AT5G59250	28.398	493	297	14	19	488	99	558	1.83e-43	162
MS.gene29636.t1	AT2G20780	27.181	493	319	11	8	488	37	501	2.06e-43	161
MS.gene29636.t1	AT5G17010	27.178	482	305	9	19	484	48	499	7.93e-42	156
MS.gene29636.t1	AT5G17010	27.178	482	305	9	19	484	48	499	7.93e-42	156
MS.gene29636.t1	AT5G17010	27.178	482	305	9	19	484	48	499	7.93e-42	156
MS.gene29636.t1	AT1G30220	29.204	339	215	4	20	351	25	345	3.22e-41	156
MS.gene29636.t1	AT2G20780	28.037	428	289	8	70	488	26	443	4.21e-41	154
MS.gene29636.t1	AT1G75220	27.564	468	309	6	23	488	48	487	3.67e-40	152
MS.gene29636.t1	AT1G08930	27.917	480	291	12	16	483	51	487	1.93e-39	150
MS.gene29636.t1	AT1G08930	27.917	480	291	12	16	483	51	487	1.93e-39	150
MS.gene29636.t1	AT1G19450	27.505	469	308	8	23	488	49	488	7.05e-38	145
MS.gene29636.t1	AT1G08890	26.852	432	288	10	59	485	50	458	1.23e-37	144
MS.gene29636.t1	AT1G08900	26.744	430	287	8	59	483	6	412	2.14e-37	142
MS.gene29636.t1	AT2G35740	28.409	352	213	7	21	358	24	350	3.12e-37	145
MS.gene29636.t1	AT1G08900	26.744	430	287	8	59	483	48	454	6.28e-37	142
MS.gene29636.t1	AT1G08900	26.744	430	287	8	59	483	48	454	6.28e-37	142
MS.gene29636.t1	AT1G08900	27.407	405	274	7	84	483	57	446	7.25e-37	142
MS.gene29636.t1	AT4G16480	28.895	353	212	7	20	358	24	351	1.86e-36	142
MS.gene29636.t1	AT4G16480	28.895	353	212	7	20	358	24	351	1.86e-36	142
MS.gene29636.t1	AT4G16480	28.895	353	212	7	20	358	24	351	1.86e-36	142
MS.gene29636.t1	AT3G05155	25.420	476	316	11	13	485	17	456	3.04e-36	140
MS.gene29636.t1	AT3G03090	26.186	485	304	12	19	483	48	498	1.51e-35	139
MS.gene29636.t1	AT3G05400	27.047	403	280	5	84	484	66	456	2.46e-35	137
MS.gene29636.t1	AT3G05165	25.102	490	311	13	6	483	14	459	2.08e-34	135
MS.gene29636.t1	AT3G05165	25.102	490	311	13	6	483	14	459	2.08e-34	135
MS.gene29636.t1	AT3G05165	25.102	490	311	13	6	483	14	459	2.08e-34	135
MS.gene29636.t1	AT2G48020	26.961	408	278	6	84	486	68	460	1.01e-33	133
MS.gene29636.t1	AT2G48020	26.961	408	278	6	84	486	68	460	1.01e-33	133
MS.gene29636.t1	AT5G18840	27.033	418	285	6	70	483	73	474	1.09e-33	133
MS.gene29636.t1	AT1G54730	26.733	404	278	6	84	483	72	461	1.09e-33	133
MS.gene29636.t1	AT3G05160	27.494	411	264	10	86	484	14	402	1.04e-32	129
MS.gene29636.t1	AT3G05160	27.494	411	264	10	86	484	14	402	1.04e-32	129
MS.gene29636.t1	AT3G05160	25.918	490	307	14	6	483	5	450	1.63e-32	129
MS.gene29636.t1	AT3G05150	24.405	504	330	12	6	497	18	482	5.22e-32	129
MS.gene29636.t1	AT5G27360	25.833	480	301	12	16	483	28	464	1.51e-31	127
MS.gene29636.t1	AT3G05150	24.385	488	321	11	6	484	18	466	1.54e-31	127
MS.gene29636.t1	AT3G05150	24.385	488	321	11	6	484	18	466	1.54e-31	127
MS.gene29636.t1	AT5G27350	26.220	492	308	12	4	483	12	460	2.18e-31	127
MS.gene29636.t1	AT5G27360	25.833	480	301	12	16	483	76	512	4.87e-31	126
MS.gene29636.t1	AT1G05030	25.322	466	300	11	29	483	85	513	6.74e-31	126
MS.gene29636.t1	AT3G05165	25.995	427	267	13	6	423	14	400	1.23e-30	125
MS.gene29636.t1	AT3G05165	25.995	427	267	13	6	423	14	400	1.43e-30	124
MS.gene29636.t1	AT3G05165	25.995	427	267	13	6	423	14	400	1.43e-30	124
MS.gene29636.t1	AT1G08900	27.174	368	248	7	84	446	65	417	2.04e-30	123
MS.gene29636.t1	AT4G04760	24.661	442	290	8	59	486	54	466	9.33e-30	122
MS.gene29636.t1	AT4G04760	24.771	436	285	8	65	486	1	407	1.31e-29	120
MS.gene29636.t1	AT3G05400	27.249	389	263	7	98	484	66	436	4.09e-29	120
MS.gene29636.t1	AT1G05030	25.481	416	282	8	80	484	64	462	7.48e-29	119
MS.gene29636.t1	AT1G08920	25.099	506	307	14	3	484	12	469	1.06e-28	119
MS.gene29636.t1	AT1G54730	26.171	363	250	6	84	442	72	420	2.02e-28	117
MS.gene29636.t1	AT1G67300	24.622	463	310	9	28	483	56	486	3.14e-28	118
MS.gene29636.t1	AT1G08920	24.405	504	306	14	3	484	12	462	4.63e-28	117
MS.gene29636.t1	AT4G04750	24.197	467	316	10	21	483	35	467	6.97e-28	117
MS.gene29636.t1	AT4G04750	24.197	467	316	10	21	483	35	467	6.97e-28	117
MS.gene29636.t1	AT4G04750	24.197	467	316	10	21	483	79	511	8.14e-28	117
MS.gene29636.t1	AT1G54730	25.622	402	264	8	84	483	72	440	1.21e-27	115
MS.gene29636.t1	AT1G67300	24.406	463	310	8	28	483	56	485	2.11e-27	115
MS.gene29636.t1	AT1G67300	24.406	463	310	8	28	483	56	485	2.11e-27	115
MS.gene29636.t1	AT3G05155	26.393	341	217	9	13	351	17	325	3.05e-27	112
MS.gene29636.t1	AT1G54730	26.462	359	240	7	84	438	72	410	5.44e-27	113
MS.gene29636.t1	AT1G54730	26.462	359	240	7	84	438	72	410	5.44e-27	113
MS.gene29636.t1	AT5G27360	26.440	382	247	9	114	483	1	360	3.45e-26	110
MS.gene29636.t1	AT5G27360	26.440	382	247	9	114	483	1	360	3.45e-26	110
MS.gene29636.t1	AT1G67300	24.146	410	272	7	28	431	56	432	8.90e-26	110
MS.gene29636.t1	AT1G67300	24.146	410	272	7	28	431	56	432	8.90e-26	110
MS.gene29636.t1	AT1G08920	24.678	466	276	14	3	446	12	424	1.15e-25	110
MS.gene29636.t1	AT1G67300	24.695	328	219	5	28	351	56	359	1.15e-25	109
MS.gene29636.t1	AT1G67300	24.695	328	219	5	28	351	56	359	1.15e-25	109
MS.gene29636.t1	AT4G04760	23.810	441	292	8	59	486	54	463	1.35e-25	110
MS.gene29636.t1	AT5G27360	26.420	405	243	12	16	408	28	389	8.43e-25	107
MS.gene29636.t1	AT1G79820	23.820	466	307	9	28	483	59	486	1.21e-24	107
MS.gene29636.t1	AT1G79820	23.820	466	307	9	28	483	59	486	1.21e-24	107
MS.gene29636.t1	AT2G48020	29.861	288	187	5	84	366	68	345	2.05e-24	105
MS.gene29636.t1	AT2G48020	30.147	272	176	4	84	351	68	329	2.84e-24	104
MS.gene29636.t1	AT1G54730	28.148	270	184	4	84	351	72	333	3.68e-24	103
MS.gene29636.t1	AT3G20460	25.553	407	279	9	84	483	93	482	1.60e-23	103
MS.gene29636.t1	AT1G54730	24.931	361	236	8	84	442	72	399	1.98e-22	100
MS.gene29636.t1	AT5G17010	26.261	476	257	13	19	484	45	436	1.54e-21	97.4
MS.gene29636.t1	AT1G54730	25.210	357	226	9	84	438	72	389	4.10e-21	95.9
MS.gene29636.t1	AT1G54730	27.459	244	170	3	84	325	72	310	8.28e-21	94.0
MS.gene29636.t1	AT1G54730	27.459	244	170	3	84	325	72	310	8.28e-21	94.0
MS.gene29636.t1	AT1G79820	23.245	413	270	8	28	431	59	433	3.88e-20	93.6
MS.gene29636.t1	AT3G51490	29.167	240	147	8	23	259	4	223	1.49e-19	92.8
MS.gene29636.t1	AT3G51490	29.167	240	147	8	23	259	4	223	1.70e-19	92.4
MS.gene29636.t1	AT3G51490	32.759	174	112	5	89	259	2	173	1.58e-18	89.4
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.89e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.92e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.92e-14	76.6
MS.gene29636.t1	AT4G35300	33.548	155	101	2	108	260	70	224	1.92e-14	76.6
MS.gene29636.t1	AT1G20840	28.824	170	119	2	92	259	52	221	4.43e-14	75.5
MS.gene29636.t1	AT1G20840	28.824	170	119	2	92	259	52	221	4.43e-14	75.5
MS.gene29636.t1	AT1G79820	23.011	465	264	13	28	483	59	438	4.11e-12	68.6
MS.gene29636.t1	AT1G79360	24.910	277	182	8	88	348	118	384	1.33e-11	67.4

Find 107 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTGGAAGTCTCATTGGTTT+TGG	0.266797	5.1:-64643117	MS.gene29636:CDS
GGTTATGATCTTGGTATTAC+AGG	0.272215	5.1:-64644663	MS.gene29636:CDS
GAATGGATGGAGAATTTCTT+TGG	0.279935	5.1:-64644082	MS.gene29636:CDS
TGGAGAATTTCTTTGGGTCT+TGG	0.307717	5.1:-64644075	MS.gene29636:CDS
CACTTTACTCATTTCTTCAA+TGG	0.315479	5.1:+64643138	None:intergenic
ATGCTTTGTCACTTGAAGTT+TGG	0.318241	5.1:-64643241	MS.gene29636:CDS
ATCTATACCGTGGACAAGTT+TGG	0.319104	5.1:-64643661	MS.gene29636:CDS
TCTCCATCCATTCTCAAGAT+TGG	0.346844	5.1:+64644092	None:intergenic
TTGCCTTAGCTCCTTCTGTT+TGG	0.366514	5.1:+64643977	None:intergenic
CCTCTTTCGATCAAAGAGTT+TGG	0.371965	5.1:+64644000	None:intergenic
CGAAGAACTTTGTTCCTTGA+AGG	0.374695	5.1:-64643637	MS.gene29636:CDS
TCACCTGGCAAATAAACATT+TGG	0.380799	5.1:+64643608	None:intergenic
AAAATCAAGCAATAGCCTTA+TGG	0.381211	5.1:+64643059	None:intergenic
TCCAGTGTATTTGTCTGAAA+TGG	0.383135	5.1:-64644208	MS.gene29636:CDS
GGTCGCCTATTGCTTGGTTT+TGG	0.391594	5.1:-64644357	MS.gene29636:CDS
TGCTAGCGAGGAAGCCAAAA+AGG	0.394934	5.1:-64643896	MS.gene29636:CDS
TCCACTACTACAAGAGTGTT+TGG	0.397352	5.1:-64644471	MS.gene29636:CDS
CTTGTTGGTGCGTTGCTGAA+TGG	0.400451	5.1:-64644411	MS.gene29636:CDS
TATCCAAATGTTTATTTGCC+AGG	0.408587	5.1:-64643611	MS.gene29636:intron
TGGTGTAGGATATTGTAATC+AGG	0.408783	5.1:-64644337	MS.gene29636:intron
CGTTGATTCCGGTGAGTTGT+TGG	0.409649	5.1:+64643797	None:intergenic
ACTTTACTCATTTCTTCAAT+GGG	0.414809	5.1:+64643139	None:intergenic
ATCGTTGGTCGCCTATTGCT+TGG	0.415781	5.1:-64644363	MS.gene29636:CDS
AGAAAATGAAAGATGAATCT+AGG	0.417134	5.1:-64644587	MS.gene29636:CDS
CACATGTTTGGTCGCAGCCA+TGG	0.419087	5.1:-64644700	MS.gene29636:CDS
AAACATGATAACGTTGATTC+CGG	0.420198	5.1:+64643786	None:intergenic
AGCGCACCTCTCATCTTTGT+CGG	0.427027	5.1:+64644183	None:intergenic
TTCTCAATGATGTGTACAAT+TGG	0.428227	5.1:-64644150	MS.gene29636:CDS
CGCAAGATCTCAATGTTTGC+AGG	0.428791	5.1:-64644447	MS.gene29636:CDS
AATGGATGGAGAATTTCTTT+GGG	0.434880	5.1:-64644081	MS.gene29636:CDS
ATGGGAACGTTGTTTGTCTC+AGG	0.438025	5.1:+64643157	None:intergenic
AACAAATGGAAGGCAATATG+AGG	0.438666	5.1:-64644748	MS.gene29636:CDS
CAACATGTTCACTGCAACAT+TGG	0.439371	5.1:+64643297	None:intergenic
ATTTGTGTTTGTCACATGTT+TGG	0.443105	5.1:-64644712	MS.gene29636:CDS
CCGGTGAGTTGTTGGAAGAA+TGG	0.448545	5.1:+64643805	None:intergenic
CTACACCAAAACCAAGCAAT+AGG	0.455266	5.1:+64644352	None:intergenic
AGTTAATAAGATTTGCAACT+AGG	0.461079	5.1:+64644124	None:intergenic
GTATTAGTTTCTTCAACAAA+TGG	0.467925	5.1:-64644762	MS.gene29636:CDS
GTAAAGTGTGGAAGTCTCAT+TGG	0.469685	5.1:-64643123	MS.gene29636:CDS
TGCGGCATTTGCATGGTCGT+GGG	0.472926	5.1:-64643386	MS.gene29636:CDS
CACATCTTCCTTGTATATTG+CGG	0.476436	5.1:-64644517	MS.gene29636:CDS
GCATGGTCGTGGGGTGCGTT+AGG	0.477521	5.1:-64643376	MS.gene29636:CDS
AGGAAGATGTGAACAAAGTA+AGG	0.477699	5.1:+64644529	None:intergenic
TTTGGGTCTTGGAGCCGTCC+CGG	0.478984	5.1:-64644064	MS.gene29636:CDS
TCCGATGTTGTCACTGATCA+TGG	0.479679	5.1:-64643082	MS.gene29636:CDS
TTGCGGCATTTGCATGGTCG+TGG	0.481429	5.1:-64643387	MS.gene29636:CDS
TCTCTTGAAGTCCGATCTGC+AGG	0.488617	5.1:-64643328	MS.gene29636:CDS
GGTCGTGGGGTGCGTTAGGA+TGG	0.490632	5.1:-64643372	MS.gene29636:CDS
TGGTGCGTTGCTGAATGGTT+TGG	0.491142	5.1:-64644406	MS.gene29636:CDS
GACTAAGAGAAGATCCGCTT+CGG	0.491577	5.1:+64643426	None:intergenic
TTGCAAATCTTATTAACTAC+GGG	0.494530	5.1:-64644119	MS.gene29636:CDS
GTTGCAAATCTTATTAACTA+CGG	0.495997	5.1:-64644120	MS.gene29636:CDS
AGCATGATTGCTATCAAACT+TGG	0.497068	5.1:-64643478	MS.gene29636:CDS
CTTCCAATCTTGAGAATGGA+TGG	0.501684	5.1:-64644095	MS.gene29636:CDS
ACATTTGGATACCACCTTCA+AGG	0.502930	5.1:+64643623	None:intergenic
ATGAGAGGTGCGCTTAACAT+TGG	0.504447	5.1:-64644174	MS.gene29636:CDS
AAACATGTGACAAACACAAA+TGG	0.506888	5.1:+64644714	None:intergenic
CCAAACTCTTTGATCGAAAG+AGG	0.507554	5.1:-64644000	MS.gene29636:CDS
CATTGATTGTAGGTTGCCGT+TGG	0.511808	5.1:-64643502	MS.gene29636:intron
ACATGTTTGGTCGCAGCCAT+GGG	0.512718	5.1:-64644699	MS.gene29636:CDS
TGTCACTGATCATGGCCATA+AGG	0.514634	5.1:-64643074	MS.gene29636:CDS
TATTAACGCCGCAATATACA+AGG	0.523987	5.1:+64644509	None:intergenic
AGGCCAAACAGAAGGAGCTA+AGG	0.529680	5.1:-64643980	MS.gene29636:CDS
GGGACTTCCAATCTTGAGAA+TGG	0.530758	5.1:-64644099	MS.gene29636:CDS
AATGGTTTGGCTGTCAATGT+TGG	0.530802	5.1:-64644393	MS.gene29636:CDS
GCTATCAAACTTGGAGTTAG+CGG	0.531411	5.1:-64643469	MS.gene29636:CDS
CCTATGCATAACATGACTGC+CGG	0.532846	5.1:+64644045	None:intergenic
ATATTATACAAACAAGATAC+AGG	0.533042	5.1:-64643855	MS.gene29636:CDS
CTCATGTCTGCAGTAATTAG+CGG	0.537068	5.1:-64643715	MS.gene29636:CDS
AAACTTGGAGTTAGCGGTGA+AGG	0.539110	5.1:-64643463	MS.gene29636:CDS
CATATTTGAGAGATGGGTGC+AGG	0.547882	5.1:-64644786	None:intergenic
CTTTATATGTCTATATGTTG+CGG	0.549446	5.1:-64643404	MS.gene29636:CDS
TATATGTTGCGGCATTTGCA+TGG	0.566536	5.1:-64643393	MS.gene29636:CDS
TAGTTTCTTCAACAAATGGA+AGG	0.567741	5.1:-64644758	MS.gene29636:CDS
CCATTCTTCCAACAACTCAC+CGG	0.569051	5.1:-64643805	MS.gene29636:CDS
TCCAAACACTCTTGTAGTAG+TGG	0.572182	5.1:+64644470	None:intergenic
ATCGAAAGAGGCCAAACAGA+AGG	0.575347	5.1:-64643988	MS.gene29636:CDS
TTTAATTTCAATCTATACCG+TGG	0.575724	5.1:-64643671	MS.gene29636:CDS
ATGTGAACAAAGTAAGGAGT+TGG	0.577468	5.1:+64644535	None:intergenic
AGAACTTTGTTCCTTGAAGG+TGG	0.579046	5.1:-64643634	MS.gene29636:CDS
GCATAACATGACTGCCGGGA+CGG	0.579131	5.1:+64644050	None:intergenic
TGTTTGGTCGCAGCCATGGG+AGG	0.582749	5.1:-64644696	MS.gene29636:CDS
CTATGCATAACATGACTGCC+GGG	0.587014	5.1:+64644046	None:intergenic
GCAATGTTGCAAAAGATTCG+CGG	0.587849	5.1:-64643958	MS.gene29636:CDS
AAACTTCAAGTGACAAAGCA+TGG	0.588507	5.1:+64643243	None:intergenic
TCAAGAGAGCATATTTCACT+AGG	0.589607	5.1:+64643343	None:intergenic
CGGCATTGATAATGTTGATG+AGG	0.594919	5.1:-64643938	MS.gene29636:CDS
ACAAATGGAAGGCAATATGA+GGG	0.595636	5.1:-64644747	MS.gene29636:CDS
CCGGCAGTCATGTTATGCAT+AGG	0.596186	5.1:-64644045	MS.gene29636:CDS
GCCATTTCAGACAAATACAC+TGG	0.603630	5.1:+64644207	None:intergenic
TATGATCTTGGTATTACAGG+AGG	0.608993	5.1:-64644660	MS.gene29636:CDS
AATGTTGGAATGCTTATCGT+TGG	0.609195	5.1:-64644378	MS.gene29636:CDS
TTGAAGAAATGAGTAAAGTG+TGG	0.609477	5.1:-64643135	MS.gene29636:CDS
TGGAAGGCAATATGAGGGGA+AGG	0.610680	5.1:-64644742	MS.gene29636:CDS
GATAGCAATCATGCTTCCAA+CGG	0.611317	5.1:+64643486	None:intergenic
TACAGGAGGAGTGACTTCCA+TGG	0.616751	5.1:-64644646	MS.gene29636:CDS
GCGGCATTTGCATGGTCGTG+GGG	0.617064	5.1:-64643385	MS.gene29636:CDS
GTTTGTCTCAGGAAGAAACA+AGG	0.619422	5.1:+64643168	None:intergenic
TGGTAGCTTGACCTGCAGAT+CGG	0.622392	5.1:+64643317	None:intergenic
AAGATCTCAATGTTTGCAGG+TGG	0.629332	5.1:-64644444	MS.gene29636:CDS
TCTTCGTCCAAACTTGTCCA+CGG	0.636095	5.1:+64643654	None:intergenic
AGATCTAATTGATGCTAGCG+AGG	0.637738	5.1:-64643908	MS.gene29636:CDS
CATTCAGCAACGCACCAACA+AGG	0.638055	5.1:+64644412	None:intergenic
ATGTCTGCAGTAATTAGCGG+AGG	0.676240	5.1:-64643712	MS.gene29636:CDS
CAAATGGAAGGCAATATGAG+GGG	0.685202	5.1:-64644746	MS.gene29636:CDS
ATGGCTCCGACAAAGATGAG+AGG	0.686818	5.1:-64644189	MS.gene29636:CDS
GCCATGATCAGTGACAACAT+CGG	0.742566	5.1:+64643081	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACAAAATTAAAATGCAAT+CGG	+	chr5.1:64643589-64643608	None:intergenic	15.0%
!!!	CATATGTGTAATAATTTTTA+AGG	+	chr5.1:64644280-64644299	None:intergenic	15.0%
!!!	TTTGTATAATATTTTTCCAT+GGG	+	chr5.1:64643974-64643993	None:intergenic	15.0%
!!	ATATTATACAAACAAGATAC+AGG	-	chr5.1:64643982-64644001	MS.gene29636:CDS	20.0%
!!	TCATTTATATTATCTATGCT+TGG	+	chr5.1:64644309-64644328	None:intergenic	20.0%
!!!	ATGATATAATCATTGATTGT+AGG	-	chr5.1:64644325-64644344	MS.gene29636:intron	20.0%
!!!	GTTTGTATAATATTTTTCCA+TGG	+	chr5.1:64643975-64643994	None:intergenic	20.0%
!!!	TTCATGTTTTGATGTATAAA+AGG	-	chr5.1:64643546-64643565	MS.gene29636:intron	20.0%
!	AAAAACTTGAGCAATGATAA+AGG	+	chr5.1:64644570-64644589	None:intergenic	25.0%
!	ACTTTACTCATTTCTTCAAT+GGG	+	chr5.1:64644701-64644720	None:intergenic	25.0%
!	AGAAAATGAAAGATGAATCT+AGG	-	chr5.1:64643250-64643269	MS.gene29636:CDS	25.0%
!	AGTTAATAAGATTTGCAACT+AGG	+	chr5.1:64643716-64643735	None:intergenic	25.0%
!	CTTTATATGTCTATATGTTG+CGG	-	chr5.1:64644433-64644452	MS.gene29636:CDS	25.0%
!	GTTGCAAATCTTATTAACTA+CGG	-	chr5.1:64643717-64643736	MS.gene29636:CDS	25.0%
!	TTGCAAATCTTATTAACTAC+GGG	-	chr5.1:64643718-64643737	MS.gene29636:CDS	25.0%
!!	GTATTAGTTTCTTCAACAAA+TGG	-	chr5.1:64643075-64643094	MS.gene29636:CDS	25.0%
!!	TCATTTTCTTGTAAACACTA+GGG	+	chr5.1:64643239-64643258	None:intergenic	25.0%
!!	TTCATTTTCTTGTAAACACT+AGG	+	chr5.1:64643240-64643259	None:intergenic	25.0%
!!	TTTAATTTCAATCTATACCG+TGG	-	chr5.1:64644166-64644185	MS.gene29636:CDS	25.0%
	AAACATGTGACAAACACAAA+TGG	+	chr5.1:64643126-64643145	None:intergenic	30.0%
	AATGGATGGAGAATTTCTTT+GGG	-	chr5.1:64643756-64643775	MS.gene29636:CDS	30.0%
	ATTTGTGTTTGTCACATGTT+TGG	-	chr5.1:64643125-64643144	MS.gene29636:CDS	30.0%
	CACTTTACTCATTTCTTCAA+TGG	+	chr5.1:64644702-64644721	None:intergenic	30.0%
	GGGAAGAATTTAACCAAAAA+TGG	+	chr5.1:64643219-64643238	None:intergenic	30.0%
	TAGTTTCTTCAACAAATGGA+AGG	-	chr5.1:64643079-64643098	MS.gene29636:CDS	30.0%
	TATCCAAATGTTTATTTGCC+AGG	-	chr5.1:64644226-64644245	MS.gene29636:intron	30.0%
	TTCTCAATGATGTGTACAAT+TGG	-	chr5.1:64643687-64643706	MS.gene29636:CDS	30.0%
	TTGAAGAAATGAGTAAAGTG+TGG	-	chr5.1:64644702-64644721	MS.gene29636:CDS	30.0%
	TTTAACCAAAAATGGTTCCA+TGG	+	chr5.1:64643211-64643230	None:intergenic	30.0%
!!	AAACATGATAACGTTGATTC+CGG	+	chr5.1:64644054-64644073	None:intergenic	30.0%
!!!	CTTCTTTTTGGTTATGATCT+TGG	-	chr5.1:64643165-64643184	MS.gene29636:CDS	30.0%
!!!	TGCATAGGATCTTTTTTCTT+AGG	-	chr5.1:64643807-64643826	MS.gene29636:CDS	30.0%
	AAACTTCAAGTGACAAAGCA+TGG	+	chr5.1:64644597-64644616	None:intergenic	35.0%
	AACAAATGGAAGGCAATATG+AGG	-	chr5.1:64643089-64643108	MS.gene29636:CDS	35.0%
	AATGTTGGAATGCTTATCGT+TGG	-	chr5.1:64643459-64643478	MS.gene29636:CDS	35.0%
	ACAAATGGAAGGCAATATGA+GGG	-	chr5.1:64643090-64643109	MS.gene29636:CDS	35.0%
	AGCATGATTGCTATCAAACT+TGG	-	chr5.1:64644359-64644378	MS.gene29636:CDS	35.0%
	AGGAAGATGTGAACAAAGTA+AGG	+	chr5.1:64643311-64643330	None:intergenic	35.0%
	ATGTGAACAAAGTAAGGAGT+TGG	+	chr5.1:64643305-64643324	None:intergenic	35.0%
	CACATCTTCCTTGTATATTG+CGG	-	chr5.1:64643320-64643339	MS.gene29636:CDS	35.0%
	GAATGGATGGAGAATTTCTT+TGG	-	chr5.1:64643755-64643774	MS.gene29636:CDS	35.0%
	GGTTATGATCTTGGTATTAC+AGG	-	chr5.1:64643174-64643193	MS.gene29636:CDS	35.0%
	TACACTGGAACAGACTATTT+AGG	+	chr5.1:64643618-64643637	None:intergenic	35.0%
	TATGATCTTGGTATTACAGG+AGG	-	chr5.1:64643177-64643196	MS.gene29636:CDS	35.0%
	TATTAACGCCGCAATATACA+AGG	+	chr5.1:64643331-64643350	None:intergenic	35.0%
	TCACCTGGCAAATAAACATT+TGG	+	chr5.1:64644232-64644251	None:intergenic	35.0%
	TCCAGTGTATTTGTCTGAAA+TGG	-	chr5.1:64643629-64643648	MS.gene29636:CDS	35.0%
	TGGTGTAGGATATTGTAATC+AGG	-	chr5.1:64643500-64643519	MS.gene29636:intron	35.0%
!	ATGCTTTGTCACTTGAAGTT+TGG	-	chr5.1:64644596-64644615	MS.gene29636:CDS	35.0%
!	TCAAGAGAGCATATTTCACT+AGG	+	chr5.1:64644497-64644516	None:intergenic	35.0%
	AAGATCTCAATGTTTGCAGG+TGG	-	chr5.1:64643393-64643412	MS.gene29636:CDS	40.0%
	ACATTTGGATACCACCTTCA+AGG	+	chr5.1:64644217-64644236	None:intergenic	40.0%
	AGAACTTTGTTCCTTGAAGG+TGG	-	chr5.1:64644203-64644222	MS.gene29636:CDS	40.0%
	AGAGAGCAAAAAGTGAGTTG+AGG	+	chr5.1:64644008-64644027	None:intergenic	40.0%
	AGATCTAATTGATGCTAGCG+AGG	-	chr5.1:64643929-64643948	MS.gene29636:CDS	40.0%
	ATCTATACCGTGGACAAGTT+TGG	-	chr5.1:64644176-64644195	MS.gene29636:CDS	40.0%
	CAAATGGAAGGCAATATGAG+GGG	-	chr5.1:64643091-64643110	MS.gene29636:CDS	40.0%
	CAACATGTTCACTGCAACAT+TGG	+	chr5.1:64644543-64644562	None:intergenic	40.0%
	CCAAACTCTTTGATCGAAAG+AGG	-	chr5.1:64643837-64643856	MS.gene29636:CDS	40.0%
	CCTCTTTCGATCAAAGAGTT+TGG	+	chr5.1:64643840-64643859	None:intergenic	40.0%
	CGAAGAACTTTGTTCCTTGA+AGG	-	chr5.1:64644200-64644219	MS.gene29636:CDS	40.0%
	CTACACCAAAACCAAGCAAT+AGG	+	chr5.1:64643488-64643507	None:intergenic	40.0%
	CTCATGTCTGCAGTAATTAG+CGG	-	chr5.1:64644122-64644141	MS.gene29636:CDS	40.0%
	CTCGTTTACAAAAACCGAAG+CGG	-	chr5.1:64644397-64644416	MS.gene29636:CDS	40.0%
	CTTCCAATCTTGAGAATGGA+TGG	-	chr5.1:64643742-64643761	MS.gene29636:CDS	40.0%
	GATAGCAATCATGCTTCCAA+CGG	+	chr5.1:64644354-64644373	None:intergenic	40.0%
	GCAATGTTGCAAAAGATTCG+CGG	-	chr5.1:64643879-64643898	MS.gene29636:CDS	40.0%
	GCCATTTCAGACAAATACAC+TGG	+	chr5.1:64643633-64643652	None:intergenic	40.0%
	GCTATCAAACTTGGAGTTAG+CGG	-	chr5.1:64644368-64644387	MS.gene29636:CDS	40.0%
	GTAAAGTGTGGAAGTCTCAT+TGG	-	chr5.1:64644714-64644733	MS.gene29636:CDS	40.0%
	GTTTGTCTCAGGAAGAAACA+AGG	+	chr5.1:64644672-64644691	None:intergenic	40.0%
	TATATGTTGCGGCATTTGCA+TGG	-	chr5.1:64644444-64644463	MS.gene29636:CDS	40.0%
	TCCAAACACTCTTGTAGTAG+TGG	+	chr5.1:64643370-64643389	None:intergenic	40.0%
	TCTCCATCCATTCTCAAGAT+TGG	+	chr5.1:64643748-64643767	None:intergenic	40.0%
	TGGAGAATTTCTTTGGGTCT+TGG	-	chr5.1:64643762-64643781	MS.gene29636:CDS	40.0%
!	AATGGTTTGGCTGTCAATGT+TGG	-	chr5.1:64643444-64643463	MS.gene29636:CDS	40.0%
!	ACCTGTCCTTTTCAAAACTC+TGG	-	chr5.1:64644079-64644098	MS.gene29636:CDS	40.0%
!	CCTGTCCTTTTCAAAACTCT+GGG	-	chr5.1:64644080-64644099	MS.gene29636:CDS	40.0%
!	CTTTTCAAAACTCTGGGCTT+TGG	-	chr5.1:64644086-64644105	MS.gene29636:CDS	40.0%
!	GACTTCCATGGAACCATTTT+TGG	-	chr5.1:64643203-64643222	MS.gene29636:CDS	40.0%
!	GGACTTTTCTTCTTCTTTGC+TGG	-	chr5.1:64644617-64644636	MS.gene29636:CDS	40.0%
!!	CGGCATTGATAATGTTGATG+AGG	-	chr5.1:64643899-64643918	MS.gene29636:CDS	40.0%
!!	GCTAAGTTGAAGTTTTCACC+TGG	+	chr5.1:64644247-64644266	None:intergenic	40.0%
!!	TCCACTACTACAAGAGTGTT+TGG	-	chr5.1:64643366-64643385	MS.gene29636:CDS	40.0%
!!!	CAAAGCCCAGAGTTTTGAAA+AGG	+	chr5.1:64644088-64644107	None:intergenic	40.0%
!!!	CTATTGCTTGGTTTTGGTGT+AGG	-	chr5.1:64643486-64643505	MS.gene29636:CDS	40.0%
!!!	TGTGGAAGTCTCATTGGTTT+TGG	-	chr5.1:64644720-64644739	MS.gene29636:CDS	40.0%
	AAACTTGGAGTTAGCGGTGA+AGG	-	chr5.1:64644374-64644393	MS.gene29636:CDS	45.0%
	ACCAAAAAGAAGACCTCCCA+TGG	+	chr5.1:64643157-64643176	None:intergenic	45.0%
	ATCGAAAGAGGCCAAACAGA+AGG	-	chr5.1:64643849-64643868	MS.gene29636:CDS	45.0%
	ATGGGAACGTTGTTTGTCTC+AGG	+	chr5.1:64644683-64644702	None:intergenic	45.0%
	ATGTCTGCAGTAATTAGCGG+AGG	-	chr5.1:64644125-64644144	MS.gene29636:CDS	45.0%
	CCATTCTTCCAACAACTCAC+CGG	-	chr5.1:64644032-64644051	MS.gene29636:CDS	45.0%
	CCTATGCATAACATGACTGC+CGG	+	chr5.1:64643795-64643814	None:intergenic	45.0%
	CGCAAGATCTCAATGTTTGC+AGG	-	chr5.1:64643390-64643409	MS.gene29636:CDS	45.0%
	CTATGCATAACATGACTGCC+GGG	+	chr5.1:64643794-64643813	None:intergenic	45.0%
	GACTAAGAGAAGATCCGCTT+CGG	+	chr5.1:64644414-64644433	None:intergenic	45.0%
	GCCATGATCAGTGACAACAT+CGG	+	chr5.1:64644759-64644778	None:intergenic	45.0%
	GGGACTTCCAATCTTGAGAA+TGG	-	chr5.1:64643738-64643757	MS.gene29636:CDS	45.0%
	TCCGATGTTGTCACTGATCA+TGG	-	chr5.1:64644755-64644774	MS.gene29636:CDS	45.0%
	TCTTCGTCCAAACTTGTCCA+CGG	+	chr5.1:64644186-64644205	None:intergenic	45.0%
	TGTCACTGATCATGGCCATA+AGG	-	chr5.1:64644763-64644782	MS.gene29636:CDS	45.0%
	TTGCCTTAGCTCCTTCTGTT+TGG	+	chr5.1:64643863-64643882	None:intergenic	45.0%
!	ATGAGAGGTGCGCTTAACAT+TGG	-	chr5.1:64643663-64643682	MS.gene29636:CDS	45.0%
!	CATTGATTGTAGGTTGCCGT+TGG	-	chr5.1:64644335-64644354	MS.gene29636:intron	45.0%
!!!	CCCAGAGTTTTGAAAAGGAC+AGG	+	chr5.1:64644083-64644102	None:intergenic	45.0%
!!!	GGTGGCTTGTTTTTCCTTGT+TGG	-	chr5.1:64643411-64643430	MS.gene29636:CDS	45.0%
	ACATGTTTGGTCGCAGCCAT+GGG	-	chr5.1:64643138-64643157	MS.gene29636:CDS	50.0%
	AGCGCACCTCTCATCTTTGT+CGG	+	chr5.1:64643657-64643676	None:intergenic	50.0%
	AGGCCAAACAGAAGGAGCTA+AGG	-	chr5.1:64643857-64643876	MS.gene29636:CDS	50.0%
	ATCGTTGGTCGCCTATTGCT+TGG	-	chr5.1:64643474-64643493	MS.gene29636:CDS	50.0%
	ATGGCTCCGACAAAGATGAG+AGG	-	chr5.1:64643648-64643667	MS.gene29636:CDS	50.0%
	CATTCAGCAACGCACCAACA+AGG	+	chr5.1:64643428-64643447	None:intergenic	50.0%
	CCAAAAAGGTGGAACACCCA+TGG	-	chr5.1:64643955-64643974	MS.gene29636:CDS	50.0%
	CCGGCAGTCATGTTATGCAT+AGG	-	chr5.1:64643792-64643811	MS.gene29636:CDS	50.0%
	CCGGTGAGTTGTTGGAAGAA+TGG	+	chr5.1:64644035-64644054	None:intergenic	50.0%
	CTTGTTGGTGCGTTGCTGAA+TGG	-	chr5.1:64643426-64643445	MS.gene29636:CDS	50.0%
	TACAGGAGGAGTGACTTCCA+TGG	-	chr5.1:64643191-64643210	MS.gene29636:CDS	50.0%
	TAGCGAGGAAGCCAAAAAGG+TGG	-	chr5.1:64643944-64643963	MS.gene29636:CDS	50.0%
	TCTCTTGAAGTCCGATCTGC+AGG	-	chr5.1:64644509-64644528	MS.gene29636:CDS	50.0%
	TGCTAGCGAGGAAGCCAAAA+AGG	-	chr5.1:64643941-64643960	MS.gene29636:CDS	50.0%
	TGGAAGGCAATATGAGGGGA+AGG	-	chr5.1:64643095-64643114	MS.gene29636:CDS	50.0%
	TGGTAGCTTGACCTGCAGAT+CGG	+	chr5.1:64644523-64644542	None:intergenic	50.0%
	TGGTGCGTTGCTGAATGGTT+TGG	-	chr5.1:64643431-64643450	MS.gene29636:CDS	50.0%
!	CCATGGGTGTTCCACCTTTT+TGG	+	chr5.1:64643958-64643977	None:intergenic	50.0%
!	GCCATGGGAGGTCTTCTTTT+TGG	-	chr5.1:64643153-64643172	MS.gene29636:CDS	50.0%
!	GGTCGCCTATTGCTTGGTTT+TGG	-	chr5.1:64643480-64643499	MS.gene29636:CDS	50.0%
!!	CGTTGATTCCGGTGAGTTGT+TGG	+	chr5.1:64644043-64644062	None:intergenic	50.0%
	CACATGTTTGGTCGCAGCCA+TGG	-	chr5.1:64643137-64643156	MS.gene29636:CDS	55.0%
	GCATAACATGACTGCCGGGA+CGG	+	chr5.1:64643790-64643809	None:intergenic	55.0%
	TGCGGCATTTGCATGGTCGT+GGG	-	chr5.1:64644451-64644470	MS.gene29636:CDS	55.0%
	TTGCGGCATTTGCATGGTCG+TGG	-	chr5.1:64644450-64644469	MS.gene29636:CDS	55.0%
	GCGGCATTTGCATGGTCGTG+GGG	-	chr5.1:64644452-64644471	MS.gene29636:CDS	60.0%
	TGTTTGGTCGCAGCCATGGG+AGG	-	chr5.1:64643141-64643160	MS.gene29636:CDS	60.0%
	TTTGGGTCTTGGAGCCGTCC+CGG	-	chr5.1:64643773-64643792	MS.gene29636:CDS	60.0%
	GCATGGTCGTGGGGTGCGTT+AGG	-	chr5.1:64644461-64644480	MS.gene29636:CDS	65.0%
	GGTCGTGGGGTGCGTTAGGA+TGG	-	chr5.1:64644465-64644484	MS.gene29636:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	64643063	64644796	64643063	ID=MS.gene29636
chr5.1	mRNA	64643063	64644796	64643063	ID=MS.gene29636.t1;Parent=MS.gene29636
chr5.1	exon	64644338	64644796	64644338	ID=MS.gene29636.t1.exon1;Parent=MS.gene29636.t1
chr5.1	CDS	64644338	64644796	64644338	ID=cds.MS.gene29636.t1;Parent=MS.gene29636.t1
chr5.1	exon	64643612	64644235	64643612	ID=MS.gene29636.t1.exon2;Parent=MS.gene29636.t1
chr5.1	CDS	64643612	64644235	64643612	ID=cds.MS.gene29636.t1;Parent=MS.gene29636.t1
chr5.1	exon	64643063	64643512	64643063	ID=MS.gene29636.t1.exon3;Parent=MS.gene29636.t1
chr5.1	CDS	64643063	64643512	64643063	ID=cds.MS.gene29636.t1;Parent=MS.gene29636.t1

Gene Sequence

>MS.gene29636

ATGGGTGCAGGAGTATTAGTTTCTTCAACAAATGGAAGGCAATATGAGGGGAAGGTCACACCATTTGTGTTTGTCACATGTTTGGTCGCAGCCATGGGAGGTCTTCTTTTTGGTTATGATCTTGGTATTACAGGAGGAGTGACTTCCATGGAACCATTTTTGGTTAAATTCTTCCCTAGTGTTTACAAGAAAATGAAAGATGAATCTAGGCATGATAGCAATTATTGCAAATTTGACAACCAACTCCTTACTTTGTTCACATCTTCCTTGTATATTGCGGCGTTAATAGCGTCTTTCTTTGCTTCCACTACTACAAGAGTGTTTGGACGCAAGATCTCAATGTTTGCAGGTGGCTTGTTTTTCCTTGTTGGTGCGTTGCTGAATGGTTTGGCTGTCAATGTTGGAATGCTTATCGTTGGTCGCCTATTGCTTGGTTTTGGTGTAGGATATTGTAATCAGGTATAAATTGATCATTCTTGTTCTTTCATGTTTTGATGTATAAAAGGTTGAGAATATTGCGAGACCGATTGCATTTTAATTTTGTTTGTTGTTCCTAAATAGTCTGTTCCAGTGTATTTGTCTGAAATGGCTCCGACAAAGATGAGAGGTGCGCTTAACATTGGATTCTCAATGATGTGTACAATTGGAATCCTAGTTGCAAATCTTATTAACTACGGGACTTCCAATCTTGAGAATGGATGGAGAATTTCTTTGGGTCTTGGAGCCGTCCCGGCAGTCATGTTATGCATAGGATCTTTTTTCTTAGGCGACACACCAAACTCTTTGATCGAAAGAGGCCAAACAGAAGGAGCTAAGGCAATGTTGCAAAAGATTCGCGGCATTGATAATGTTGATGAGGAGTTTCAAGATCTAATTGATGCTAGCGAGGAAGCCAAAAAGGTGGAACACCCATGGAAAAATATTATACAAACAAGATACAGGCCTCAACTCACTTTTTGCTCTCTCATTCCATTCTTCCAACAACTCACCGGAATCAACGTTATCATGTTTTATGCACCTGTCCTTTTCAAAACTCTGGGCTTTGGAAATGATGCTTCTCTCATGTCTGCAGTAATTAGCGGAGGTGTTAACGTTGTTGCTACTTTAATTTCAATCTATACCGTGGACAAGTTTGGACGAAGAACTTTGTTCCTTGAAGGTGGTATCCAAATGTTTATTTGCCAGGTGAAAACTTCAACTTAGCTATAATTAAACCTTAAAAATTATTACACATATGTCGTTTCCAAGCATAGATAATATAAATGATATAATCATTGATTGTAGGTTGCCGTTGGAAGCATGATTGCTATCAAACTTGGAGTTAGCGGTGAAGGCTCGTTTACAAAAACCGAAGCGGATCTTCTCTTAGTCTTTATATGTCTATATGTTGCGGCATTTGCATGGTCGTGGGGTGCGTTAGGATGGTTAGTTCCTAGTGAAATATGCTCTCTTGAAGTCCGATCTGCAGGTCAAGCTACCAATGTTGCAGTGAACATGTTGTTCACCTTTATCATTGCTCAAGTTTTTCTTACCATGCTTTGTCACTTGAAGTTTGGACTTTTCTTCTTCTTTGCTGGCTTTGTGCTCATCATGTCAATTTTCGTTGCCTTGTTTCTTCCTGAGACAAACAACGTTCCCATTGAAGAAATGAGTAAAGTGTGGAAGTCTCATTGGTTTTGGAAAAAGTTTGTTTCCGATGTTGTCACTGATCATGGCCATAAGGCTATTGCTTGA

Protein sequence

>MS.gene29636.t1

MGAGVLVSSTNGRQYEGKVTPFVFVTCLVAAMGGLLFGYDLGITGGVTSMEPFLVKFFPSVYKKMKDESRHDSNYCKFDNQLLTLFTSSLYIAALIASFFASTTTRVFGRKISMFAGGLFFLVGALLNGLAVNVGMLIVGRLLLGFGVGYCNQSVPVYLSEMAPTKMRGALNIGFSMMCTIGILVANLINYGTSNLENGWRISLGLGAVPAVMLCIGSFFLGDTPNSLIERGQTEGAKAMLQKIRGIDNVDEEFQDLIDASEEAKKVEHPWKNIIQTRYRPQLTFCSLIPFFQQLTGINVIMFYAPVLFKTLGFGNDASLMSAVISGGVNVVATLISIYTVDKFGRRTLFLEGGIQMFICQVAVGSMIAIKLGVSGEGSFTKTEADLLLVFICLYVAAFAWSWGALGWLVPSEICSLEVRSAGQATNVAVNMLFTFIIAQVFLTMLCHLKFGLFFFFAGFVLIMSIFVALFLPETNNVPIEEMSKVWKSHWFWKKFVSDVVTDHGHKAIA